c4=15.000000 ID 1433_1.pratt2 PA E-x-[DR]-[NST]-L-x(1,3)-S-x(0,2)-Y-K-[DN]-[SV]-x-[GL]-x(2)-[QR]-[AL]-x(2)-[DR]-x-[IL]-[ST]-x(2)-[ET]-[QS]-[DEK] NR MATCHES 55 POS 1 11 1 11 111 1 234 5 6789 0 12 3 45 678 1431_ENTHI 40 EeRNLl--SvaYKNViGakRAswRiISslEQK 1431_LYCES 18 EeRNLl--SvaYKNViGarRAswRiISsvEQK 1431_LYCES 183 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1431_VICFA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1431_VICFA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_ENTHI 40 EeRNLi--SvaYKNVvGsrRAswRiISslEQK 1432_LYCES 44 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1432_LYCES 209 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_VICFA 43 EeRNLl--SvgYKNViGarRAswRiLSsiEQK 1432_VICFA 208 ElDTLneeS--YKDStLimQLlrDnLTlwTSD 1433_CAEEL 203 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_DROME 205 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_ENTHI 37 EeRNLl--SvaYKNViGsrRAswRiITslEQK 1433_HORVU 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_HORVU 211 ElDSLgeeS--YKDStLimQLlrDnLTlwTSD 1433_MAIZE 22 ElDSLgeeS--YKDStLimQLlxDnLTlwTSD 1433_OENHO 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_OENHO 211 ElDTLeeeS--YKDStLimQLlrDnLTlwTSD 1433_ORYSA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_ORYSA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_PEA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_PEA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_SPIOL 164 ElDTLgedS--YKDStLimQLlrDnLTlwTSD 1433_XENLA 193 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 1434_MAIZE 33 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1434_MAIZE 198 ElDTLseeS--YKDStLimQLlhDnLTlwTSD 143B_BOVIN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_HUMAN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_RAT 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143C_ARATH 48 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_RAT 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_RAT 205 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143E_SHEEP 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143F_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143F_HUMAN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_RAT 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143H_ARATH 49 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143H_ARATH 214 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143O_ARATH 43 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143O_ARATH 208 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143P_ARATH 42 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143P_ARATH 207 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143R_ARATH 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143S_HUMAN 39 EeRNLl--SvaYKNVvGgqRAawRvLSsiEQK 143T_HUMAN 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143T_RAT 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143U_ARATH 210 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143Z_HUMAN 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_RAT 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_SHEEP 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH1_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH2_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD RA24_SCHPO 207 ElDSLseeS--YKDStLimQLlrDnLTlwTSD RA25_SCHPO 206 ElDSLseeS--YKDStLimQLlrDnLTlwTSD Fitness without relation: 47.2816 Relation between 12 and 17 giving score 47.7361 Statistics: 47.2816 47.7361 E-x-[DR]-[NST]-L-x(1,3)-S-x(0,2)-Y-K-[DN]-[SV]-x-[GL]-x(2)-[QR]-[AL]-x(2)-[DR]-x-[IL]-[ST]-x(2)-[ET]-[QS]-[DEK],(12,17) A -> (Q), L -> (S), : 47.736114 NR MATCHES 55 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,Q)(A,Q) POS 1 11 1 11 111 1 234 5 6789 0 12 3 45 678 1431_ENTHI 40 EeRNLl--SvaYKNViGakRAswRiISslEQK 1431_LYCES 18 EeRNLl--SvaYKNViGarRAswRiISsvEQK 1431_VICFA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1432_ENTHI 40 EeRNLi--SvaYKNVvGsrRAswRiISslEQK 1432_LYCES 44 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1432_VICFA 43 EeRNLl--SvgYKNViGarRAswRiLSsiEQK 1433_ENTHI 37 EeRNLl--SvaYKNViGsrRAswRiITslEQK 1433_HORVU 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_OENHO 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_ORYSA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_PEA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1434_MAIZE 33 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143C_ARATH 48 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_RAT 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_SHEEP 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143H_ARATH 49 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143O_ARATH 43 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143P_ARATH 42 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143S_HUMAN 39 EeRNLl--SvaYKNVvGgqRAawRvLSsiEQK (L,S)(L,S) POS 1 11 1 11 111 1 234 5 6789 0 12 3 45 678 1431_LYCES 183 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1431_VICFA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_LYCES 209 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_VICFA 208 ElDTLneeS--YKDStLimQLlrDnLTlwTSD 1433_CAEEL 203 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_DROME 205 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_HORVU 211 ElDSLgeeS--YKDStLimQLlrDnLTlwTSD 1433_MAIZE 22 ElDSLgeeS--YKDStLimQLlxDnLTlwTSD 1433_OENHO 211 ElDTLeeeS--YKDStLimQLlrDnLTlwTSD 1433_ORYSA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_PEA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_SPIOL 164 ElDTLgedS--YKDStLimQLlrDnLTlwTSD 1433_XENLA 193 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 1434_MAIZE 198 ElDTLseeS--YKDStLimQLlhDnLTlwTSD 143B_BOVIN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_HUMAN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_RAT 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143E_RAT 205 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143F_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143F_HUMAN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_RAT 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143H_ARATH 214 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143O_ARATH 208 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143P_ARATH 207 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143R_ARATH 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143T_HUMAN 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143T_RAT 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143U_ARATH 210 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143Z_HUMAN 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_RAT 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_SHEEP 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH1_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH2_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD RA24_SCHPO 207 ElDSLseeS--YKDStLimQLlrDnLTlwTSD RA25_SCHPO 206 ElDSLseeS--YKDStLimQLlrDnLTlwTSD ----------------------------------------- ID 1433_1.pratt2 PA E-L-x(3,4)-E-[DER]-[NS]-x(2)-[DS]-[SV]-[AT]-x(4)-[ILV]-[GL]-x(2)-[NR]-[AL]-[AST]-x-[RW]-x(2)-[DEST]-x(3)-[DENQS] NR MATCHES 58 POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1431_ENTHI 36 ELsie-ERNllSVAyknvIGakRASwRiiSsleQ 1431_LYCES 14 ELtve-ERNllSVAyknvIGarRASwRiiSsveQ 1431_LYCES 183 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1431_VICFA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1431_VICFA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1432_ENTHI 36 ELsve-ERNliSVAyknvVGsrRASwRiiSsleQ 1432_LYCES 40 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1432_LYCES 209 ELdtlgEESykDSTlimqLLrdNLTlWtsDnadD 1432_VICFA 208 ELdtlnEESykDSTlimqLLrdNLTlWtsDipeD 1433_CAEEL 203 ELdtlnEDSykDSTlimqLLrdNLTlWtsDvgaE 1433_DROME 205 ELdtlnEDSykDSTlimqLLrdNLTlWtsDtqgD 1433_ENTHI 33 ELsve-ERNllSVAyknvIGsrRASwRiiTsleQ 1433_HORVU 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_HORVU 211 ELdslgEESykDSTlimqLLrdNLTlWtsDnaeE 1433_MAIZE 22 ELdslgEESykDSTlimqLLxdNLTlWtsDtneD 1433_OENHO 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_OENHO 211 ELdtleEESykDSTlimqLLrdNLTlWtsDmqdD 1433_ORYSA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_ORYSA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDnaeD 1433_PEA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_PEA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1433_SPIOL 164 ELdtlgEDSykDSTlimqLLrdNLTlWtsDmqdE 1433_XENLA 193 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgE 1434_MAIZE 29 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1434_MAIZE 198 ELdtlsEESykDSTlimqLLhdNLTlWtsDiseD 143B_BOVIN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_HUMAN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_RAT 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143C_ARATH 44 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143C_ARATH 213 ELdtlgEESykDSTlimqLLrdNLTlWasDmqdD 143E_RAT 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143E_RAT 205 ELdtlsEESykDSTlimqLLrdNLTlWtsDmqgD 143E_SHEEP 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143F_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdE 143F_HUMAN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDlqdE 143G_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143G_RAT 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143H_ARATH 45 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143H_ARATH 214 ELdtlgEESykDSTlimqLLrdNLTlWtsDmrdE 143O_ARATH 39 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143O_ARATH 208 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 143P_ARATH 38 ELsve-ERNllSVAyknvIGarRASwRiiSsieQ 143P_ARATH 207 ELdtlgEESykDSTlimqLLrdNLTlWtsDmtdE 143R_ARATH 42 ELtve-ERNllSVAyknvIGslRAAwRivSsieQ 143S_HUMAN 35 ELsce-ERNllSVAyknvVGgqRAAwRvlSsieQ 143T_HUMAN 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE 143T_RAT 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE 143U_ARATH 210 ELdtlgEESykDSTlimqLLrdNLTlWtsDlndE 143Z_HUMAN 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_RAT 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_SHEEP 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD BMH1_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ BMH1_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDmseS BMH2_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ BMH2_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDiseS RA24_SCHPO 38 ELtve-ERNllSVAyknvIGarRASwRivSsieQ RA24_SCHPO 207 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyS RA25_SCHPO 206 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyN Fitness without relation: 36.8822 Relation between 4 and 14 giving score 37.4828 Statistics: 36.8822 37.4828 E-L-x(3,4)-E-[DER]-[NS]-x(2)-[DS]-[SV]-[AT]-x(4)-[ILV]-[GL]-x(2)-[NR]-[AL]-[AST]-x-[RW]-x(2)-[DEST]-x(3)-[DENQS],(4,14) D -> (W), E -> (W), R -> (R), : 37.482785 NR MATCHES 58 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (D,W)(D,W) POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1433_CAEEL 203 ELdtlnEDSykDSTlimqLLrdNLTlWtsDvgaE 1433_DROME 205 ELdtlnEDSykDSTlimqLLrdNLTlWtsDtqgD 1433_SPIOL 164 ELdtlgEDSykDSTlimqLLrdNLTlWtsDmqdE 143F_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdE 143F_HUMAN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDlqdE 143G_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143G_RAT 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143T_HUMAN 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE 143T_RAT 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE (E,W)(E,W) POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1431_LYCES 183 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1431_VICFA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1432_LYCES 209 ELdtlgEESykDSTlimqLLrdNLTlWtsDnadD 1432_VICFA 208 ELdtlnEESykDSTlimqLLrdNLTlWtsDipeD 1433_HORVU 211 ELdslgEESykDSTlimqLLrdNLTlWtsDnaeE 1433_MAIZE 22 ELdslgEESykDSTlimqLLxdNLTlWtsDtneD 1433_OENHO 211 ELdtleEESykDSTlimqLLrdNLTlWtsDmqdD 1433_ORYSA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDnaeD 1433_PEA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1433_XENLA 193 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgE 1434_MAIZE 198 ELdtlsEESykDSTlimqLLhdNLTlWtsDiseD 143B_BOVIN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_HUMAN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_RAT 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143C_ARATH 213 ELdtlgEESykDSTlimqLLrdNLTlWasDmqdD 143E_RAT 205 ELdtlsEESykDSTlimqLLrdNLTlWtsDmqgD 143H_ARATH 214 ELdtlgEESykDSTlimqLLrdNLTlWtsDmrdE 143O_ARATH 208 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 143P_ARATH 207 ELdtlgEESykDSTlimqLLrdNLTlWtsDmtdE 143U_ARATH 210 ELdtlgEESykDSTlimqLLrdNLTlWtsDlndE 143Z_HUMAN 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_RAT 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_SHEEP 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD BMH1_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDmseS BMH2_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDiseS RA24_SCHPO 207 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyS RA25_SCHPO 206 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyN (R,R)(R,R) POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1431_ENTHI 36 ELsie-ERNllSVAyknvIGakRASwRiiSsleQ 1431_LYCES 14 ELtve-ERNllSVAyknvIGarRASwRiiSsveQ 1431_VICFA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1432_ENTHI 36 ELsve-ERNliSVAyknvVGsrRASwRiiSsleQ 1432_LYCES 40 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_ENTHI 33 ELsve-ERNllSVAyknvIGsrRASwRiiTsleQ 1433_HORVU 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_OENHO 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_ORYSA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_PEA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1434_MAIZE 29 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143C_ARATH 44 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143E_RAT 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143E_SHEEP 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143H_ARATH 45 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143O_ARATH 39 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143P_ARATH 38 ELsve-ERNllSVAyknvIGarRASwRiiSsieQ 143R_ARATH 42 ELtve-ERNllSVAyknvIGslRAAwRivSsieQ 143S_HUMAN 35 ELsce-ERNllSVAyknvVGgqRAAwRvlSsieQ BMH1_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ BMH2_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ RA24_SCHPO 38 ELtve-ERNllSVAyknvIGarRASwRivSsieQ ----------------------------------------- ID 1433_1.pratt2 PA L-[AD]-[EST]-x-[AGNS]-E-x(1,2)-Y-[DEK]-[DE]-x-[ATV]-x(2)-M-[EKQ]-x-[ALV] NR MATCHES 72 POS 11 1 123 45 678 9 01 2 1431_ENTHI 13 LAEqSEr-YDEmVqcMKqV 1431_LYCES 184 LDTlGEesYKDsTliMQlL 1431_VICFA 17 LAEqAEr-YEEmVefMEkV 1431_VICFA 212 LDTlGEesYKDsTliMQlL 1432_ENTHI 13 LAEqSEr-YEEmVqyMKqV 1432_LYCES 210 LDTlGEesYKDsTliMQlL 1432_VICFA 16 LAEqAEr-YEEmVdsMKnV 1432_VICFA 209 LDTlNEesYKDsTliMQlL 1433_CAEEL 14 LAEqAEr-YDDmAaaMKkV 1433_CAEEL 204 LDTlNEdsYKDsTliMQlL 1433_DROME 15 LAEqSEr-YDDmAqaMKsV 1433_DROME 206 LDTlNEdsYKDsTliMQlL 1433_ENTHI 10 LAEqSEr-YDEmVqyMKqV 1433_HORVU 17 LAEqAEr-YEEmVefMEkV 1433_HORVU 212 LDSlGEesYKDsTliMQlL 1433_MAIZE 23 LDSlGEesYKDsTliMQlL 1433_OENHO 17 LAEqAEr-YEEmVefMEkV 1433_ORYSA 17 LAEqAEr-YEEmVefMEkV 1433_ORYSA 212 LDTlGEesYKDsTliMQlL 1433_PEA 17 LAEqAEr-YEEmVefMEkV 1433_PEA 212 LDTlGEesYKDsTliMQlL 1433_SPIOL 165 LDTlGEdsYKDsTliMQlL 1433_XENLA 194 LDTlNEesYKDsTliMQlL 1434_MAIZE 4 LAEqAEr-YEEmVefMEkV 1434_MAIZE 199 LDTlSEesYKDsTliMQlL 143B_BOVIN 12 LAEqAEr-YDDmAaaMKaV 143B_BOVIN 203 LDTlNEesYKDsTliMQlL 143B_HUMAN 12 LAEqAEr-YDDmAaaMKaV 143B_HUMAN 203 LDTlNEesYKDsTliMQlL 143B_RAT 12 LAEqAEr-YDDmAaaMKaV 143B_RAT 203 LDTlNEesYKDsTliMQlL 143C_ARATH 19 LAEqAEr-YEEmVefMEkV 143C_ARATH 214 LDTlGEesYKDsTliMQlL 143E_RAT 13 LAEqAEr-YDEmVesMKkV 143E_RAT 206 LDTlSEesYKDsTliMQlL 143E_SHEEP 13 LAEqAEr-YDEmVesMKkV 143F_BOVIN 12 LAEqAEr-YDDmAsaMKaV 143F_BOVIN 207 LDTlNEdsYKDsTliMQlL 143F_HUMAN 12 LAEqAEr-YDDmAsaMKaV 143F_HUMAN 207 LDTlNEdsYKDsTliMQlL 143G_BOVIN 12 LAEqAEr-YDDmAaaMKnV 143G_BOVIN 207 LDTlNEdsYKDsTliMQlL 143G_RAT 12 LAEqAEr-YDDmAaaMKnV 143G_RAT 207 LDTlNEdsYKDsTliMQlL 143H_ARATH 20 LAEkAEr-YEEmVefMEkV 143H_ARATH 215 LDTlGEesYKDsTliMQlL 143O_ARATH 14 LAEqAEr-YEEmVefMEkV 143O_ARATH 209 LDTlGEesYKDsTliMQlL 143P_ARATH 13 LAEqAEr-YEEmVefMEkV 143P_ARATH 208 LDTlGEesYKDsTliMQlL 143R_ARATH 16 LAEqAEr-YEEmVqfMEqL 143R_ARATH 212 LDTlGEesYKDsTliMQlL 143S_HUMAN 12 LAEqAEr-YEDmAafMKgA 143T_HUMAN 12 LAEqAEr-YDDmAtcMKaV 143T_HUMAN 203 LDTlNEdsYKDsTliMQlL 143T_RAT 12 LAEqAEr-YDDmAtcMKaV 143T_RAT 203 LDTlNEdsYKDsTliMQlL 143U_ARATH 16 LAEqAEr-YEEmVefMEkV 143U_ARATH 211 LDTlGEesYKDsTliMQlL 143Z_HUMAN 12 LAEqAEr-YDDmAacMKsV 143Z_HUMAN 203 LDTlSEesYKDsTliMQlL 143Z_RAT 12 LAEqAEr-YDDmAacMKsV 143Z_RAT 203 LDTlSEesYKDsTliMQlL 143Z_SHEEP 12 LAEqAEr-YDDmAacMKsV 143Z_SHEEP 203 LDTlSEesYKDsTliMQlL BMH1_YEAST 13 LAEqAEr-YEEmVenMKtV BMH1_YEAST 207 LDTlSEesYKDsTliMQlL BMH2_YEAST 13 LAEqAEr-YEEmVenMKaV BMH2_YEAST 207 LDTlSEesYKDsTliMQlL RA24_SCHPO 208 LDSlSEesYKDsTliMQlL RA25_SCHPO 14 LAEqAEr-YEEmVenMKkV RA25_SCHPO 207 LDSlSEesYKDsTliMQlL Fitness without relation: 26.3915 Relation between 2 and 3 giving score 26.9898 Statistics: 26.3915 26.9898 L-[AD]-[EST]-x-[AGNS]-E-x(1,2)-Y-[DEK]-[DE]-x-[ATV]-x(2)-M-[EKQ]-x-[ALV],(2,3) A -> (E), D -> (ST), : 26.989750 NR MATCHES 72 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,E)(A,E) POS 11 1 123 45 678 9 01 2 1431_ENTHI 13 LAEqSEr-YDEmVqcMKqV 1431_VICFA 17 LAEqAEr-YEEmVefMEkV 1432_ENTHI 13 LAEqSEr-YEEmVqyMKqV 1432_VICFA 16 LAEqAEr-YEEmVdsMKnV 1433_CAEEL 14 LAEqAEr-YDDmAaaMKkV 1433_DROME 15 LAEqSEr-YDDmAqaMKsV 1433_ENTHI 10 LAEqSEr-YDEmVqyMKqV 1433_HORVU 17 LAEqAEr-YEEmVefMEkV 1433_OENHO 17 LAEqAEr-YEEmVefMEkV 1433_ORYSA 17 LAEqAEr-YEEmVefMEkV 1433_PEA 17 LAEqAEr-YEEmVefMEkV 1434_MAIZE 4 LAEqAEr-YEEmVefMEkV 143B_BOVIN 12 LAEqAEr-YDDmAaaMKaV 143B_HUMAN 12 LAEqAEr-YDDmAaaMKaV 143B_RAT 12 LAEqAEr-YDDmAaaMKaV 143C_ARATH 19 LAEqAEr-YEEmVefMEkV 143E_RAT 13 LAEqAEr-YDEmVesMKkV 143E_SHEEP 13 LAEqAEr-YDEmVesMKkV 143F_BOVIN 12 LAEqAEr-YDDmAsaMKaV 143F_HUMAN 12 LAEqAEr-YDDmAsaMKaV 143G_BOVIN 12 LAEqAEr-YDDmAaaMKnV 143G_RAT 12 LAEqAEr-YDDmAaaMKnV 143H_ARATH 20 LAEkAEr-YEEmVefMEkV 143O_ARATH 14 LAEqAEr-YEEmVefMEkV 143P_ARATH 13 LAEqAEr-YEEmVefMEkV 143R_ARATH 16 LAEqAEr-YEEmVqfMEqL 143S_HUMAN 12 LAEqAEr-YEDmAafMKgA 143T_HUMAN 12 LAEqAEr-YDDmAtcMKaV 143T_RAT 12 LAEqAEr-YDDmAtcMKaV 143U_ARATH 16 LAEqAEr-YEEmVefMEkV 143Z_HUMAN 12 LAEqAEr-YDDmAacMKsV 143Z_RAT 12 LAEqAEr-YDDmAacMKsV 143Z_SHEEP 12 LAEqAEr-YDDmAacMKsV BMH1_YEAST 13 LAEqAEr-YEEmVenMKtV BMH2_YEAST 13 LAEqAEr-YEEmVenMKaV RA25_SCHPO 14 LAEqAEr-YEEmVenMKkV (D,S)(D,S) POS 11 1 123 45 678 9 01 2 1433_HORVU 212 LDSlGEesYKDsTliMQlL 1433_MAIZE 23 LDSlGEesYKDsTliMQlL RA24_SCHPO 208 LDSlSEesYKDsTliMQlL RA25_SCHPO 207 LDSlSEesYKDsTliMQlL (D,T)(D,T) POS 11 1 123 45 678 9 01 2 1431_LYCES 184 LDTlGEesYKDsTliMQlL 1431_VICFA 212 LDTlGEesYKDsTliMQlL 1432_LYCES 210 LDTlGEesYKDsTliMQlL 1432_VICFA 209 LDTlNEesYKDsTliMQlL 1433_CAEEL 204 LDTlNEdsYKDsTliMQlL 1433_DROME 206 LDTlNEdsYKDsTliMQlL 1433_ORYSA 212 LDTlGEesYKDsTliMQlL 1433_PEA 212 LDTlGEesYKDsTliMQlL 1433_SPIOL 165 LDTlGEdsYKDsTliMQlL 1433_XENLA 194 LDTlNEesYKDsTliMQlL 1434_MAIZE 199 LDTlSEesYKDsTliMQlL 143B_BOVIN 203 LDTlNEesYKDsTliMQlL 143B_HUMAN 203 LDTlNEesYKDsTliMQlL 143B_RAT 203 LDTlNEesYKDsTliMQlL 143C_ARATH 214 LDTlGEesYKDsTliMQlL 143E_RAT 206 LDTlSEesYKDsTliMQlL 143F_BOVIN 207 LDTlNEdsYKDsTliMQlL 143F_HUMAN 207 LDTlNEdsYKDsTliMQlL 143G_BOVIN 207 LDTlNEdsYKDsTliMQlL 143G_RAT 207 LDTlNEdsYKDsTliMQlL 143H_ARATH 215 LDTlGEesYKDsTliMQlL 143O_ARATH 209 LDTlGEesYKDsTliMQlL 143P_ARATH 208 LDTlGEesYKDsTliMQlL 143R_ARATH 212 LDTlGEesYKDsTliMQlL 143T_HUMAN 203 LDTlNEdsYKDsTliMQlL 143T_RAT 203 LDTlNEdsYKDsTliMQlL 143U_ARATH 211 LDTlGEesYKDsTliMQlL 143Z_HUMAN 203 LDTlSEesYKDsTliMQlL 143Z_RAT 203 LDTlSEesYKDsTliMQlL 143Z_SHEEP 203 LDTlSEesYKDsTliMQlL BMH1_YEAST 207 LDTlSEesYKDsTliMQlL BMH2_YEAST 207 LDTlSEesYKDsTliMQlL ----------------------------------------- ID 1433_1.pratt2 PA D-x(2,3)-I-x-[EKQ]-L-x(0,2)-D-[ENST]-[LV]-[GNPST]-x-[EW]-[ST]-x-[DK]-x(2)-[ADGT] NR MATCHES 54 POS 1 1 1 1 2 34 5678 90 1 2 1431_ENTHI 216 DstlImQLlrDNLTlWTsDacD 1431_LYCES 178 Dea-IaEL--DTLGeESyKdsT 1431_LYCES 194 DstlImQLlrDNLTlWTsDmqD 1431_VICFA 206 Dea-IaEL--DTLGeESyKdsT 1431_VICFA 222 DstlImQLlrDNLTlWTsDmqD 1432_ENTHI 199 Dea-IqKL--DEVPeESyKesT 1432_LYCES 204 Dea-IsEL--DTLGeESyKdsT 1432_LYCES 220 DstlImQLlrDNLTlWTsDnaD 1432_VICFA 203 Dea-IsEL--DTLNeESyKdsT 1433_CAEEL 214 DstlImQLlrDNLTlWTsDvgA 1433_DROME 216 DstlImQLlrDNLTlWTsDtqG 1433_ENTHI 213 DstlImQLlrDNLTlWTsDtaD 1433_HORVU 206 Dea-IaEL--DSLGeESyKdsT 1433_MAIZE 17 Dea-IsEL--DSLGeESyKdsT 1433_OENHO 222 DstlImQLlrDNLTlWTsDmqD 1433_ORYSA 206 Dda-IaEL--DTLGeESyKdsT 1433_PEA 206 Dea-IaEL--DTLGeESyKdsT 1433_PEA 222 DstlImQLlrDNLTlWTsDmqD 1433_SPIOL 175 DstlImQLlrDNLTlWTsDmqD 1433_XENLA 188 Dea-IrEL--DTLNeESyKdsT 1434_MAIZE 193 Dea-IsEL--DTLSeESyKdsT 143B_BOVIN 197 Dea-IaEL--DTLNeESyKdsT 143B_HUMAN 197 Dea-IaEL--DTLNeESyKdsT 143B_RAT 197 Dea-IaEL--DTLNeESyKdsT 143C_ARATH 208 Dea-IaEL--DTLGeESyKdsT 143E_RAT 200 Dda-IaEL--DTLSeESyKdsT 143E_RAT 216 DstlImQLlrDNLTlWTsDmqG 143E_SHEEP 216 DstlImQLlrDNLTlWTsDmqG 143F_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143F_HUMAN 217 DstlImQLlrDNLTlWTsDlqD 143G_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143G_RAT 217 DstlImQLlrDNLTlWTsDqqD 143H_ARATH 209 Dea-IaEL--DTLGeESyKdsT 143H_ARATH 225 DstlImQLlrDNLTlWTsDmrD 143O_ARATH 203 Dea-IaEL--DTLGeESyKdsT 143O_ARATH 219 DstlImQLlrDNLTlWTsDmqD 143P_ARATH 202 Dda-IaEL--DTLGeESyKdsT 143P_ARATH 218 DstlImQLlrDNLTlWTsDmtD 143R_ARATH 222 DstlImQLlrDNLTlWTsDyaG 143S_HUMAN 215 DstlImQLlrDNLTlWTaDnaG 143T_HUMAN 213 DstlImQLlrDNLTlWTsDsaG 143T_RAT 213 DstlImQLlrDNLTlWTsDsaG 143U_ARATH 205 Dea-IsEL--DTLGeESyKdsT 143U_ARATH 221 DstlImQLlrDNLTlWTsDlnD 143Z_HUMAN 197 Dea-IaEL--DTLSeESyKdsT 143Z_HUMAN 213 DstlImQLlrDNLTlWTsDtqG 143Z_RAT 197 Dea-IaEL--DTLSeESyKdsT 143Z_RAT 213 DstlImQLlrDNLTlWTsDtqG 143Z_SHEEP 197 Dea-IaEL--DTLSeESyKdsT 143Z_SHEEP 213 DstlImQLlrDNLTlWTsDtqG BMH1_YEAST 201 Dda-IaEL--DTLSeESyKdsT BMH2_YEAST 201 Dda-IaEL--DTLSeESyKdsT RA24_SCHPO 202 Dea-IsEL--DSLSeESyKdsT RA25_SCHPO 201 Dea-IsEL--DSLSeESyKdsT Fitness without relation: 25.9939 Relation between 10 and 11 giving score 26.4330 Statistics: 25.9939 26.4330 D-x(2,3)-I-x-[EKQ]-L-x(0,2)-D-[ENST]-[LV]-[GNPST]-x-[EW]-[ST]-x-[DK]-x(2)-[ADGT],(10,11) S -> (K), T -> (D), : 26.432988 NR MATCHES 54 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (S,K)(S,K) POS 1 1 1 1 2 34 5678 90 1 2 1431_LYCES 178 Dea-IaEL--DTLGeESyKdsT 1431_VICFA 206 Dea-IaEL--DTLGeESyKdsT 1432_ENTHI 199 Dea-IqKL--DEVPeESyKesT 1432_LYCES 204 Dea-IsEL--DTLGeESyKdsT 1432_VICFA 203 Dea-IsEL--DTLNeESyKdsT 1433_HORVU 206 Dea-IaEL--DSLGeESyKdsT 1433_MAIZE 17 Dea-IsEL--DSLGeESyKdsT 1433_ORYSA 206 Dda-IaEL--DTLGeESyKdsT 1433_PEA 206 Dea-IaEL--DTLGeESyKdsT 1433_XENLA 188 Dea-IrEL--DTLNeESyKdsT 1434_MAIZE 193 Dea-IsEL--DTLSeESyKdsT 143B_BOVIN 197 Dea-IaEL--DTLNeESyKdsT 143B_HUMAN 197 Dea-IaEL--DTLNeESyKdsT 143B_RAT 197 Dea-IaEL--DTLNeESyKdsT 143C_ARATH 208 Dea-IaEL--DTLGeESyKdsT 143E_RAT 200 Dda-IaEL--DTLSeESyKdsT 143H_ARATH 209 Dea-IaEL--DTLGeESyKdsT 143O_ARATH 203 Dea-IaEL--DTLGeESyKdsT 143P_ARATH 202 Dda-IaEL--DTLGeESyKdsT 143U_ARATH 205 Dea-IsEL--DTLGeESyKdsT 143Z_HUMAN 197 Dea-IaEL--DTLSeESyKdsT 143Z_RAT 197 Dea-IaEL--DTLSeESyKdsT 143Z_SHEEP 197 Dea-IaEL--DTLSeESyKdsT BMH1_YEAST 201 Dda-IaEL--DTLSeESyKdsT BMH2_YEAST 201 Dda-IaEL--DTLSeESyKdsT RA24_SCHPO 202 Dea-IsEL--DSLSeESyKdsT RA25_SCHPO 201 Dea-IsEL--DSLSeESyKdsT (T,D)(T,D) POS 1 1 1 1 2 34 5678 90 1 2 1431_ENTHI 216 DstlImQLlrDNLTlWTsDacD 1431_LYCES 194 DstlImQLlrDNLTlWTsDmqD 1431_VICFA 222 DstlImQLlrDNLTlWTsDmqD 1432_LYCES 220 DstlImQLlrDNLTlWTsDnaD 1433_CAEEL 214 DstlImQLlrDNLTlWTsDvgA 1433_DROME 216 DstlImQLlrDNLTlWTsDtqG 1433_ENTHI 213 DstlImQLlrDNLTlWTsDtaD 1433_OENHO 222 DstlImQLlrDNLTlWTsDmqD 1433_PEA 222 DstlImQLlrDNLTlWTsDmqD 1433_SPIOL 175 DstlImQLlrDNLTlWTsDmqD 143E_RAT 216 DstlImQLlrDNLTlWTsDmqG 143E_SHEEP 216 DstlImQLlrDNLTlWTsDmqG 143F_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143F_HUMAN 217 DstlImQLlrDNLTlWTsDlqD 143G_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143G_RAT 217 DstlImQLlrDNLTlWTsDqqD 143H_ARATH 225 DstlImQLlrDNLTlWTsDmrD 143O_ARATH 219 DstlImQLlrDNLTlWTsDmqD 143P_ARATH 218 DstlImQLlrDNLTlWTsDmtD 143R_ARATH 222 DstlImQLlrDNLTlWTsDyaG 143S_HUMAN 215 DstlImQLlrDNLTlWTaDnaG 143T_HUMAN 213 DstlImQLlrDNLTlWTsDsaG 143T_RAT 213 DstlImQLlrDNLTlWTsDsaG 143U_ARATH 221 DstlImQLlrDNLTlWTsDlnD 143Z_HUMAN 213 DstlImQLlrDNLTlWTsDtqG 143Z_RAT 213 DstlImQLlrDNLTlWTsDtqG 143Z_SHEEP 213 DstlImQLlrDNLTlWTsDtqG ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- 1433_2.