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Hierarchy For Package softparsmap
Package Hierarchies:
All Packages
Class Hierarchy
class java.lang.Object
class java.util.AbstractCollection (implements java.util.Collection)
class java.util.AbstractList (implements java.util.List)
class java.util.Vector (implements java.lang.Cloneable, java.util.List, java.util.RandomAccess, java.io.Serializable)
class softparsmap.
ChildSet
(implements java.util.Set)
class softparsmap.
ChildIterator
(implements java.util.Iterator)
class ooc.
Container
class softparsmap.
PropertyFile
class softparsmap.
DataSourceIndexXmlNcbiTaxonomy
(implements java.io.Serializable)
class softparsmap.
Family
(implements java.lang.Comparable)
class softparsmap.
FilePointerPart
(implements java.io.Serializable)
class softparsmap.
InferMutation
class ooc.
LinkedTagInstance
(implements ooc.
Dependencies
)
class softparsmap.
AbstractDataSource
(implements softparsmap.
DataSource
)
class softparsmap.
DataSourceXmlNcbiTaxonomy
class softparsmap.
AbstractEdgeType
(implements softparsmap.
EdgeType
)
class softparsmap.
StandardEdgeType
class softparsmap.
AbstractFamilyGroup
(implements softparsmap.
FamilyGroup
)
class softparsmap.
FamilyGroupTreesInFiles
class softparsmap.
FamilyGroupTreesInFilesInfoPerRow
class softparsmap.
AbstractInparalogous
(implements softparsmap.
Inparalogous
)
class softparsmap.
InparalogousStandard
class softparsmap.
AbstractSequenceData
(implements softparsmap.
SequenceData
)
class softparsmap.
SequenceDataXml
class softparsmap.
AbstractStringNodeConverter
(implements softparsmap.
StringNodeConverter
)
class softparsmap.
StringNodeConverterStringTemplate
class softparsmap.
StringGeneNodeConverterStringTemplate
class softparsmap.
StringGeneNodeConverterDupSpe
class softparsmap.
StringGeneNodeConverterLabel
class softparsmap.
StringGeneNodeConverterNcbiNamesColumn
class softparsmap.
StringGeneNodeConverterSchreiberLabel
class softparsmap.
StringGeneNodeConverterSequenceDataXml
class softparsmap.
StringNodeConverterMapInfo
class softparsmap.
StringGeneNodeConverterSchreiberMapLabel
class softparsmap.
AbstractTreeParser
(implements softparsmap.
TreeParser
)
class softparsmap.
TreeParserDual
class softparsmap.
TreeParserNewick
class softparsmap.
Compute
class softparsmap.
ComputeFamilyGroup
class softparsmap.
ComputeFamilyNumbers
class softparsmap.
ComputeMap
class softparsmap.
ComputeMapInfo
class softparsmap.
ComputeRoot
class softparsmap.
ComputeFamilyGroupPair
class softparsmap.
ComputeCompareGeneTrees
class softparsmap.
PreferredTree
(implements java.util.Comparator)
class softparsmap.
PreferredTreeStandard
class softparsmap.
TreeStructureParserLeafList
(implements softparsmap.
TreeStructureParser
)
class softparsmap.
TreeStructureParserSchreiber
(implements softparsmap.
TreeStructureParser
)
class softparsmap.
TreeStructureParserSchreiberInfoIn
class softparsmap.
Mutation
class softparsmap.
Node
(implements java.lang.Comparable)
class softparsmap.
GeneNode
class softparsmap.
GeneLeaf
(implements java.lang.Comparable)
class softparsmap.
MuNode
class softparsmap.
SpeciesNode
class softparsmap.
SpeciesLeaf
class softparsmap.
PrintTree
class softparsmap.
SortedCollection
(implements java.util.Collection)
class softparsmap.
Split
class softparsmap.
StringTemplate
class java.lang.Throwable (implements java.io.Serializable)
class java.lang.Exception
class java.lang.RuntimeException
class softparsmap.
FatalException
class softparsmap.
TreeTextBlock
class java.io.Writer
class softparsmap.
CharsetFileWriter
Interface Hierarchy
interface softparsmap.
DataSource
interface softparsmap.
EdgeType
interface softparsmap.
FamilyGroup
interface softparsmap.
Inparalogous
interface softparsmap.
SequenceData
interface softparsmap.
StringNodeConverter
interface softparsmap.
TreeParser
interface softparsmap.
TreeStructureParser
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