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java.lang.Objectooc.LinkedTagInstance
softparsmap.AbstractEdgeType
softparsmap.StandardEdgeType
This is a edge type that can me configured within limits. See the def.xml file for more information.
Constructor Summary | |
StandardEdgeType()
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Method Summary | |
java.lang.String |
getName()
Returns the name of the edge type. |
java.lang.String |
getShortName()
Returns a short name of this edge type. |
boolean |
isEdgeWeak(GeneNode node)
Returns true if the edge value for the gene node is weak, else false. |
double |
joinEdges(GeneNode n1,
GeneNode n2)
Returns the edge value retained when joining the edges of the two gene nodes. |
void |
setLimit(double newLimit)
Sets the limit that defines if an edge value is weak or not. |
double |
splitEdge(GeneNode n)
Returns the new edge value after splitting the edge value for the gene node. |
java.lang.String |
toStringAll()
Returns the name, limit, and divide value. |
Methods inherited from class softparsmap.AbstractEdgeType |
getDefaultLeafEdge, getDefaultNodeEdge, getPropertyFile, setupInstance |
Methods inherited from class java.lang.Object |
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public StandardEdgeType()
Method Detail |
public void setLimit(double newLimit)
newLimit
- is the new limitpublic boolean isEdgeWeak(GeneNode node)
EdgeType
node
- the gene node
GeneNode
public double splitEdge(GeneNode n)
EdgeType
n
- the gene node
GeneNode
public double joinEdges(GeneNode n1, GeneNode n2)
EdgeType
n1
- the first gene noden2
- the second gene node
GeneNode
public java.lang.String getName()
EdgeType
public java.lang.String getShortName()
EdgeType
public java.lang.String toStringAll()
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