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID 1433_2.pratt2 PA E-x-[DR]-[NST]-L-x(1,3)-S-x(0,2)-Y-K-[DN]-[SV]-x-[GL]-x(2)-[QR]-[AL]-x(2)-[DR]-x-[IL]-[ST]-x(2)-[ET]-[QS]-[DEK] NR MATCHES 55 POS 1 11 1 11 111 1 234 5 6789 0 12 3 45 678 1431_ENTHI 40 EeRNLl--SvaYKNViGakRAswRiISslEQK 1431_LYCES 18 EeRNLl--SvaYKNViGarRAswRiISsvEQK 1431_LYCES 183 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1431_VICFA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1431_VICFA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_ENTHI 40 EeRNLi--SvaYKNVvGsrRAswRiISslEQK 1432_LYCES 44 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1432_LYCES 209 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_VICFA 43 EeRNLl--SvgYKNViGarRAswRiLSsiEQK 1432_VICFA 208 ElDTLneeS--YKDStLimQLlrDnLTlwTSD 1433_CAEEL 203 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_DROME 205 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_ENTHI 37 EeRNLl--SvaYKNViGsrRAswRiITslEQK 1433_HORVU 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_HORVU 211 ElDSLgeeS--YKDStLimQLlrDnLTlwTSD 1433_MAIZE 22 ElDSLgeeS--YKDStLimQLlxDnLTlwTSD 1433_OENHO 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_OENHO 211 ElDTLeeeS--YKDStLimQLlrDnLTlwTSD 1433_ORYSA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_ORYSA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_PEA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_PEA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_SPIOL 164 ElDTLgedS--YKDStLimQLlrDnLTlwTSD 1433_XENLA 193 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 1434_MAIZE 33 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1434_MAIZE 198 ElDTLseeS--YKDStLimQLlhDnLTlwTSD 143B_BOVIN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_HUMAN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_RAT 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143C_ARATH 48 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_RAT 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_RAT 205 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143E_SHEEP 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143F_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143F_HUMAN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_RAT 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143H_ARATH 49 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143H_ARATH 214 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143O_ARATH 43 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143O_ARATH 208 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143P_ARATH 42 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143P_ARATH 207 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143R_ARATH 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143S_HUMAN 39 EeRNLl--SvaYKNVvGgqRAawRvLSsiEQK 143T_HUMAN 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143T_RAT 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143U_ARATH 210 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143Z_HUMAN 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_RAT 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_SHEEP 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH1_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH2_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD RA24_SCHPO 207 ElDSLseeS--YKDStLimQLlrDnLTlwTSD RA25_SCHPO 206 ElDSLseeS--YKDStLimQLlrDnLTlwTSD Fitness without relation: 47.2816 Relation between 12 and 17 giving score 47.7361 Statistics: 47.2816 47.7361 E-x-[DR]-[NST]-L-x(1,3)-S-x(0,2)-Y-K-[DN]-[SV]-x-[GL]-x(2)-[QR]-[AL]-x(2)-[DR]-x-[IL]-[ST]-x(2)-[ET]-[QS]-[DEK],(12,17) A -> (Q), L -> (S), : 47.736114 NR MATCHES 55 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,Q)(A,Q) POS 1 11 1 11 111 1 234 5 6789 0 12 3 45 678 1431_ENTHI 40 EeRNLl--SvaYKNViGakRAswRiISslEQK 1431_LYCES 18 EeRNLl--SvaYKNViGarRAswRiISsvEQK 1431_VICFA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1432_ENTHI 40 EeRNLi--SvaYKNVvGsrRAswRiISslEQK 1432_LYCES 44 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1432_VICFA 43 EeRNLl--SvgYKNViGarRAswRiLSsiEQK 1433_ENTHI 37 EeRNLl--SvaYKNViGsrRAswRiITslEQK 1433_HORVU 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_OENHO 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_ORYSA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1433_PEA 46 EeRNLl--SvaYKNViGarRAswRiISsiEQK 1434_MAIZE 33 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143C_ARATH 48 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_RAT 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143E_SHEEP 40 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143H_ARATH 49 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143O_ARATH 43 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143P_ARATH 42 EeRNLl--SvaYKNViGarRAswRiISsiEQK 143S_HUMAN 39 EeRNLl--SvaYKNVvGgqRAawRvLSsiEQK (L,S)(L,S) POS 1 11 1 11 111 1 234 5 6789 0 12 3 45 678 1431_LYCES 183 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1431_VICFA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_LYCES 209 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1432_VICFA 208 ElDTLneeS--YKDStLimQLlrDnLTlwTSD 1433_CAEEL 203 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_DROME 205 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 1433_HORVU 211 ElDSLgeeS--YKDStLimQLlrDnLTlwTSD 1433_MAIZE 22 ElDSLgeeS--YKDStLimQLlxDnLTlwTSD 1433_OENHO 211 ElDTLeeeS--YKDStLimQLlrDnLTlwTSD 1433_ORYSA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_PEA 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 1433_SPIOL 164 ElDTLgedS--YKDStLimQLlrDnLTlwTSD 1433_XENLA 193 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 1434_MAIZE 198 ElDTLseeS--YKDStLimQLlhDnLTlwTSD 143B_BOVIN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_HUMAN 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143B_RAT 202 ElDTLneeS--YKDStLimQLlrDnLTlwTSE 143E_RAT 205 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143F_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143F_HUMAN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_BOVIN 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143G_RAT 206 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143H_ARATH 214 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143O_ARATH 208 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143P_ARATH 207 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143R_ARATH 211 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143T_HUMAN 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143T_RAT 202 ElDTLnedS--YKDStLimQLlrDnLTlwTSD 143U_ARATH 210 ElDTLgeeS--YKDStLimQLlrDnLTlwTSD 143Z_HUMAN 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_RAT 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD 143Z_SHEEP 202 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH1_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD BMH2_YEAST 206 ElDTLseeS--YKDStLimQLlrDnLTlwTSD RA24_SCHPO 207 ElDSLseeS--YKDStLimQLlrDnLTlwTSD RA25_SCHPO 206 ElDSLseeS--YKDStLimQLlrDnLTlwTSD ----------------------------------------- ID 1433_2.pratt2 PA E-L-x(3,4)-E-[DER]-[NS]-x(2)-[DS]-[SV]-[AT]-x(4)-[ILV]-[GL]-x(2)-[NR]-[AL]-[AST]-x-[RW]-x(2)-[DEST]-x(3)-[DENQS] NR MATCHES 58 POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1431_ENTHI 36 ELsie-ERNllSVAyknvIGakRASwRiiSsleQ 1431_LYCES 14 ELtve-ERNllSVAyknvIGarRASwRiiSsveQ 1431_LYCES 183 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1431_VICFA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1431_VICFA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1432_ENTHI 36 ELsve-ERNliSVAyknvVGsrRASwRiiSsleQ 1432_LYCES 40 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1432_LYCES 209 ELdtlgEESykDSTlimqLLrdNLTlWtsDnadD 1432_VICFA 208 ELdtlnEESykDSTlimqLLrdNLTlWtsDipeD 1433_CAEEL 203 ELdtlnEDSykDSTlimqLLrdNLTlWtsDvgaE 1433_DROME 205 ELdtlnEDSykDSTlimqLLrdNLTlWtsDtqgD 1433_ENTHI 33 ELsve-ERNllSVAyknvIGsrRASwRiiTsleQ 1433_HORVU 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_HORVU 211 ELdslgEESykDSTlimqLLrdNLTlWtsDnaeE 1433_MAIZE 22 ELdslgEESykDSTlimqLLxdNLTlWtsDtneD 1433_OENHO 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_OENHO 211 ELdtleEESykDSTlimqLLrdNLTlWtsDmqdD 1433_ORYSA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_ORYSA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDnaeD 1433_PEA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_PEA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1433_SPIOL 164 ELdtlgEDSykDSTlimqLLrdNLTlWtsDmqdE 1433_XENLA 193 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgE 1434_MAIZE 29 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1434_MAIZE 198 ELdtlsEESykDSTlimqLLhdNLTlWtsDiseD 143B_BOVIN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_HUMAN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_RAT 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143C_ARATH 44 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143C_ARATH 213 ELdtlgEESykDSTlimqLLrdNLTlWasDmqdD 143E_RAT 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143E_RAT 205 ELdtlsEESykDSTlimqLLrdNLTlWtsDmqgD 143E_SHEEP 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143F_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdE 143F_HUMAN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDlqdE 143G_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143G_RAT 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143H_ARATH 45 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143H_ARATH 214 ELdtlgEESykDSTlimqLLrdNLTlWtsDmrdE 143O_ARATH 39 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143O_ARATH 208 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 143P_ARATH 38 ELsve-ERNllSVAyknvIGarRASwRiiSsieQ 143P_ARATH 207 ELdtlgEESykDSTlimqLLrdNLTlWtsDmtdE 143R_ARATH 42 ELtve-ERNllSVAyknvIGslRAAwRivSsieQ 143S_HUMAN 35 ELsce-ERNllSVAyknvVGgqRAAwRvlSsieQ 143T_HUMAN 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE 143T_RAT 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE 143U_ARATH 210 ELdtlgEESykDSTlimqLLrdNLTlWtsDlndE 143Z_HUMAN 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_RAT 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_SHEEP 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD BMH1_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ BMH1_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDmseS BMH2_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ BMH2_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDiseS RA24_SCHPO 38 ELtve-ERNllSVAyknvIGarRASwRivSsieQ RA24_SCHPO 207 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyS RA25_SCHPO 206 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyN Fitness without relation: 36.8822 Relation between 4 and 14 giving score 37.4828 Statistics: 36.8822 37.4828 E-L-x(3,4)-E-[DER]-[NS]-x(2)-[DS]-[SV]-[AT]-x(4)-[ILV]-[GL]-x(2)-[NR]-[AL]-[AST]-x-[RW]-x(2)-[DEST]-x(3)-[DENQS],(4,14) D -> (W), E -> (W), R -> (R), : 37.482785 NR MATCHES 58 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (D,W)(D,W) POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1433_CAEEL 203 ELdtlnEDSykDSTlimqLLrdNLTlWtsDvgaE 1433_DROME 205 ELdtlnEDSykDSTlimqLLrdNLTlWtsDtqgD 1433_SPIOL 164 ELdtlgEDSykDSTlimqLLrdNLTlWtsDmqdE 143F_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdE 143F_HUMAN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDlqdE 143G_BOVIN 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143G_RAT 206 ELdtlnEDSykDSTlimqLLrdNLTlWtsDqqdD 143T_HUMAN 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE 143T_RAT 202 ELdtlnEDSykDSTlimqLLrdNLTlWtsDsagE (E,W)(E,W) POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1431_LYCES 183 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1431_VICFA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1432_LYCES 209 ELdtlgEESykDSTlimqLLrdNLTlWtsDnadD 1432_VICFA 208 ELdtlnEESykDSTlimqLLrdNLTlWtsDipeD 1433_HORVU 211 ELdslgEESykDSTlimqLLrdNLTlWtsDnaeE 1433_MAIZE 22 ELdslgEESykDSTlimqLLxdNLTlWtsDtneD 1433_OENHO 211 ELdtleEESykDSTlimqLLrdNLTlWtsDmqdD 1433_ORYSA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDnaeD 1433_PEA 211 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 1433_XENLA 193 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgE 1434_MAIZE 198 ELdtlsEESykDSTlimqLLhdNLTlWtsDiseD 143B_BOVIN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_HUMAN 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143B_RAT 202 ELdtlnEESykDSTlimqLLrdNLTlWtsEnqgD 143C_ARATH 213 ELdtlgEESykDSTlimqLLrdNLTlWasDmqdD 143E_RAT 205 ELdtlsEESykDSTlimqLLrdNLTlWtsDmqgD 143H_ARATH 214 ELdtlgEESykDSTlimqLLrdNLTlWtsDmrdE 143O_ARATH 208 ELdtlgEESykDSTlimqLLrdNLTlWtsDmqdD 143P_ARATH 207 ELdtlgEESykDSTlimqLLrdNLTlWtsDmtdE 143U_ARATH 210 ELdtlgEESykDSTlimqLLrdNLTlWtsDlndE 143Z_HUMAN 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_RAT 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD 143Z_SHEEP 202 ELdtlsEESykDSTlimqLLrdNLTlWtsDtqgD BMH1_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDmseS BMH2_YEAST 206 ELdtlsEESykDSTlimqLLrdNLTlWtsDiseS RA24_SCHPO 207 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyS RA25_SCHPO 206 ELdslsEESykDSTlimqLLrdNLTlWtsDaeyN (R,R)(R,R) POS 1 111 1 1 1 12 345 678 90 123 4 5 6 1431_ENTHI 36 ELsie-ERNllSVAyknvIGakRASwRiiSsleQ 1431_LYCES 14 ELtve-ERNllSVAyknvIGarRASwRiiSsveQ 1431_VICFA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1432_ENTHI 36 ELsve-ERNliSVAyknvVGsrRASwRiiSsleQ 1432_LYCES 40 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_ENTHI 33 ELsve-ERNllSVAyknvIGsrRASwRiiTsleQ 1433_HORVU 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_OENHO 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_ORYSA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1433_PEA 42 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 1434_MAIZE 29 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143C_ARATH 44 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143E_RAT 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143E_SHEEP 36 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143H_ARATH 45 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143O_ARATH 39 ELtve-ERNllSVAyknvIGarRASwRiiSsieQ 143P_ARATH 38 ELsve-ERNllSVAyknvIGarRASwRiiSsieQ 143R_ARATH 42 ELtve-ERNllSVAyknvIGslRAAwRivSsieQ 143S_HUMAN 35 ELsce-ERNllSVAyknvVGgqRAAwRvlSsieQ BMH1_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ BMH2_YEAST 36 ELsve-ERNllSVAyknvIGarRASwRivSsieQ RA24_SCHPO 38 ELtve-ERNllSVAyknvIGarRASwRivSsieQ ----------------------------------------- ID 1433_2.pratt2 PA L-[AD]-[EST]-x-[AGNS]-E-x(1,2)-Y-[DEK]-[DE]-x-[ATV]-x(2)-M-[EKQ]-x-[ALV] NR MATCHES 72 POS 11 1 123 45 678 9 01 2 1431_ENTHI 13 LAEqSEr-YDEmVqcMKqV 1431_LYCES 184 LDTlGEesYKDsTliMQlL 1431_VICFA 17 LAEqAEr-YEEmVefMEkV 1431_VICFA 212 LDTlGEesYKDsTliMQlL 1432_ENTHI 13 LAEqSEr-YEEmVqyMKqV 1432_LYCES 210 LDTlGEesYKDsTliMQlL 1432_VICFA 16 LAEqAEr-YEEmVdsMKnV 1432_VICFA 209 LDTlNEesYKDsTliMQlL 1433_CAEEL 14 LAEqAEr-YDDmAaaMKkV 1433_CAEEL 204 LDTlNEdsYKDsTliMQlL 1433_DROME 15 LAEqSEr-YDDmAqaMKsV 1433_DROME 206 LDTlNEdsYKDsTliMQlL 1433_ENTHI 10 LAEqSEr-YDEmVqyMKqV 1433_HORVU 17 LAEqAEr-YEEmVefMEkV 1433_HORVU 212 LDSlGEesYKDsTliMQlL 1433_MAIZE 23 LDSlGEesYKDsTliMQlL 1433_OENHO 17 LAEqAEr-YEEmVefMEkV 1433_ORYSA 17 LAEqAEr-YEEmVefMEkV 1433_ORYSA 212 LDTlGEesYKDsTliMQlL 1433_PEA 17 LAEqAEr-YEEmVefMEkV 1433_PEA 212 LDTlGEesYKDsTliMQlL 1433_SPIOL 165 LDTlGEdsYKDsTliMQlL 1433_XENLA 194 LDTlNEesYKDsTliMQlL 1434_MAIZE 4 LAEqAEr-YEEmVefMEkV 1434_MAIZE 199 LDTlSEesYKDsTliMQlL 143B_BOVIN 12 LAEqAEr-YDDmAaaMKaV 143B_BOVIN 203 LDTlNEesYKDsTliMQlL 143B_HUMAN 12 LAEqAEr-YDDmAaaMKaV 143B_HUMAN 203 LDTlNEesYKDsTliMQlL 143B_RAT 12 LAEqAEr-YDDmAaaMKaV 143B_RAT 203 LDTlNEesYKDsTliMQlL 143C_ARATH 19 LAEqAEr-YEEmVefMEkV 143C_ARATH 214 LDTlGEesYKDsTliMQlL 143E_RAT 13 LAEqAEr-YDEmVesMKkV 143E_RAT 206 LDTlSEesYKDsTliMQlL 143E_SHEEP 13 LAEqAEr-YDEmVesMKkV 143F_BOVIN 12 LAEqAEr-YDDmAsaMKaV 143F_BOVIN 207 LDTlNEdsYKDsTliMQlL 143F_HUMAN 12 LAEqAEr-YDDmAsaMKaV 143F_HUMAN 207 LDTlNEdsYKDsTliMQlL 143G_BOVIN 12 LAEqAEr-YDDmAaaMKnV 143G_BOVIN 207 LDTlNEdsYKDsTliMQlL 143G_RAT 12 LAEqAEr-YDDmAaaMKnV 143G_RAT 207 LDTlNEdsYKDsTliMQlL 143H_ARATH 20 LAEkAEr-YEEmVefMEkV 143H_ARATH 215 LDTlGEesYKDsTliMQlL 143O_ARATH 14 LAEqAEr-YEEmVefMEkV 143O_ARATH 209 LDTlGEesYKDsTliMQlL 143P_ARATH 13 LAEqAEr-YEEmVefMEkV 143P_ARATH 208 LDTlGEesYKDsTliMQlL 143R_ARATH 16 LAEqAEr-YEEmVqfMEqL 143R_ARATH 212 LDTlGEesYKDsTliMQlL 143S_HUMAN 12 LAEqAEr-YEDmAafMKgA 143T_HUMAN 12 LAEqAEr-YDDmAtcMKaV 143T_HUMAN 203 LDTlNEdsYKDsTliMQlL 143T_RAT 12 LAEqAEr-YDDmAtcMKaV 143T_RAT 203 LDTlNEdsYKDsTliMQlL 143U_ARATH 16 LAEqAEr-YEEmVefMEkV 143U_ARATH 211 LDTlGEesYKDsTliMQlL 143Z_HUMAN 12 LAEqAEr-YDDmAacMKsV 143Z_HUMAN 203 LDTlSEesYKDsTliMQlL 143Z_RAT 12 LAEqAEr-YDDmAacMKsV 143Z_RAT 203 LDTlSEesYKDsTliMQlL 143Z_SHEEP 12 LAEqAEr-YDDmAacMKsV 143Z_SHEEP 203 LDTlSEesYKDsTliMQlL BMH1_YEAST 13 LAEqAEr-YEEmVenMKtV BMH1_YEAST 207 LDTlSEesYKDsTliMQlL BMH2_YEAST 13 LAEqAEr-YEEmVenMKaV BMH2_YEAST 207 LDTlSEesYKDsTliMQlL RA24_SCHPO 208 LDSlSEesYKDsTliMQlL RA25_SCHPO 14 LAEqAEr-YEEmVenMKkV RA25_SCHPO 207 LDSlSEesYKDsTliMQlL Fitness without relation: 26.3915 Relation between 2 and 3 giving score 26.9898 Statistics: 26.3915 26.9898 L-[AD]-[EST]-x-[AGNS]-E-x(1,2)-Y-[DEK]-[DE]-x-[ATV]-x(2)-M-[EKQ]-x-[ALV],(2,3) A -> (E), D -> (ST), : 26.989750 NR MATCHES 72 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,E)(A,E) POS 11 1 123 45 678 9 01 2 1431_ENTHI 13 LAEqSEr-YDEmVqcMKqV 1431_VICFA 17 LAEqAEr-YEEmVefMEkV 1432_ENTHI 13 LAEqSEr-YEEmVqyMKqV 1432_VICFA 16 LAEqAEr-YEEmVdsMKnV 1433_CAEEL 14 LAEqAEr-YDDmAaaMKkV 1433_DROME 15 LAEqSEr-YDDmAqaMKsV 1433_ENTHI 10 LAEqSEr-YDEmVqyMKqV 1433_HORVU 17 LAEqAEr-YEEmVefMEkV 1433_OENHO 17 LAEqAEr-YEEmVefMEkV 1433_ORYSA 17 LAEqAEr-YEEmVefMEkV 1433_PEA 17 LAEqAEr-YEEmVefMEkV 1434_MAIZE 4 LAEqAEr-YEEmVefMEkV 143B_BOVIN 12 LAEqAEr-YDDmAaaMKaV 143B_HUMAN 12 LAEqAEr-YDDmAaaMKaV 143B_RAT 12 LAEqAEr-YDDmAaaMKaV 143C_ARATH 19 LAEqAEr-YEEmVefMEkV 143E_RAT 13 LAEqAEr-YDEmVesMKkV 143E_SHEEP 13 LAEqAEr-YDEmVesMKkV 143F_BOVIN 12 LAEqAEr-YDDmAsaMKaV 143F_HUMAN 12 LAEqAEr-YDDmAsaMKaV 143G_BOVIN 12 LAEqAEr-YDDmAaaMKnV 143G_RAT 12 LAEqAEr-YDDmAaaMKnV 143H_ARATH 20 LAEkAEr-YEEmVefMEkV 143O_ARATH 14 LAEqAEr-YEEmVefMEkV 143P_ARATH 13 LAEqAEr-YEEmVefMEkV 143R_ARATH 16 LAEqAEr-YEEmVqfMEqL 143S_HUMAN 12 LAEqAEr-YEDmAafMKgA 143T_HUMAN 12 LAEqAEr-YDDmAtcMKaV 143T_RAT 12 LAEqAEr-YDDmAtcMKaV 143U_ARATH 16 LAEqAEr-YEEmVefMEkV 143Z_HUMAN 12 LAEqAEr-YDDmAacMKsV 143Z_RAT 12 LAEqAEr-YDDmAacMKsV 143Z_SHEEP 12 LAEqAEr-YDDmAacMKsV BMH1_YEAST 13 LAEqAEr-YEEmVenMKtV BMH2_YEAST 13 LAEqAEr-YEEmVenMKaV RA25_SCHPO 14 LAEqAEr-YEEmVenMKkV (D,S)(D,S) POS 11 1 123 45 678 9 01 2 1433_HORVU 212 LDSlGEesYKDsTliMQlL 1433_MAIZE 23 LDSlGEesYKDsTliMQlL RA24_SCHPO 208 LDSlSEesYKDsTliMQlL RA25_SCHPO 207 LDSlSEesYKDsTliMQlL (D,T)(D,T) POS 11 1 123 45 678 9 01 2 1431_LYCES 184 LDTlGEesYKDsTliMQlL 1431_VICFA 212 LDTlGEesYKDsTliMQlL 1432_LYCES 210 LDTlGEesYKDsTliMQlL 1432_VICFA 209 LDTlNEesYKDsTliMQlL 1433_CAEEL 204 LDTlNEdsYKDsTliMQlL 1433_DROME 206 LDTlNEdsYKDsTliMQlL 1433_ORYSA 212 LDTlGEesYKDsTliMQlL 1433_PEA 212 LDTlGEesYKDsTliMQlL 1433_SPIOL 165 LDTlGEdsYKDsTliMQlL 1433_XENLA 194 LDTlNEesYKDsTliMQlL 1434_MAIZE 199 LDTlSEesYKDsTliMQlL 143B_BOVIN 203 LDTlNEesYKDsTliMQlL 143B_HUMAN 203 LDTlNEesYKDsTliMQlL 143B_RAT 203 LDTlNEesYKDsTliMQlL 143C_ARATH 214 LDTlGEesYKDsTliMQlL 143E_RAT 206 LDTlSEesYKDsTliMQlL 143F_BOVIN 207 LDTlNEdsYKDsTliMQlL 143F_HUMAN 207 LDTlNEdsYKDsTliMQlL 143G_BOVIN 207 LDTlNEdsYKDsTliMQlL 143G_RAT 207 LDTlNEdsYKDsTliMQlL 143H_ARATH 215 LDTlGEesYKDsTliMQlL 143O_ARATH 209 LDTlGEesYKDsTliMQlL 143P_ARATH 208 LDTlGEesYKDsTliMQlL 143R_ARATH 212 LDTlGEesYKDsTliMQlL 143T_HUMAN 203 LDTlNEdsYKDsTliMQlL 143T_RAT 203 LDTlNEdsYKDsTliMQlL 143U_ARATH 211 LDTlGEesYKDsTliMQlL 143Z_HUMAN 203 LDTlSEesYKDsTliMQlL 143Z_RAT 203 LDTlSEesYKDsTliMQlL 143Z_SHEEP 203 LDTlSEesYKDsTliMQlL BMH1_YEAST 207 LDTlSEesYKDsTliMQlL BMH2_YEAST 207 LDTlSEesYKDsTliMQlL ----------------------------------------- ID 1433_2.pratt2 PA D-x(2,3)-I-x-[EKQ]-L-x(0,2)-D-[ENST]-[LV]-[GNPST]-x-[EW]-[ST]-x-[DK]-x(2)-[ADGT] NR MATCHES 54 POS 1 1 1 1 2 34 5678 90 1 2 1431_ENTHI 216 DstlImQLlrDNLTlWTsDacD 1431_LYCES 178 Dea-IaEL--DTLGeESyKdsT 1431_LYCES 194 DstlImQLlrDNLTlWTsDmqD 1431_VICFA 206 Dea-IaEL--DTLGeESyKdsT 1431_VICFA 222 DstlImQLlrDNLTlWTsDmqD 1432_ENTHI 199 Dea-IqKL--DEVPeESyKesT 1432_LYCES 204 Dea-IsEL--DTLGeESyKdsT 1432_LYCES 220 DstlImQLlrDNLTlWTsDnaD 1432_VICFA 203 Dea-IsEL--DTLNeESyKdsT 1433_CAEEL 214 DstlImQLlrDNLTlWTsDvgA 1433_DROME 216 DstlImQLlrDNLTlWTsDtqG 1433_ENTHI 213 DstlImQLlrDNLTlWTsDtaD 1433_HORVU 206 Dea-IaEL--DSLGeESyKdsT 1433_MAIZE 17 Dea-IsEL--DSLGeESyKdsT 1433_OENHO 222 DstlImQLlrDNLTlWTsDmqD 1433_ORYSA 206 Dda-IaEL--DTLGeESyKdsT 1433_PEA 206 Dea-IaEL--DTLGeESyKdsT 1433_PEA 222 DstlImQLlrDNLTlWTsDmqD 1433_SPIOL 175 DstlImQLlrDNLTlWTsDmqD 1433_XENLA 188 Dea-IrEL--DTLNeESyKdsT 1434_MAIZE 193 Dea-IsEL--DTLSeESyKdsT 143B_BOVIN 197 Dea-IaEL--DTLNeESyKdsT 143B_HUMAN 197 Dea-IaEL--DTLNeESyKdsT 143B_RAT 197 Dea-IaEL--DTLNeESyKdsT 143C_ARATH 208 Dea-IaEL--DTLGeESyKdsT 143E_RAT 200 Dda-IaEL--DTLSeESyKdsT 143E_RAT 216 DstlImQLlrDNLTlWTsDmqG 143E_SHEEP 216 DstlImQLlrDNLTlWTsDmqG 143F_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143F_HUMAN 217 DstlImQLlrDNLTlWTsDlqD 143G_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143G_RAT 217 DstlImQLlrDNLTlWTsDqqD 143H_ARATH 209 Dea-IaEL--DTLGeESyKdsT 143H_ARATH 225 DstlImQLlrDNLTlWTsDmrD 143O_ARATH 203 Dea-IaEL--DTLGeESyKdsT 143O_ARATH 219 DstlImQLlrDNLTlWTsDmqD 143P_ARATH 202 Dda-IaEL--DTLGeESyKdsT 143P_ARATH 218 DstlImQLlrDNLTlWTsDmtD 143R_ARATH 222 DstlImQLlrDNLTlWTsDyaG 143S_HUMAN 215 DstlImQLlrDNLTlWTaDnaG 143T_HUMAN 213 DstlImQLlrDNLTlWTsDsaG 143T_RAT 213 DstlImQLlrDNLTlWTsDsaG 143U_ARATH 205 Dea-IsEL--DTLGeESyKdsT 143U_ARATH 221 DstlImQLlrDNLTlWTsDlnD 143Z_HUMAN 197 Dea-IaEL--DTLSeESyKdsT 143Z_HUMAN 213 DstlImQLlrDNLTlWTsDtqG 143Z_RAT 197 Dea-IaEL--DTLSeESyKdsT 143Z_RAT 213 DstlImQLlrDNLTlWTsDtqG 143Z_SHEEP 197 Dea-IaEL--DTLSeESyKdsT 143Z_SHEEP 213 DstlImQLlrDNLTlWTsDtqG BMH1_YEAST 201 Dda-IaEL--DTLSeESyKdsT BMH2_YEAST 201 Dda-IaEL--DTLSeESyKdsT RA24_SCHPO 202 Dea-IsEL--DSLSeESyKdsT RA25_SCHPO 201 Dea-IsEL--DSLSeESyKdsT Fitness without relation: 25.9939 Relation between 10 and 11 giving score 26.4330 Statistics: 25.9939 26.4330 D-x(2,3)-I-x-[EKQ]-L-x(0,2)-D-[ENST]-[LV]-[GNPST]-x-[EW]-[ST]-x-[DK]-x(2)-[ADGT],(10,11) S -> (K), T -> (D), : 26.432988 NR MATCHES 54 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (S,K)(S,K) POS 1 1 1 1 2 34 5678 90 1 2 1431_LYCES 178 Dea-IaEL--DTLGeESyKdsT 1431_VICFA 206 Dea-IaEL--DTLGeESyKdsT 1432_ENTHI 199 Dea-IqKL--DEVPeESyKesT 1432_LYCES 204 Dea-IsEL--DTLGeESyKdsT 1432_VICFA 203 Dea-IsEL--DTLNeESyKdsT 1433_HORVU 206 Dea-IaEL--DSLGeESyKdsT 1433_MAIZE 17 Dea-IsEL--DSLGeESyKdsT 1433_ORYSA 206 Dda-IaEL--DTLGeESyKdsT 1433_PEA 206 Dea-IaEL--DTLGeESyKdsT 1433_XENLA 188 Dea-IrEL--DTLNeESyKdsT 1434_MAIZE 193 Dea-IsEL--DTLSeESyKdsT 143B_BOVIN 197 Dea-IaEL--DTLNeESyKdsT 143B_HUMAN 197 Dea-IaEL--DTLNeESyKdsT 143B_RAT 197 Dea-IaEL--DTLNeESyKdsT 143C_ARATH 208 Dea-IaEL--DTLGeESyKdsT 143E_RAT 200 Dda-IaEL--DTLSeESyKdsT 143H_ARATH 209 Dea-IaEL--DTLGeESyKdsT 143O_ARATH 203 Dea-IaEL--DTLGeESyKdsT 143P_ARATH 202 Dda-IaEL--DTLGeESyKdsT 143U_ARATH 205 Dea-IsEL--DTLGeESyKdsT 143Z_HUMAN 197 Dea-IaEL--DTLSeESyKdsT 143Z_RAT 197 Dea-IaEL--DTLSeESyKdsT 143Z_SHEEP 197 Dea-IaEL--DTLSeESyKdsT BMH1_YEAST 201 Dda-IaEL--DTLSeESyKdsT BMH2_YEAST 201 Dda-IaEL--DTLSeESyKdsT RA24_SCHPO 202 Dea-IsEL--DSLSeESyKdsT RA25_SCHPO 201 Dea-IsEL--DSLSeESyKdsT (T,D)(T,D) POS 1 1 1 1 2 34 5678 90 1 2 1431_ENTHI 216 DstlImQLlrDNLTlWTsDacD 1431_LYCES 194 DstlImQLlrDNLTlWTsDmqD 1431_VICFA 222 DstlImQLlrDNLTlWTsDmqD 1432_LYCES 220 DstlImQLlrDNLTlWTsDnaD 1433_CAEEL 214 DstlImQLlrDNLTlWTsDvgA 1433_DROME 216 DstlImQLlrDNLTlWTsDtqG 1433_ENTHI 213 DstlImQLlrDNLTlWTsDtaD 1433_OENHO 222 DstlImQLlrDNLTlWTsDmqD 1433_PEA 222 DstlImQLlrDNLTlWTsDmqD 1433_SPIOL 175 DstlImQLlrDNLTlWTsDmqD 143E_RAT 216 DstlImQLlrDNLTlWTsDmqG 143E_SHEEP 216 DstlImQLlrDNLTlWTsDmqG 143F_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143F_HUMAN 217 DstlImQLlrDNLTlWTsDlqD 143G_BOVIN 217 DstlImQLlrDNLTlWTsDqqD 143G_RAT 217 DstlImQLlrDNLTlWTsDqqD 143H_ARATH 225 DstlImQLlrDNLTlWTsDmrD 143O_ARATH 219 DstlImQLlrDNLTlWTsDmqD 143P_ARATH 218 DstlImQLlrDNLTlWTsDmtD 143R_ARATH 222 DstlImQLlrDNLTlWTsDyaG 143S_HUMAN 215 DstlImQLlrDNLTlWTaDnaG 143T_HUMAN 213 DstlImQLlrDNLTlWTsDsaG 143T_RAT 213 DstlImQLlrDNLTlWTsDsaG 143U_ARATH 221 DstlImQLlrDNLTlWTsDlnD 143Z_HUMAN 213 DstlImQLlrDNLTlWTsDtqG 143Z_RAT 213 DstlImQLlrDNLTlWTsDtqG 143Z_SHEEP 213 DstlImQLlrDNLTlWTsDtqG ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- ADOMET_SYNTHETASE_1.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID ADOMET_SYNTHETASE_1.pratt2 PA G-x(0,1)-A-x(0,1)-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS]-[EH] NR MATCHES 37 POS 1111111111222222 2222333 33333334444 1 2 34 56 7890123456789012345 6789012 34567890123 METK_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_DROME 291 G-A-FSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLAE METK_ECOLI 261 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_ECOLI 262 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 270 GgA-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 271 G-A-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 110 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 111 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_RAT 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_RAT 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_YEAST 266 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METK_YEAST 267 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_DIACA 271 GgA-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_DIACA 272 G-A-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_PETCR 21 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_PETCR 22 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_RAT 280 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_RAT 281 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_YEAST 267 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_YEAST 268 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METM_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE METM_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE METX_ECOLI 259 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_ECOLI 260 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_HAEIN 260 GgA-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE METX_HAEIN 261 G-A-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE Fitness without relation: 133.2911 Relation between 13 and 20 giving score 133.4803 Statistics: 133.2911 133.4803 RP G-x(0,1)-A-x(0,1)-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS]-[EH],(13,20) A -> (V), G -> (A), : 133.480285 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,V)(A,V) POS 1111111111222222 2222333 33333334444 1 2 34 56 7890123456789012345 6789012 34567890123 METK_DROME 291 G-A-FSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLAE METK_ECOLI 261 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_ECOLI 262 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_RAT 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_RAT 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_YEAST 266 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METK_YEAST 267 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_RAT 280 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_RAT 281 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_YEAST 267 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_YEAST 268 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METX_ECOLI 259 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_ECOLI 260 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_HAEIN 260 GgA-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE METX_HAEIN 261 G-A-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE (G,A)(G,A) POS 1111111111222222 2222333 33333334444 1 2 34 56 7890123456789012345 6789012 34567890123 METK_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 270 GgA-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 271 G-A-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 110 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 111 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_DIACA 271 GgA-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_DIACA 272 G-A-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_PETCR 21 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_PETCR 22 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METM_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE METM_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE ----------------------------------------- ID ADOMET_SYNTHETASE_1.pratt2 PA G-x(0,2)-G-x(0,1)-G-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV] NR MATCHES 32 POS 111111111122222222 2233333 333334444 1 2 3456 78 9012345678901234567 8901234 567890123 METK_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_DROME 286 GahGaGAFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGL METK_ECOLI 260 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGL METK_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 266 GahGgGAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 269 G--G-GAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 106 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 109 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_RAT 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_RAT 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_YEAST 265 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METL_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_DIACA 267 GahGgGAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_DIACA 270 G--G-GAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_PETCR 17 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_PETCR 20 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_RAT 276 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_RAT 279 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_YEAST 266 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METM_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV METM_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV METX_ECOLI 258 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGV METX_HAEIN 259 G--G-GAFSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGV Fitness without relation: 133.8815 Relation between 15 and 22 giving score 133.9439 Statistics: 133.8815 133.9439 RP G-x(0,2)-G-x(0,1)-G-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV],(15,22) A -> (V), G -> (A), : 133.943913 NR MATCHES 32 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,V)(A,V) POS 111111111122222222 2233333 333334444 1 2 3456 78 9012345678901234567 8901234 567890123 METK_DROME 286 GahGaGAFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGL METK_ECOLI 260 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGL METK_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_RAT 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_RAT 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_YEAST 265 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METL_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_RAT 276 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_RAT 279 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_YEAST 266 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METX_ECOLI 258 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGV METX_HAEIN 259 G--G-GAFSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGV (G,A)(G,A) POS 111111111122222222 2233333 333334444 1 2 3456 78 9012345678901234567 8901234 567890123 METK_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 266 GahGgGAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 269 G--G-GAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 106 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 109 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_DIACA 267 GahGgGAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_DIACA 270 G--G-GAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_PETCR 17 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_PETCR 20 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METM_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV METM_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV ----------------------------------------- ID ADOMET_SYNTHETASE_1.pratt2 PA G-x(0,2)-G-x(0,1)-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS] NR MATCHES 37 POS 11111111112222222 2223333 3333334444 1 2 345 67 8901234567890123456 7890123 4567890123 METK_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_DROME 289 Ga-G-AFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLA METK_ECOLI 260 Gg-G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 260 G--GgAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 261 G--G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 Gg-G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 G--GgAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 270 G--G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 110 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_RAT 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_YEAST 265 Gg-G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 265 G--GgAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 266 G--G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METL_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_DIACA 270 Gg-G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 270 G--GgAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 271 G--G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP Fitness without relation: 134.2646 Relation between 14 and 21 giving score 134.4537 Statistics: 134.2646 134.4537 RP G-x(0,2)-G-x(0,1)-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS],(14,21) A -> (V), G -> (A), : 134.453712 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,V)(A,V) POS 11111111112222222 2223333 3333334444 1 2 345 67 8901234567890123456 7890123 4567890123 METK_DROME 289 Ga-G-AFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLA METK_ECOLI 260 Gg-G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 260 G--GgAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 261 G--G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_YEAST 265 Gg-G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 265 G--GgAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 266 G--G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METL_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA (G,A)(G,A) POS 11111111112222222 2223333 3333334444 1 2 345 67 8901234567890123456 7890123 4567890123 METK_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 Gg-G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 G--GgAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 270 G--G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 110 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METL_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_DIACA 270 Gg-G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 270 G--GgAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 271 G--G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- ADOMET_SYNTHETASE_2.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID ADOMET_SYNTHETASE_2.pratt2 PA G-x(0,1)-A-x(0,1)-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS]-[EH] NR MATCHES 37 POS 1111111111222222 2222333 33333334444 1 2 34 56 7890123456789012345 6789012 34567890123 METK_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_DROME 291 G-A-FSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLAE METK_ECOLI 261 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_ECOLI 262 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 270 GgA-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 271 G-A-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 110 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 111 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_RAT 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_RAT 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_YEAST 266 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METK_YEAST 267 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_DIACA 271 GgA-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_DIACA 272 G-A-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_PETCR 21 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_PETCR 22 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_RAT 280 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_RAT 281 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_YEAST 267 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_YEAST 268 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METM_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE METM_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE METX_ECOLI 259 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_ECOLI 260 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_HAEIN 260 GgA-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE METX_HAEIN 261 G-A-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE Fitness without relation: 133.2911 Relation between 13 and 20 giving score 133.4803 Statistics: 133.2911 133.4803 RP G-x(0,1)-A-x(0,1)-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS]-[EH],(13,20) A -> (V), G -> (A), : 133.480285 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,V)(A,V) POS 1111111111222222 2222333 33333334444 1 2 34 56 7890123456789012345 6789012 34567890123 METK_DROME 291 G-A-FSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLAE METK_ECOLI 261 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_ECOLI 262 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLAE METK_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_RAT 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_RAT 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVSH METK_YEAST 266 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METK_YEAST 267 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_HUMAN 279 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_HUMAN 280 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_RAT 280 GgA-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_RAT 281 G-A-FSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVAE METL_YEAST 267 GgA-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METL_YEAST 268 G-A-FSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIAE METX_ECOLI 259 GgA-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_ECOLI 260 G-A-FSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGVAE METX_HAEIN 260 GgA-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE METX_HAEIN 261 G-A-FSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGVAE (G,A)(G,A) POS 1111111111222222 2222333 33333334444 1 2 34 56 7890123456789012345 6789012 34567890123 METK_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METK_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 270 GgA-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_ORYSA 271 G-A-FSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 110 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METK_PETCR 111 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_ARATH 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_ARATH 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVPE METL_DIACA 271 GgA-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_DIACA 272 G-A-FSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVPE METL_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVPE METL_PETCR 21 GgA-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METL_PETCR 22 G-A-FSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVPE METM_LYCES 267 GgA-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE METM_LYCES 268 G-A-FSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGVAE ----------------------------------------- ID ADOMET_SYNTHETASE_2.pratt2 PA G-x(0,2)-G-x(0,1)-G-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV] NR MATCHES 32 POS 111111111122222222 2233333 333334444 1 2 3456 78 9012345678901234567 8901234 567890123 METK_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_DROME 286 GahGaGAFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGL METK_ECOLI 260 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGL METK_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 266 GahGgGAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 269 G--G-GAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 106 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 109 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_RAT 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_RAT 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_YEAST 265 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METL_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_DIACA 267 GahGgGAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_DIACA 270 G--G-GAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_PETCR 17 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_PETCR 20 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_RAT 276 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_RAT 279 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_YEAST 266 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METM_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV METM_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV METX_ECOLI 258 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGV METX_HAEIN 259 G--G-GAFSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGV Fitness without relation: 133.8815 Relation between 15 and 22 giving score 133.9439 Statistics: 133.8815 133.9439 RP G-x(0,2)-G-x(0,1)-G-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV],(15,22) A -> (V), G -> (A), : 133.943913 NR MATCHES 32 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,V)(A,V) POS 111111111122222222 2233333 333334444 1 2 3456 78 9012345678901234567 8901234 567890123 METK_DROME 286 GahGaGAFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGL METK_ECOLI 260 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGL METK_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_RAT 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_RAT 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGV METK_YEAST 265 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METL_HUMAN 275 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_HUMAN 278 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_RAT 276 GahGgGAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_RAT 279 G--G-GAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGV METL_YEAST 266 G--G-GAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGI METX_ECOLI 258 G--G-GAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGV METX_HAEIN 259 G--G-GAFSgKEpSKVDRSAAYAARYVAKNIVaAGLADRCeIQLSYAIGV (G,A)(G,A) POS 111111111122222222 2233333 333334444 1 2 3456 78 9012345678901234567 8901234 567890123 METK_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METK_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 266 GahGgGAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_ORYSA 269 G--G-GAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 106 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METK_PETCR 109 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_ARATH 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_ARATH 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGV METL_DIACA 267 GahGgGAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_DIACA 270 G--G-GAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGV METL_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGV METL_PETCR 17 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METL_PETCR 20 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGV METM_LYCES 263 GahGgGAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV METM_LYCES 266 G--G-GAFSgKDpTKVDRSGAYIVRQAAKSVVaSGLARRCiVQVSYAIGV ----------------------------------------- ID ADOMET_SYNTHETASE_2.pratt2 PA G-x(0,2)-G-x(0,1)-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS] NR MATCHES 37 POS 11111111112222222 2223333 3333334444 1 2 345 67 8901234567890123456 7890123 4567890123 METK_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_DROME 289 Ga-G-AFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLA METK_ECOLI 260 Gg-G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 260 G--GgAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 261 G--G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 Gg-G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 G--GgAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 270 G--G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 110 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_RAT 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_YEAST 265 Gg-G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 265 G--GgAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 266 G--G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METL_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_DIACA 270 Gg-G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 270 G--GgAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 271 G--G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP Fitness without relation: 134.2646 Relation between 14 and 21 giving score 134.4537 Statistics: 134.2646 134.4537 RP G-x(0,2)-G-x(0,1)-A-F-S-x-K-[DE]-x-[ST]-K-V-D-R-S-[AG]-A-Y-[AIV]-[AV]-R-[QWY]-[AV]-A-K-[NS]-[ILV]-V-x-[AGNS]-G-[LM]-[AC]-[DKR]-R-[ACV]-x-[IV]-Q-[FILV]-S-Y-A-I-G-[ILV]-[APS],(14,21) A -> (V), G -> (A), : 134.453712 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,V)(A,V) POS 11111111112222222 2223333 3333334444 1 2 345 67 8901234567890123456 7890123 4567890123 METK_DROME 289 Ga-G-AFSgKDfTKVDRSAAYAARWVAKSLVkAGLCKRClVQVSYAIGLA METK_ECOLI 260 Gg-G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 260 G--GgAFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_ECOLI 261 G--G-AFSgKDpSKVDRSAAYAARYVAKNIVaAGLADRCeIQVSYAIGLA METK_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_RAT 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkGGLCRRVlVQVSYAIGVS METK_YEAST 265 Gg-G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 265 G--GgAFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METK_YEAST 266 G--G-AFSgKDySKVDRSAAYAARWVAKSLVaAGLCKRVqVQFSYAIGIA METL_HUMAN 278 Gg-G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 278 G--GgAFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA METL_HUMAN 279 G--G-AFSgKDyTKVDRSAAYAARWVAKSLVkAGLCRRVlVQVSYAIGVA (G,A)(G,A) POS 11111111112222222 2223333 3333334444 1 2 345 67 8901234567890123456 7890123 4567890123 METK_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METK_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 Gg-G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 269 G--GgAFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_ORYSA 270 G--G-AFSgKDpTKVDRSGAYVARQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 109 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METK_PETCR 110 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaSGLARRCiVQVSYAIGVP METL_ARATH 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_ARATH 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSVVaNGMARRAlVQVSYAIGVP METL_DIACA 270 Gg-G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 270 G--GgAFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_DIACA 271 G--G-AFSrKDpTKVDRSGAYIARQAAKSIVaSGLARRCiVQISYAIGVP METL_LYCES 266 Gg-G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 266 G--GgAFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP METL_LYCES 267 G--G-AFSgKDpTKVDRSGAYIVRQAAKSIVaNGLARRCiVQVSYAIGVP ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- CHALCONE_SYNTH.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID CHALCONE_SYNTH.pratt2 PA Q-x(0,1)-G-C-[FY]-[AG]-G-G-T-x(1,3)-L-x(2)-[AD]-x-[AD]-x-[AN]-[EN]-x-[GN]-x(2)-[AV]-x-V-[LMV]-x(4)-[ET]-x(2)-[ATV]-[FIMV]-x(3)-[AGNST]-[DP]-x-[DEHR] NR MATCHES 68 POS 1 1 11 1 1 11 1 12 22 2 1 2345678 9 0 1 23 4 5 67 8 90 12 3 CHS1_LYCES 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsE CHS1_LYCES 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsE CHS1_MAIZE 164 QqGCFAGGTv--LrvAkDvAEnNrgArVMvvcsEitAVtfrGPsE CHS1_MAIZE 165 Q-GCFAGGTv--LrvAkDvAEnNrgArVMvvcsEitAVtfrGPsE CHS1_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseeTpvTFrgpSDtH CHS1_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseeTpvTFrgpSDtH CHS1_PEA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS1_PEA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS1_PEA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS1_PEA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS1_SINAL 166 QqGCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS1_SINAL 166 QqGCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS1_SINAL 167 Q-GCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS1_SINAL 167 Q-GCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS1_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS1_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS1_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS1_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS2_LYCES 161 QqGCFAGGTvirLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS2_LYCES 162 Q-GCFAGGTvirLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS2_MAIZE 165 QqGCFAGGTv--LrvAkDlAEnNrgArVLvvcsEitAVtfrGPsE CHS2_MAIZE 166 Q-GCFAGGTv--LrvAkDlAEnNrgArVLvvcsEitAVtfrGPsE CHS2_MEDSA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS2_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS2_MEDSA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS2_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS2_PEA 161 QqGCFAGGTvfrLakDlAeNNkNarVlVVcsevTavTFrgpSDtH CHS2_PEA 162 Q-GCFAGGTvfrLakDlAeNNkNarVlVVcsevTavTFrgpSDtH CHS2_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS2_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS2_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS2_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS3_PEA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS3_PEA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS3_PEA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS3_PEA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS3_SINAL 166 QqGCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS3_SINAL 166 QqGCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS3_SINAL 167 Q-GCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS3_SINAL 167 Q-GCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS3_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS3_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS3_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS3_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS4_MEDSA 155 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS4_MEDSA 155 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS4_MEDSA 156 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS4_MEDSA 156 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS6_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNtgArVLvvcsEitAVtfrGPsD CHS6_SOYBN 161 QqGCFAGGTvlrLakDlAeNNtGarVlVVcseiTavTFrgpSDtH CHS6_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNtgArVLvvcsEitAVtfrGPsD CHS6_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNtGarVlVVcseiTavTFrgpSDtH CHS7_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsD CHS7_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS7_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsD CHS7_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS8_MEDSA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS8_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS8_MEDSA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS8_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS9_MEDSA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS9_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS9_MEDSA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS9_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHSA_PETHY 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPnD CHSA_PETHY 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpNDtH CHSA_PETHY 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPnD CHSA_PETHY 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpNDtH Fitness without relation: 63.2374 Relation between 20 and 22 giving score 64.6388 Statistics: 63.2374 64.6388 Q-x(0,1)-G-C-[FY]-[AG]-G-G-T-x(1,3)-L-x(2)-[AD]-x-[AD]-x-[AN]-[EN]-x-[GN]-x(2)-[AV]-x-V-[LMV]-x(4)-[ET]-x(2)-[ATV]-[FIMV]-x(3)-[AGNST]-[DP]-x-[DEHR],(20,22) F -> (D), V -> (P), : 64.638829 NR MATCHES 68 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (F,D)(F,D) POS 1 1 11 1 1 11 1 12 22 2 1 2345678 9 0 1 23 4 5 67 8 90 12 3 CHS1_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseeTpvTFrgpSDtH CHS1_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseeTpvTFrgpSDtH CHS1_PEA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS1_PEA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS1_SINAL 166 QqGCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS1_SINAL 167 Q-GCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS1_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS1_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS2_LYCES 161 QqGCFAGGTvirLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS2_LYCES 162 Q-GCFAGGTvirLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS2_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS2_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS2_PEA 161 QqGCFAGGTvfrLakDlAeNNkNarVlVVcsevTavTFrgpSDtH CHS2_PEA 162 Q-GCFAGGTvfrLakDlAeNNkNarVlVVcsevTavTFrgpSDtH CHS2_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS2_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS3_PEA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS3_PEA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS3_SINAL 166 QqGCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS3_SINAL 167 Q-GCFAGGTvlrLakDlAeNNrGarVlVVcseiTavTFrgpSDtH CHS3_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS3_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpTDtH CHS4_MEDSA 155 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS4_MEDSA 156 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS6_SOYBN 161 QqGCFAGGTvlrLakDlAeNNtGarVlVVcseiTavTFrgpSDtH CHS6_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNtGarVlVVcseiTavTFrgpSDtH CHS7_SOYBN 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS7_SOYBN 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpSDtH CHS8_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS8_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS9_MEDSA 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHS9_MEDSA 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcsevTavTFrgpSDtH CHSA_PETHY 161 QqGCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpNDtH CHSA_PETHY 162 Q-GCFAGGTvlrLakDlAeNNkGarVlVVcseiTavTFrgpNDtH (V,P)(V,P) POS 1 1 11 1 1 11 1 12 22 2 1 2345678 9 0 1 23 4 5 67 8 90 12 3 CHS1_LYCES 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsE CHS1_LYCES 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsE CHS1_MAIZE 164 QqGCFAGGTv--LrvAkDvAEnNrgArVMvvcsEitAVtfrGPsE CHS1_MAIZE 165 Q-GCFAGGTv--LrvAkDvAEnNrgArVMvvcsEitAVtfrGPsE CHS1_PEA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS1_PEA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS1_SINAL 166 QqGCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS1_SINAL 167 Q-GCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS1_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS1_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS2_MAIZE 165 QqGCFAGGTv--LrvAkDlAEnNrgArVLvvcsEitAVtfrGPsE CHS2_MAIZE 166 Q-GCFAGGTv--LrvAkDlAEnNrgArVLvvcsEitAVtfrGPsE CHS2_MEDSA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS2_MEDSA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS2_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS2_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS3_PEA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS3_PEA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS3_SINAL 166 QqGCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS3_SINAL 167 Q-GCFAGGTv--LrlAkDlAEnNrgArVLvvcsEitAVtfrGPsD CHS3_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS3_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPtD CHS4_MEDSA 155 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS4_MEDSA 156 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS6_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNtgArVLvvcsEitAVtfrGPsD CHS6_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNtgArVLvvcsEitAVtfrGPsD CHS7_SOYBN 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsD CHS7_SOYBN 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPsD CHS8_MEDSA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS8_MEDSA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS9_MEDSA 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHS9_MEDSA 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEvtAVtfrGPsD CHSA_PETHY 161 QqGCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPnD CHSA_PETHY 162 Q-GCFAGGTv--LrlAkDlAEnNkgArVLvvcsEitAVtfrGPnD ----------------------------------------- ID CHALCONE_SYNTH.pratt2 PA G-C-[FY]-[AG]-G-G-T-x(1,3)-L-x(2,4)-A-[EK]-[DN]-x(3)-[AN]-[NR]-x-[GL]-[AIV]-x-[CV]-x(3)-[CT]-[ASV]-x(4)-[AGIV]-[GPT]-x-[DER]-[GNST]-x(2)-[DE] NR MATCHES 37 POS 11 11 11 1 11 12 22 2 1234567 8 901 23 45 6 78 90 12 3 CHS1_LYCES 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGpsE CHS1_LYCES 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPsEShlD CHS1_MAIZE 166 GCFAGGTv--Lrv--AKDvaeNNrGArVmvvCSeitaVTfRGpsE CHS1_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeetpVTfRGpsD CHS1_PEA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS1_PEA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS1_SINAL 168 GCFAGGTv--Lrl--AKDlaeNNrGArVlvvCSeitaVTfRGpsD CHS1_SINAL 168 GCFAGGTvlrLakdlAENnrgARvLVvCseiTAvtfrGPsDThlD CHS1_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGptD CHS1_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPtDThlD CHS2_LYCES 163 GCFAGGTvirLakdlAENnkgARvLVvCseiTAvtfrGPsDThlD CHS2_MAIZE 167 GCFAGGTv--Lrv--AKDlaeNNrGArVlvvCSeitaVTfRGpsE CHS2_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS2_MEDSA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS2_PEA 163 GCFAGGTvfrLakdlAENnknARvLVvCsevTAvtfrGPsDThlD CHS2_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGptD CHS2_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPtDThlD CHS3_PEA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS3_PEA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS3_SINAL 168 GCFAGGTv--Lrl--AKDlaeNNrGArVlvvCSeitaVTfRGpsD CHS3_SINAL 168 GCFAGGTvlrLakdlAENnrgARvLVvCseiTAvtfrGPsDThlD CHS3_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGptD CHS3_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPtDThlD CHS4_MEDSA 157 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS4_MEDSA 157 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS6_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNtGArVlvvCSeitaVTfRGpsD CHS6_SOYBN 163 GCFAGGTvlrLakdlAENntgARvLVvCseiTAvtfrGPsDThlD CHS7_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGpsD CHS7_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPsDThlD CHS8_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS8_MEDSA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS9_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS9_MEDSA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHSA_PETHY 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGpnD CHSA_PETHY 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPnDThlD CHSB_PETHY 166 GCFAGGTm--Lrl--AKDlaeNNkGArVlvvCAessaIGfRGpsE CHSD_PETHY 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitvVTfRGpnD Fitness without relation: 58.9096 Relation between 15 and 17 giving score 59.6033 Statistics: 58.9096 59.6033 G-C-[FY]-[AG]-G-G-T-x(1,3)-L-x(2,4)-A-[EK]-[DN]-x(3)-[AN]-[NR]-x-[GL]-[AIV]-x-[CV]-x(3)-[CT]-[ASV]-x(4)-[AGIV]-[GPT]-x-[DER]-[GNST]-x(2)-[DE],(15,17) A -> (C), V -> (T), : 59.603342 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,C)(A,C) POS 11 11 11 1 11 12 22 2 1234567 8 901 23 45 6 78 90 12 3 CHS1_LYCES 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGpsE CHS1_MAIZE 166 GCFAGGTv--Lrv--AKDvaeNNrGArVmvvCSeitaVTfRGpsE CHS1_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeetpVTfRGpsD CHS1_PEA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS1_SINAL 168 GCFAGGTv--Lrl--AKDlaeNNrGArVlvvCSeitaVTfRGpsD CHS1_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGptD CHS2_MAIZE 167 GCFAGGTv--Lrv--AKDlaeNNrGArVlvvCSeitaVTfRGpsE CHS2_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS2_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGptD CHS3_PEA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS3_SINAL 168 GCFAGGTv--Lrl--AKDlaeNNrGArVlvvCSeitaVTfRGpsD CHS3_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGptD CHS4_MEDSA 157 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS6_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNtGArVlvvCSeitaVTfRGpsD CHS7_SOYBN 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGpsD CHS8_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHS9_MEDSA 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSevtaVTfRGpsD CHSA_PETHY 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitaVTfRGpnD CHSB_PETHY 166 GCFAGGTm--Lrl--AKDlaeNNkGArVlvvCAessaIGfRGpsE CHSD_PETHY 163 GCFAGGTv--Lrl--AKDlaeNNkGArVlvvCSeitvVTfRGpnD (V,T)(V,T) POS 11 11 11 1 11 12 22 2 1234567 8 901 23 45 6 78 90 12 3 CHS1_LYCES 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPsEShlD CHS1_PEA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS1_SINAL 168 GCFAGGTvlrLakdlAENnrgARvLVvCseiTAvtfrGPsDThlD CHS1_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPtDThlD CHS2_LYCES 163 GCFAGGTvirLakdlAENnkgARvLVvCseiTAvtfrGPsDThlD CHS2_MEDSA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS2_PEA 163 GCFAGGTvfrLakdlAENnknARvLVvCsevTAvtfrGPsDThlD CHS2_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPtDThlD CHS3_PEA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS3_SINAL 168 GCFAGGTvlrLakdlAENnrgARvLVvCseiTAvtfrGPsDThlD CHS3_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPtDThlD CHS4_MEDSA 157 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS6_SOYBN 163 GCFAGGTvlrLakdlAENntgARvLVvCseiTAvtfrGPsDThlD CHS7_SOYBN 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPsDThlD CHS8_MEDSA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHS9_MEDSA 163 GCFAGGTvlrLakdlAENnkgARvLVvCsevTAvtfrGPsDThlD CHSA_PETHY 163 GCFAGGTvlrLakdlAENnkgARvLVvCseiTAvtfrGPnDThlD ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- CPSASE_1.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID CPSASE_1.pratt2 PA E-x-N-x-R-x-[QS]-x-[EST]-x-[APT]-x-[ASTV]-[ES] NR MATCHES 37 POS 1 2 3 4 5 6 78 ACCA_MYCLE 295 EvNtRlQvEhPvTE ACCA_MYCTU 290 EmNtRlQvEhPvTE ACCC_ANASP 289 EmNtRiQvEhPvTE ACCC_ECOLI 288 EmNtRiQvEhPvTE ACCC_HAEIN 288 EmNtRiQvEhPvTE ACCC_PSEAE 288 EmNtRvQvEhPvSE CARB_BACCL 298 EvNpRvSrSsAlAS CARB_BACSU 298 EvNpRvSrSsAlAS CARB_ECOLI 298 EmNpRvSrSsAlAS CARB_METBA 158 EaNpRsSrTiPfVS CARB_TRICU 362 EmNaRlSrSsAlAS CARB_TRICU 902 EcNlRaSrSfPfVS CARB_YEAST 317 EvNaRlSrSsAlAS CARB_YEAST 861 EcNiRaSrSfPfVS CARY_BACSU 298 EvNpRvSrSsAlAS CARY_BACSU 834 EvNpRaSrTvPvVS COAC_CHICK 437 ElNpRlQvEhPcTE COAC_RAT 436 ElNpRlQvEhPcTE COAC_YEAST 379 ElNpRlQvEhPtTE CPSM_HUMAN 1255 EcNlRaSrSfPsVS CPSM_RAT 714 EvNaRlSrSsAlAS CPSM_RAT 1255 EcNlRaSrSfPfVS DUR1_YEAST 919 EvNtRlQvEhPiTE HFA1_YEAST 331 ElNpRlQvEhPtTE PCCA_HUMAN 324 EmNtRlQvEhPvTE PCCA_RAT 325 EmNtRlQvEhPvTE PYC1_YEAST 308 EiNpRiQvEhTiTE PYC2_YEAST 309 EiNpRiQvEhTiTE PYR1_DICDI 654 EvNaRlSrSsAlAS PYR1_DICDI 1192 EcNlRcSrSfPfVS PYR1_DROME 696 EvNeRlSrTsAlAS PYR1_DROME 1233 EcNvRvSrSfPfVS PYR1_MESAU 682 EvNaRlSrSsAlAS PYR1_MESAU 1214 EcNvRvSrSfPfVS PYR1_SCHPO 761 EvNaRlSrSsAlAS PYR1_SCHPO 1295 EcNvRaSrSfPfVS PYR1_YEAST 725 EvNaRlSrSsAlAS Fitness without relation: 13.4238 Relation between 4 and 8 giving score 13.5924 Statistics: 13.4238 13.5924 RP E-x-N-x-R-x-[QS]-x-[EST]-x-[APT]-x-[ASTV]-[ES],(4,8) Q -> (E), S -> (S), : 13.592435 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (Q,E)(Q,E) POS 1 2 3 4 5 6 78 ACCA_MYCLE 295 EvNtRlQvEhPvTE ACCA_MYCTU 290 EmNtRlQvEhPvTE ACCC_ANASP 289 EmNtRiQvEhPvTE ACCC_ECOLI 288 EmNtRiQvEhPvTE ACCC_HAEIN 288 EmNtRiQvEhPvTE ACCC_PSEAE 288 EmNtRvQvEhPvSE COAC_CHICK 437 ElNpRlQvEhPcTE COAC_RAT 436 ElNpRlQvEhPcTE COAC_YEAST 379 ElNpRlQvEhPtTE DUR1_YEAST 919 EvNtRlQvEhPiTE HFA1_YEAST 331 ElNpRlQvEhPtTE PCCA_HUMAN 324 EmNtRlQvEhPvTE PCCA_RAT 325 EmNtRlQvEhPvTE PYC1_YEAST 308 EiNpRiQvEhTiTE PYC2_YEAST 309 EiNpRiQvEhTiTE (S,S)(S,S) POS 1 2 3 4 5 6 78 CARB_BACCL 298 EvNpRvSrSsAlAS CARB_BACSU 298 EvNpRvSrSsAlAS CARB_ECOLI 298 EmNpRvSrSsAlAS CARB_METBA 158 EaNpRsSrTiPfVS CARB_TRICU 362 EmNaRlSrSsAlAS CARB_TRICU 902 EcNlRaSrSfPfVS CARB_YEAST 317 EvNaRlSrSsAlAS CARB_YEAST 861 EcNiRaSrSfPfVS CARY_BACSU 298 EvNpRvSrSsAlAS CARY_BACSU 834 EvNpRaSrTvPvVS CPSM_HUMAN 1255 EcNlRaSrSfPsVS CPSM_RAT 714 EvNaRlSrSsAlAS CPSM_RAT 1255 EcNlRaSrSfPfVS PYR1_DICDI 654 EvNaRlSrSsAlAS PYR1_DICDI 1192 EcNlRcSrSfPfVS PYR1_DROME 696 EvNeRlSrTsAlAS PYR1_DROME 1233 EcNvRvSrSfPfVS PYR1_MESAU 682 EvNaRlSrSsAlAS PYR1_MESAU 1214 EcNvRvSrSfPfVS PYR1_SCHPO 761 EvNaRlSrSsAlAS PYR1_SCHPO 1295 EcNvRaSrSfPfVS PYR1_YEAST 725 EvNaRlSrSsAlAS ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- CPSASE_2.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID CPSASE_2.pratt2 PA E-x-N-x-R-x-[QS]-x-[EST]-x-[APT]-x-[ASTV]-[ES] NR MATCHES 37 POS 1 2 3 4 5 6 78 ACCA_MYCLE 295 EvNtRlQvEhPvTE ACCA_MYCTU 290 EmNtRlQvEhPvTE ACCC_ANASP 289 EmNtRiQvEhPvTE ACCC_ECOLI 288 EmNtRiQvEhPvTE ACCC_HAEIN 288 EmNtRiQvEhPvTE ACCC_PSEAE 288 EmNtRvQvEhPvSE CARB_BACCL 298 EvNpRvSrSsAlAS CARB_BACSU 298 EvNpRvSrSsAlAS CARB_ECOLI 298 EmNpRvSrSsAlAS CARB_METBA 158 EaNpRsSrTiPfVS CARB_TRICU 362 EmNaRlSrSsAlAS CARB_TRICU 902 EcNlRaSrSfPfVS CARB_YEAST 317 EvNaRlSrSsAlAS CARB_YEAST 861 EcNiRaSrSfPfVS CARY_BACSU 298 EvNpRvSrSsAlAS CARY_BACSU 834 EvNpRaSrTvPvVS COAC_CHICK 437 ElNpRlQvEhPcTE COAC_RAT 436 ElNpRlQvEhPcTE COAC_YEAST 379 ElNpRlQvEhPtTE CPSM_HUMAN 1255 EcNlRaSrSfPsVS CPSM_RAT 714 EvNaRlSrSsAlAS CPSM_RAT 1255 EcNlRaSrSfPfVS DUR1_YEAST 919 EvNtRlQvEhPiTE HFA1_YEAST 331 ElNpRlQvEhPtTE PCCA_HUMAN 324 EmNtRlQvEhPvTE PCCA_RAT 325 EmNtRlQvEhPvTE PYC1_YEAST 308 EiNpRiQvEhTiTE PYC2_YEAST 309 EiNpRiQvEhTiTE PYR1_DICDI 654 EvNaRlSrSsAlAS PYR1_DICDI 1192 EcNlRcSrSfPfVS PYR1_DROME 696 EvNeRlSrTsAlAS PYR1_DROME 1233 EcNvRvSrSfPfVS PYR1_MESAU 682 EvNaRlSrSsAlAS PYR1_MESAU 1214 EcNvRvSrSfPfVS PYR1_SCHPO 761 EvNaRlSrSsAlAS PYR1_SCHPO 1295 EcNvRaSrSfPfVS PYR1_YEAST 725 EvNaRlSrSsAlAS Fitness without relation: 13.4238 Relation between 4 and 8 giving score 13.5924 Statistics: 13.4238 13.5924 RP E-x-N-x-R-x-[QS]-x-[EST]-x-[APT]-x-[ASTV]-[ES],(4,8) Q -> (E), S -> (S), : 13.592435 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (Q,E)(Q,E) POS 1 2 3 4 5 6 78 ACCA_MYCLE 295 EvNtRlQvEhPvTE ACCA_MYCTU 290 EmNtRlQvEhPvTE ACCC_ANASP 289 EmNtRiQvEhPvTE ACCC_ECOLI 288 EmNtRiQvEhPvTE ACCC_HAEIN 288 EmNtRiQvEhPvTE ACCC_PSEAE 288 EmNtRvQvEhPvSE COAC_CHICK 437 ElNpRlQvEhPcTE COAC_RAT 436 ElNpRlQvEhPcTE COAC_YEAST 379 ElNpRlQvEhPtTE DUR1_YEAST 919 EvNtRlQvEhPiTE HFA1_YEAST 331 ElNpRlQvEhPtTE PCCA_HUMAN 324 EmNtRlQvEhPvTE PCCA_RAT 325 EmNtRlQvEhPvTE PYC1_YEAST 308 EiNpRiQvEhTiTE PYC2_YEAST 309 EiNpRiQvEhTiTE (S,S)(S,S) POS 1 2 3 4 5 6 78 CARB_BACCL 298 EvNpRvSrSsAlAS CARB_BACSU 298 EvNpRvSrSsAlAS CARB_ECOLI 298 EmNpRvSrSsAlAS CARB_METBA 158 EaNpRsSrTiPfVS CARB_TRICU 362 EmNaRlSrSsAlAS CARB_TRICU 902 EcNlRaSrSfPfVS CARB_YEAST 317 EvNaRlSrSsAlAS CARB_YEAST 861 EcNiRaSrSfPfVS CARY_BACSU 298 EvNpRvSrSsAlAS CARY_BACSU 834 EvNpRaSrTvPvVS CPSM_HUMAN 1255 EcNlRaSrSfPsVS CPSM_RAT 714 EvNaRlSrSsAlAS CPSM_RAT 1255 EcNlRaSrSfPfVS PYR1_DICDI 654 EvNaRlSrSsAlAS PYR1_DICDI 1192 EcNlRcSrSfPfVS PYR1_DROME 696 EvNeRlSrTsAlAS PYR1_DROME 1233 EcNvRvSrSfPfVS PYR1_MESAU 682 EvNaRlSrSsAlAS PYR1_MESAU 1214 EcNvRvSrSfPfVS PYR1_SCHPO 761 EvNaRlSrSsAlAS PYR1_SCHPO 1295 EcNvRaSrSfPfVS PYR1_YEAST 725 EvNaRlSrSsAlAS ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- EPO_TPO.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID EPO_TPO.pratt2 PA L-x(0,1)-L-L-x(0,2)-L-x(2)-L-[GLP]-x-[GPT]-x-[GLP]-[LPV]-[LP]-x-[AGL]-x-[APT] NR MATCHES 20 POS 1 1 1 1 23 4 56 7 890 1 2 EPO_CANFA 5 LlLL--LslLLlPlGLPvLgA EPO_CANFA 5 L-LLl-LslLLlPlGLPvLgA EPO_CANFA 5 LlLLlsLllLPlGlPVLgApP EPO_CANFA 6 L-LL--LslLLlPlGLPvLgA EPO_CANFA 6 LlLLs-LllLPlGlPVLgApP EPO_CANFA 6 L-LLlsLllLPlGlPVLgApP EPO_CANFA 7 L-LLs-LllLPlGlPVLgApP EPO_FELCA 5 LlLL--LslLLlPlGLPvLgA EPO_FELCA 5 L-LLl-LslLLlPlGLPvLgA EPO_FELCA 5 LlLLlsLllLPlGlPVLgApP EPO_FELCA 6 L-LL--LslLLlPlGLPvLgA EPO_FELCA 6 LlLLs-LllLPlGlPVLgApP EPO_FELCA 6 L-LLlsLllLPlGlPVLgApP EPO_FELCA 7 L-LLs-LllLPlGlPVLgApP EPO_HUMAN 10 LwLLlsLlsLPlGlPVLgApP EPO_HUMAN 12 L-LLs-LlsLPlGlPVLgApP EPO_MACFA 10 LwLLlsLvsLPlGlPVPgApP EPO_MACFA 12 L-LLs-LvsLPlGlPVPgApP EPO_MOUSE 9 LlLL--LslLLiPlGLPvLcA EPO_MOUSE 9 L-LLl-LslLLiPlGLPvLcA Fitness without relation: 22.2246 Relation between 11 and 12 giving score 22.3094 Statistics: 22.2246 22.3094 L-x(0,1)-L-L-x(0,2)-L-x(2)-L-[GLP]-x-[GPT]-x-[GLP]-[LPV]-[LP]-x-[AGL]-x-[APT],(11,12) A -> (P), L -> (A), : 22.309427 NR MATCHES 20 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,P)(A,P) POS 1 1 1 1 23 4 56 7 890 1 2 EPO_CANFA 5 LlLLlsLllLPlGlPVLgApP EPO_CANFA 6 LlLLs-LllLPlGlPVLgApP EPO_CANFA 6 L-LLlsLllLPlGlPVLgApP EPO_CANFA 7 L-LLs-LllLPlGlPVLgApP EPO_FELCA 5 LlLLlsLllLPlGlPVLgApP EPO_FELCA 6 LlLLs-LllLPlGlPVLgApP EPO_FELCA 6 L-LLlsLllLPlGlPVLgApP EPO_FELCA 7 L-LLs-LllLPlGlPVLgApP EPO_HUMAN 10 LwLLlsLlsLPlGlPVLgApP EPO_HUMAN 12 L-LLs-LlsLPlGlPVLgApP EPO_MACFA 10 LwLLlsLvsLPlGlPVPgApP EPO_MACFA 12 L-LLs-LvsLPlGlPVPgApP (L,A)(L,A) POS 1 1 1 1 23 4 56 7 890 1 2 EPO_CANFA 5 LlLL--LslLLlPlGLPvLgA EPO_CANFA 5 L-LLl-LslLLlPlGLPvLgA EPO_CANFA 6 L-LL--LslLLlPlGLPvLgA EPO_FELCA 5 LlLL--LslLLlPlGLPvLgA EPO_FELCA 5 L-LLl-LslLLlPlGLPvLgA EPO_FELCA 6 L-LL--LslLLlPlGLPvLgA EPO_MOUSE 9 LlLL--LslLLiPlGLPvLcA EPO_MOUSE 9 L-LLl-LslLLiPlGLPvLcA ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- EUK_CO2_ANHYDRASE.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID EUK_CO2_ANHYDRASE.pratt2 PA S-x(0,1)-L-x(1,2)-P-[APST]-x(2)-[DE]-x(3)-[WY]-x-[GILV] NR MATCHES 39 POS 1 2 34 5 6 7 CAH1_CHLRE 258 S-LttPPcsEgllWhV CAH1_HORSE 182 SsLl-PSspDywtYsG CAH1_HORSE 183 S-Ll-PSspDywtYsG CAH1_HORSE 197 S-LthPPlyEsvtWiV CAH1_HUMAN 182 StLl-PSslDfwtYpG CAH1_HUMAN 197 S-LthPPlyEsvtWiI CAH1_MACMU 182 StLl-PSslDfwtYsG CAH1_MACMU 197 S-LthPPlyEsvtWiI CAH1_MACNE 182 StLl-PSslDfwtYsG CAH1_MACNE 197 S-LthPPlyEsvtWiI CAH1_MOUSE 182 SsLl-PSslDywtYfG CAH1_MOUSE 183 S-Ll-PSslDywtYfG CAH1_MOUSE 197 S-LthPPlhEsvtWvI CAH1_RABIT 157 StLl-PPslDywtYsG CAH1_RABIT 172 S-LthPPlhEsvtWlI CAH2_BOVIN 195 S-LttPPllEsvtWiV CAH2_CHICK 195 S-LttPPlhEcviWhV CAH2_CHLRE 258 S-LttPPcsEgllWhV CAH2_HUMAN 195 S-LttPPllEcvtWiV CAH2_MOUSE 195 S-LttPPllEcvtWiV CAH2_RABIT 195 S-LttPPllEcvtWiV CAH2_RAT 195 S-LttPPllEcvtWiV CAH2_SHEEP 195 S-LtnPPllEsvtWvV CAH3_HORSE 180 ScLf-PTcrDywtYrG CAH3_HUMAN 180 ScLf-PAcrDywtYqG CAH3_MOUSE 180 ScLf-PAcrDywtYhG CAH3_RAT 180 ScLf-PAcrDywtYhG CAH4_HUMAN 223 S-LttPTcdEkvvWtV CAH5_HUMAN 218 StLl-PTcwDywtYaG CAH5_HUMAN 233 S-LttPPltEsvtWiI CAH5_MOUSE 212 ScLl-PAcrDywtYpG CAH5_MOUSE 227 S-LttPPlaEsvtWiV CAH5_RAT 217 ScLl-PAcrDywtYpG CAH5_RAT 232 S-LttPPlaEsvtWiV CAH6_HUMAN 218 S-LttPPctEnvhWfV CAH6_SHEEP 201 S-LttPPctEnvhWfV CAH7_HUMAN 199 S-LttPPlsEsvtWiV CAHP_HUMAN 221 S-LtiPPcsEgvtWiL CAHP_MOUSE 222 S-LtiPPcsEgvtWiL Fitness without relation: 11.0296 Relation between 5 and 6 giving score 11.2598 Statistics: 11.0296 11.2598 S-x(0,1)-L-x(1,2)-P-[APST]-x(2)-[DE]-x(3)-[WY]-x-[GILV],(5,6) D -> (Y), E -> (W), : 11.259798 NR MATCHES 39 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (D,Y)(D,Y) POS 1 2 34 5 6 7 CAH1_HORSE 182 SsLl-PSspDywtYsG CAH1_HORSE 183 S-Ll-PSspDywtYsG CAH1_HUMAN 182 StLl-PSslDfwtYpG CAH1_MACMU 182 StLl-PSslDfwtYsG CAH1_MACNE 182 StLl-PSslDfwtYsG CAH1_MOUSE 182 SsLl-PSslDywtYfG CAH1_MOUSE 183 S-Ll-PSslDywtYfG CAH1_RABIT 157 StLl-PPslDywtYsG CAH3_HORSE 180 ScLf-PTcrDywtYrG CAH3_HUMAN 180 ScLf-PAcrDywtYqG CAH3_MOUSE 180 ScLf-PAcrDywtYhG CAH3_RAT 180 ScLf-PAcrDywtYhG CAH5_HUMAN 218 StLl-PTcwDywtYaG CAH5_MOUSE 212 ScLl-PAcrDywtYpG CAH5_RAT 217 ScLl-PAcrDywtYpG (E,W)(E,W) POS 1 2 34 5 6 7 CAH1_CHLRE 258 S-LttPPcsEgllWhV CAH1_HORSE 197 S-LthPPlyEsvtWiV CAH1_HUMAN 197 S-LthPPlyEsvtWiI CAH1_MACMU 197 S-LthPPlyEsvtWiI CAH1_MACNE 197 S-LthPPlyEsvtWiI CAH1_MOUSE 197 S-LthPPlhEsvtWvI CAH1_RABIT 172 S-LthPPlhEsvtWlI CAH2_BOVIN 195 S-LttPPllEsvtWiV CAH2_CHICK 195 S-LttPPlhEcviWhV CAH2_CHLRE 258 S-LttPPcsEgllWhV CAH2_HUMAN 195 S-LttPPllEcvtWiV CAH2_MOUSE 195 S-LttPPllEcvtWiV CAH2_RABIT 195 S-LttPPllEcvtWiV CAH2_RAT 195 S-LttPPllEcvtWiV CAH2_SHEEP 195 S-LtnPPllEsvtWvV CAH4_HUMAN 223 S-LttPTcdEkvvWtV CAH5_HUMAN 233 S-LttPPltEsvtWiI CAH5_MOUSE 227 S-LttPPlaEsvtWiV CAH5_RAT 232 S-LttPPlaEsvtWiV CAH6_HUMAN 218 S-LttPPctEnvhWfV CAH6_SHEEP 201 S-LttPPctEnvhWfV CAH7_HUMAN 199 S-LttPPlsEsvtWiV CAHP_HUMAN 221 S-LtiPPcsEgvtWiL CAHP_MOUSE 222 S-LtiPPcsEgvtWiL ----------------------------------------- ID EUK_CO2_ANHYDRASE.pratt2 PA S-x(0,2)-L-x(1,2)-P-[APST]-x(2)-[DE]-x(3)-[WY]-x-[GILV] NR MATCHES 43 POS 1 2 34 5 6 7 CAH1_CHLRE 258 S--LttPPcsEgllWhV CAH1_HORSE 182 Ss-Ll-PSspDywtYsG CAH1_HORSE 183 S--Ll-PSspDywtYsG CAH1_HORSE 195 SgsLthPPlyEsvtWiV CAH1_HORSE 197 S--LthPPlyEsvtWiV CAH1_HUMAN 182 St-Ll-PSslDfwtYpG CAH1_HUMAN 197 S--LthPPlyEsvtWiI CAH1_MACMU 182 St-Ll-PSslDfwtYsG CAH1_MACMU 195 SgsLthPPlyEsvtWiI CAH1_MACMU 197 S--LthPPlyEsvtWiI CAH1_MACNE 182 St-Ll-PSslDfwtYsG CAH1_MACNE 195 SgsLthPPlyEsvtWiI CAH1_MACNE 197 S--LthPPlyEsvtWiI CAH1_MOUSE 182 Ss-Ll-PSslDywtYfG CAH1_MOUSE 183 S--Ll-PSslDywtYfG CAH1_MOUSE 197 S--LthPPlhEsvtWvI CAH1_RABIT 157 St-Ll-PPslDywtYsG CAH1_RABIT 170 SgsLthPPlhEsvtWlI CAH1_RABIT 172 S--LthPPlhEsvtWlI CAH2_BOVIN 195 S--LttPPllEsvtWiV CAH2_CHICK 195 S--LttPPlhEcviWhV CAH2_CHLRE 258 S--LttPPcsEgllWhV CAH2_HUMAN 195 S--LttPPllEcvtWiV CAH2_MOUSE 195 S--LttPPllEcvtWiV CAH2_RABIT 195 S--LttPPllEcvtWiV CAH2_RAT 195 S--LttPPllEcvtWiV CAH2_SHEEP 195 S--LtnPPllEsvtWvV CAH3_HORSE 180 Sc-Lf-PTcrDywtYrG CAH3_HUMAN 180 Sc-Lf-PAcrDywtYqG CAH3_MOUSE 180 Sc-Lf-PAcrDywtYhG CAH3_RAT 180 Sc-Lf-PAcrDywtYhG CAH4_HUMAN 223 S--LttPTcdEkvvWtV CAH5_HUMAN 218 St-Ll-PTcwDywtYaG CAH5_HUMAN 233 S--LttPPltEsvtWiI CAH5_MOUSE 212 Sc-Ll-PAcrDywtYpG CAH5_MOUSE 227 S--LttPPlaEsvtWiV CAH5_RAT 217 Sc-Ll-PAcrDywtYpG CAH5_RAT 232 S--LttPPlaEsvtWiV CAH6_HUMAN 218 S--LttPPctEnvhWfV CAH6_SHEEP 201 S--LttPPctEnvhWfV CAH7_HUMAN 199 S--LttPPlsEsvtWiV CAHP_HUMAN 221 S--LtiPPcsEgvtWiL CAHP_MOUSE 222 S--LtiPPcsEgvtWiL Fitness without relation: 11.2562 Relation between 5 and 6 giving score 11.5579 Statistics: 11.2562 11.5579 S-x(0,2)-L-x(1,2)-P-[APST]-x(2)-[DE]-x(3)-[WY]-x-[GILV],(5,6) D -> (Y), E -> (W), : 11.557949 NR MATCHES 43 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (D,Y)(D,Y) POS 1 2 34 5 6 7 CAH1_HORSE 182 Ss-Ll-PSspDywtYsG CAH1_HORSE 183 S--Ll-PSspDywtYsG CAH1_HUMAN 182 St-Ll-PSslDfwtYpG CAH1_MACMU 182 St-Ll-PSslDfwtYsG CAH1_MACNE 182 St-Ll-PSslDfwtYsG CAH1_MOUSE 182 Ss-Ll-PSslDywtYfG CAH1_MOUSE 183 S--Ll-PSslDywtYfG CAH1_RABIT 157 St-Ll-PPslDywtYsG CAH3_HORSE 180 Sc-Lf-PTcrDywtYrG CAH3_HUMAN 180 Sc-Lf-PAcrDywtYqG CAH3_MOUSE 180 Sc-Lf-PAcrDywtYhG CAH3_RAT 180 Sc-Lf-PAcrDywtYhG CAH5_HUMAN 218 St-Ll-PTcwDywtYaG CAH5_MOUSE 212 Sc-Ll-PAcrDywtYpG CAH5_RAT 217 Sc-Ll-PAcrDywtYpG (E,W)(E,W) POS 1 2 34 5 6 7 CAH1_CHLRE 258 S--LttPPcsEgllWhV CAH1_HORSE 195 SgsLthPPlyEsvtWiV CAH1_HORSE 197 S--LthPPlyEsvtWiV CAH1_HUMAN 197 S--LthPPlyEsvtWiI CAH1_MACMU 195 SgsLthPPlyEsvtWiI CAH1_MACMU 197 S--LthPPlyEsvtWiI CAH1_MACNE 195 SgsLthPPlyEsvtWiI CAH1_MACNE 197 S--LthPPlyEsvtWiI CAH1_MOUSE 197 S--LthPPlhEsvtWvI CAH1_RABIT 170 SgsLthPPlhEsvtWlI CAH1_RABIT 172 S--LthPPlhEsvtWlI CAH2_BOVIN 195 S--LttPPllEsvtWiV CAH2_CHICK 195 S--LttPPlhEcviWhV CAH2_CHLRE 258 S--LttPPcsEgllWhV CAH2_HUMAN 195 S--LttPPllEcvtWiV CAH2_MOUSE 195 S--LttPPllEcvtWiV CAH2_RABIT 195 S--LttPPllEcvtWiV CAH2_RAT 195 S--LttPPllEcvtWiV CAH2_SHEEP 195 S--LtnPPllEsvtWvV CAH4_HUMAN 223 S--LttPTcdEkvvWtV CAH5_HUMAN 233 S--LttPPltEsvtWiI CAH5_MOUSE 227 S--LttPPlaEsvtWiV CAH5_RAT 232 S--LttPPlaEsvtWiV CAH6_HUMAN 218 S--LttPPctEnvhWfV CAH6_SHEEP 201 S--LttPPctEnvhWfV CAH7_HUMAN 199 S--LttPPlsEsvtWiV CAHP_HUMAN 221 S--LtiPPcsEgvtWiL CAHP_MOUSE 222 S--LtiPPcsEgvtWiL ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- HISTONE_H3_1.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID HISTONE_H3_1.pratt2 PA K-[ENQST]-x-[AL]-R-x(1,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DST]-[GT]-[GN]-[ILV]-x(2)-[IP] NR MATCHES 40 POS 1111 11 1111 2 12 34 5 67 8 9 0123 45 6789 0 H31_HUMAN 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 4 KQtARk-StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 4 KQtARk-StGAkAprkQlASKAarkSApaTGGIkkP H32_BOVIN 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H32_BOVIN 79 KTdLRfqSsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 4 KQtARk-StGGkAprkQlATKAarkSAptTGGVkkP H32_MEDSA 79 KTdLRfqShAVlAl--QeAAEAylvGLfeDTNLcaI H32_ORYSA 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 4 KQtARk-StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 4 KQtARk-StGAeAprkQlASKAarkSApaTGGIkkP H32_TETPY 4 KQtARk-StGVkAprkQlATKAarkSApvSGGVkkP H32_XENLA 4 KQtARk-StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 4 KQtARk-StGGkAprkQlATKAarkSApsTGGVkkP H33_HUMAN 79 KTdLRfqSaAIgAl--QeASEAylvGLfeDTNLcaI H33_SCHPO 4 KQtARk-StGGkAprkQlASKAarkAApaTGGVkkP H33_TETTH 4 KQtARk-StGVkAprkQlATKAarkSApvSGGVkkP H34_CAIMO 79 KTdLRfqSsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 78 KTdLRfqSaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 4 KQtARk-StGGkAprkQlATKAaakSApaTGGVkkP H3_ACRFO 79 KTdLRfqSsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 4 KQtARk-StGGkAprkQlATKAarkSApaSGGVkkP H3_CAEEL 79 KTdLRfqSsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_DROME 79 KTdLRfqSsAVmAl--QeASEAylvALfeDTNLcaI H3_EMENI 4 KQtARk-StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_ENCAL 79 KTdLRfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 78 KSdLRfqSaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 24 KTdLRfqShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 73 KEgLRfqSsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 79 KTdLRfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_NEUCR 4 KQtARk-StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_PEA 79 KTdLRfqSsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 79 KTeLRfqSsAVmAl--QeASEAylvGLfeDTNLcaI H3_STRPU 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_VOLCA 78 KTdLRfqSqAVlAl--QeAAEAylvGLfeDTNLcaI H3_YEAST 4 KQtARk-StGGkAprkQlASKAarkSApsTGGVkkP Fitness without relation: 48.3254 Relation between 6 and 20 giving score 48.5754 Statistics: 48.3254 48.5754 RP K-[ENQST]-x-[AL]-R-x(1,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DST]-[GT]-[GN]-[ILV]-x(2)-[IP],(6,20) A -> (I), G -> (P), : 48.575391 NR MATCHES 40 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,I)(A,I) POS 1111 11 1111 2 12 34 5 67 8 9 0123 45 6789 0 H32_BOVIN 79 KTdLRfqSsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 79 KTdLRfqShAVlAl--QeAAEAylvGLfeDTNLcaI H33_HUMAN 79 KTdLRfqSaAIgAl--QeASEAylvGLfeDTNLcaI H34_CAIMO 79 KTdLRfqSsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 78 KTdLRfqSaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 79 KTdLRfqSsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 79 KTdLRfqSsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 79 KTdLRfqSsAVmAl--QeASEAylvALfeDTNLcaI H3_ENCAL 79 KTdLRfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 78 KSdLRfqSaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 24 KTdLRfqShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 73 KEgLRfqSsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 79 KTdLRfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_PEA 79 KTdLRfqSsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 79 KTeLRfqSsAVmAl--QeASEAylvGLfeDTNLcaI H3_VOLCA 78 KTdLRfqSqAVlAl--QeAAEAylvGLfeDTNLcaI (G,P)(G,P) POS 1111 11 1111 2 12 34 5 67 8 9 0123 45 6789 0 H31_HUMAN 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 4 KQtARk-StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 4 KQtARk-StGAkAprkQlASKAarkSApaTGGIkkP H32_BOVIN 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H32_MEDSA 4 KQtARk-StGGkAprkQlATKAarkSAptTGGVkkP H32_ORYSA 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 4 KQtARk-StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 4 KQtARk-StGAeAprkQlASKAarkSApaTGGIkkP H32_TETPY 4 KQtARk-StGVkAprkQlATKAarkSApvSGGVkkP H32_XENLA 4 KQtARk-StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 4 KQtARk-StGGkAprkQlATKAarkSApsTGGVkkP H33_SCHPO 4 KQtARk-StGGkAprkQlASKAarkAApaTGGVkkP H33_TETTH 4 KQtARk-StGVkAprkQlATKAarkSApvSGGVkkP H3_ACRFO 4 KQtARk-StGGkAprkQlATKAaakSApaTGGVkkP H3_CAEEL 4 KQtARk-StGGkAprkQlATKAarkSApaSGGVkkP H3_DROME 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_EMENI 4 KQtARk-StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_NEUCR 4 KQtARk-StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_STRPU 4 KQtARk-StGGkAprkQlATKAarkSApaTGGVkkP H3_YEAST 4 KQtARk-StGGkAprkQlASKAarkSApsTGGVkkP ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(3,4)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV]-x-[AL]-x(2)-[DK]-[QT]-x-[AL]-[ACST]-x-[AI]-x(2)-K-x-[AIV]-[PST]-x(2)-[GP]-x(3)-[KQ]-[LP] NR MATCHES 44 POS 1 11 1 1 11 1 11 1 234 56 7 8 90 12 3 4 56 7 89 H31_HUMAN 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H31_HUMAN 88 AvmalQEAcEAylVgLfeDTnLCaIhaKrVTimPkdiQL H31_SCHPO 1 Artk-QTArKStgGkAprKQlASkAarKaAPatGgvkKP H31_SCHPO 88 AigalQEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H31_TETPY 1 Artk-QTArKStgAkAprKQlASkAarKsAPatGgikKP H32_BOVIN 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_BOVIN 88 AvmalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_MEDSA 1 Artk-QTArKStgGkAprKQlATkAarKsAPttGgvkKP H32_MEDSA 88 AvlalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_ORYSA 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_TETAM 1 Artk-QTArKStgAkAprKQlASkAarKsAPatGgikKP H32_TETBO 1 Arak-QTArKStgAeAprKQlASkAarKsAPatGgikKP H32_TETPY 1 Artk-QTArKStgVkAprKQlATkAarKsAPvsGgvkKP H32_XENLA 88 AvmalQEAsEAylVaLfeDTnLCaIhaKrVTimPkdiQL H33_HUMAN 1 Artk-QTArKStgGkAprKQlATkAarKsAPstGgvkKP H33_HUMAN 88 AigalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H33_SCHPO 1 Artk-QTArKStgGkAprKQlASkAarKaAPatGgvkKP H33_SCHPO 88 AigalQEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H33_TETTH 1 Artk-QTArKStgVkAprKQlATkAarKsAPvsGgvkKP H34_CAIMO 88 AvmalQEAsEAylVgLfeDTnLCaIhaKrVSimPkdiQL H34_MOUSE 87 AigalQEAsEAnrVgLfeDTnLCaIhaKcVTviPkdiQL H3_ACRFO 1 Artk-QTArKStgGkAprKQlATkAaaKsAPatGgvkKP H3_ACRFO 88 AvlalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_CAEEL 1 Artk-QTArKStgGkAprKQlATkAarKsAPasGgvkKP H3_CAEEL 88 AvmalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_DROME 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_DROME 88 AvmalQEAsEAylVaLfeDTnLCaIhaKrITimPkdiQL H3_EMENI 1 Artk-QTArKStgGkAprKQlASkAarKaAPstGgvkKP H3_ENCAL 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_ENCAL 88 AvaalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_ENTHI 87 AisalQEAaEAylVgLfeDTnLCaIhaKrITimPkdmQL H3_HORVU 33 AvlalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_LEIIN 82 AimalQEAtEAyiVsLmaDTnLAcIhaKrVTiqPkdiQL H3_MAIZE 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_MAIZE 88 AvaalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_NEUCR 1 Artk-QTArKStgGkAprKQlASkAarKsAPstGgvkKP H3_PEA 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_PEA 88 AvsalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_PSAMI 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_PSAMI 88 AvmalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_STRPU 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_STRPU 88 AvmalQEAsEAylVrLfeDTnLCaIhaKrVTimPkdiQL H3_VOLCA 87 AvlalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_YEAST 1 Artk-QTArKStgGkAprKQlASkAarKsAPstGgvkKP Fitness without relation: 46.8171 Relation between 11 and 19 giving score 47.1352 Statistics: 46.8171 47.1352 A-x(3,4)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV]-x-[AL]-x(2)-[DK]-[QT]-x-[AL]-[ACST]-x-[AI]-x(2)-K-x-[AIV]-[PST]-x(2)-[GP]-x(3)-[KQ]-[LP],(11,19) A -> (P), L -> (L), : 47.135195 NR MATCHES 44 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,P)(A,P) POS 1 11 1 1 11 1 11 1 234 56 7 8 90 12 3 4 56 7 89 H31_HUMAN 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H31_SCHPO 1 Artk-QTArKStgGkAprKQlASkAarKaAPatGgvkKP H31_TETPY 1 Artk-QTArKStgAkAprKQlASkAarKsAPatGgikKP H32_BOVIN 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_MEDSA 1 Artk-QTArKStgGkAprKQlATkAarKsAPttGgvkKP H32_ORYSA 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_TETAM 1 Artk-QTArKStgAkAprKQlASkAarKsAPatGgikKP H32_TETBO 1 Arak-QTArKStgAeAprKQlASkAarKsAPatGgikKP H32_TETPY 1 Artk-QTArKStgVkAprKQlATkAarKsAPvsGgvkKP H33_HUMAN 1 Artk-QTArKStgGkAprKQlATkAarKsAPstGgvkKP H33_SCHPO 1 Artk-QTArKStgGkAprKQlASkAarKaAPatGgvkKP H33_TETTH 1 Artk-QTArKStgVkAprKQlATkAarKsAPvsGgvkKP H3_ACRFO 1 Artk-QTArKStgGkAprKQlATkAaaKsAPatGgvkKP H3_CAEEL 1 Artk-QTArKStgGkAprKQlATkAarKsAPasGgvkKP H3_DROME 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_EMENI 1 Artk-QTArKStgGkAprKQlASkAarKaAPstGgvkKP H3_ENCAL 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_MAIZE 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_NEUCR 1 Artk-QTArKStgGkAprKQlASkAarKsAPstGgvkKP H3_PEA 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_PSAMI 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_STRPU 1 Artk-QTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_YEAST 1 Artk-QTArKStgGkAprKQlASkAarKsAPstGgvkKP (L,L)(L,L) POS 1 11 1 1 11 1 11 1 234 56 7 8 90 12 3 4 56 7 89 H31_HUMAN 88 AvmalQEAcEAylVgLfeDTnLCaIhaKrVTimPkdiQL H31_SCHPO 88 AigalQEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H32_BOVIN 88 AvmalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_MEDSA 88 AvlalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_XENLA 88 AvmalQEAsEAylVaLfeDTnLCaIhaKrVTimPkdiQL H33_HUMAN 88 AigalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H33_SCHPO 88 AigalQEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H34_CAIMO 88 AvmalQEAsEAylVgLfeDTnLCaIhaKrVSimPkdiQL H34_MOUSE 87 AigalQEAsEAnrVgLfeDTnLCaIhaKcVTviPkdiQL H3_ACRFO 88 AvlalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_CAEEL 88 AvmalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_DROME 88 AvmalQEAsEAylVaLfeDTnLCaIhaKrITimPkdiQL H3_ENCAL 88 AvaalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_ENTHI 87 AisalQEAaEAylVgLfeDTnLCaIhaKrITimPkdmQL H3_HORVU 33 AvlalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_LEIIN 82 AimalQEAtEAyiVsLmaDTnLAcIhaKrVTiqPkdiQL H3_MAIZE 88 AvaalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_PEA 88 AvsalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_PSAMI 88 AvmalQEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_STRPU 88 AvmalQEAsEAylVrLfeDTnLCaIhaKrVTimPkdiQL H3_VOLCA 87 AvlalQEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(1,3)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV]-x-[AL]-x(2)-[DK]-[QT]-x-[AL]-[ACST]-x-[AI]-x(2)-K-x-[AIV]-[PST]-x(2)-[GP]-x(3)-[KQ]-[LP] NR MATCHES 47 POS 1 11 1 1 11 1 11 1 234 56 7 8 90 12 3 4 56 7 89 H31_HUMAN 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H31_HUMAN 91 Al--QEAcEAylVgLfeDTnLCaIhaKrVTimPkdiQL H31_SCHPO 1 ArtkQTArKStgGkAprKQlASkAarKaAPatGgvkKP H31_SCHPO 91 Al--QEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H31_TETPY 1 ArtkQTArKStgAkAprKQlASkAarKsAPatGgikKP H32_BOVIN 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_BOVIN 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_MEDSA 1 ArtkQTArKStgGkAprKQlATkAarKsAPttGgvkKP H32_MEDSA 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_ORYSA 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_TETAM 1 ArtkQTArKStgAkAprKQlASkAarKsAPatGgikKP H32_TETBO 1 ArakQTArKStgAeAprKQlASkAarKsAPatGgikKP H32_TETBO 3 Ak--QTArKStgAeAprKQlASkAarKsAPatGgikKP H32_TETPY 1 ArtkQTArKStgVkAprKQlATkAarKsAPvsGgvkKP H32_XENLA 91 Al--QEAsEAylVaLfeDTnLCaIhaKrVTimPkdiQL H33_HUMAN 1 ArtkQTArKStgGkAprKQlATkAarKsAPstGgvkKP H33_HUMAN 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H33_SCHPO 1 ArtkQTArKStgGkAprKQlASkAarKaAPatGgvkKP H33_SCHPO 91 Al--QEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H33_TETTH 1 ArtkQTArKStgVkAprKQlATkAarKsAPvsGgvkKP H34_CAIMO 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVSimPkdiQL H34_MOUSE 90 Al--QEAsEAnrVgLfeDTnLCaIhaKcVTviPkdiQL H3_ACRFO 1 ArtkQTArKStgGkAprKQlATkAaaKsAPatGgvkKP H3_ACRFO 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_CAEEL 1 ArtkQTArKStgGkAprKQlATkAarKsAPasGgvkKP H3_CAEEL 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_DROME 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_DROME 91 Al--QEAsEAylVaLfeDTnLCaIhaKrITimPkdiQL H3_EMENI 1 ArtkQTArKStgGkAprKQlASkAarKaAPstGgvkKP H3_ENCAL 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_ENCAL 90 Aal-QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_ENCAL 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_ENTHI 90 Al--QEAaEAylVgLfeDTnLCaIhaKrITimPkdmQL H3_HORVU 36 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_LEIIN 85 Al--QEAtEAyiVsLmaDTnLAcIhaKrVTiqPkdiQL H3_MAIZE 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_MAIZE 90 Aal-QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_MAIZE 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_NEUCR 1 ArtkQTArKStgGkAprKQlASkAarKsAPstGgvkKP H3_PEA 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_PEA 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_PSAMI 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_PSAMI 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_STRPU 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_STRPU 91 Al--QEAsEAylVrLfeDTnLCaIhaKrVTimPkdiQL H3_VOLCA 90 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_YEAST 1 ArtkQTArKStgGkAprKQlASkAarKsAPstGgvkKP Fitness without relation: 47.1551 Relation between 11 and 19 giving score 47.5167 Statistics: 47.1551 47.5167 A-x(1,3)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV]-x-[AL]-x(2)-[DK]-[QT]-x-[AL]-[ACST]-x-[AI]-x(2)-K-x-[AIV]-[PST]-x(2)-[GP]-x(3)-[KQ]-[LP],(11,19) A -> (P), L -> (L), : 47.516723 NR MATCHES 47 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,P)(A,P) POS 1 11 1 1 11 1 11 1 234 56 7 8 90 12 3 4 56 7 89 H31_HUMAN 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H31_SCHPO 1 ArtkQTArKStgGkAprKQlASkAarKaAPatGgvkKP H31_TETPY 1 ArtkQTArKStgAkAprKQlASkAarKsAPatGgikKP H32_BOVIN 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_MEDSA 1 ArtkQTArKStgGkAprKQlATkAarKsAPttGgvkKP H32_ORYSA 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H32_TETAM 1 ArtkQTArKStgAkAprKQlASkAarKsAPatGgikKP H32_TETBO 1 ArakQTArKStgAeAprKQlASkAarKsAPatGgikKP H32_TETBO 3 Ak--QTArKStgAeAprKQlASkAarKsAPatGgikKP H32_TETPY 1 ArtkQTArKStgVkAprKQlATkAarKsAPvsGgvkKP H33_HUMAN 1 ArtkQTArKStgGkAprKQlATkAarKsAPstGgvkKP H33_SCHPO 1 ArtkQTArKStgGkAprKQlASkAarKaAPatGgvkKP H33_TETTH 1 ArtkQTArKStgVkAprKQlATkAarKsAPvsGgvkKP H3_ACRFO 1 ArtkQTArKStgGkAprKQlATkAaaKsAPatGgvkKP H3_CAEEL 1 ArtkQTArKStgGkAprKQlATkAarKsAPasGgvkKP H3_DROME 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_EMENI 1 ArtkQTArKStgGkAprKQlASkAarKaAPstGgvkKP H3_ENCAL 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_MAIZE 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_NEUCR 1 ArtkQTArKStgGkAprKQlASkAarKsAPstGgvkKP H3_PEA 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_PSAMI 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_STRPU 1 ArtkQTArKStgGkAprKQlATkAarKsAPatGgvkKP H3_YEAST 1 ArtkQTArKStgGkAprKQlASkAarKsAPstGgvkKP (L,L)(L,L) POS 1 11 1 1 11 1 11 1 234 56 7 8 90 12 3 4 56 7 89 H31_HUMAN 91 Al--QEAcEAylVgLfeDTnLCaIhaKrVTimPkdiQL H31_SCHPO 91 Al--QEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H32_BOVIN 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_MEDSA 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H32_XENLA 91 Al--QEAsEAylVaLfeDTnLCaIhaKrVTimPkdiQL H33_HUMAN 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H33_SCHPO 91 Al--QEAvEAylVsLfeDTnLCaIhgKrVTiqPkdmQL H34_CAIMO 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVSimPkdiQL H34_MOUSE 90 Al--QEAsEAnrVgLfeDTnLCaIhaKcVTviPkdiQL H3_ACRFO 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_CAEEL 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_DROME 91 Al--QEAsEAylVaLfeDTnLCaIhaKrITimPkdiQL H3_ENCAL 90 Aal-QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_ENCAL 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_ENTHI 90 Al--QEAaEAylVgLfeDTnLCaIhaKrITimPkdmQL H3_HORVU 36 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_LEIIN 85 Al--QEAtEAyiVsLmaDTnLAcIhaKrVTiqPkdiQL H3_MAIZE 90 Aal-QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_MAIZE 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_PEA 91 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_PSAMI 91 Al--QEAsEAylVgLfeDTnLCaIhaKrVTimPkdiQL H3_STRPU 91 Al--QEAsEAylVrLfeDTnLCaIhaKrVTimPkdiQL H3_VOLCA 90 Al--QEAaEAylVgLfeDTnLCaIhaKrVTimPkdiQL ----------------------------------------- ID HISTONE_H3_1.pratt2 PA K-x(2,3)-R-x(1,2)-S-x-[AG]-[AGIV]-x-A-[LP]-[QR]-[EK]-x(3)-[AST]-x(2)-[AV]-x(4)-[DP]-[AST]-[NT]-[GL]-[ACG]-x(2)-[HK]-[AP]-[HKR] NR MATCHES 44 POS 1 1 11111 111 1 2 3 45 6789 0 1 23456 789 H31_HUMAN 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H31_HUMAN 79 KtdlRfqSsAVmALQEaceAylVglfeDTNLCaiHAK H31_SCHPO 4 KqtaRk-StGGkAPRKqlaSkaArkaaPATGGvkKPH H31_TETPY 4 KqtaRk-StGAkAPRKqlaSkaArksaPATGGikKPH H31_TETPY 79 KaelRfqSsAVlALQEaaeAylVglfeDTNLCaiHAR H32_BOVIN 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H32_BOVIN 79 KtdlRfqSsAVmALQEaseAylVglfeDTNLCaiHAK H32_MEDSA 4 KqtaRk-StGGkAPRKqlaTkaArksaPTTGGvkKPH H32_MEDSA 79 KtdlRfqShAVlALQEaaeAylVglfeDTNLCaiHAK H32_ORYSA 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H32_TETAM 4 KqtaRk-StGAkAPRKqlaSkaArksaPATGGikKPH H32_TETBO 4 KqtaRk-StGAeAPRKqlaSkaArksaPATGGikKPH H32_TETPY 79 KndiRfqSqAIlALQEaaeAylVglfeDTNLCaiHAR H32_XENLA 4 KqtaRk-StGGkAPRKqlvTkaAkkcaPATGGvkKPH H33_HUMAN 4 KqtaRk-StGGkAPRKqlaTkaArksaPSTGGvkKPH H33_HUMAN 79 KtdlRfqSaAIgALQEaseAylVglfeDTNLCaiHAK H33_SCHPO 4 KqtaRk-StGGkAPRKqlaSkaArkaaPATGGvkKPH H33_TETTH 79 KsdiRfqSqAIlALQEaaeAylVglfeDTNLCaiHAR H34_CAIMO 79 KtdlRfqSsAVmALQEaseAylVglfeDTNLCaiHAK H34_MOUSE 78 KtdlRfqSaAIgALQEaseAnrVglfeDTNLCaiHAK H3_ACRFO 4 KqtaRk-StGGkAPRKqlaTkaAaksaPATGGvkKPH H3_ACRFO 79 KtdlRfqSsAVlALQEaseAylVglfeDTNLCaiHAK H3_CAEEL 79 KtdlRfqSsAVmALQEaaeAylVglfeDTNLCaiHAK H3_DROME 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_DROME 79 KtdlRfqSsAVmALQEaseAylValfeDTNLCaiHAK H3_EMENI 4 KqtaRk-StGGkAPRKqlaSkaArkaaPSTGGvkKPH H3_EMENI 79 KsdlRfqSsAIgALQEsveAylVslfeDTNLCaiHAK H3_ENCAL 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_ENCAL 79 KtdlRfqSsAVaALQEaaeAylVglfeDTNLCaiHAK H3_ENTHI 78 KsdlRfqSaAIsALQEaaeAylVglfeDTNLCaiHAK H3_HORVU 24 KtdlRfqShAVlALQEaaeAylVglfeDTNLCaiHAK H3_LEIIN 73 KeglRfqSsAImALQEateAyiVslmaDTNLAciHAK H3_MAIZE 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_MAIZE 79 KtdlRfqSsAVaALQEaaeAylVglfeDTNLCaiHAK H3_NEUCR 4 KqtaRk-StGGkAPRKqlaSkaArksaPSTGGvkKPH H3_PEA 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_PEA 79 KtdlRfqSsAVsALQEaaeAylVglfeDTNLCaiHAK H3_PSAMI 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_PSAMI 79 KtelRfqSsAVmALQEaseAylVglfeDTNLCaiHAK H3_STRPU 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_STRPU 79 KtelRfqSsAVmALQEaseAylVrlfeDTNLCaiHAK H3_VOLCA 78 KtdlRfqSqAVlALQEaaeAylVglfeDTNLCaiHAK H3_YEAST 4 KqtaRk-StGGkAPRKqlaSkaArksaPSTGGvkKPH H3_YEAST 79 KtdlRfqSsAIgALQEsveAylVslfeDTNLAaiHAK Fitness without relation: 46.4376 Relation between 4 and 18 giving score 46.7558 Statistics: 46.4376 46.7558 K-x(2,3)-R-x(1,2)-S-x-[AG]-[AGIV]-x-A-[LP]-[QR]-[EK]-x(3)-[AST]-x(2)-[AV]-x(4)-[DP]-[AST]-[NT]-[GL]-[ACG]-x(2)-[HK]-[AP]-[HKR],(4,18) A -> (A), G -> (P), : 46.755772 NR MATCHES 44 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,A)(A,A) POS 1 1 11111 111 1 2 3 45 6789 0 1 23456 789 H31_HUMAN 79 KtdlRfqSsAVmALQEaceAylVglfeDTNLCaiHAK H31_TETPY 79 KaelRfqSsAVlALQEaaeAylVglfeDTNLCaiHAR H32_BOVIN 79 KtdlRfqSsAVmALQEaseAylVglfeDTNLCaiHAK H32_MEDSA 79 KtdlRfqShAVlALQEaaeAylVglfeDTNLCaiHAK H32_TETPY 79 KndiRfqSqAIlALQEaaeAylVglfeDTNLCaiHAR H33_HUMAN 79 KtdlRfqSaAIgALQEaseAylVglfeDTNLCaiHAK H33_TETTH 79 KsdiRfqSqAIlALQEaaeAylVglfeDTNLCaiHAR H34_CAIMO 79 KtdlRfqSsAVmALQEaseAylVglfeDTNLCaiHAK H34_MOUSE 78 KtdlRfqSaAIgALQEaseAnrVglfeDTNLCaiHAK H3_ACRFO 79 KtdlRfqSsAVlALQEaseAylVglfeDTNLCaiHAK H3_CAEEL 79 KtdlRfqSsAVmALQEaaeAylVglfeDTNLCaiHAK H3_DROME 79 KtdlRfqSsAVmALQEaseAylValfeDTNLCaiHAK H3_EMENI 79 KsdlRfqSsAIgALQEsveAylVslfeDTNLCaiHAK H3_ENCAL 79 KtdlRfqSsAVaALQEaaeAylVglfeDTNLCaiHAK H3_ENTHI 78 KsdlRfqSaAIsALQEaaeAylVglfeDTNLCaiHAK H3_HORVU 24 KtdlRfqShAVlALQEaaeAylVglfeDTNLCaiHAK H3_LEIIN 73 KeglRfqSsAImALQEateAyiVslmaDTNLAciHAK H3_MAIZE 79 KtdlRfqSsAVaALQEaaeAylVglfeDTNLCaiHAK H3_PEA 79 KtdlRfqSsAVsALQEaaeAylVglfeDTNLCaiHAK H3_PSAMI 79 KtelRfqSsAVmALQEaseAylVglfeDTNLCaiHAK H3_STRPU 79 KtelRfqSsAVmALQEaseAylVrlfeDTNLCaiHAK H3_VOLCA 78 KtdlRfqSqAVlALQEaaeAylVglfeDTNLCaiHAK H3_YEAST 79 KtdlRfqSsAIgALQEsveAylVslfeDTNLAaiHAK (G,P)(G,P) POS 1 1 11111 111 1 2 3 45 6789 0 1 23456 789 H31_HUMAN 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H31_SCHPO 4 KqtaRk-StGGkAPRKqlaSkaArkaaPATGGvkKPH H31_TETPY 4 KqtaRk-StGAkAPRKqlaSkaArksaPATGGikKPH H32_BOVIN 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H32_MEDSA 4 KqtaRk-StGGkAPRKqlaTkaArksaPTTGGvkKPH H32_ORYSA 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H32_TETAM 4 KqtaRk-StGAkAPRKqlaSkaArksaPATGGikKPH H32_TETBO 4 KqtaRk-StGAeAPRKqlaSkaArksaPATGGikKPH H32_XENLA 4 KqtaRk-StGGkAPRKqlvTkaAkkcaPATGGvkKPH H33_HUMAN 4 KqtaRk-StGGkAPRKqlaTkaArksaPSTGGvkKPH H33_SCHPO 4 KqtaRk-StGGkAPRKqlaSkaArkaaPATGGvkKPH H3_ACRFO 4 KqtaRk-StGGkAPRKqlaTkaAaksaPATGGvkKPH H3_DROME 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_EMENI 4 KqtaRk-StGGkAPRKqlaSkaArkaaPSTGGvkKPH H3_ENCAL 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_MAIZE 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_NEUCR 4 KqtaRk-StGGkAPRKqlaSkaArksaPSTGGvkKPH H3_PEA 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_PSAMI 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_STRPU 4 KqtaRk-StGGkAPRKqlaTkaArksaPATGGvkKPH H3_YEAST 4 KqtaRk-StGGkAPRKqlaSkaArksaPSTGGvkKPH ----------------------------------------- ID HISTONE_H3_1.pratt2 PA R-x(1,2)-S-x(2,4)-A-[LP]-[QR]-[EK]-x(3)-[AST]-[KY]-[AIL]-[AV]-x(4)-[DP]-[AST]-[NT]-[GL]-[ACG]-x(2)-[HK]-[AGPS]-[HKR] NR MATCHES 46 POS 1 11111 111 1 2 3456 7890 12345 678 H31_HUMAN 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H31_HUMAN 83 RfqSsavmALQEaceAYLVglfeDTNLCaiHAK H31_SCHPO 8 Rk-StggkAPRKqlaSKAArkaaPATGGvkKPH H31_SCHPO 83 RfqSsaigALQEaveAYLVslfeDTNLCaiHGK H31_TETPY 8 Rk-StgakAPRKqlaSKAArksaPATGGikKPH H31_TETPY 83 RfqSsavlALQEaaeAYLVglfeDTNLCaiHAR H32_BOVIN 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H32_BOVIN 83 RfqSsavmALQEaseAYLVglfeDTNLCaiHAK H32_MEDSA 8 Rk-StggkAPRKqlaTKAArksaPTTGGvkKPH H32_MEDSA 83 RfqShavlALQEaaeAYLVglfeDTNLCaiHAK H32_ORYSA 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H32_TETAM 8 Rk-StgakAPRKqlaSKAArksaPATGGikKPH H32_TETBO 8 Rk-StgaeAPRKqlaSKAArksaPATGGikKPH H32_TETPY 83 RfqSqailALQEaaeAYLVglfeDTNLCaiHAR H32_XENLA 8 Rk-StggkAPRKqlvTKAAkkcaPATGGvkKPH H33_HUMAN 8 Rk-StggkAPRKqlaTKAArksaPSTGGvkKPH H33_HUMAN 83 RfqSaaigALQEaseAYLVglfeDTNLCaiHAK H33_SCHPO 8 Rk-StggkAPRKqlaSKAArkaaPATGGvkKPH H33_SCHPO 83 RfqSsaigALQEaveAYLVslfeDTNLCaiHGK H33_TETTH 83 RfqSqailALQEaaeAYLVglfeDTNLCaiHAR H34_CAIMO 83 RfqSsavmALQEaseAYLVglfeDTNLCaiHAK H34_MOUSE 8 Rk-StcgkAPRKqlaTKAAxksaPSTGGvkKSH H3_ACRFO 8 Rk-StggkAPRKqlaTKAAaksaPATGGvkKPH H3_ACRFO 83 RfqSsavlALQEaseAYLVglfeDTNLCaiHAK H3_CAEEL 83 RfqSsavmALQEaaeAYLVglfeDTNLCaiHAK H3_DROME 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_DROME 83 RfqSsavmALQEaseAYLValfeDTNLCaiHAK H3_EMENI 8 Rk-StggkAPRKqlaSKAArkaaPSTGGvkKPH H3_EMENI 83 RfqSsaigALQEsveAYLVslfeDTNLCaiHAK H3_ENCAL 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_ENCAL 83 RfqSsavaALQEaaeAYLVglfeDTNLCaiHAK H3_ENTHI 82 RfqSaaisALQEaaeAYLVglfeDTNLCaiHAK H3_HORVU 28 RfqShavlALQEaaeAYLVglfeDTNLCaiHAK H3_LEIIN 77 RfqSsaimALQEateAYIVslmaDTNLAciHAK H3_MAIZE 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_MAIZE 83 RfqSsavaALQEaaeAYLVglfeDTNLCaiHAK H3_NEUCR 8 Rk-StggkAPRKqlaSKAArksaPSTGGvkKPH H3_PEA 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_PEA 83 RfqSsavsALQEaaeAYLVglfeDTNLCaiHAK H3_PSAMI 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_PSAMI 83 RfqSsavmALQEaseAYLVglfeDTNLCaiHAK H3_STRPU 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_STRPU 83 RfqSsavmALQEaseAYLVrlfeDTNLCaiHAK H3_VOLCA 82 RfqSqavlALQEaaeAYLVglfeDTNLCaiHAK H3_YEAST 8 Rk-StggkAPRKqlaSKAArksaPSTGGvkKPH H3_YEAST 83 RfqSsaigALQEsveAYLVslfeDTNLAaiHAK Fitness without relation: 42.4730 Relation between 14 and 16 giving score 42.8206 Statistics: 42.4730 42.8206 R-x(1,2)-S-x(2,4)-A-[LP]-[QR]-[EK]-x(3)-[AST]-[KY]-[AIL]-[AV]-x(4)-[DP]-[AST]-[NT]-[GL]-[ACG]-x(2)-[HK]-[AGPS]-[HKR],(14,16) G -> (K), L -> (H), : 42.820616 NR MATCHES 46 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,K)(G,K) POS 1 11111 111 1 2 3456 7890 12345 678 H31_HUMAN 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H31_SCHPO 8 Rk-StggkAPRKqlaSKAArkaaPATGGvkKPH H31_TETPY 8 Rk-StgakAPRKqlaSKAArksaPATGGikKPH H32_BOVIN 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H32_MEDSA 8 Rk-StggkAPRKqlaTKAArksaPTTGGvkKPH H32_ORYSA 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H32_TETAM 8 Rk-StgakAPRKqlaSKAArksaPATGGikKPH H32_TETBO 8 Rk-StgaeAPRKqlaSKAArksaPATGGikKPH H32_XENLA 8 Rk-StggkAPRKqlvTKAAkkcaPATGGvkKPH H33_HUMAN 8 Rk-StggkAPRKqlaTKAArksaPSTGGvkKPH H33_SCHPO 8 Rk-StggkAPRKqlaSKAArkaaPATGGvkKPH H34_MOUSE 8 Rk-StcgkAPRKqlaTKAAxksaPSTGGvkKSH H3_ACRFO 8 Rk-StggkAPRKqlaTKAAaksaPATGGvkKPH H3_DROME 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_EMENI 8 Rk-StggkAPRKqlaSKAArkaaPSTGGvkKPH H3_ENCAL 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_MAIZE 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_NEUCR 8 Rk-StggkAPRKqlaSKAArksaPSTGGvkKPH H3_PEA 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_PSAMI 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_STRPU 8 Rk-StggkAPRKqlaTKAArksaPATGGvkKPH H3_YEAST 8 Rk-StggkAPRKqlaSKAArksaPSTGGvkKPH (L,H)(L,H) POS 1 11111 111 1 2 3456 7890 12345 678 H31_HUMAN 83 RfqSsavmALQEaceAYLVglfeDTNLCaiHAK H31_SCHPO 83 RfqSsaigALQEaveAYLVslfeDTNLCaiHGK H31_TETPY 83 RfqSsavlALQEaaeAYLVglfeDTNLCaiHAR H32_BOVIN 83 RfqSsavmALQEaseAYLVglfeDTNLCaiHAK H32_MEDSA 83 RfqShavlALQEaaeAYLVglfeDTNLCaiHAK H32_TETPY 83 RfqSqailALQEaaeAYLVglfeDTNLCaiHAR H33_HUMAN 83 RfqSaaigALQEaseAYLVglfeDTNLCaiHAK H33_SCHPO 83 RfqSsaigALQEaveAYLVslfeDTNLCaiHGK H33_TETTH 83 RfqSqailALQEaaeAYLVglfeDTNLCaiHAR H34_CAIMO 83 RfqSsavmALQEaseAYLVglfeDTNLCaiHAK H3_ACRFO 83 RfqSsavlALQEaseAYLVglfeDTNLCaiHAK H3_CAEEL 83 RfqSsavmALQEaaeAYLVglfeDTNLCaiHAK H3_DROME 83 RfqSsavmALQEaseAYLValfeDTNLCaiHAK H3_EMENI 83 RfqSsaigALQEsveAYLVslfeDTNLCaiHAK H3_ENCAL 83 RfqSsavaALQEaaeAYLVglfeDTNLCaiHAK H3_ENTHI 82 RfqSaaisALQEaaeAYLVglfeDTNLCaiHAK H3_HORVU 28 RfqShavlALQEaaeAYLVglfeDTNLCaiHAK H3_LEIIN 77 RfqSsaimALQEateAYIVslmaDTNLAciHAK H3_MAIZE 83 RfqSsavaALQEaaeAYLVglfeDTNLCaiHAK H3_PEA 83 RfqSsavsALQEaaeAYLVglfeDTNLCaiHAK H3_PSAMI 83 RfqSsavmALQEaseAYLVglfeDTNLCaiHAK H3_STRPU 83 RfqSsavmALQEaseAYLVrlfeDTNLCaiHAK H3_VOLCA 82 RfqSqavlALQEaaeAYLVglfeDTNLCaiHAK H3_YEAST 83 RfqSsaigALQEsveAYLVslfeDTNLAaiHAK ----------------------------------------- ID HISTONE_H3_1.pratt2 PA R-x(1,3)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP] NR MATCHES 40 POS 1 11 1111 1 1 2 34 5 6 7890 12 3456 7 H31_HUMAN 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 8 Rk--StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 8 Rk--StGAkAprkQlASKAarkSApaTGGIkkP H31_TETPY 83 Rfq-SsAVlAl--QeAAEAylvGLfeDTNLcaI H32_BOVIN 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H32_BOVIN 83 Rfq-SsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 8 Rk--StGGkAprkQlATKAarkSAptTGGVkkP H32_MEDSA 83 Rfq-ShAVlAl--QeAAEAylvGLfeDTNLcaI H32_ORYSA 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 8 Rk--StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 8 Rk--StGAeAprkQlASKAarkSApaTGGIkkP H32_TETPY 83 Rfq-SqAIlAl--QeAAEAylvGLfeDTNLcaI H32_XENLA 8 Rk--StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 8 Rk--StGGkAprkQlATKAarkSApsTGGVkkP H33_HUMAN 83 Rfq-SaAIgAl--QeASEAylvGLfeDTNLcaI H33_SCHPO 8 Rk--StGGkAprkQlASKAarkAApaTGGVkkP H33_TETTH 83 Rfq-SqAIlAl--QeAAEAylvGLfeDTNLcaI H34_CAIMO 83 Rfq-SsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 82 Rfq-SaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 8 Rk--StGGkAprkQlATKAaakSApaTGGVkkP H3_ACRFO 83 Rfq-SsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 83 Rfq-SsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_DROME 83 Rfq-SsAVmAl--QeASEAylvALfeDTNLcaI H3_EMENI 8 Rk--StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_ENCAL 83 Rfq-SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 82 Rfq-SaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 28 Rfq-ShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 77 Rfq-SsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 83 Rfq-SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_NEUCR 8 Rk--StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_PEA 83 Rfq-SsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 83 Rfq-SsAVmAl--QeASEAylvGLfeDTNLcaI H3_STRPU 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_VOLCA 82 Rfq-SqAVlAl--QeAAEAylvGLfeDTNLcaI H3_YEAST 8 Rk--StGGkAprkQlASKAarkSApsTGGVkkP Fitness without relation: 40.5010 Relation between 3 and 17 giving score 40.7509 Statistics: 40.5010 40.7509 R-x(1,3)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP],(3,17) A -> (I), G -> (P), : 40.750906 NR MATCHES 40 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,I)(A,I) POS 1 11 1111 1 1 2 34 5 6 7890 12 3456 7 H31_TETPY 83 Rfq-SsAVlAl--QeAAEAylvGLfeDTNLcaI H32_BOVIN 83 Rfq-SsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 83 Rfq-ShAVlAl--QeAAEAylvGLfeDTNLcaI H32_TETPY 83 Rfq-SqAIlAl--QeAAEAylvGLfeDTNLcaI H33_HUMAN 83 Rfq-SaAIgAl--QeASEAylvGLfeDTNLcaI H33_TETTH 83 Rfq-SqAIlAl--QeAAEAylvGLfeDTNLcaI H34_CAIMO 83 Rfq-SsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 82 Rfq-SaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 83 Rfq-SsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 83 Rfq-SsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 83 Rfq-SsAVmAl--QeASEAylvALfeDTNLcaI H3_ENCAL 83 Rfq-SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 82 Rfq-SaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 28 Rfq-ShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 77 Rfq-SsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 83 Rfq-SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_PEA 83 Rfq-SsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 83 Rfq-SsAVmAl--QeASEAylvGLfeDTNLcaI H3_VOLCA 82 Rfq-SqAVlAl--QeAAEAylvGLfeDTNLcaI (G,P)(G,P) POS 1 11 1111 1 1 2 34 5 6 7890 12 3456 7 H31_HUMAN 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 8 Rk--StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 8 Rk--StGAkAprkQlASKAarkSApaTGGIkkP H32_BOVIN 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H32_MEDSA 8 Rk--StGGkAprkQlATKAarkSAptTGGVkkP H32_ORYSA 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 8 Rk--StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 8 Rk--StGAeAprkQlASKAarkSApaTGGIkkP H32_XENLA 8 Rk--StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 8 Rk--StGGkAprkQlATKAarkSApsTGGVkkP H33_SCHPO 8 Rk--StGGkAprkQlASKAarkAApaTGGVkkP H3_ACRFO 8 Rk--StGGkAprkQlATKAaakSApaTGGVkkP H3_DROME 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_EMENI 8 Rk--StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_NEUCR 8 Rk--StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_STRPU 8 Rk--StGGkAprkQlATKAarkSApaTGGVkkP H3_YEAST 8 Rk--StGGkAprkQlASKAarkSApsTGGVkkP ----------------------------------------- ID HISTONE_H3_1.pratt2 PA R-x(0,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP] NR MATCHES 40 POS 1 11 1111 1 1 2 34 5 6 7890 12 3456 7 H31_HUMAN 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 8 Rk-StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 8 Rk-StGAkAprkQlASKAarkSApaTGGIkkP H31_TETPY 83 RfqSsAVlAl--QeAAEAylvGLfeDTNLcaI H32_BOVIN 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H32_BOVIN 83 RfqSsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 8 Rk-StGGkAprkQlATKAarkSAptTGGVkkP H32_MEDSA 83 RfqShAVlAl--QeAAEAylvGLfeDTNLcaI H32_ORYSA 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 8 Rk-StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 8 Rk-StGAeAprkQlASKAarkSApaTGGIkkP H32_TETPY 83 RfqSqAIlAl--QeAAEAylvGLfeDTNLcaI H32_XENLA 8 Rk-StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 8 Rk-StGGkAprkQlATKAarkSApsTGGVkkP H33_HUMAN 83 RfqSaAIgAl--QeASEAylvGLfeDTNLcaI H33_SCHPO 8 Rk-StGGkAprkQlASKAarkAApaTGGVkkP H33_TETTH 83 RfqSqAIlAl--QeAAEAylvGLfeDTNLcaI H34_CAIMO 83 RfqSsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 82 RfqSaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 8 Rk-StGGkAprkQlATKAaakSApaTGGVkkP H3_ACRFO 83 RfqSsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 83 RfqSsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_DROME 83 RfqSsAVmAl--QeASEAylvALfeDTNLcaI H3_EMENI 8 Rk-StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_ENCAL 83 RfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 82 RfqSaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 28 RfqShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 77 RfqSsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 83 RfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_NEUCR 8 Rk-StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_PEA 83 RfqSsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 83 RfqSsAVmAl--QeASEAylvGLfeDTNLcaI H3_STRPU 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_VOLCA 82 RfqSqAVlAl--QeAAEAylvGLfeDTNLcaI H3_YEAST 8 Rk-StGGkAprkQlASKAarkSApsTGGVkkP Fitness without relation: 40.5010 Relation between 3 and 17 giving score 40.7509 Statistics: 40.5010 40.7509 R-x(0,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP],(3,17) A -> (I), G -> (P), : 40.750906 NR MATCHES 40 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,I)(A,I) POS 1 11 1111 1 1 2 34 5 6 7890 12 3456 7 H31_TETPY 83 RfqSsAVlAl--QeAAEAylvGLfeDTNLcaI H32_BOVIN 83 RfqSsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 83 RfqShAVlAl--QeAAEAylvGLfeDTNLcaI H32_TETPY 83 RfqSqAIlAl--QeAAEAylvGLfeDTNLcaI H33_HUMAN 83 RfqSaAIgAl--QeASEAylvGLfeDTNLcaI H33_TETTH 83 RfqSqAIlAl--QeAAEAylvGLfeDTNLcaI H34_CAIMO 83 RfqSsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 82 RfqSaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 83 RfqSsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 83 RfqSsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 83 RfqSsAVmAl--QeASEAylvALfeDTNLcaI H3_ENCAL 83 RfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 82 RfqSaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 28 RfqShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 77 RfqSsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 83 RfqSsAVaAl--QeAAEAylvGLfeDTNLcaI H3_PEA 83 RfqSsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 83 RfqSsAVmAl--QeASEAylvGLfeDTNLcaI H3_VOLCA 82 RfqSqAVlAl--QeAAEAylvGLfeDTNLcaI (G,P)(G,P) POS 1 11 1111 1 1 2 34 5 6 7890 12 3456 7 H31_HUMAN 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 8 Rk-StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 8 Rk-StGAkAprkQlASKAarkSApaTGGIkkP H32_BOVIN 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H32_MEDSA 8 Rk-StGGkAprkQlATKAarkSAptTGGVkkP H32_ORYSA 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 8 Rk-StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 8 Rk-StGAeAprkQlASKAarkSApaTGGIkkP H32_XENLA 8 Rk-StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 8 Rk-StGGkAprkQlATKAarkSApsTGGVkkP H33_SCHPO 8 Rk-StGGkAprkQlASKAarkAApaTGGVkkP H3_ACRFO 8 Rk-StGGkAprkQlATKAaakSApaTGGVkkP H3_DROME 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_EMENI 8 Rk-StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_NEUCR 8 Rk-StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_STRPU 8 Rk-StGGkAprkQlATKAarkSApaTGGVkkP H3_YEAST 8 Rk-StGGkAprkQlASKAarkSApsTGGVkkP ----------------------------------------- ID HISTONE_H3_1.pratt2 PA S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP] NR MATCHES 40 POS 11 1111 1 1 23 4 5 6789 01 2345 6 H31_HUMAN 10 StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 10 StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 10 StGAkAprkQlASKAarkSApaTGGIkkP H31_TETPY 86 SsAVlAl--QeAAEAylvGLfeDTNLcaI H32_BOVIN 10 StGGkAprkQlATKAarkSApaTGGVkkP H32_BOVIN 86 SsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 10 StGGkAprkQlATKAarkSAptTGGVkkP H32_MEDSA 86 ShAVlAl--QeAAEAylvGLfeDTNLcaI H32_ORYSA 10 StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 10 StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 10 StGAeAprkQlASKAarkSApaTGGIkkP H32_TETPY 86 SqAIlAl--QeAAEAylvGLfeDTNLcaI H32_XENLA 10 StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 10 StGGkAprkQlATKAarkSApsTGGVkkP H33_HUMAN 86 SaAIgAl--QeASEAylvGLfeDTNLcaI H33_SCHPO 10 StGGkAprkQlASKAarkAApaTGGVkkP H33_TETTH 86 SqAIlAl--QeAAEAylvGLfeDTNLcaI H34_CAIMO 86 SsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 85 SaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 10 StGGkAprkQlATKAaakSApaTGGVkkP H3_ACRFO 86 SsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 86 SsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_DROME 86 SsAVmAl--QeASEAylvALfeDTNLcaI H3_EMENI 10 StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_ENCAL 86 SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 85 SaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 31 ShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 80 SsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 86 SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_NEUCR 10 StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_PEA 86 SsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 86 SsAVmAl--QeASEAylvGLfeDTNLcaI H3_STRPU 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_VOLCA 85 SqAVlAl--QeAAEAylvGLfeDTNLcaI H3_YEAST 10 StGGkAprkQlASKAarkSApsTGGVkkP Fitness without relation: 36.6559 Relation between 2 and 16 giving score 36.9059 Statistics: 36.6559 36.9059 S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK]-A-x(3)-[ACGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP],(2,16) A -> (I), G -> (P), : 36.905855 NR MATCHES 40 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,I)(A,I) POS 11 1111 1 1 23 4 5 6789 01 2345 6 H31_TETPY 86 SsAVlAl--QeAAEAylvGLfeDTNLcaI H32_BOVIN 86 SsAVmAl--QeASEAylvGLfeDTNLcaI H32_MEDSA 86 ShAVlAl--QeAAEAylvGLfeDTNLcaI H32_TETPY 86 SqAIlAl--QeAAEAylvGLfeDTNLcaI H33_HUMAN 86 SaAIgAl--QeASEAylvGLfeDTNLcaI H33_TETTH 86 SqAIlAl--QeAAEAylvGLfeDTNLcaI H34_CAIMO 86 SsAVmAl--QeASEAylvGLfeDTNLcaI H34_MOUSE 85 SaAIgAl--QeASEAnrvGLfeDTNLcaI H3_ACRFO 86 SsAVlAl--QeASEAylvGLfeDTNLcaI H3_CAEEL 86 SsAVmAl--QeAAEAylvGLfeDTNLcaI H3_DROME 86 SsAVmAl--QeASEAylvALfeDTNLcaI H3_ENCAL 86 SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_ENTHI 85 SaAIsAl--QeAAEAylvGLfeDTNLcaI H3_HORVU 31 ShAVlAl--QeAAEAylvGLfeDTNLcaI H3_LEIIN 80 SsAImAl--QeATEAyivSLmaDTNLacI H3_MAIZE 86 SsAVaAl--QeAAEAylvGLfeDTNLcaI H3_PEA 86 SsAVsAl--QeAAEAylvGLfeDTNLcaI H3_PSAMI 86 SsAVmAl--QeASEAylvGLfeDTNLcaI H3_VOLCA 85 SqAVlAl--QeAAEAylvGLfeDTNLcaI (G,P)(G,P) POS 11 1111 1 1 23 4 5 6789 01 2345 6 H31_HUMAN 10 StGGkAprkQlATKAarkSApaTGGVkkP H31_SCHPO 10 StGGkAprkQlASKAarkAApaTGGVkkP H31_TETPY 10 StGAkAprkQlASKAarkSApaTGGIkkP H32_BOVIN 10 StGGkAprkQlATKAarkSApaTGGVkkP H32_MEDSA 10 StGGkAprkQlATKAarkSAptTGGVkkP H32_ORYSA 10 StGGkAprkQlATKAarkSApaTGGVkkP H32_TETAM 10 StGAkAprkQlASKAarkSApaTGGIkkP H32_TETBO 10 StGAeAprkQlASKAarkSApaTGGIkkP H32_XENLA 10 StGGkAprkQlVTKAakkCApaTGGVkkP H33_HUMAN 10 StGGkAprkQlATKAarkSApsTGGVkkP H33_SCHPO 10 StGGkAprkQlASKAarkAApaTGGVkkP H3_ACRFO 10 StGGkAprkQlATKAaakSApaTGGVkkP H3_DROME 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_EMENI 10 StGGkAprkQlASKAarkAApsTGGVkkP H3_ENCAL 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_MAIZE 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_NEUCR 10 StGGkAprkQlASKAarkSApsTGGVkkP H3_PEA 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_PSAMI 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_STRPU 10 StGGkAprkQlATKAarkSApaTGGVkkP H3_YEAST 10 StGGkAprkQlASKAarkSApsTGGVkkP ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(3,4)-Q-x-A-[AST]-[EK]-A-x(3)-[AGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP] NR MATCHES 40 POS 111 1 1 2 3456 78 9012 3 H31_HUMAN 15 Aprk-QlATKAarkSApaTGGVkkP H31_SCHPO 15 Aprk-QlASKAarkAApaTGGVkkP H31_TETPY 15 Aprk-QlASKAarkSApaTGGIkkP H31_TETPY 88 AvlalQeAAEAylvGLfeDTNLcaI H32_BOVIN 15 Aprk-QlATKAarkSApaTGGVkkP H32_BOVIN 88 AvmalQeASEAylvGLfeDTNLcaI H32_MEDSA 15 Aprk-QlATKAarkSAptTGGVkkP H32_MEDSA 88 AvlalQeAAEAylvGLfeDTNLcaI H32_ORYSA 15 Aprk-QlATKAarkSApaTGGVkkP H32_TETAM 15 Aprk-QlASKAarkSApaTGGIkkP H32_TETBO 15 Aprk-QlASKAarkSApaTGGIkkP H32_TETPY 88 AilalQeAAEAylvGLfeDTNLcaI H32_XENLA 88 AvmalQeASEAylvALfeDTNLcaI H33_HUMAN 15 Aprk-QlATKAarkSApsTGGVkkP H33_HUMAN 88 AigalQeASEAylvGLfeDTNLcaI H33_SCHPO 15 Aprk-QlASKAarkAApaTGGVkkP H33_TETTH 88 AilalQeAAEAylvGLfeDTNLcaI H34_CAIMO 88 AvmalQeASEAylvGLfeDTNLcaI H34_MOUSE 87 AigalQeASEAnrvGLfeDTNLcaI H3_ACRFO 15 Aprk-QlATKAaakSApaTGGVkkP H3_ACRFO 88 AvlalQeASEAylvGLfeDTNLcaI H3_CAEEL 88 AvmalQeAAEAylvGLfeDTNLcaI H3_DROME 15 Aprk-QlATKAarkSApaTGGVkkP H3_DROME 88 AvmalQeASEAylvALfeDTNLcaI H3_EMENI 15 Aprk-QlASKAarkAApsTGGVkkP H3_ENCAL 15 Aprk-QlATKAarkSApaTGGVkkP H3_ENCAL 88 AvaalQeAAEAylvGLfeDTNLcaI H3_ENTHI 87 AisalQeAAEAylvGLfeDTNLcaI H3_HORVU 33 AvlalQeAAEAylvGLfeDTNLcaI H3_LEIIN 82 AimalQeATEAyivSLmaDTNLacI H3_MAIZE 15 Aprk-QlATKAarkSApaTGGVkkP H3_MAIZE 88 AvaalQeAAEAylvGLfeDTNLcaI H3_NEUCR 15 Aprk-QlASKAarkSApsTGGVkkP H3_PEA 15 Aprk-QlATKAarkSApaTGGVkkP H3_PEA 88 AvsalQeAAEAylvGLfeDTNLcaI H3_PSAMI 15 Aprk-QlATKAarkSApaTGGVkkP H3_PSAMI 88 AvmalQeASEAylvGLfeDTNLcaI H3_STRPU 15 Aprk-QlATKAarkSApaTGGVkkP H3_VOLCA 87 AvlalQeAAEAylvGLfeDTNLcaI H3_YEAST 15 Aprk-QlASKAarkSApsTGGVkkP Fitness without relation: 29.8866 Relation between 8 and 13 giving score 30.1365 Statistics: 29.8866 30.1365 A-x(3,4)-Q-x-A-[AST]-[EK]-A-x(3)-[AGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP],(8,13) A -> (P), L -> (I), : 30.136532 NR MATCHES 40 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,P)(A,P) POS 111 1 1 2 3456 78 9012 3 H31_HUMAN 15 Aprk-QlATKAarkSApaTGGVkkP H31_SCHPO 15 Aprk-QlASKAarkAApaTGGVkkP H31_TETPY 15 Aprk-QlASKAarkSApaTGGIkkP H32_BOVIN 15 Aprk-QlATKAarkSApaTGGVkkP H32_MEDSA 15 Aprk-QlATKAarkSAptTGGVkkP H32_ORYSA 15 Aprk-QlATKAarkSApaTGGVkkP H32_TETAM 15 Aprk-QlASKAarkSApaTGGIkkP H32_TETBO 15 Aprk-QlASKAarkSApaTGGIkkP H33_HUMAN 15 Aprk-QlATKAarkSApsTGGVkkP H33_SCHPO 15 Aprk-QlASKAarkAApaTGGVkkP H3_ACRFO 15 Aprk-QlATKAaakSApaTGGVkkP H3_DROME 15 Aprk-QlATKAarkSApaTGGVkkP H3_EMENI 15 Aprk-QlASKAarkAApsTGGVkkP H3_ENCAL 15 Aprk-QlATKAarkSApaTGGVkkP H3_MAIZE 15 Aprk-QlATKAarkSApaTGGVkkP H3_NEUCR 15 Aprk-QlASKAarkSApsTGGVkkP H3_PEA 15 Aprk-QlATKAarkSApaTGGVkkP H3_PSAMI 15 Aprk-QlATKAarkSApaTGGVkkP H3_STRPU 15 Aprk-QlATKAarkSApaTGGVkkP H3_YEAST 15 Aprk-QlASKAarkSApsTGGVkkP (L,I)(L,I) POS 111 1 1 2 3456 78 9012 3 H31_TETPY 88 AvlalQeAAEAylvGLfeDTNLcaI H32_BOVIN 88 AvmalQeASEAylvGLfeDTNLcaI H32_MEDSA 88 AvlalQeAAEAylvGLfeDTNLcaI H32_TETPY 88 AilalQeAAEAylvGLfeDTNLcaI H32_XENLA 88 AvmalQeASEAylvALfeDTNLcaI H33_HUMAN 88 AigalQeASEAylvGLfeDTNLcaI H33_TETTH 88 AilalQeAAEAylvGLfeDTNLcaI H34_CAIMO 88 AvmalQeASEAylvGLfeDTNLcaI H34_MOUSE 87 AigalQeASEAnrvGLfeDTNLcaI H3_ACRFO 88 AvlalQeASEAylvGLfeDTNLcaI H3_CAEEL 88 AvmalQeAAEAylvGLfeDTNLcaI H3_DROME 88 AvmalQeASEAylvALfeDTNLcaI H3_ENCAL 88 AvaalQeAAEAylvGLfeDTNLcaI H3_ENTHI 87 AisalQeAAEAylvGLfeDTNLcaI H3_HORVU 33 AvlalQeAAEAylvGLfeDTNLcaI H3_LEIIN 82 AimalQeATEAyivSLmaDTNLacI H3_MAIZE 88 AvaalQeAAEAylvGLfeDTNLcaI H3_PEA 88 AvsalQeAAEAylvGLfeDTNLcaI H3_PSAMI 88 AvmalQeASEAylvGLfeDTNLcaI H3_VOLCA 87 AvlalQeAAEAylvGLfeDTNLcaI ----------------------------------------- ID HISTONE_H3_1.pratt2 PA Q-x-A-[AST]-[EK]-A-x(3)-[AGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP] NR MATCHES 40 POS 11 1 1 2345 67 8901 2 H31_HUMAN 19 QlATKAarkSApaTGGVkkP H31_SCHPO 19 QlASKAarkAApaTGGVkkP H31_TETPY 19 QlASKAarkSApaTGGIkkP H31_TETPY 93 QeAAEAylvGLfeDTNLcaI H32_BOVIN 19 QlATKAarkSApaTGGVkkP H32_BOVIN 93 QeASEAylvGLfeDTNLcaI H32_MEDSA 19 QlATKAarkSAptTGGVkkP H32_MEDSA 93 QeAAEAylvGLfeDTNLcaI H32_ORYSA 19 QlATKAarkSApaTGGVkkP H32_TETAM 19 QlASKAarkSApaTGGIkkP H32_TETBO 19 QlASKAarkSApaTGGIkkP H32_TETPY 93 QeAAEAylvGLfeDTNLcaI H32_XENLA 93 QeASEAylvALfeDTNLcaI H33_HUMAN 19 QlATKAarkSApsTGGVkkP H33_HUMAN 93 QeASEAylvGLfeDTNLcaI H33_SCHPO 19 QlASKAarkAApaTGGVkkP H33_TETTH 93 QeAAEAylvGLfeDTNLcaI H34_CAIMO 93 QeASEAylvGLfeDTNLcaI H34_MOUSE 92 QeASEAnrvGLfeDTNLcaI H3_ACRFO 19 QlATKAaakSApaTGGVkkP H3_ACRFO 93 QeASEAylvGLfeDTNLcaI H3_CAEEL 93 QeAAEAylvGLfeDTNLcaI H3_DROME 19 QlATKAarkSApaTGGVkkP H3_DROME 93 QeASEAylvALfeDTNLcaI H3_EMENI 19 QlASKAarkAApsTGGVkkP H3_ENCAL 19 QlATKAarkSApaTGGVkkP H3_ENCAL 93 QeAAEAylvGLfeDTNLcaI H3_ENTHI 92 QeAAEAylvGLfeDTNLcaI H3_HORVU 38 QeAAEAylvGLfeDTNLcaI H3_LEIIN 87 QeATEAyivSLmaDTNLacI H3_MAIZE 19 QlATKAarkSApaTGGVkkP H3_MAIZE 93 QeAAEAylvGLfeDTNLcaI H3_NEUCR 19 QlASKAarkSApsTGGVkkP H3_PEA 19 QlATKAarkSApaTGGVkkP H3_PEA 93 QeAAEAylvGLfeDTNLcaI H3_PSAMI 19 QlATKAarkSApaTGGVkkP H3_PSAMI 93 QeASEAylvGLfeDTNLcaI H3_STRPU 19 QlATKAarkSApaTGGVkkP H3_VOLCA 92 QeAAEAylvGLfeDTNLcaI H3_YEAST 19 QlASKAarkSApsTGGVkkP Fitness without relation: 26.0416 Relation between 7 and 12 giving score 26.2915 Statistics: 26.0416 26.2915 Q-x-A-[AST]-[EK]-A-x(3)-[AGS]-[AL]-x(2)-[DT]-[GT]-[GN]-[ILV]-x(2)-[IP],(7,12) A -> (P), L -> (I), : 26.291482 NR MATCHES 40 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,P)(A,P) POS 11 1 1 2345 67 8901 2 H31_HUMAN 19 QlATKAarkSApaTGGVkkP H31_SCHPO 19 QlASKAarkAApaTGGVkkP H31_TETPY 19 QlASKAarkSApaTGGIkkP H32_BOVIN 19 QlATKAarkSApaTGGVkkP H32_MEDSA 19 QlATKAarkSAptTGGVkkP H32_ORYSA 19 QlATKAarkSApaTGGVkkP H32_TETAM 19 QlASKAarkSApaTGGIkkP H32_TETBO 19 QlASKAarkSApaTGGIkkP H33_HUMAN 19 QlATKAarkSApsTGGVkkP H33_SCHPO 19 QlASKAarkAApaTGGVkkP H3_ACRFO 19 QlATKAaakSApaTGGVkkP H3_DROME 19 QlATKAarkSApaTGGVkkP H3_EMENI 19 QlASKAarkAApsTGGVkkP H3_ENCAL 19 QlATKAarkSApaTGGVkkP H3_MAIZE 19 QlATKAarkSApaTGGVkkP H3_NEUCR 19 QlASKAarkSApsTGGVkkP H3_PEA 19 QlATKAarkSApaTGGVkkP H3_PSAMI 19 QlATKAarkSApaTGGVkkP H3_STRPU 19 QlATKAarkSApaTGGVkkP H3_YEAST 19 QlASKAarkSApsTGGVkkP (L,I)(L,I) POS 11 1 1 2345 67 8901 2 H31_TETPY 93 QeAAEAylvGLfeDTNLcaI H32_BOVIN 93 QeASEAylvGLfeDTNLcaI H32_MEDSA 93 QeAAEAylvGLfeDTNLcaI H32_TETPY 93 QeAAEAylvGLfeDTNLcaI H32_XENLA 93 QeASEAylvALfeDTNLcaI H33_HUMAN 93 QeASEAylvGLfeDTNLcaI H33_TETTH 93 QeAAEAylvGLfeDTNLcaI H34_CAIMO 93 QeASEAylvGLfeDTNLcaI H34_MOUSE 92 QeASEAnrvGLfeDTNLcaI H3_ACRFO 93 QeASEAylvGLfeDTNLcaI H3_CAEEL 93 QeAAEAylvGLfeDTNLcaI H3_DROME 93 QeASEAylvALfeDTNLcaI H3_ENCAL 93 QeAAEAylvGLfeDTNLcaI H3_ENTHI 92 QeAAEAylvGLfeDTNLcaI H3_HORVU 38 QeAAEAylvGLfeDTNLcaI H3_LEIIN 87 QeATEAyivSLmaDTNLacI H3_MAIZE 93 QeAAEAylvGLfeDTNLcaI H3_PEA 93 QeAAEAylvGLfeDTNLcaI H3_PSAMI 93 QeASEAylvGLfeDTNLcaI H3_VOLCA 92 QeAAEAylvGLfeDTNLcaI ----------------------------------------- ID HISTONE_H3_1.pratt2 PA R-x(1,2)-Q-x(1,2)-A-x(2)-A-[AL]-[QR]-[EK]-[AS]-[ACSTV]-x-[AS]-x(2)-[GV]-x(4)-[DH] NR MATCHES 45 POS 1 1 1 1 2 3 456789 0 1 2 H31_HUMAN 17 Rk-Ql-AtkAARKSApAtgGvkkpH H31_HUMAN 83 Rf-QssAvmALQEACeAylVglfeD H31_SCHPO 17 Rk-Ql-AskAARKAApAtgGvkkpH H31_SCHPO 83 Rf-QssAigALQEAVeAylVslfeD H31_TETPY 17 Rk-Ql-AskAARKSApAtgGikkpH H31_TETPY 83 Rf-QssAvlALQEAAeAylVglfeD H32_BOVIN 17 Rk-Ql-AtkAARKSApAtgGvkkpH H32_BOVIN 83 Rf-QssAvmALQEASeAylVglfeD H32_MEDSA 83 Rf-QshAvlALQEAAeAylVglfeD H32_ORYSA 17 Rk-Ql-AtkAARKSApAtgGvkkpH H32_TETAM 17 Rk-Ql-AskAARKSApAtgGikkpH H32_TETBO 17 Rk-Ql-AskAARKSApAtgGikkpH H32_TETPY 83 Rf-QsqAilALQEAAeAylVglfeD H32_XENLA 83 Rf-QrsAvmALQEASeAylValfeD H33_HUMAN 17 Rk-Ql-AtkAARKSApStgGvkkpH H33_HUMAN 83 Rf-QsaAigALQEASeAylVglfeD H33_SCHPO 17 Rk-Ql-AskAARKAApAtgGvkkpH H33_SCHPO 83 Rf-QssAigALQEAVeAylVslfeD H33_TETTH 83 Rf-QsqAilALQEAAeAylVglfeD H34_CAIMO 83 Rf-QssAvmALQEASeAylVglfeD H34_MOUSE 82 Rf-QsaAigALQEASeAnrVglfeD H3_ACRFO 83 Rf-QssAvlALQEASeAylVglfeD H3_CAEEL 17 Rk-Ql-AtkAARKSApAsgGvkkpH H3_CAEEL 83 Rf-QssAvmALQEAAeAylVglfeD H3_DROME 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_DROME 83 Rf-QssAvmALQEASeAylValfeD H3_EMENI 17 Rk-Ql-AskAARKAApStgGvkkpH H3_EMENI 83 Rf-QssAigALQESVeAylVslfeD H3_ENCAL 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_ENCAL 83 Rf-QssAvaALQEAAeAylVglfeD H3_ENTHI 82 Rf-QsaAisALQEAAeAylVglfeD H3_HORVU 28 Rf-QshAvlALQEAAeAylVglfeD H3_LEIIN 77 Rf-QssAimALQEATeAyiVslmaD H3_MAIZE 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_MAIZE 83 Rf-QssAvaALQEAAeAylVglfeD H3_NEUCR 17 Rk-Ql-AskAARKSApStgGvkkpH H3_PEA 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_PEA 83 Rf-QssAvsALQEAAeAylVglfeD H3_PSAMI 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_PSAMI 83 Rf-QssAvmALQEASeAylVglfeD H3_STRPU 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_STRPU 83 Rf-QssAvmALQEASeAylVrlfeD H3_VOLCA 82 Rf-QsqAvlALQEAAeAylVglfeD H3_YEAST 17 Rk-Ql-AskAARKSApStgGvkkpH H3_YEAST 83 Rf-QssAigALQESVeAylVslfeD Fitness without relation: 27.5871 Relation between 5 and 12 giving score 27.9204 Statistics: 27.5871 27.9204 R-x(1,2)-Q-x(1,2)-A-x(2)-A-[AL]-[QR]-[EK]-[AS]-[ACSTV]-x-[AS]-x(2)-[GV]-x(4)-[DH],(5,12) A -> (H), L -> (D), : 27.920381 NR MATCHES 45 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,H)(A,H) POS 1 1 1 1 2 3 456789 0 1 2 H31_HUMAN 17 Rk-Ql-AtkAARKSApAtgGvkkpH H31_SCHPO 17 Rk-Ql-AskAARKAApAtgGvkkpH H31_TETPY 17 Rk-Ql-AskAARKSApAtgGikkpH H32_BOVIN 17 Rk-Ql-AtkAARKSApAtgGvkkpH H32_ORYSA 17 Rk-Ql-AtkAARKSApAtgGvkkpH H32_TETAM 17 Rk-Ql-AskAARKSApAtgGikkpH H32_TETBO 17 Rk-Ql-AskAARKSApAtgGikkpH H33_HUMAN 17 Rk-Ql-AtkAARKSApStgGvkkpH H33_SCHPO 17 Rk-Ql-AskAARKAApAtgGvkkpH H3_CAEEL 17 Rk-Ql-AtkAARKSApAsgGvkkpH H3_DROME 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_EMENI 17 Rk-Ql-AskAARKAApStgGvkkpH H3_ENCAL 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_MAIZE 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_NEUCR 17 Rk-Ql-AskAARKSApStgGvkkpH H3_PEA 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_PSAMI 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_STRPU 17 Rk-Ql-AtkAARKSApAtgGvkkpH H3_YEAST 17 Rk-Ql-AskAARKSApStgGvkkpH (L,D)(L,D) POS 1 1 1 1 2 3 456789 0 1 2 H31_HUMAN 83 Rf-QssAvmALQEACeAylVglfeD H31_SCHPO 83 Rf-QssAigALQEAVeAylVslfeD H31_TETPY 83 Rf-QssAvlALQEAAeAylVglfeD H32_BOVIN 83 Rf-QssAvmALQEASeAylVglfeD H32_MEDSA 83 Rf-QshAvlALQEAAeAylVglfeD H32_TETPY 83 Rf-QsqAilALQEAAeAylVglfeD H32_XENLA 83 Rf-QrsAvmALQEASeAylValfeD H33_HUMAN 83 Rf-QsaAigALQEASeAylVglfeD H33_SCHPO 83 Rf-QssAigALQEAVeAylVslfeD H33_TETTH 83 Rf-QsqAilALQEAAeAylVglfeD H34_CAIMO 83 Rf-QssAvmALQEASeAylVglfeD H34_MOUSE 82 Rf-QsaAigALQEASeAnrVglfeD H3_ACRFO 83 Rf-QssAvlALQEASeAylVglfeD H3_CAEEL 83 Rf-QssAvmALQEAAeAylVglfeD H3_DROME 83 Rf-QssAvmALQEASeAylValfeD H3_EMENI 83 Rf-QssAigALQESVeAylVslfeD H3_ENCAL 83 Rf-QssAvaALQEAAeAylVglfeD H3_ENTHI 82 Rf-QsaAisALQEAAeAylVglfeD H3_HORVU 28 Rf-QshAvlALQEAAeAylVglfeD H3_LEIIN 77 Rf-QssAimALQEATeAyiVslmaD H3_MAIZE 83 Rf-QssAvaALQEAAeAylVglfeD H3_PEA 83 Rf-QssAvsALQEAAeAylVglfeD H3_PSAMI 83 Rf-QssAvmALQEASeAylVglfeD H3_STRPU 83 Rf-QssAvmALQEASeAylVrlfeD H3_VOLCA 82 Rf-QsqAvlALQEAAeAylVglfeD H3_YEAST 83 Rf-QssAigALQESVeAylVslfeD ----------------------------------------- ID HISTONE_H3_1.pratt2 PA R-[FK]-Q-x(1,2)-A-x(2)-A-x(3,4)-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR] NR MATCHES 41 POS 1 1 123 4 5 67 8 90 1 H31_HUMAN 17 RKQl-AtkAarksAPaTgGVkkphR H31_SCHPO 17 RKQl-AskAarkaAPaTgGVkkphR H31_TETPY 17 RKQl-AskAarksAPaTgGIkkphR H31_TETPY 83 RFQssAvlAlqe-AAeAyLVglfeD H32_BOVIN 17 RKQl-AtkAarksAPaTgGVkkphR H32_BOVIN 83 RFQssAvmAlqe-ASeAyLVglfeD H32_MEDSA 17 RKQl-AtkAarksAPtTgGVkkphR H32_MEDSA 83 RFQshAvlAlqe-AAeAyLVglfeD H32_ORYSA 17 RKQl-AtkAarksAPaTgGVkkphR H32_TETAM 17 RKQl-AskAarksAPaTgGIkkphR H32_TETBO 17 RKQl-AskAarksAPaTgGIkkphR H32_TETPY 83 RFQsqAilAlqe-AAeAyLVglfeD H32_XENLA 83 RFQrsAvmAlqe-ASeAyLValfeD H33_HUMAN 17 RKQl-AtkAarksAPsTgGVkkphR H33_HUMAN 83 RFQsaAigAlqe-ASeAyLVglfeD H33_SCHPO 17 RKQl-AskAarkaAPaTgGVkkphR H33_TETTH 83 RFQsqAilAlqe-AAeAyLVglfeD H34_CAIMO 83 RFQssAvmAlqe-ASeAyLVglfeD H34_MOUSE 17 RKQl-AtkAaxksAPsTgGVkkshR H3_ACRFO 17 RKQl-AtkAaaksAPaTgGVkkphR H3_ACRFO 83 RFQssAvlAlqe-ASeAyLVglfeD H3_CAEEL 83 RFQssAvmAlqe-AAeAyLVglfeD H3_DROME 17 RKQl-AtkAarksAPaTgGVkkphR H3_DROME 83 RFQssAvmAlqe-ASeAyLValfeD H3_EMENI 17 RKQl-AskAarkaAPsTgGVkkphR H3_ENCAL 17 RKQl-AtkAarksAPaTgGVkkphR H3_ENCAL 83 RFQssAvaAlqe-AAeAyLVglfeD H3_ENTHI 82 RFQsaAisAlqe-AAeAyLVglfeD H3_HORVU 28 RFQshAvlAlqe-AAeAyLVglfeD H3_LEIIN 77 RFQssAimAlqe-ATeAyIVslmaD H3_MAIZE 17 RKQl-AtkAarksAPaTgGVkkphR H3_MAIZE 83 RFQssAvaAlqe-AAeAyLVglfeD H3_NEUCR 17 RKQl-AskAarksAPsTgGVkkphR H3_PEA 17 RKQl-AtkAarksAPaTgGVkkphR H3_PEA 83 RFQssAvsAlqe-AAeAyLVglfeD H3_PSAMI 17 RKQl-AtkAarksAPaTgGVkkphR H3_PSAMI 83 RFQssAvmAlqe-ASeAyLVglfeD H3_STRPU 17 RKQl-AtkAarksAPaTgGVkkphR H3_STRPU 83 RFQssAvmAlqe-ASeAyLVrlfeD H3_VOLCA 82 RFQsqAvlAlqe-AAeAyLVglfeD H3_YEAST 17 RKQl-AskAarksAPsTgGVkkphR Fitness without relation: 25.2114 Relation between 8 and 11 giving score 25.4764 Statistics: 25.2114 25.4764 R-[FK]-Q-x(1,2)-A-x(2)-A-x(3,4)-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR],(8,11) A -> (D), T -> (R), : 25.476368 NR MATCHES 41 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,D)(A,D) POS 1 1 123 4 5 67 8 90 1 H31_TETPY 83 RFQssAvlAlqe-AAeAyLVglfeD H32_BOVIN 83 RFQssAvmAlqe-ASeAyLVglfeD H32_MEDSA 83 RFQshAvlAlqe-AAeAyLVglfeD H32_TETPY 83 RFQsqAilAlqe-AAeAyLVglfeD H32_XENLA 83 RFQrsAvmAlqe-ASeAyLValfeD H33_HUMAN 83 RFQsaAigAlqe-ASeAyLVglfeD H33_TETTH 83 RFQsqAilAlqe-AAeAyLVglfeD H34_CAIMO 83 RFQssAvmAlqe-ASeAyLVglfeD H3_ACRFO 83 RFQssAvlAlqe-ASeAyLVglfeD H3_CAEEL 83 RFQssAvmAlqe-AAeAyLVglfeD H3_DROME 83 RFQssAvmAlqe-ASeAyLValfeD H3_ENCAL 83 RFQssAvaAlqe-AAeAyLVglfeD H3_ENTHI 82 RFQsaAisAlqe-AAeAyLVglfeD H3_HORVU 28 RFQshAvlAlqe-AAeAyLVglfeD H3_LEIIN 77 RFQssAimAlqe-ATeAyIVslmaD H3_MAIZE 83 RFQssAvaAlqe-AAeAyLVglfeD H3_PEA 83 RFQssAvsAlqe-AAeAyLVglfeD H3_PSAMI 83 RFQssAvmAlqe-ASeAyLVglfeD H3_STRPU 83 RFQssAvmAlqe-ASeAyLVrlfeD H3_VOLCA 82 RFQsqAvlAlqe-AAeAyLVglfeD (T,R)(T,R) POS 1 1 123 4 5 67 8 90 1 H31_HUMAN 17 RKQl-AtkAarksAPaTgGVkkphR H31_SCHPO 17 RKQl-AskAarkaAPaTgGVkkphR H31_TETPY 17 RKQl-AskAarksAPaTgGIkkphR H32_BOVIN 17 RKQl-AtkAarksAPaTgGVkkphR H32_MEDSA 17 RKQl-AtkAarksAPtTgGVkkphR H32_ORYSA 17 RKQl-AtkAarksAPaTgGVkkphR H32_TETAM 17 RKQl-AskAarksAPaTgGIkkphR H32_TETBO 17 RKQl-AskAarksAPaTgGIkkphR H33_HUMAN 17 RKQl-AtkAarksAPsTgGVkkphR H33_SCHPO 17 RKQl-AskAarkaAPaTgGVkkphR H34_MOUSE 17 RKQl-AtkAaxksAPsTgGVkkshR H3_ACRFO 17 RKQl-AtkAaaksAPaTgGVkkphR H3_DROME 17 RKQl-AtkAarksAPaTgGVkkphR H3_EMENI 17 RKQl-AskAarkaAPsTgGVkkphR H3_ENCAL 17 RKQl-AtkAarksAPaTgGVkkphR H3_MAIZE 17 RKQl-AtkAarksAPaTgGVkkphR H3_NEUCR 17 RKQl-AskAarksAPsTgGVkkphR H3_PEA 17 RKQl-AtkAarksAPaTgGVkkphR H3_PSAMI 17 RKQl-AtkAarksAPaTgGVkkphR H3_STRPU 17 RKQl-AtkAarksAPaTgGVkkphR H3_YEAST 17 RKQl-AskAarksAPsTgGVkkphR ----------------------------------------- ID HISTONE_H3_1.pratt2 PA L-x(0,1)-A-x(2,3)-A-x-[KR]-x-[AT]-[IP]-x(3)-[DG]-[IMV]-[KQ]-x-[APS] NR MATCHES 49 POS 1 1 2 3 4 56 789 0 H31_HUMAN 20 L-AtkaArKsAPatgGVKkP H31_HUMAN 109 LcAih-AkRvTImpkDIQlA H31_SCHPO 20 L-AskaArKaAPatgGVKkP H31_TETPY 20 L-AskaArKsAPatgGIKkP H31_TETPY 109 LcAih-ArRvTImtkDMQlA H32_BOVIN 20 L-AtkaArKsAPatgGVKkP H32_BOVIN 109 LcAih-AkRvTImpkDIQlA H32_MEDSA 20 L-AtkaArKsAPttgGVKkP H32_MEDSA 109 LcAih-AkRvTImpkDIQlA H32_ORYSA 20 L-AtkaArKsAPatgGVKkP H32_ORYSA 109 LcAih-AkRvTImpkDIQlA H32_TETAM 20 L-AskaArKsAPatgGIKkP H32_TETBO 20 L-AskaArKsAPatgGIKkP H32_TETPY 20 L-AtkaArKsAPvsgGVKkP H32_TETPY 109 LcAih-ArRvTImtkDMQlA H32_XENLA 109 LcAih-AkRvTImpkDIQlA H33_HUMAN 20 L-AtkaArKsAPstgGVKkP H33_HUMAN 109 LcAih-AkRvTImpkDIQlA H33_SCHPO 20 L-AskaArKaAPatgGVKkP H33_TETTH 20 L-AtkaArKsAPvsgGVKkP H34_CAIMO 20 L-AtkaAhKsAPamgGVKkP H34_MOUSE 20 L-AtkaAxKsAPstgGVKkS H3_ACRFO 20 L-AtkaAaKsAPatgGVKkP H3_ACRFO 109 LcAih-AkRvTImpkDIQlA H3_CAEEL 20 L-AtkaArKsAPasgGVKkP H3_CAEEL 109 LcAih-AkRvTImpkDIQlA H3_DROME 20 L-AtkaArKsAPatgGVKkP H3_DROME 109 LcAih-AkRiTImpkDIQlA H3_EMENI 20 L-AskaArKaAPstgGVKkP H3_EMENI 109 LcAih-AkRvTIqskDIQlA H3_ENCAL 20 L-AtkaArKsAPatgGVKkP H3_ENCAL 109 LcAih-AkRvTImpkDIQlA H3_ENTHI 108 LcAih-AkRiTImpkDMQlA H3_HORVU 54 LcAih-AkRvTImpkDIQlA H3_LEIIN 103 L-AcihAkRvTIqpkDIQlA H3_MAIZE 20 L-AtkaArKsAPatgGVKkP H3_MAIZE 109 LcAih-AkRvTImpkDIQlA H3_NEUCR 20 L-AskaArKsAPstgGVKkP H3_NEUCR 109 LcAih-AkRvTIqskDIQlA H3_PEA 20 L-AtkaArKsAPatgGVKkP H3_PEA 109 LcAih-AkRvTImpkDIQlA H3_PSAMI 20 L-AtkaArKsAPatgGVKkP H3_PSAMI 109 LcAih-AkRvTImpkDIQlA H3_STRPU 20 L-AtkaArKsAPatgGVKkP H3_STRPU 109 LcAih-AkRvTImpkDIQlA H3_VOLCA 20 L-Atk-AaRkTPatgGVKkP H3_VOLCA 108 LcAih-AkRvTImpkDIQlA H3_YEAST 20 L-AskaArKsAPstgGVKkP H3_YEAST 109 LaAih-AkRvTIqkkDIKlA Fitness without relation: 21.4503 Relation between 6 and 7 giving score 21.8201 Statistics: 21.4503 21.8201 L-x(0,1)-A-x(2,3)-A-x-[KR]-x-[AT]-[IP]-x(3)-[DG]-[IMV]-[KQ]-x-[APS],(6,7) I -> (D), P -> (G), : 21.820051 NR MATCHES 49 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (I,D)(I,D) POS 1 1 2 3 4 56 789 0 H31_HUMAN 109 LcAih-AkRvTImpkDIQlA H31_TETPY 109 LcAih-ArRvTImtkDMQlA H32_BOVIN 109 LcAih-AkRvTImpkDIQlA H32_MEDSA 109 LcAih-AkRvTImpkDIQlA H32_ORYSA 109 LcAih-AkRvTImpkDIQlA H32_TETPY 109 LcAih-ArRvTImtkDMQlA H32_XENLA 109 LcAih-AkRvTImpkDIQlA H33_HUMAN 109 LcAih-AkRvTImpkDIQlA H3_ACRFO 109 LcAih-AkRvTImpkDIQlA H3_CAEEL 109 LcAih-AkRvTImpkDIQlA H3_DROME 109 LcAih-AkRiTImpkDIQlA H3_EMENI 109 LcAih-AkRvTIqskDIQlA H3_ENCAL 109 LcAih-AkRvTImpkDIQlA H3_ENTHI 108 LcAih-AkRiTImpkDMQlA H3_HORVU 54 LcAih-AkRvTImpkDIQlA H3_LEIIN 103 L-AcihAkRvTIqpkDIQlA H3_MAIZE 109 LcAih-AkRvTImpkDIQlA H3_NEUCR 109 LcAih-AkRvTIqskDIQlA H3_PEA 109 LcAih-AkRvTImpkDIQlA H3_PSAMI 109 LcAih-AkRvTImpkDIQlA H3_STRPU 109 LcAih-AkRvTImpkDIQlA H3_VOLCA 108 LcAih-AkRvTImpkDIQlA H3_YEAST 109 LaAih-AkRvTIqkkDIKlA (P,G)(P,G) POS 1 1 2 3 4 56 789 0 H31_HUMAN 20 L-AtkaArKsAPatgGVKkP H31_SCHPO 20 L-AskaArKaAPatgGVKkP H31_TETPY 20 L-AskaArKsAPatgGIKkP H32_BOVIN 20 L-AtkaArKsAPatgGVKkP H32_MEDSA 20 L-AtkaArKsAPttgGVKkP H32_ORYSA 20 L-AtkaArKsAPatgGVKkP H32_TETAM 20 L-AskaArKsAPatgGIKkP H32_TETBO 20 L-AskaArKsAPatgGIKkP H32_TETPY 20 L-AtkaArKsAPvsgGVKkP H33_HUMAN 20 L-AtkaArKsAPstgGVKkP H33_SCHPO 20 L-AskaArKaAPatgGVKkP H33_TETTH 20 L-AtkaArKsAPvsgGVKkP H34_CAIMO 20 L-AtkaAhKsAPamgGVKkP H34_MOUSE 20 L-AtkaAxKsAPstgGVKkS H3_ACRFO 20 L-AtkaAaKsAPatgGVKkP H3_CAEEL 20 L-AtkaArKsAPasgGVKkP H3_DROME 20 L-AtkaArKsAPatgGVKkP H3_EMENI 20 L-AskaArKaAPstgGVKkP H3_ENCAL 20 L-AtkaArKsAPatgGVKkP H3_MAIZE 20 L-AtkaArKsAPatgGVKkP H3_NEUCR 20 L-AskaArKsAPstgGVKkP H3_PEA 20 L-AtkaArKsAPatgGVKkP H3_PSAMI 20 L-AtkaArKsAPatgGVKkP H3_STRPU 20 L-AtkaArKsAPatgGVKkP H3_VOLCA 20 L-Atk-AaRkTPatgGVKkP H3_YEAST 20 L-AskaArKsAPstgGVKkP ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x-[KQ]-x-A-x(2,3)-A-x(2)-[TV]-[AGS]-[GL]-[FIMV]-x-[DK]-[PT] NR MATCHES 43 POS 1 1 2 3 4 5678 90 H31_HUMAN 21 AtKaArksApaTGGVkKP H31_HUMAN 91 AlQeAce-AylVGLFeDT H31_SCHPO 21 AsKaArkaApaTGGVkKP H31_SCHPO 91 AlQeAve-AylVSLFeDT H31_TETPY 21 AsKaArksApaTGGIkKP H31_TETPY 91 AlQeAae-AylVGLFeDT H32_BOVIN 21 AtKaArksApaTGGVkKP H32_BOVIN 91 AlQeAse-AylVGLFeDT H32_MEDSA 21 AtKaArksAptTGGVkKP H32_MEDSA 91 AlQeAae-AylVGLFeDT H32_ORYSA 21 AtKaArksApaTGGVkKP H32_TETAM 21 AsKaArksApaTGGIkKP H32_TETBO 21 AsKaArksApaTGGIkKP H32_TETPY 91 AlQeAae-AylVGLFeDT H32_XENLA 91 AlQeAse-AylVALFeDT H33_HUMAN 21 AtKaArksApsTGGVkKP H33_HUMAN 91 AlQeAse-AylVGLFeDT H33_SCHPO 21 AsKaArkaApaTGGVkKP H33_SCHPO 91 AlQeAve-AylVSLFeDT H33_TETTH 91 AlQeAae-AylVGLFeDT H34_CAIMO 91 AlQeAse-AylVGLFeDT H34_MOUSE 90 AlQeAse-AnrVGLFeDT H3_ACRFO 21 AtKaAaksApaTGGVkKP H3_ACRFO 91 AlQeAse-AylVGLFeDT H3_CAEEL 91 AlQeAae-AylVGLFeDT H3_DROME 21 AtKaArksApaTGGVkKP H3_DROME 91 AlQeAse-AylVALFeDT H3_EMENI 21 AsKaArkaApsTGGVkKP H3_ENCAL 21 AtKaArksApaTGGVkKP H3_ENCAL 91 AlQeAae-AylVGLFeDT H3_ENTHI 90 AlQeAae-AylVGLFeDT H3_HORVU 36 AlQeAae-AylVGLFeDT H3_LEIIN 85 AlQeAte-AyiVSLMaDT H3_MAIZE 21 AtKaArksApaTGGVkKP H3_MAIZE 91 AlQeAae-AylVGLFeDT H3_NEUCR 21 AsKaArksApsTGGVkKP H3_PEA 21 AtKaArksApaTGGVkKP H3_PEA 91 AlQeAae-AylVGLFeDT H3_PSAMI 21 AtKaArksApaTGGVkKP H3_PSAMI 91 AlQeAse-AylVGLFeDT H3_STRPU 21 AtKaArksApaTGGVkKP H3_VOLCA 90 AlQeAae-AylVGLFeDT H3_YEAST 21 AsKaArksApsTGGVkKP Fitness without relation: 20.5241 Relation between 7 and 10 giving score 20.8262 Statistics: 20.5241 20.8262 A-x-[KQ]-x-A-x(2,3)-A-x(2)-[TV]-[AGS]-[GL]-[FIMV]-x-[DK]-[PT],(7,10) G -> (P), L -> (T), : 20.826207 NR MATCHES 43 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,P)(G,P) POS 1 1 2 3 4 5678 90 H31_HUMAN 21 AtKaArksApaTGGVkKP H31_SCHPO 21 AsKaArkaApaTGGVkKP H31_TETPY 21 AsKaArksApaTGGIkKP H32_BOVIN 21 AtKaArksApaTGGVkKP H32_MEDSA 21 AtKaArksAptTGGVkKP H32_ORYSA 21 AtKaArksApaTGGVkKP H32_TETAM 21 AsKaArksApaTGGIkKP H32_TETBO 21 AsKaArksApaTGGIkKP H33_HUMAN 21 AtKaArksApsTGGVkKP H33_SCHPO 21 AsKaArkaApaTGGVkKP H3_ACRFO 21 AtKaAaksApaTGGVkKP H3_DROME 21 AtKaArksApaTGGVkKP H3_EMENI 21 AsKaArkaApsTGGVkKP H3_ENCAL 21 AtKaArksApaTGGVkKP H3_MAIZE 21 AtKaArksApaTGGVkKP H3_NEUCR 21 AsKaArksApsTGGVkKP H3_PEA 21 AtKaArksApaTGGVkKP H3_PSAMI 21 AtKaArksApaTGGVkKP H3_STRPU 21 AtKaArksApaTGGVkKP H3_YEAST 21 AsKaArksApsTGGVkKP (L,T)(L,T) POS 1 1 2 3 4 5678 90 H31_HUMAN 91 AlQeAce-AylVGLFeDT H31_SCHPO 91 AlQeAve-AylVSLFeDT H31_TETPY 91 AlQeAae-AylVGLFeDT H32_BOVIN 91 AlQeAse-AylVGLFeDT H32_MEDSA 91 AlQeAae-AylVGLFeDT H32_TETPY 91 AlQeAae-AylVGLFeDT H32_XENLA 91 AlQeAse-AylVALFeDT H33_HUMAN 91 AlQeAse-AylVGLFeDT H33_SCHPO 91 AlQeAve-AylVSLFeDT H33_TETTH 91 AlQeAae-AylVGLFeDT H34_CAIMO 91 AlQeAse-AylVGLFeDT H34_MOUSE 90 AlQeAse-AnrVGLFeDT H3_ACRFO 91 AlQeAse-AylVGLFeDT H3_CAEEL 91 AlQeAae-AylVGLFeDT H3_DROME 91 AlQeAse-AylVALFeDT H3_ENCAL 91 AlQeAae-AylVGLFeDT H3_ENTHI 90 AlQeAae-AylVGLFeDT H3_HORVU 36 AlQeAae-AylVGLFeDT H3_LEIIN 85 AlQeAte-AyiVSLMaDT H3_MAIZE 91 AlQeAae-AylVGLFeDT H3_PEA 91 AlQeAae-AylVGLFeDT H3_PSAMI 91 AlQeAse-AylVGLFeDT H3_VOLCA 90 AlQeAae-AylVGLFeDT ----------------------------------------- ID HISTONE_H3_1.pratt2 PA Q-x(2)-[AST]-x(2)-A-x-[KQ]-x-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR] NR MATCHES 42 POS 1 1 2 3 4 56 7 89 0 H31_HUMAN 19 QlaTkaArKsAPaTgGVkkphR H31_SCHPO 19 QlaSkaArKaAPaTgGVkkphR H31_TETPY 19 QlaSkaArKsAPaTgGIkkphR H31_TETPY 85 QssAvlAlQeAAeAyLVglfeD H32_BOVIN 19 QlaTkaArKsAPaTgGVkkphR H32_BOVIN 85 QssAvmAlQeASeAyLVglfeD H32_MEDSA 19 QlaTkaArKsAPtTgGVkkphR H32_MEDSA 85 QshAvlAlQeAAeAyLVglfeD H32_ORYSA 19 QlaTkaArKsAPaTgGVkkphR H32_TETAM 19 QlaSkaArKsAPaTgGIkkphR H32_TETBO 19 QlaSkaArKsAPaTgGIkkphR H32_TETPY 85 QsqAilAlQeAAeAyLVglfeD H32_XENLA 19 QlvTkaAkKcAPaTgGVkkphR H32_XENLA 85 QrsAvmAlQeASeAyLValfeD H33_HUMAN 19 QlaTkaArKsAPsTgGVkkphR H33_HUMAN 85 QsaAigAlQeASeAyLVglfeD H33_SCHPO 19 QlaSkaArKaAPaTgGVkkphR H33_TETTH 85 QsqAilAlQeAAeAyLVglfeD H34_CAIMO 85 QssAvmAlQeASeAyLVglfeD H34_MOUSE 19 QlaTkaAxKsAPsTgGVkkshR H3_ACRFO 19 QlaTkaAaKsAPaTgGVkkphR H3_ACRFO 85 QssAvlAlQeASeAyLVglfeD H3_CAEEL 85 QssAvmAlQeAAeAyLVglfeD H3_DROME 19 QlaTkaArKsAPaTgGVkkphR H3_DROME 85 QssAvmAlQeASeAyLValfeD H3_EMENI 19 QlaSkaArKaAPsTgGVkkphR H3_ENCAL 19 QlaTkaArKsAPaTgGVkkphR H3_ENCAL 85 QssAvaAlQeAAeAyLVglfeD H3_ENTHI 84 QsaAisAlQeAAeAyLVglfeD H3_HORVU 30 QshAvlAlQeAAeAyLVglfeD H3_LEIIN 79 QssAimAlQeATeAyIVslmaD H3_MAIZE 19 QlaTkaArKsAPaTgGVkkphR H3_MAIZE 85 QssAvaAlQeAAeAyLVglfeD H3_NEUCR 19 QlaSkaArKsAPsTgGVkkphR H3_PEA 19 QlaTkaArKsAPaTgGVkkphR H3_PEA 85 QssAvsAlQeAAeAyLVglfeD H3_PSAMI 19 QlaTkaArKsAPaTgGVkkphR H3_PSAMI 85 QssAvmAlQeASeAyLVglfeD H3_STRPU 19 QlaTkaArKsAPaTgGVkkphR H3_STRPU 85 QssAvmAlQeASeAyLVrlfeD H3_VOLCA 84 QsqAvlAlQeAAeAyLVglfeD H3_YEAST 19 QlaSkaArKsAPsTgGVkkphR Fitness without relation: 19.7314 Relation between 7 and 10 giving score 20.0137 Statistics: 19.7314 20.0137 Q-x(2)-[AST]-x(2)-A-x-[KQ]-x-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR],(7,10) A -> (D), T -> (R), : 20.013734 NR MATCHES 42 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,D)(A,D) POS 1 1 2 3 4 56 7 89 0 H31_TETPY 85 QssAvlAlQeAAeAyLVglfeD H32_BOVIN 85 QssAvmAlQeASeAyLVglfeD H32_MEDSA 85 QshAvlAlQeAAeAyLVglfeD H32_TETPY 85 QsqAilAlQeAAeAyLVglfeD H32_XENLA 85 QrsAvmAlQeASeAyLValfeD H33_HUMAN 85 QsaAigAlQeASeAyLVglfeD H33_TETTH 85 QsqAilAlQeAAeAyLVglfeD H34_CAIMO 85 QssAvmAlQeASeAyLVglfeD H3_ACRFO 85 QssAvlAlQeASeAyLVglfeD H3_CAEEL 85 QssAvmAlQeAAeAyLVglfeD H3_DROME 85 QssAvmAlQeASeAyLValfeD H3_ENCAL 85 QssAvaAlQeAAeAyLVglfeD H3_ENTHI 84 QsaAisAlQeAAeAyLVglfeD H3_HORVU 30 QshAvlAlQeAAeAyLVglfeD H3_LEIIN 79 QssAimAlQeATeAyIVslmaD H3_MAIZE 85 QssAvaAlQeAAeAyLVglfeD H3_PEA 85 QssAvsAlQeAAeAyLVglfeD H3_PSAMI 85 QssAvmAlQeASeAyLVglfeD H3_STRPU 85 QssAvmAlQeASeAyLVrlfeD H3_VOLCA 84 QsqAvlAlQeAAeAyLVglfeD (T,R)(T,R) POS 1 1 2 3 4 56 7 89 0 H31_HUMAN 19 QlaTkaArKsAPaTgGVkkphR H31_SCHPO 19 QlaSkaArKaAPaTgGVkkphR H31_TETPY 19 QlaSkaArKsAPaTgGIkkphR H32_BOVIN 19 QlaTkaArKsAPaTgGVkkphR H32_MEDSA 19 QlaTkaArKsAPtTgGVkkphR H32_ORYSA 19 QlaTkaArKsAPaTgGVkkphR H32_TETAM 19 QlaSkaArKsAPaTgGIkkphR H32_TETBO 19 QlaSkaArKsAPaTgGIkkphR H32_XENLA 19 QlvTkaAkKcAPaTgGVkkphR H33_HUMAN 19 QlaTkaArKsAPsTgGVkkphR H33_SCHPO 19 QlaSkaArKaAPaTgGVkkphR H34_MOUSE 19 QlaTkaAxKsAPsTgGVkkshR H3_ACRFO 19 QlaTkaAaKsAPaTgGVkkphR H3_DROME 19 QlaTkaArKsAPaTgGVkkphR H3_EMENI 19 QlaSkaArKaAPsTgGVkkphR H3_ENCAL 19 QlaTkaArKsAPaTgGVkkphR H3_MAIZE 19 QlaTkaArKsAPaTgGVkkphR H3_NEUCR 19 QlaSkaArKsAPsTgGVkkphR H3_PEA 19 QlaTkaArKsAPaTgGVkkphR H3_PSAMI 19 QlaTkaArKsAPaTgGVkkphR H3_STRPU 19 QlaTkaArKsAPaTgGVkkphR H3_YEAST 19 QlaSkaArKsAPsTgGVkkphR ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(0,1)-K-x(1,2)-T-[GIV]-x(3)-[DP]-x-[KQ]-x-[AL]-x(4)-[AG]-[EHR]-[KR] NR MATCHES 46 POS 1 1 2 34 5 6 7 890 H31_HUMAN 7 ArKs-TGgkaPrKqLatkaARK H31_HUMAN 114 A-KrvTImpkDiQlArrirGER H31_SCHPO 7 ArKs-TGgkaPrKqLaskaARK H31_TETPY 7 ArKs-TGakaPrKqLaskaARK H32_BOVIN 7 ArKs-TGgkaPrKqLatkaARK H32_BOVIN 114 A-KrvTImpkDiQlArrirGER H32_MEDSA 7 ArKs-TGgkaPrKqLatkaARK H32_MEDSA 114 A-KrvTImpkDiQlArrirGER H32_ORYSA 7 ArKs-TGgkaPrKqLatkaARK H32_ORYSA 114 A-KrvTImpkDiQlArrirGER H32_TETAM 7 ArKs-TGakaPrKqLaskaARK H32_TETBO 7 ArKs-TGaeaPrKqLaskaARK H32_TETPY 7 ArKs-TGvkaPrKqLatkaARK H32_XENLA 114 A-KrvTImpkDiQlArrirGER H33_HUMAN 7 ArKs-TGgkaPrKqLatkaARK H33_HUMAN 114 A-KrvTImpkDiQlArrirGER H33_SCHPO 7 ArKs-TGgkaPrKqLaskaARK H33_TETTH 7 ArKs-TGvkaPrKqLatkaARK H34_CAIMO 7 AcKs-TGrkaPrKqLatkaAHK H34_MOUSE 113 A-KcvTVipkDiQlAhsilGER H3_ACRFO 114 A-KrvTImpkDiQlArrirGER H3_CAEEL 7 ArKs-TGgkaPrKqLatkaARK H3_CAEEL 114 A-KrvTImpkDiQlArrirGER H3_DROME 7 ArKs-TGgkaPrKqLatkaARK H3_DROME 114 A-KriTImpkDiQlArrirGER H3_EMENI 7 ArKs-TGgkaPrKqLaskaARK H3_EMENI 114 A-KrvTIqskDiQlArrlrGER H3_ENCAL 7 ArKs-TGgkaPrKqLatkaARK H3_ENCAL 114 A-KrvTImpkDiQlArrirGER H3_ENTHI 113 A-KriTImpkDmQlArrirGER H3_HORVU 59 A-KrvTImpkDiQlArrirGER H3_LEIIN 108 A-KrvTIqpkDiQlAlrlrGER H3_MAIZE 7 ArKs-TGgkaPrKqLatkaARK H3_MAIZE 114 A-KrvTImpkDiQlArrirGER H3_NEUCR 7 ArKs-TGgkaPrKqLaskaARK H3_NEUCR 114 A-KrvTIqskDiQlArrlrGER H3_PEA 7 ArKs-TGgkaPrKqLatkaARK H3_PEA 114 A-KrvTImpkDiQlArrirGER H3_PSAMI 7 ArKs-TGgkaPrKqLatkaARK H3_PSAMI 114 A-KrvTImpkDiQlArrirGER H3_STRPU 7 ArKs-TGgkaPrKqLatkaARK H3_STRPU 114 A-KrvTImpkDiQlArrirGER H3_VOLCA 7 ArKs-TGgkaPrKqLatkaARK H3_VOLCA 113 A-KrvTImpkDiQlArrirGER H3_YEAST 7 ArKs-TGgkaPrKqLaskaARK H3_YEAST 114 A-KrvTIqkkDiKlArrlrGER Fitness without relation: 21.0218 Relation between 8 and 10 giving score 21.3696 Statistics: 21.0218 21.3696 A-x(0,1)-K-x(1,2)-T-[GIV]-x(3)-[DP]-x-[KQ]-x-[AL]-x(4)-[AG]-[EHR]-[KR],(8,10) A -> (K), G -> (R), : 21.369620 NR MATCHES 46 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,K)(A,K) POS 1 1 2 34 5 6 7 890 H31_HUMAN 7 ArKs-TGgkaPrKqLatkaARK H31_SCHPO 7 ArKs-TGgkaPrKqLaskaARK H31_TETPY 7 ArKs-TGakaPrKqLaskaARK H32_BOVIN 7 ArKs-TGgkaPrKqLatkaARK H32_MEDSA 7 ArKs-TGgkaPrKqLatkaARK H32_ORYSA 7 ArKs-TGgkaPrKqLatkaARK H32_TETAM 7 ArKs-TGakaPrKqLaskaARK H32_TETBO 7 ArKs-TGaeaPrKqLaskaARK H32_TETPY 7 ArKs-TGvkaPrKqLatkaARK H33_HUMAN 7 ArKs-TGgkaPrKqLatkaARK H33_SCHPO 7 ArKs-TGgkaPrKqLaskaARK H33_TETTH 7 ArKs-TGvkaPrKqLatkaARK H34_CAIMO 7 AcKs-TGrkaPrKqLatkaAHK H3_CAEEL 7 ArKs-TGgkaPrKqLatkaARK H3_DROME 7 ArKs-TGgkaPrKqLatkaARK H3_EMENI 7 ArKs-TGgkaPrKqLaskaARK H3_ENCAL 7 ArKs-TGgkaPrKqLatkaARK H3_MAIZE 7 ArKs-TGgkaPrKqLatkaARK H3_NEUCR 7 ArKs-TGgkaPrKqLaskaARK H3_PEA 7 ArKs-TGgkaPrKqLatkaARK H3_PSAMI 7 ArKs-TGgkaPrKqLatkaARK H3_STRPU 7 ArKs-TGgkaPrKqLatkaARK H3_VOLCA 7 ArKs-TGgkaPrKqLatkaARK H3_YEAST 7 ArKs-TGgkaPrKqLaskaARK (G,R)(G,R) POS 1 1 2 34 5 6 7 890 H31_HUMAN 114 A-KrvTImpkDiQlArrirGER H32_BOVIN 114 A-KrvTImpkDiQlArrirGER H32_MEDSA 114 A-KrvTImpkDiQlArrirGER H32_ORYSA 114 A-KrvTImpkDiQlArrirGER H32_XENLA 114 A-KrvTImpkDiQlArrirGER H33_HUMAN 114 A-KrvTImpkDiQlArrirGER H34_MOUSE 113 A-KcvTVipkDiQlAhsilGER H3_ACRFO 114 A-KrvTImpkDiQlArrirGER H3_CAEEL 114 A-KrvTImpkDiQlArrirGER H3_DROME 114 A-KriTImpkDiQlArrirGER H3_EMENI 114 A-KrvTIqskDiQlArrlrGER H3_ENCAL 114 A-KrvTImpkDiQlArrirGER H3_ENTHI 113 A-KriTImpkDmQlArrirGER H3_HORVU 59 A-KrvTImpkDiQlArrirGER H3_LEIIN 108 A-KrvTIqpkDiQlAlrlrGER H3_MAIZE 114 A-KrvTImpkDiQlArrirGER H3_NEUCR 114 A-KrvTIqskDiQlArrlrGER H3_PEA 114 A-KrvTImpkDiQlArrirGER H3_PSAMI 114 A-KrvTImpkDiQlArrirGER H3_STRPU 114 A-KrvTImpkDiQlArrirGER H3_VOLCA 113 A-KrvTImpkDiQlArrirGER H3_YEAST 114 A-KrvTIqkkDiKlArrlrGER ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x-[KQ]-x-A-x(1,3)-A-x(2)-[TV]-[AGS]-[GL]-[FIMV]-x-[DK]-[PT] NR MATCHES 43 POS 1 1 2 3 4 5678 90 H31_HUMAN 21 AtKaArksApaTGGVkKP H31_HUMAN 91 AlQeAce-AylVGLFeDT H31_SCHPO 21 AsKaArkaApaTGGVkKP H31_SCHPO 91 AlQeAve-AylVSLFeDT H31_TETPY 21 AsKaArksApaTGGIkKP H31_TETPY 91 AlQeAae-AylVGLFeDT H32_BOVIN 21 AtKaArksApaTGGVkKP H32_BOVIN 91 AlQeAse-AylVGLFeDT H32_MEDSA 21 AtKaArksAptTGGVkKP H32_MEDSA 91 AlQeAae-AylVGLFeDT H32_ORYSA 21 AtKaArksApaTGGVkKP H32_TETAM 21 AsKaArksApaTGGIkKP H32_TETBO 21 AsKaArksApaTGGIkKP H32_TETPY 91 AlQeAae-AylVGLFeDT H32_XENLA 91 AlQeAse-AylVALFeDT H33_HUMAN 21 AtKaArksApsTGGVkKP H33_HUMAN 91 AlQeAse-AylVGLFeDT H33_SCHPO 21 AsKaArkaApaTGGVkKP H33_SCHPO 91 AlQeAve-AylVSLFeDT H33_TETTH 91 AlQeAae-AylVGLFeDT H34_CAIMO 91 AlQeAse-AylVGLFeDT H34_MOUSE 90 AlQeAse-AnrVGLFeDT H3_ACRFO 21 AtKaAaksApaTGGVkKP H3_ACRFO 91 AlQeAse-AylVGLFeDT H3_CAEEL 91 AlQeAae-AylVGLFeDT H3_DROME 21 AtKaArksApaTGGVkKP H3_DROME 91 AlQeAse-AylVALFeDT H3_EMENI 21 AsKaArkaApsTGGVkKP H3_ENCAL 21 AtKaArksApaTGGVkKP H3_ENCAL 91 AlQeAae-AylVGLFeDT H3_ENTHI 90 AlQeAae-AylVGLFeDT H3_HORVU 36 AlQeAae-AylVGLFeDT H3_LEIIN 85 AlQeAte-AyiVSLMaDT H3_MAIZE 21 AtKaArksApaTGGVkKP H3_MAIZE 91 AlQeAae-AylVGLFeDT H3_NEUCR 21 AsKaArksApsTGGVkKP H3_PEA 21 AtKaArksApaTGGVkKP H3_PEA 91 AlQeAae-AylVGLFeDT H3_PSAMI 21 AtKaArksApaTGGVkKP H3_PSAMI 91 AlQeAse-AylVGLFeDT H3_STRPU 21 AtKaArksApaTGGVkKP H3_VOLCA 90 AlQeAae-AylVGLFeDT H3_YEAST 21 AsKaArksApsTGGVkKP Fitness without relation: 20.5241 Relation between 7 and 10 giving score 20.8262 Statistics: 20.5241 20.8262 A-x-[KQ]-x-A-x(1,3)-A-x(2)-[TV]-[AGS]-[GL]-[FIMV]-x-[DK]-[PT],(7,10) G -> (P), L -> (T), : 20.826207 NR MATCHES 43 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,P)(G,P) POS 1 1 2 3 4 5678 90 H31_HUMAN 21 AtKaArksApaTGGVkKP H31_SCHPO 21 AsKaArkaApaTGGVkKP H31_TETPY 21 AsKaArksApaTGGIkKP H32_BOVIN 21 AtKaArksApaTGGVkKP H32_MEDSA 21 AtKaArksAptTGGVkKP H32_ORYSA 21 AtKaArksApaTGGVkKP H32_TETAM 21 AsKaArksApaTGGIkKP H32_TETBO 21 AsKaArksApaTGGIkKP H33_HUMAN 21 AtKaArksApsTGGVkKP H33_SCHPO 21 AsKaArkaApaTGGVkKP H3_ACRFO 21 AtKaAaksApaTGGVkKP H3_DROME 21 AtKaArksApaTGGVkKP H3_EMENI 21 AsKaArkaApsTGGVkKP H3_ENCAL 21 AtKaArksApaTGGVkKP H3_MAIZE 21 AtKaArksApaTGGVkKP H3_NEUCR 21 AsKaArksApsTGGVkKP H3_PEA 21 AtKaArksApaTGGVkKP H3_PSAMI 21 AtKaArksApaTGGVkKP H3_STRPU 21 AtKaArksApaTGGVkKP H3_YEAST 21 AsKaArksApsTGGVkKP (L,T)(L,T) POS 1 1 2 3 4 5678 90 H31_HUMAN 91 AlQeAce-AylVGLFeDT H31_SCHPO 91 AlQeAve-AylVSLFeDT H31_TETPY 91 AlQeAae-AylVGLFeDT H32_BOVIN 91 AlQeAse-AylVGLFeDT H32_MEDSA 91 AlQeAae-AylVGLFeDT H32_TETPY 91 AlQeAae-AylVGLFeDT H32_XENLA 91 AlQeAse-AylVALFeDT H33_HUMAN 91 AlQeAse-AylVGLFeDT H33_SCHPO 91 AlQeAve-AylVSLFeDT H33_TETTH 91 AlQeAae-AylVGLFeDT H34_CAIMO 91 AlQeAse-AylVGLFeDT H34_MOUSE 90 AlQeAse-AnrVGLFeDT H3_ACRFO 91 AlQeAse-AylVGLFeDT H3_CAEEL 91 AlQeAae-AylVGLFeDT H3_DROME 91 AlQeAse-AylVALFeDT H3_ENCAL 91 AlQeAae-AylVGLFeDT H3_ENTHI 90 AlQeAae-AylVGLFeDT H3_HORVU 36 AlQeAae-AylVGLFeDT H3_LEIIN 85 AlQeAte-AyiVSLMaDT H3_MAIZE 91 AlQeAae-AylVGLFeDT H3_PEA 91 AlQeAae-AylVGLFeDT H3_PSAMI 91 AlQeAse-AylVGLFeDT H3_VOLCA 90 AlQeAae-AylVGLFeDT ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x-R-x-[QT]-[IL]-x-[PST]-K-[AD]-x(3)-[AS]-x(4)-G NR MATCHES 48 POS 1 2 34 567 8 9 H31_HUMAN 15 ApRkQLaTKAarkSapatG H31_HUMAN 114 AkRvTImPKDiqlArrirG H31_SCHPO 15 ApRkQLaSKAarkAapatG H31_TETPY 15 ApRkQLaSKAarkSapatG H31_TETPY 114 ArRvTImTKDmqlArrirG H32_BOVIN 15 ApRkQLaTKAarkSapatG H32_BOVIN 114 AkRvTImPKDiqlArrirG H32_MEDSA 15 ApRkQLaTKAarkSapttG H32_MEDSA 114 AkRvTImPKDiqlArrirG H32_ORYSA 15 ApRkQLaTKAarkSapatG H32_ORYSA 114 AkRvTImPKDiqlArrirG H32_TETAM 15 ApRkQLaSKAarkSapatG H32_TETBO 15 ApRkQLaSKAarkSapatG H32_TETPY 15 ApRkQLaTKAarkSapvsG H32_TETPY 114 ArRvTImTKDmqlArrirG H32_XENLA 114 AkRvTImPKDiqlArrirG H33_HUMAN 15 ApRkQLaTKAarkSapstG H33_HUMAN 114 AkRvTImPKDiqlArrirG H33_SCHPO 15 ApRkQLaSKAarkAapatG H33_TETTH 15 ApRkQLaTKAarkSapvsG H33_TETTH 114 ArRvTImTKDlhlArrirG H34_CAIMO 15 ApRkQLaTKAahkSapamG H34_MOUSE 15 ApRkQLaTKAaxkSapstG H3_ACRFO 15 ApRkQLaTKAaakSapatG H3_ACRFO 114 AkRvTImPKDiqlArrirG H3_CAEEL 15 ApRkQLaTKAarkSapasG H3_CAEEL 114 AkRvTImPKDiqlArrirG H3_DROME 15 ApRkQLaTKAarkSapatG H3_DROME 114 AkRiTImPKDiqlArrirG H3_EMENI 15 ApRkQLaSKAarkAapstG H3_EMENI 114 AkRvTIqSKDiqlArrlrG H3_ENCAL 15 ApRkQLaTKAarkSapatG H3_ENCAL 114 AkRvTImPKDiqlArrirG H3_ENTHI 113 AkRiTImPKDmqlArrirG H3_HORVU 59 AkRvTImPKDiqlArrirG H3_LEIIN 108 AkRvTIqPKDiqlAlrlrG H3_MAIZE 15 ApRkQLaTKAarkSapatG H3_MAIZE 114 AkRvTImPKDiqlArrirG H3_NEUCR 15 ApRkQLaSKAarkSapstG H3_NEUCR 114 AkRvTIqSKDiqlArrlrG H3_PEA 15 ApRkQLaTKAarkSapatG H3_PEA 114 AkRvTImPKDiqlArrirG H3_PSAMI 15 ApRkQLaTKAarkSapatG H3_PSAMI 114 AkRvTImPKDiqlArrirG H3_STRPU 15 ApRkQLaTKAarkSapatG H3_STRPU 114 AkRvTImPKDiqlArrirG H3_VOLCA 113 AkRvTImPKDiqlArrirG H3_YEAST 15 ApRkQLaSKAarkSapstG Fitness without relation: 19.7855 Relation between 3 and 7 giving score 20.1286 Statistics: 19.7855 20.1286 A-x-R-x-[QT]-[IL]-x-[PST]-K-[AD]-x(3)-[AS]-x(4)-G,(3,7) Q -> (A), T -> (D), : 20.128577 NR MATCHES 48 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (Q,A)(Q,A) POS 1 2 34 567 8 9 H31_HUMAN 15 ApRkQLaTKAarkSapatG H31_SCHPO 15 ApRkQLaSKAarkAapatG H31_TETPY 15 ApRkQLaSKAarkSapatG H32_BOVIN 15 ApRkQLaTKAarkSapatG H32_MEDSA 15 ApRkQLaTKAarkSapttG H32_ORYSA 15 ApRkQLaTKAarkSapatG H32_TETAM 15 ApRkQLaSKAarkSapatG H32_TETBO 15 ApRkQLaSKAarkSapatG H32_TETPY 15 ApRkQLaTKAarkSapvsG H33_HUMAN 15 ApRkQLaTKAarkSapstG H33_SCHPO 15 ApRkQLaSKAarkAapatG H33_TETTH 15 ApRkQLaTKAarkSapvsG H34_CAIMO 15 ApRkQLaTKAahkSapamG H34_MOUSE 15 ApRkQLaTKAaxkSapstG H3_ACRFO 15 ApRkQLaTKAaakSapatG H3_CAEEL 15 ApRkQLaTKAarkSapasG H3_DROME 15 ApRkQLaTKAarkSapatG H3_EMENI 15 ApRkQLaSKAarkAapstG H3_ENCAL 15 ApRkQLaTKAarkSapatG H3_MAIZE 15 ApRkQLaTKAarkSapatG H3_NEUCR 15 ApRkQLaSKAarkSapstG H3_PEA 15 ApRkQLaTKAarkSapatG H3_PSAMI 15 ApRkQLaTKAarkSapatG H3_STRPU 15 ApRkQLaTKAarkSapatG H3_YEAST 15 ApRkQLaSKAarkSapstG (T,D)(T,D) POS 1 2 34 567 8 9 H31_HUMAN 114 AkRvTImPKDiqlArrirG H31_TETPY 114 ArRvTImTKDmqlArrirG H32_BOVIN 114 AkRvTImPKDiqlArrirG H32_MEDSA 114 AkRvTImPKDiqlArrirG H32_ORYSA 114 AkRvTImPKDiqlArrirG H32_TETPY 114 ArRvTImTKDmqlArrirG H32_XENLA 114 AkRvTImPKDiqlArrirG H33_HUMAN 114 AkRvTImPKDiqlArrirG H33_TETTH 114 ArRvTImTKDlhlArrirG H3_ACRFO 114 AkRvTImPKDiqlArrirG H3_CAEEL 114 AkRvTImPKDiqlArrirG H3_DROME 114 AkRiTImPKDiqlArrirG H3_EMENI 114 AkRvTIqSKDiqlArrlrG H3_ENCAL 114 AkRvTImPKDiqlArrirG H3_ENTHI 113 AkRiTImPKDmqlArrirG H3_HORVU 59 AkRvTImPKDiqlArrirG H3_LEIIN 108 AkRvTIqPKDiqlAlrlrG H3_MAIZE 114 AkRvTImPKDiqlArrirG H3_NEUCR 114 AkRvTIqSKDiqlArrlrG H3_PEA 114 AkRvTImPKDiqlArrirG H3_PSAMI 114 AkRvTImPKDiqlArrirG H3_STRPU 114 AkRvTImPKDiqlArrirG H3_VOLCA 113 AkRvTImPKDiqlArrirG ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(2,3)-K-x-[DEST]-x-R-[FKR]-x(3)-[AG]-x(2)-[AP]-x-[KQR]-[EQ]-[AIL] NR MATCHES 49 POS 1 1 2 3 45 6 7 890 H31_HUMAN 1 Art-KqTaRKstgGkaPrKQL H31_HUMAN 75 AqdfKtDlRFqssAvmAlQEA H31_SCHPO 1 Art-KqTaRKstgGkaPrKQL H31_SCHPO 75 AqdfKtDlRFqssAigAlQEA H31_TETPY 1 Art-KqTaRKstgAkaPrKQL H31_TETPY 75 AhefKaElRFqssAvlAlQEA H32_BOVIN 1 Art-KqTaRKstgGkaPrKQL H32_BOVIN 75 AqdfKtDlRFqssAvmAlQEA H32_MEDSA 1 Art-KqTaRKstgGkaPrKQL H32_MEDSA 75 AqdfKtDlRFqshAvlAlQEA H32_ORYSA 1 Art-KqTaRKstgGkaPrKQL H32_ORYSA 75 AqdfKtDlRFqtsAvrAlQEA H32_TETAM 1 Art-KqTaRKstgAkaPrKQL H32_TETBO 1 Ara-KqTaRKstgAeaPrKQL H32_TETPY 75 AmemKnDiRFqsqAilAlQEA H32_XENLA 1 Art-KqTaRKstgGkaPrKQL H32_XENLA 75 AqdfKtDlRFqrsAvmAlQEA H33_HUMAN 1 Art-KqTaRKstgGkaPrKQL H33_HUMAN 75 AqdfKtDlRFqsaAigAlQEA H33_SCHPO 1 Art-KqTaRKstgGkaPrKQL H33_SCHPO 75 AqdfKtDlRFqssAigAlQEA H33_TETTH 75 AmemKsDiRFqsqAilAlQEA H34_CAIMO 75 AqdfKtDlRFqssAvmAlQEA H34_MOUSE 1 Aht-KqTaRKstcGkaPrKQL H34_MOUSE 74 AqdfKtDlRFqsaAigAlQEA H3_ACRFO 1 Art-KqTaRKstgGkaPrKQL H3_ACRFO 75 AqdfKtDlRFqssAvlAlQEA H3_CAEEL 1 Art-KqTaRKstgGkaPrKQL H3_CAEEL 75 AqdfKtDlRFqssAvmAlQEA H3_DROME 1 Art-KqTaRKstgGkaPrKQL H3_DROME 75 AqdfKtDlRFqssAvmAlQEA H3_EMENI 1 Art-KqTaRKstgGkaPrKQL H3_ENCAL 1 Art-KqTaRKstgGkaPrKQL H3_ENCAL 75 AqdfKtDlRFqssAvaAlQEA H3_ENTHI 74 AqvsKsDlRFqsaAisAlQEA H3_HORVU 20 AqdfKtDlRFqshAvlAlQEA H3_LEIIN 26 AsgvKrShRRwrpGtcAiREI H3_MAIZE 1 Art-KqTaRKstgGkaPrKQL H3_MAIZE 75 AqdfKtDlRFqssAvaAlQEA H3_NEUCR 1 Art-KqTaRKstgGkaPrKQL H3_PEA 1 Art-KqTaRKstgGkaPrKQL H3_PEA 75 AqdfKtDlRFqssAvsAlQEA H3_PSAMI 1 Art-KqTaRKstgGkaPrKQL H3_PSAMI 75 AqdfKtElRFqssAvmAlQEA H3_STRPU 1 Art-KqTaRKstgGkaPrKQL H3_STRPU 75 AqdfKtElRFqssAvmAlQEA H3_VOLCA 1 Art-KqTaRKstgGkaPrKQL H3_VOLCA 74 AqdfKtDlRFqsqAvlAlQEA H3_YEAST 1 Art-KqTaRKstgGkaPrKQL Fitness without relation: 19.6777 Relation between 5 and 10 giving score 20.2598 Statistics: 19.6777 20.2598 A-x(2,3)-K-x-[DEST]-x-R-[FKR]-x(3)-[AG]-x(2)-[AP]-x-[KQR]-[EQ]-[AIL],(5,10) F -> (A), K -> (L), R -> (I), : 20.259847 NR MATCHES 49 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (F,A)(F,A) POS 1 1 2 3 45 6 7 890 H31_HUMAN 75 AqdfKtDlRFqssAvmAlQEA H31_SCHPO 75 AqdfKtDlRFqssAigAlQEA H31_TETPY 75 AhefKaElRFqssAvlAlQEA H32_BOVIN 75 AqdfKtDlRFqssAvmAlQEA H32_MEDSA 75 AqdfKtDlRFqshAvlAlQEA H32_ORYSA 75 AqdfKtDlRFqtsAvrAlQEA H32_TETPY 75 AmemKnDiRFqsqAilAlQEA H32_XENLA 75 AqdfKtDlRFqrsAvmAlQEA H33_HUMAN 75 AqdfKtDlRFqsaAigAlQEA H33_SCHPO 75 AqdfKtDlRFqssAigAlQEA H33_TETTH 75 AmemKsDiRFqsqAilAlQEA H34_CAIMO 75 AqdfKtDlRFqssAvmAlQEA H34_MOUSE 74 AqdfKtDlRFqsaAigAlQEA H3_ACRFO 75 AqdfKtDlRFqssAvlAlQEA H3_CAEEL 75 AqdfKtDlRFqssAvmAlQEA H3_DROME 75 AqdfKtDlRFqssAvmAlQEA H3_ENCAL 75 AqdfKtDlRFqssAvaAlQEA H3_ENTHI 74 AqvsKsDlRFqsaAisAlQEA H3_HORVU 20 AqdfKtDlRFqshAvlAlQEA H3_MAIZE 75 AqdfKtDlRFqssAvaAlQEA H3_PEA 75 AqdfKtDlRFqssAvsAlQEA H3_PSAMI 75 AqdfKtElRFqssAvmAlQEA H3_STRPU 75 AqdfKtElRFqssAvmAlQEA H3_VOLCA 74 AqdfKtDlRFqsqAvlAlQEA (K,L)(K,L) POS 1 1 2 3 45 6 7 890 H31_HUMAN 1 Art-KqTaRKstgGkaPrKQL H31_SCHPO 1 Art-KqTaRKstgGkaPrKQL H31_TETPY 1 Art-KqTaRKstgAkaPrKQL H32_BOVIN 1 Art-KqTaRKstgGkaPrKQL H32_MEDSA 1 Art-KqTaRKstgGkaPrKQL H32_ORYSA 1 Art-KqTaRKstgGkaPrKQL H32_TETAM 1 Art-KqTaRKstgAkaPrKQL H32_TETBO 1 Ara-KqTaRKstgAeaPrKQL H32_XENLA 1 Art-KqTaRKstgGkaPrKQL H33_HUMAN 1 Art-KqTaRKstgGkaPrKQL H33_SCHPO 1 Art-KqTaRKstgGkaPrKQL H34_MOUSE 1 Aht-KqTaRKstcGkaPrKQL H3_ACRFO 1 Art-KqTaRKstgGkaPrKQL H3_CAEEL 1 Art-KqTaRKstgGkaPrKQL H3_DROME 1 Art-KqTaRKstgGkaPrKQL H3_EMENI 1 Art-KqTaRKstgGkaPrKQL H3_ENCAL 1 Art-KqTaRKstgGkaPrKQL H3_MAIZE 1 Art-KqTaRKstgGkaPrKQL H3_NEUCR 1 Art-KqTaRKstgGkaPrKQL H3_PEA 1 Art-KqTaRKstgGkaPrKQL H3_PSAMI 1 Art-KqTaRKstgGkaPrKQL H3_STRPU 1 Art-KqTaRKstgGkaPrKQL H3_VOLCA 1 Art-KqTaRKstgGkaPrKQL H3_YEAST 1 Art-KqTaRKstgGkaPrKQL (R,I)(R,I) POS 1 1 2 3 45 6 7 890 H3_LEIIN 26 AsgvKrShRRwrpGtcAiREI ----------------------------------------- ID HISTONE_H3_1.pratt2 PA K-[ENQST]-x-[AL]-R-x(1,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q NR MATCHES 47 POS 12 34 5 67 8 9 H31_HUMAN 4 KQtARk-StGGkAprkQ H31_HUMAN 79 KTdLRfqSsAVmAl--Q H31_SCHPO 4 KQtARk-StGGkAprkQ H31_SCHPO 79 KTdLRfqSsAIgAl--Q H31_TETPY 4 KQtARk-StGAkAprkQ H32_BOVIN 4 KQtARk-StGGkAprkQ H32_BOVIN 79 KTdLRfqSsAVmAl--Q H32_MEDSA 4 KQtARk-StGGkAprkQ H32_MEDSA 79 KTdLRfqShAVlAl--Q H32_ORYSA 4 KQtARk-StGGkAprkQ H32_TETAM 4 KQtARk-StGAkAprkQ H32_TETBO 4 KQtARk-StGAeAprkQ H32_TETPY 4 KQtARk-StGVkAprkQ H32_XENLA 4 KQtARk-StGGkAprkQ H33_HUMAN 4 KQtARk-StGGkAprkQ H33_HUMAN 79 KTdLRfqSaAIgAl--Q H33_SCHPO 4 KQtARk-StGGkAprkQ H33_SCHPO 79 KTdLRfqSsAIgAl--Q H33_TETTH 4 KQtARk-StGVkAprkQ H34_CAIMO 79 KTdLRfqSsAVmAl--Q H34_MOUSE 78 KTdLRfqSaAIgAl--Q H3_ACRFO 4 KQtARk-StGGkAprkQ H3_ACRFO 79 KTdLRfqSsAVlAl--Q H3_CAEEL 4 KQtARk-StGGkAprkQ H3_CAEEL 79 KTdLRfqSsAVmAl--Q H3_DROME 4 KQtARk-StGGkAprkQ H3_DROME 79 KTdLRfqSsAVmAl--Q H3_EMENI 4 KQtARk-StGGkAprkQ H3_EMENI 79 KSdLRfqSsAIgAl--Q H3_ENCAL 4 KQtARk-StGGkAprkQ H3_ENCAL 79 KTdLRfqSsAVaAl--Q H3_ENTHI 78 KSdLRfqSaAIsAl--Q H3_HORVU 24 KTdLRfqShAVlAl--Q H3_LEIIN 73 KEgLRfqSsAImAl--Q H3_MAIZE 4 KQtARk-StGGkAprkQ H3_MAIZE 79 KTdLRfqSsAVaAl--Q H3_NEUCR 4 KQtARk-StGGkAprkQ H3_PEA 4 KQtARk-StGGkAprkQ H3_PEA 79 KTdLRfqSsAVsAl--Q H3_PSAMI 4 KQtARk-StGGkAprkQ H3_PSAMI 79 KTeLRfqSsAVmAl--Q H3_STRPU 4 KQtARk-StGGkAprkQ H3_STRPU 79 KTeLRfqSsAVmAl--Q H3_VOLCA 4 KQtARk-StGGkAprkQ H3_VOLCA 78 KTdLRfqSqAVlAl--Q H3_YEAST 4 KQtARk-StGGkAprkQ H3_YEAST 79 KTdLRfqSsAIgAl--Q Fitness without relation: 18.8708 Relation between 3 and 6 giving score 19.2324 Statistics: 18.8708 19.2324 K-[ENQST]-x-[AL]-R-x(1,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q,(3,6) A -> (G), L -> (A), : 19.232403 NR MATCHES 47 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,G)(A,G) POS 12 34 5 67 8 9 H31_HUMAN 4 KQtARk-StGGkAprkQ H31_SCHPO 4 KQtARk-StGGkAprkQ H31_TETPY 4 KQtARk-StGAkAprkQ H32_BOVIN 4 KQtARk-StGGkAprkQ H32_MEDSA 4 KQtARk-StGGkAprkQ H32_ORYSA 4 KQtARk-StGGkAprkQ H32_TETAM 4 KQtARk-StGAkAprkQ H32_TETBO 4 KQtARk-StGAeAprkQ H32_TETPY 4 KQtARk-StGVkAprkQ H32_XENLA 4 KQtARk-StGGkAprkQ H33_HUMAN 4 KQtARk-StGGkAprkQ H33_SCHPO 4 KQtARk-StGGkAprkQ H33_TETTH 4 KQtARk-StGVkAprkQ H3_ACRFO 4 KQtARk-StGGkAprkQ H3_CAEEL 4 KQtARk-StGGkAprkQ H3_DROME 4 KQtARk-StGGkAprkQ H3_EMENI 4 KQtARk-StGGkAprkQ H3_ENCAL 4 KQtARk-StGGkAprkQ H3_MAIZE 4 KQtARk-StGGkAprkQ H3_NEUCR 4 KQtARk-StGGkAprkQ H3_PEA 4 KQtARk-StGGkAprkQ H3_PSAMI 4 KQtARk-StGGkAprkQ H3_STRPU 4 KQtARk-StGGkAprkQ H3_VOLCA 4 KQtARk-StGGkAprkQ H3_YEAST 4 KQtARk-StGGkAprkQ (L,A)(L,A) POS 12 34 5 67 8 9 H31_HUMAN 79 KTdLRfqSsAVmAl--Q H31_SCHPO 79 KTdLRfqSsAIgAl--Q H32_BOVIN 79 KTdLRfqSsAVmAl--Q H32_MEDSA 79 KTdLRfqShAVlAl--Q H33_HUMAN 79 KTdLRfqSaAIgAl--Q H33_SCHPO 79 KTdLRfqSsAIgAl--Q H34_CAIMO 79 KTdLRfqSsAVmAl--Q H34_MOUSE 78 KTdLRfqSaAIgAl--Q H3_ACRFO 79 KTdLRfqSsAVlAl--Q H3_CAEEL 79 KTdLRfqSsAVmAl--Q H3_DROME 79 KTdLRfqSsAVmAl--Q H3_EMENI 79 KSdLRfqSsAIgAl--Q H3_ENCAL 79 KTdLRfqSsAVaAl--Q H3_ENTHI 78 KSdLRfqSaAIsAl--Q H3_HORVU 24 KTdLRfqShAVlAl--Q H3_LEIIN 73 KEgLRfqSsAImAl--Q H3_MAIZE 79 KTdLRfqSsAVaAl--Q H3_PEA 79 KTdLRfqSsAVsAl--Q H3_PSAMI 79 KTeLRfqSsAVmAl--Q H3_STRPU 79 KTeLRfqSsAVmAl--Q H3_VOLCA 78 KTdLRfqSqAVlAl--Q H3_YEAST 79 KTdLRfqSsAIgAl--Q ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(1,3)-A-x-[KQ]-x-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR] NR MATCHES 43 POS 1 2 3 45 6 78 9 H31_HUMAN 21 AtkaArKsAPaTgGVkkphR H31_SCHPO 21 AskaArKaAPaTgGVkkphR H31_TETPY 21 AskaArKsAPaTgGIkkphR H31_TETPY 88 Avl-AlQeAAeAyLVglfeD H32_BOVIN 21 AtkaArKsAPaTgGVkkphR H32_BOVIN 88 Avm-AlQeASeAyLVglfeD H32_MEDSA 21 AtkaArKsAPtTgGVkkphR H32_MEDSA 88 Avl-AlQeAAeAyLVglfeD H32_ORYSA 21 AtkaArKsAPaTgGVkkphR H32_TETAM 21 AskaArKsAPaTgGIkkphR H32_TETBO 21 AskaArKsAPaTgGIkkphR H32_TETPY 88 Ail-AlQeAAeAyLVglfeD H32_XENLA 88 Avm-AlQeASeAyLValfeD H33_HUMAN 21 AtkaArKsAPsTgGVkkphR H33_HUMAN 87 AaigAlQeASeAyLVglfeD H33_HUMAN 88 Aig-AlQeASeAyLVglfeD H33_SCHPO 21 AskaArKaAPaTgGVkkphR H33_TETTH 88 Ail-AlQeAAeAyLVglfeD H34_CAIMO 88 Avm-AlQeASeAyLVglfeD H34_MOUSE 21 AtkaAxKsAPsTgGVkkshR H3_ACRFO 21 AtkaAaKsAPaTgGVkkphR H3_ACRFO 88 Avl-AlQeASeAyLVglfeD H3_CAEEL 88 Avm-AlQeAAeAyLVglfeD H3_DROME 21 AtkaArKsAPaTgGVkkphR H3_DROME 88 Avm-AlQeASeAyLValfeD H3_EMENI 21 AskaArKaAPsTgGVkkphR H3_ENCAL 21 AtkaArKsAPaTgGVkkphR H3_ENCAL 88 Ava-AlQeAAeAyLVglfeD H3_ENTHI 86 AaisAlQeAAeAyLVglfeD H3_ENTHI 87 Ais-AlQeAAeAyLVglfeD H3_HORVU 33 Avl-AlQeAAeAyLVglfeD H3_LEIIN 82 Aim-AlQeATeAyIVslmaD H3_MAIZE 21 AtkaArKsAPaTgGVkkphR H3_MAIZE 88 Ava-AlQeAAeAyLVglfeD H3_NEUCR 21 AskaArKsAPsTgGVkkphR H3_PEA 21 AtkaArKsAPaTgGVkkphR H3_PEA 88 Avs-AlQeAAeAyLVglfeD H3_PSAMI 21 AtkaArKsAPaTgGVkkphR H3_PSAMI 88 Avm-AlQeASeAyLVglfeD H3_STRPU 21 AtkaArKsAPaTgGVkkphR H3_STRPU 88 Avm-AlQeASeAyLVrlfeD H3_VOLCA 87 Avl-AlQeAAeAyLVglfeD H3_YEAST 21 AskaArKsAPsTgGVkkphR Fitness without relation: 17.5019 Relation between 6 and 9 giving score 17.8009 Statistics: 17.5019 17.8009 A-x(1,3)-A-x-[KQ]-x-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR],(6,9) A -> (D), T -> (R), : 17.800860 NR MATCHES 43 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,D)(A,D) POS 1 2 3 45 6 78 9 H31_TETPY 88 Avl-AlQeAAeAyLVglfeD H32_BOVIN 88 Avm-AlQeASeAyLVglfeD H32_MEDSA 88 Avl-AlQeAAeAyLVglfeD H32_TETPY 88 Ail-AlQeAAeAyLVglfeD H32_XENLA 88 Avm-AlQeASeAyLValfeD H33_HUMAN 87 AaigAlQeASeAyLVglfeD H33_HUMAN 88 Aig-AlQeASeAyLVglfeD H33_TETTH 88 Ail-AlQeAAeAyLVglfeD H34_CAIMO 88 Avm-AlQeASeAyLVglfeD H3_ACRFO 88 Avl-AlQeASeAyLVglfeD H3_CAEEL 88 Avm-AlQeAAeAyLVglfeD H3_DROME 88 Avm-AlQeASeAyLValfeD H3_ENCAL 88 Ava-AlQeAAeAyLVglfeD H3_ENTHI 86 AaisAlQeAAeAyLVglfeD H3_ENTHI 87 Ais-AlQeAAeAyLVglfeD H3_HORVU 33 Avl-AlQeAAeAyLVglfeD H3_LEIIN 82 Aim-AlQeATeAyIVslmaD H3_MAIZE 88 Ava-AlQeAAeAyLVglfeD H3_PEA 88 Avs-AlQeAAeAyLVglfeD H3_PSAMI 88 Avm-AlQeASeAyLVglfeD H3_STRPU 88 Avm-AlQeASeAyLVrlfeD H3_VOLCA 87 Avl-AlQeAAeAyLVglfeD (T,R)(T,R) POS 1 2 3 45 6 78 9 H31_HUMAN 21 AtkaArKsAPaTgGVkkphR H31_SCHPO 21 AskaArKaAPaTgGVkkphR H31_TETPY 21 AskaArKsAPaTgGIkkphR H32_BOVIN 21 AtkaArKsAPaTgGVkkphR H32_MEDSA 21 AtkaArKsAPtTgGVkkphR H32_ORYSA 21 AtkaArKsAPaTgGVkkphR H32_TETAM 21 AskaArKsAPaTgGIkkphR H32_TETBO 21 AskaArKsAPaTgGIkkphR H33_HUMAN 21 AtkaArKsAPsTgGVkkphR H33_SCHPO 21 AskaArKaAPaTgGVkkphR H34_MOUSE 21 AtkaAxKsAPsTgGVkkshR H3_ACRFO 21 AtkaAaKsAPaTgGVkkphR H3_DROME 21 AtkaArKsAPaTgGVkkphR H3_EMENI 21 AskaArKaAPsTgGVkkphR H3_ENCAL 21 AtkaArKsAPaTgGVkkphR H3_MAIZE 21 AtkaArKsAPaTgGVkkphR H3_NEUCR 21 AskaArKsAPsTgGVkkphR H3_PEA 21 AtkaArKsAPaTgGVkkphR H3_PSAMI 21 AtkaArKsAPaTgGVkkphR H3_STRPU 21 AtkaArKsAPaTgGVkkphR H3_YEAST 21 AskaArKsAPsTgGVkkphR ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(1,3)-K-x(2,3)-R-[FKR]-x(3)-[AG]-x(2)-[AP]-x-[KQR]-[EQ]-[AIL] NR MATCHES 49 POS 1 2 34 5 6 789 H31_HUMAN 1 Art-KqtaRKstgGkaPrKQL H31_HUMAN 75 AqdfKtdlRFqssAvmAlQEA H31_SCHPO 1 Art-KqtaRKstgGkaPrKQL H31_SCHPO 75 AqdfKtdlRFqssAigAlQEA H31_TETPY 1 Art-KqtaRKstgAkaPrKQL H31_TETPY 75 AhefKaelRFqssAvlAlQEA H32_BOVIN 1 Art-KqtaRKstgGkaPrKQL H32_BOVIN 75 AqdfKtdlRFqssAvmAlQEA H32_MEDSA 1 Art-KqtaRKstgGkaPrKQL H32_MEDSA 75 AqdfKtdlRFqshAvlAlQEA H32_ORYSA 1 Art-KqtaRKstgGkaPrKQL H32_ORYSA 75 AqdfKtdlRFqtsAvrAlQEA H32_TETAM 1 Art-KqtaRKstgAkaPrKQL H32_TETBO 1 Ara-KqtaRKstgAeaPrKQL H32_TETPY 75 AmemKndiRFqsqAilAlQEA H32_XENLA 1 Art-KqtaRKstgGkaPrKQL H32_XENLA 75 AqdfKtdlRFqrsAvmAlQEA H33_HUMAN 1 Art-KqtaRKstgGkaPrKQL H33_HUMAN 75 AqdfKtdlRFqsaAigAlQEA H33_SCHPO 1 Art-KqtaRKstgGkaPrKQL H33_SCHPO 75 AqdfKtdlRFqssAigAlQEA H33_TETTH 75 AmemKsdiRFqsqAilAlQEA H34_CAIMO 75 AqdfKtdlRFqssAvmAlQEA H34_MOUSE 1 Aht-KqtaRKstcGkaPrKQL H34_MOUSE 74 AqdfKtdlRFqsaAigAlQEA H3_ACRFO 1 Art-KqtaRKstgGkaPrKQL H3_ACRFO 75 AqdfKtdlRFqssAvlAlQEA H3_CAEEL 1 Art-KqtaRKstgGkaPrKQL H3_CAEEL 75 AqdfKtdlRFqssAvmAlQEA H3_DROME 1 Art-KqtaRKstgGkaPrKQL H3_DROME 75 AqdfKtdlRFqssAvmAlQEA H3_EMENI 1 Art-KqtaRKstgGkaPrKQL H3_ENCAL 1 Art-KqtaRKstgGkaPrKQL H3_ENCAL 75 AqdfKtdlRFqssAvaAlQEA H3_ENTHI 74 AqvsKsdlRFqsaAisAlQEA H3_HORVU 20 AqdfKtdlRFqshAvlAlQEA H3_LEIIN 26 AsgvKrshRRwrpGtcAiREI H3_MAIZE 1 Art-KqtaRKstgGkaPrKQL H3_MAIZE 75 AqdfKtdlRFqssAvaAlQEA H3_NEUCR 1 Art-KqtaRKstgGkaPrKQL H3_PEA 1 Art-KqtaRKstgGkaPrKQL H3_PEA 75 AqdfKtdlRFqssAvsAlQEA H3_PSAMI 1 Art-KqtaRKstgGkaPrKQL H3_PSAMI 75 AqdfKtelRFqssAvmAlQEA H3_STRPU 1 Art-KqtaRKstgGkaPrKQL H3_STRPU 75 AqdfKtelRFqssAvmAlQEA H3_VOLCA 1 Art-KqtaRKstgGkaPrKQL H3_VOLCA 74 AqdfKtdlRFqsqAvlAlQEA H3_YEAST 1 Art-KqtaRKstgGkaPrKQL Fitness without relation: 17.7552 Relation between 4 and 9 giving score 18.3374 Statistics: 17.7552 18.3374 A-x(1,3)-K-x(2,3)-R-[FKR]-x(3)-[AG]-x(2)-[AP]-x-[KQR]-[EQ]-[AIL],(4,9) F -> (A), K -> (L), R -> (I), : 18.337360 NR MATCHES 49 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (F,A)(F,A) POS 1 2 34 5 6 789 H31_HUMAN 75 AqdfKtdlRFqssAvmAlQEA H31_SCHPO 75 AqdfKtdlRFqssAigAlQEA H31_TETPY 75 AhefKaelRFqssAvlAlQEA H32_BOVIN 75 AqdfKtdlRFqssAvmAlQEA H32_MEDSA 75 AqdfKtdlRFqshAvlAlQEA H32_ORYSA 75 AqdfKtdlRFqtsAvrAlQEA H32_TETPY 75 AmemKndiRFqsqAilAlQEA H32_XENLA 75 AqdfKtdlRFqrsAvmAlQEA H33_HUMAN 75 AqdfKtdlRFqsaAigAlQEA H33_SCHPO 75 AqdfKtdlRFqssAigAlQEA H33_TETTH 75 AmemKsdiRFqsqAilAlQEA H34_CAIMO 75 AqdfKtdlRFqssAvmAlQEA H34_MOUSE 74 AqdfKtdlRFqsaAigAlQEA H3_ACRFO 75 AqdfKtdlRFqssAvlAlQEA H3_CAEEL 75 AqdfKtdlRFqssAvmAlQEA H3_DROME 75 AqdfKtdlRFqssAvmAlQEA H3_ENCAL 75 AqdfKtdlRFqssAvaAlQEA H3_ENTHI 74 AqvsKsdlRFqsaAisAlQEA H3_HORVU 20 AqdfKtdlRFqshAvlAlQEA H3_MAIZE 75 AqdfKtdlRFqssAvaAlQEA H3_PEA 75 AqdfKtdlRFqssAvsAlQEA H3_PSAMI 75 AqdfKtelRFqssAvmAlQEA H3_STRPU 75 AqdfKtelRFqssAvmAlQEA H3_VOLCA 74 AqdfKtdlRFqsqAvlAlQEA (K,L)(K,L) POS 1 2 34 5 6 789 H31_HUMAN 1 Art-KqtaRKstgGkaPrKQL H31_SCHPO 1 Art-KqtaRKstgGkaPrKQL H31_TETPY 1 Art-KqtaRKstgAkaPrKQL H32_BOVIN 1 Art-KqtaRKstgGkaPrKQL H32_MEDSA 1 Art-KqtaRKstgGkaPrKQL H32_ORYSA 1 Art-KqtaRKstgGkaPrKQL H32_TETAM 1 Art-KqtaRKstgAkaPrKQL H32_TETBO 1 Ara-KqtaRKstgAeaPrKQL H32_XENLA 1 Art-KqtaRKstgGkaPrKQL H33_HUMAN 1 Art-KqtaRKstgGkaPrKQL H33_SCHPO 1 Art-KqtaRKstgGkaPrKQL H34_MOUSE 1 Aht-KqtaRKstcGkaPrKQL H3_ACRFO 1 Art-KqtaRKstgGkaPrKQL H3_CAEEL 1 Art-KqtaRKstgGkaPrKQL H3_DROME 1 Art-KqtaRKstgGkaPrKQL H3_EMENI 1 Art-KqtaRKstgGkaPrKQL H3_ENCAL 1 Art-KqtaRKstgGkaPrKQL H3_MAIZE 1 Art-KqtaRKstgGkaPrKQL H3_NEUCR 1 Art-KqtaRKstgGkaPrKQL H3_PEA 1 Art-KqtaRKstgGkaPrKQL H3_PSAMI 1 Art-KqtaRKstgGkaPrKQL H3_STRPU 1 Art-KqtaRKstgGkaPrKQL H3_VOLCA 1 Art-KqtaRKstgGkaPrKQL H3_YEAST 1 Art-KqtaRKstgGkaPrKQL (R,I)(R,I) POS 1 2 34 5 6 789 H3_LEIIN 26 AsgvKrshRRwrpGtcAiREI ----------------------------------------- ID HISTONE_H3_1.pratt2 PA P-x(0,1)-K-x(0,2)-Q-L-A-x-[KR]-[AIL]-x(2)-[EK] NR MATCHES 46 POS 1 2 345 67 8 H31_HUMAN 16 PrK--QLAtKAarK H31_HUMAN 121 P-KdiQLArRIrgE H31_SCHPO 16 PrK--QLAsKAarK H31_SCHPO 121 P-KdmQLArRLrgE H31_TETPY 16 PrK--QLAsKAarK H32_BOVIN 16 PrK--QLAtKAarK H32_BOVIN 121 P-KdiQLArRIrgE H32_MEDSA 16 PrK--QLAtKAarK H32_MEDSA 121 P-KdiQLArRIrgE H32_ORYSA 16 PrK--QLAtKAarK H32_ORYSA 121 P-KdiQLArRIrgE H32_TETAM 16 PrK--QLAsKAarK H32_TETBO 16 PrK--QLAsKAarK H32_TETPY 16 PrK--QLAtKAarK H32_XENLA 121 P-KdiQLArRIrgE H33_HUMAN 16 PrK--QLAtKAarK H33_HUMAN 121 P-KdiQLArRIrgE H33_SCHPO 16 PrK--QLAsKAarK H33_SCHPO 121 P-KdmQLArRLrgE H33_TETTH 16 PrK--QLAtKAarK H34_CAIMO 16 PrK--QLAtKAahK H34_MOUSE 16 PrK--QLAtKAaxK H3_ACRFO 16 PrK--QLAtKAaaK H3_ACRFO 121 P-KdiQLArRIrgE H3_CAEEL 16 PrK--QLAtKAarK H3_CAEEL 121 P-KdiQLArRIrgE H3_DROME 16 PrK--QLAtKAarK H3_DROME 121 P-KdiQLArRIrgE H3_EMENI 16 PrK--QLAsKAarK H3_ENCAL 16 PrK--QLAtKAarK H3_ENCAL 121 P-KdiQLArRIrgE H3_ENTHI 120 P-KdmQLArRIrgE H3_HORVU 66 P-KdiQLArRIrgE H3_LEIIN 115 P-KdiQLAlRLrgE H3_MAIZE 16 PrK--QLAtKAarK H3_MAIZE 121 P-KdiQLArRIrgE H3_NEUCR 16 PrK--QLAsKAarK H3_PEA 16 PrK--QLAtKAarK H3_PEA 121 P-KdiQLArRIrgE H3_PSAMI 16 PrK--QLAtKAarK H3_PSAMI 121 P-KdiQLArRIrgE H3_STRPU 16 PrK--QLAtKAarK H3_STRPU 121 P-KdiQLArRIrgE H3_VOLCA 16 PrK--QLAtKAarK H3_VOLCA 120 P-KdiQLArRIrgE H3_YEAST 16 PrK--QLAsKAarK Fitness without relation: 17.7670 Relation between 6 and 8 giving score 18.0735 Statistics: 17.7670 18.0735 P-x(0,1)-K-x(0,2)-Q-L-A-x-[KR]-[AIL]-x(2)-[EK],(6,8) K -> (K), R -> (E), : 18.073549 NR MATCHES 46 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (K,K)(K,K) POS 1 2 345 67 8 H31_HUMAN 16 PrK--QLAtKAarK H31_SCHPO 16 PrK--QLAsKAarK H31_TETPY 16 PrK--QLAsKAarK H32_BOVIN 16 PrK--QLAtKAarK H32_MEDSA 16 PrK--QLAtKAarK H32_ORYSA 16 PrK--QLAtKAarK H32_TETAM 16 PrK--QLAsKAarK H32_TETBO 16 PrK--QLAsKAarK H32_TETPY 16 PrK--QLAtKAarK H33_HUMAN 16 PrK--QLAtKAarK H33_SCHPO 16 PrK--QLAsKAarK H33_TETTH 16 PrK--QLAtKAarK H34_CAIMO 16 PrK--QLAtKAahK H34_MOUSE 16 PrK--QLAtKAaxK H3_ACRFO 16 PrK--QLAtKAaaK H3_CAEEL 16 PrK--QLAtKAarK H3_DROME 16 PrK--QLAtKAarK H3_EMENI 16 PrK--QLAsKAarK H3_ENCAL 16 PrK--QLAtKAarK H3_MAIZE 16 PrK--QLAtKAarK H3_NEUCR 16 PrK--QLAsKAarK H3_PEA 16 PrK--QLAtKAarK H3_PSAMI 16 PrK--QLAtKAarK H3_STRPU 16 PrK--QLAtKAarK H3_VOLCA 16 PrK--QLAtKAarK H3_YEAST 16 PrK--QLAsKAarK (R,E)(R,E) POS 1 2 345 67 8 H31_HUMAN 121 P-KdiQLArRIrgE H31_SCHPO 121 P-KdmQLArRLrgE H32_BOVIN 121 P-KdiQLArRIrgE H32_MEDSA 121 P-KdiQLArRIrgE H32_ORYSA 121 P-KdiQLArRIrgE H32_XENLA 121 P-KdiQLArRIrgE H33_HUMAN 121 P-KdiQLArRIrgE H33_SCHPO 121 P-KdmQLArRLrgE H3_ACRFO 121 P-KdiQLArRIrgE H3_CAEEL 121 P-KdiQLArRIrgE H3_DROME 121 P-KdiQLArRIrgE H3_ENCAL 121 P-KdiQLArRIrgE H3_ENTHI 120 P-KdmQLArRIrgE H3_HORVU 66 P-KdiQLArRIrgE H3_LEIIN 115 P-KdiQLAlRLrgE H3_MAIZE 121 P-KdiQLArRIrgE H3_PEA 121 P-KdiQLArRIrgE H3_PSAMI 121 P-KdiQLArRIrgE H3_STRPU 121 P-KdiQLArRIrgE H3_VOLCA 120 P-KdiQLArRIrgE ----------------------------------------- ID HISTONE_H3_1.pratt2 PA K-x(0,2)-Q-L-A-x-[KR]-[AIL]-x(2)-[EK]-[RS] NR MATCHES 46 POS 1 234 56 78 H31_HUMAN 18 K--QLAtKAarKS H31_HUMAN 122 KdiQLArRIrgER H31_SCHPO 122 KdmQLArRLrgER H31_TETPY 18 K--QLAsKAarKS H31_TETPY 122 KdmQLArRIrgER H32_BOVIN 18 K--QLAtKAarKS H32_BOVIN 122 KdiQLArRIrgER H32_MEDSA 18 K--QLAtKAarKS H32_MEDSA 122 KdiQLArRIrgER H32_ORYSA 18 K--QLAtKAarKS H32_ORYSA 122 KdiQLArRIrgER H32_TETAM 18 K--QLAsKAarKS H32_TETBO 18 K--QLAsKAarKS H32_TETPY 18 K--QLAtKAarKS H32_TETPY 122 KdmQLArRIrgER H32_XENLA 122 KdiQLArRIrgER H33_HUMAN 18 K--QLAtKAarKS H33_HUMAN 122 KdiQLArRIrgER H33_SCHPO 122 KdmQLArRLrgER H33_TETTH 18 K--QLAtKAarKS H34_CAIMO 18 K--QLAtKAahKS H34_MOUSE 18 K--QLAtKAaxKS H3_ACRFO 18 K--QLAtKAaaKS H3_ACRFO 122 KdiQLArRIrgER H3_CAEEL 18 K--QLAtKAarKS H3_CAEEL 122 KdiQLArRIrgER H3_DROME 18 K--QLAtKAarKS H3_DROME 122 KdiQLArRIrgER H3_EMENI 122 KdiQLArRLrgER H3_ENCAL 18 K--QLAtKAarKS H3_ENCAL 122 KdiQLArRIrgER H3_ENTHI 121 KdmQLArRIrgER H3_HORVU 67 KdiQLArRIrgER H3_LEIIN 116 KdiQLAlRLrgER H3_MAIZE 18 K--QLAtKAarKS H3_MAIZE 122 KdiQLArRIrgER H3_NEUCR 18 K--QLAsKAarKS H3_NEUCR 122 KdiQLArRLrgER H3_PEA 18 K--QLAtKAarKS H3_PEA 122 KdiQLArRIrgER H3_PSAMI 18 K--QLAtKAarKS H3_PSAMI 122 KdiQLArRIrgER H3_STRPU 18 K--QLAtKAarKS H3_STRPU 122 KdiQLArRIrgER H3_VOLCA 121 KdiQLArRIrgER H3_YEAST 18 K--QLAsKAarKS Fitness without relation: 16.8814 Relation between 7 and 8 giving score 17.1879 Statistics: 16.8814 17.1879 K-x(0,2)-Q-L-A-x-[KR]-[AIL]-x(2)-[EK]-[RS],(7,8) E -> (R), K -> (S), : 17.187939 NR MATCHES 46 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (E,R)(E,R) POS 1 234 56 78 H31_HUMAN 122 KdiQLArRIrgER H31_SCHPO 122 KdmQLArRLrgER H31_TETPY 122 KdmQLArRIrgER H32_BOVIN 122 KdiQLArRIrgER H32_MEDSA 122 KdiQLArRIrgER H32_ORYSA 122 KdiQLArRIrgER H32_TETPY 122 KdmQLArRIrgER H32_XENLA 122 KdiQLArRIrgER H33_HUMAN 122 KdiQLArRIrgER H33_SCHPO 122 KdmQLArRLrgER H3_ACRFO 122 KdiQLArRIrgER H3_CAEEL 122 KdiQLArRIrgER H3_DROME 122 KdiQLArRIrgER H3_EMENI 122 KdiQLArRLrgER H3_ENCAL 122 KdiQLArRIrgER H3_ENTHI 121 KdmQLArRIrgER H3_HORVU 67 KdiQLArRIrgER H3_LEIIN 116 KdiQLAlRLrgER H3_MAIZE 122 KdiQLArRIrgER H3_NEUCR 122 KdiQLArRLrgER H3_PEA 122 KdiQLArRIrgER H3_PSAMI 122 KdiQLArRIrgER H3_STRPU 122 KdiQLArRIrgER H3_VOLCA 121 KdiQLArRIrgER (K,S)(K,S) POS 1 234 56 78 H31_HUMAN 18 K--QLAtKAarKS H31_TETPY 18 K--QLAsKAarKS H32_BOVIN 18 K--QLAtKAarKS H32_MEDSA 18 K--QLAtKAarKS H32_ORYSA 18 K--QLAtKAarKS H32_TETAM 18 K--QLAsKAarKS H32_TETBO 18 K--QLAsKAarKS H32_TETPY 18 K--QLAtKAarKS H33_HUMAN 18 K--QLAtKAarKS H33_TETTH 18 K--QLAtKAarKS H34_CAIMO 18 K--QLAtKAahKS H34_MOUSE 18 K--QLAtKAaxKS H3_ACRFO 18 K--QLAtKAaaKS H3_CAEEL 18 K--QLAtKAarKS H3_DROME 18 K--QLAtKAarKS H3_ENCAL 18 K--QLAtKAarKS H3_MAIZE 18 K--QLAtKAarKS H3_NEUCR 18 K--QLAsKAarKS H3_PEA 18 K--QLAtKAarKS H3_PSAMI 18 K--QLAtKAarKS H3_STRPU 18 K--QLAtKAarKS H3_YEAST 18 K--QLAsKAarKS ----------------------------------------- ID HISTONE_H3_1.pratt2 PA A-x(2)-A-x(3,4)-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR] NR MATCHES 41 POS 1 2 34 5 67 8 H31_HUMAN 21 AtkAarksAPaTgGVkkphR H31_SCHPO 21 AskAarkaAPaTgGVkkphR H31_TETPY 21 AskAarksAPaTgGIkkphR H31_TETPY 88 AvlAlqe-AAeAyLVglfeD H32_BOVIN 21 AtkAarksAPaTgGVkkphR H32_BOVIN 88 AvmAlqe-ASeAyLVglfeD H32_MEDSA 21 AtkAarksAPtTgGVkkphR H32_MEDSA 88 AvlAlqe-AAeAyLVglfeD H32_ORYSA 21 AtkAarksAPaTgGVkkphR H32_TETAM 21 AskAarksAPaTgGIkkphR H32_TETBO 21 AskAarksAPaTgGIkkphR H32_TETPY 88 AilAlqe-AAeAyLVglfeD H32_XENLA 88 AvmAlqe-ASeAyLValfeD H33_HUMAN 21 AtkAarksAPsTgGVkkphR H33_HUMAN 88 AigAlqe-ASeAyLVglfeD H33_SCHPO 21 AskAarkaAPaTgGVkkphR H33_TETTH 88 AilAlqe-AAeAyLVglfeD H34_CAIMO 88 AvmAlqe-ASeAyLVglfeD H34_MOUSE 21 AtkAaxksAPsTgGVkkshR H3_ACRFO 21 AtkAaaksAPaTgGVkkphR H3_ACRFO 88 AvlAlqe-ASeAyLVglfeD H3_CAEEL 88 AvmAlqe-AAeAyLVglfeD H3_DROME 21 AtkAarksAPaTgGVkkphR H3_DROME 88 AvmAlqe-ASeAyLValfeD H3_EMENI 21 AskAarkaAPsTgGVkkphR H3_ENCAL 21 AtkAarksAPaTgGVkkphR H3_ENCAL 88 AvaAlqe-AAeAyLVglfeD H3_ENTHI 87 AisAlqe-AAeAyLVglfeD H3_HORVU 33 AvlAlqe-AAeAyLVglfeD H3_LEIIN 82 AimAlqe-ATeAyIVslmaD H3_MAIZE 21 AtkAarksAPaTgGVkkphR H3_MAIZE 88 AvaAlqe-AAeAyLVglfeD H3_NEUCR 21 AskAarksAPsTgGVkkphR H3_PEA 21 AtkAarksAPaTgGVkkphR H3_PEA 88 AvsAlqe-AAeAyLVglfeD H3_PSAMI 21 AtkAarksAPaTgGVkkphR H3_PSAMI 88 AvmAlqe-ASeAyLVglfeD H3_STRPU 21 AtkAarksAPaTgGVkkphR H3_STRPU 88 AvmAlqe-ASeAyLVrlfeD H3_VOLCA 87 AvlAlqe-AAeAyLVglfeD H3_YEAST 21 AskAarksAPsTgGVkkphR Fitness without relation: 14.4218 Relation between 5 and 8 giving score 14.6868 Statistics: 14.4218 14.6868 A-x(2)-A-x(3,4)-A-[APST]-x-[AT]-x-[GIL]-[IV]-x(4)-[DR],(5,8) A -> (D), T -> (R), : 14.686762 NR MATCHES 41 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,D)(A,D) POS 1 2 34 5 67 8 H31_TETPY 88 AvlAlqe-AAeAyLVglfeD H32_BOVIN 88 AvmAlqe-ASeAyLVglfeD H32_MEDSA 88 AvlAlqe-AAeAyLVglfeD H32_TETPY 88 AilAlqe-AAeAyLVglfeD H32_XENLA 88 AvmAlqe-ASeAyLValfeD H33_HUMAN 88 AigAlqe-ASeAyLVglfeD H33_TETTH 88 AilAlqe-AAeAyLVglfeD H34_CAIMO 88 AvmAlqe-ASeAyLVglfeD H3_ACRFO 88 AvlAlqe-ASeAyLVglfeD H3_CAEEL 88 AvmAlqe-AAeAyLVglfeD H3_DROME 88 AvmAlqe-ASeAyLValfeD H3_ENCAL 88 AvaAlqe-AAeAyLVglfeD H3_ENTHI 87 AisAlqe-AAeAyLVglfeD H3_HORVU 33 AvlAlqe-AAeAyLVglfeD H3_LEIIN 82 AimAlqe-ATeAyIVslmaD H3_MAIZE 88 AvaAlqe-AAeAyLVglfeD H3_PEA 88 AvsAlqe-AAeAyLVglfeD H3_PSAMI 88 AvmAlqe-ASeAyLVglfeD H3_STRPU 88 AvmAlqe-ASeAyLVrlfeD H3_VOLCA 87 AvlAlqe-AAeAyLVglfeD (T,R)(T,R) POS 1 2 34 5 67 8 H31_HUMAN 21 AtkAarksAPaTgGVkkphR H31_SCHPO 21 AskAarkaAPaTgGVkkphR H31_TETPY 21 AskAarksAPaTgGIkkphR H32_BOVIN 21 AtkAarksAPaTgGVkkphR H32_MEDSA 21 AtkAarksAPtTgGVkkphR H32_ORYSA 21 AtkAarksAPaTgGVkkphR H32_TETAM 21 AskAarksAPaTgGIkkphR H32_TETBO 21 AskAarksAPaTgGIkkphR H33_HUMAN 21 AtkAarksAPsTgGVkkphR H33_SCHPO 21 AskAarkaAPaTgGVkkphR H34_MOUSE 21 AtkAaxksAPsTgGVkkshR H3_ACRFO 21 AtkAaaksAPaTgGVkkphR H3_DROME 21 AtkAarksAPaTgGVkkphR H3_EMENI 21 AskAarkaAPsTgGVkkphR H3_ENCAL 21 AtkAarksAPaTgGVkkphR H3_MAIZE 21 AtkAarksAPaTgGVkkphR H3_NEUCR 21 AskAarksAPsTgGVkkphR H3_PEA 21 AtkAarksAPaTgGVkkphR H3_PSAMI 21 AtkAarksAPaTgGVkkphR H3_STRPU 21 AtkAarksAPaTgGVkkphR H3_YEAST 21 AskAarksAPsTgGVkkphR ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- HISTONE_H3_2.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID HISTONE_H3_2.pratt2 PA R-x(0,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK] NR MATCHES 50 POS 1 2 34 5 6 789 CSE4_YEAST 177 RwqSmAImAl--QeASE H31_HUMAN 8 Rk-StGGkAprkQlATK H31_SCHPO 8 Rk-StGGkAprkQlASK H31_TETPY 8 Rk-StGAkAprkQlASK H31_TETPY 83 RfqSsAVlAl--QeAAE H32_BOVIN 8 Rk-StGGkAprkQlATK H32_BOVIN 83 RfqSsAVmAl--QeASE H32_MEDSA 8 Rk-StGGkAprkQlATK H32_MEDSA 83 RfqShAVlAl--QeAAE H32_ORYSA 8 Rk-StGGkAprkQlATK H32_TETAM 8 Rk-StGAkAprkQlASK H32_TETBO 8 Rk-StGAeAprkQlASK H32_TETPY 8 Rk-StGVkAprkQlATK H32_TETPY 83 RfqSqAIlAl--QeAAE H32_XENLA 8 Rk-StGGkAprkQlVTK H33_HUMAN 8 Rk-StGGkAprkQlATK H33_HUMAN 83 RfqSaAIgAl--QeASE H33_SCHPO 8 Rk-StGGkAprkQlASK H33_TETTH 8 Rk-StGVkAprkQlATK H33_TETTH 83 RfqSqAIlAl--QeAAE H34_CAIMO 83 RfqSsAVmAl--QeASE H34_MOUSE 82 RfqSaAIgAl--QeASE H3_ACRFO 8 Rk-StGGkAprkQlATK H3_ACRFO 83 RfqSsAVlAl--QeASE H3_CAEEL 8 Rk-StGGkAprkQlATK H3_CAEEL 83 RfqSsAVmAl--QeAAE H3_DROME 8 Rk-StGGkAprkQlATK H3_DROME 83 RfqSsAVmAl--QeASE H3_EMENI 8 Rk-StGGkAprkQlASK H3_ENCAL 8 Rk-StGGkAprkQlATK H3_ENCAL 83 RfqSsAVaAl--QeAAE H3_ENTHI 82 RfqSaAIsAl--QeAAE H3_HORVU 28 RfqShAVlAl--QeAAE H3_LEIIN 77 RfqSsAImAl--QeATE H3_MAIZE 8 Rk-StGGkAprkQlATK H3_MAIZE 83 RfqSsAVaAl--QeAAE H3_NEUCR 8 Rk-StGGkAprkQlASK H3_PEA 8 Rk-StGGkAprkQlATK H3_PEA 83 RfqSsAVsAl--QeAAE H3_PSAMI 8 Rk-StGGkAprkQlATK H3_PSAMI 83 RfqSsAVmAl--QeASE H3_STRPU 8 Rk-StGGkAprkQlATK H3_STRPU 83 RfqSsAVmAl--QeASE H3_VOLCA 8 Rk-StGGkAprkQlATK H3_VOLCA 82 RfqSqAVlAl--QeAAE H3_YEAST 8 Rk-StGGkAprkQlASK YL82_CAEEL 209 RirSdAInAl--QeASE YL82_CAEEL 211 R--SdAInAl--QeASE YMH3_CAEEL 236 RirSdAIsAl--QeAAE YMH3_CAEEL 238 R--SdAIsAl--QeAAE Fitness without relation: 18.2054 Relation between 3 and 9 giving score 18.6054 Statistics: 18.2054 18.6054 RP R-x(0,2)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK],(3,9) A -> (E), G -> (K), : 18.605353 NR MATCHES 50 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,E)(A,E) POS 1 2 34 5 6 789 CSE4_YEAST 177 RwqSmAImAl--QeASE H31_TETPY 83 RfqSsAVlAl--QeAAE H32_BOVIN 83 RfqSsAVmAl--QeASE H32_MEDSA 83 RfqShAVlAl--QeAAE H32_TETPY 83 RfqSqAIlAl--QeAAE H33_HUMAN 83 RfqSaAIgAl--QeASE H33_TETTH 83 RfqSqAIlAl--QeAAE H34_CAIMO 83 RfqSsAVmAl--QeASE H34_MOUSE 82 RfqSaAIgAl--QeASE H3_ACRFO 83 RfqSsAVlAl--QeASE H3_CAEEL 83 RfqSsAVmAl--QeAAE H3_DROME 83 RfqSsAVmAl--QeASE H3_ENCAL 83 RfqSsAVaAl--QeAAE H3_ENTHI 82 RfqSaAIsAl--QeAAE H3_HORVU 28 RfqShAVlAl--QeAAE H3_LEIIN 77 RfqSsAImAl--QeATE H3_MAIZE 83 RfqSsAVaAl--QeAAE H3_PEA 83 RfqSsAVsAl--QeAAE H3_PSAMI 83 RfqSsAVmAl--QeASE H3_STRPU 83 RfqSsAVmAl--QeASE H3_VOLCA 82 RfqSqAVlAl--QeAAE YL82_CAEEL 209 RirSdAInAl--QeASE YL82_CAEEL 211 R--SdAInAl--QeASE YMH3_CAEEL 236 RirSdAIsAl--QeAAE YMH3_CAEEL 238 R--SdAIsAl--QeAAE (G,K)(G,K) POS 1 2 34 5 6 789 H31_HUMAN 8 Rk-StGGkAprkQlATK H31_SCHPO 8 Rk-StGGkAprkQlASK H31_TETPY 8 Rk-StGAkAprkQlASK H32_BOVIN 8 Rk-StGGkAprkQlATK H32_MEDSA 8 Rk-StGGkAprkQlATK H32_ORYSA 8 Rk-StGGkAprkQlATK H32_TETAM 8 Rk-StGAkAprkQlASK H32_TETBO 8 Rk-StGAeAprkQlASK H32_TETPY 8 Rk-StGVkAprkQlATK H32_XENLA 8 Rk-StGGkAprkQlVTK H33_HUMAN 8 Rk-StGGkAprkQlATK H33_SCHPO 8 Rk-StGGkAprkQlASK H33_TETTH 8 Rk-StGVkAprkQlATK H3_ACRFO 8 Rk-StGGkAprkQlATK H3_CAEEL 8 Rk-StGGkAprkQlATK H3_DROME 8 Rk-StGGkAprkQlATK H3_EMENI 8 Rk-StGGkAprkQlASK H3_ENCAL 8 Rk-StGGkAprkQlATK H3_MAIZE 8 Rk-StGGkAprkQlATK H3_NEUCR 8 Rk-StGGkAprkQlASK H3_PEA 8 Rk-StGGkAprkQlATK H3_PSAMI 8 Rk-StGGkAprkQlATK H3_STRPU 8 Rk-StGGkAprkQlATK H3_VOLCA 8 Rk-StGGkAprkQlATK H3_YEAST 8 Rk-StGGkAprkQlASK ----------------------------------------- ID HISTONE_H3_2.pratt2 PA R-x(1,3)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK] NR MATCHES 48 POS 1 2 34 5 6 789 CSE4_YEAST 177 Rwq-SmAImAl--QeASE H31_HUMAN 8 Rk--StGGkAprkQlATK H31_SCHPO 8 Rk--StGGkAprkQlASK H31_TETPY 8 Rk--StGAkAprkQlASK H31_TETPY 83 Rfq-SsAVlAl--QeAAE H32_BOVIN 8 Rk--StGGkAprkQlATK H32_BOVIN 83 Rfq-SsAVmAl--QeASE H32_MEDSA 8 Rk--StGGkAprkQlATK H32_MEDSA 83 Rfq-ShAVlAl--QeAAE H32_ORYSA 8 Rk--StGGkAprkQlATK H32_TETAM 8 Rk--StGAkAprkQlASK H32_TETBO 8 Rk--StGAeAprkQlASK H32_TETPY 8 Rk--StGVkAprkQlATK H32_TETPY 83 Rfq-SqAIlAl--QeAAE H32_XENLA 8 Rk--StGGkAprkQlVTK H33_HUMAN 8 Rk--StGGkAprkQlATK H33_HUMAN 83 Rfq-SaAIgAl--QeASE H33_SCHPO 8 Rk--StGGkAprkQlASK H33_TETTH 8 Rk--StGVkAprkQlATK H33_TETTH 83 Rfq-SqAIlAl--QeAAE H34_CAIMO 83 Rfq-SsAVmAl--QeASE H34_MOUSE 82 Rfq-SaAIgAl--QeASE H3_ACRFO 8 Rk--StGGkAprkQlATK H3_ACRFO 83 Rfq-SsAVlAl--QeASE H3_CAEEL 8 Rk--StGGkAprkQlATK H3_CAEEL 83 Rfq-SsAVmAl--QeAAE H3_DROME 8 Rk--StGGkAprkQlATK H3_DROME 83 Rfq-SsAVmAl--QeASE H3_EMENI 8 Rk--StGGkAprkQlASK H3_ENCAL 8 Rk--StGGkAprkQlATK H3_ENCAL 83 Rfq-SsAVaAl--QeAAE H3_ENTHI 82 Rfq-SaAIsAl--QeAAE H3_HORVU 28 Rfq-ShAVlAl--QeAAE H3_LEIIN 77 Rfq-SsAImAl--QeATE H3_MAIZE 8 Rk--StGGkAprkQlATK H3_MAIZE 83 Rfq-SsAVaAl--QeAAE H3_NEUCR 8 Rk--StGGkAprkQlASK H3_PEA 8 Rk--StGGkAprkQlATK H3_PEA 83 Rfq-SsAVsAl--QeAAE H3_PSAMI 8 Rk--StGGkAprkQlATK H3_PSAMI 83 Rfq-SsAVmAl--QeASE H3_STRPU 8 Rk--StGGkAprkQlATK H3_STRPU 83 Rfq-SsAVmAl--QeASE H3_VOLCA 8 Rk--StGGkAprkQlATK H3_VOLCA 82 Rfq-SqAVlAl--QeAAE H3_YEAST 8 Rk--StGGkAprkQlASK YL82_CAEEL 209 Rir-SdAInAl--QeASE YMH3_CAEEL 236 Rir-SdAIsAl--QeAAE Fitness without relation: 18.1096 Relation between 3 and 9 giving score 18.4845 Statistics: 18.1096 18.4845 RP R-x(1,3)-S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK],(3,9) A -> (E), G -> (K), : 18.484520 NR MATCHES 48 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,E)(A,E) POS 1 2 34 5 6 789 CSE4_YEAST 177 Rwq-SmAImAl--QeASE H31_TETPY 83 Rfq-SsAVlAl--QeAAE H32_BOVIN 83 Rfq-SsAVmAl--QeASE H32_MEDSA 83 Rfq-ShAVlAl--QeAAE H32_TETPY 83 Rfq-SqAIlAl--QeAAE H33_HUMAN 83 Rfq-SaAIgAl--QeASE H33_TETTH 83 Rfq-SqAIlAl--QeAAE H34_CAIMO 83 Rfq-SsAVmAl--QeASE H34_MOUSE 82 Rfq-SaAIgAl--QeASE H3_ACRFO 83 Rfq-SsAVlAl--QeASE H3_CAEEL 83 Rfq-SsAVmAl--QeAAE H3_DROME 83 Rfq-SsAVmAl--QeASE H3_ENCAL 83 Rfq-SsAVaAl--QeAAE H3_ENTHI 82 Rfq-SaAIsAl--QeAAE H3_HORVU 28 Rfq-ShAVlAl--QeAAE H3_LEIIN 77 Rfq-SsAImAl--QeATE H3_MAIZE 83 Rfq-SsAVaAl--QeAAE H3_PEA 83 Rfq-SsAVsAl--QeAAE H3_PSAMI 83 Rfq-SsAVmAl--QeASE H3_STRPU 83 Rfq-SsAVmAl--QeASE H3_VOLCA 82 Rfq-SqAVlAl--QeAAE YL82_CAEEL 209 Rir-SdAInAl--QeASE YMH3_CAEEL 236 Rir-SdAIsAl--QeAAE (G,K)(G,K) POS 1 2 34 5 6 789 H31_HUMAN 8 Rk--StGGkAprkQlATK H31_SCHPO 8 Rk--StGGkAprkQlASK H31_TETPY 8 Rk--StGAkAprkQlASK H32_BOVIN 8 Rk--StGGkAprkQlATK H32_MEDSA 8 Rk--StGGkAprkQlATK H32_ORYSA 8 Rk--StGGkAprkQlATK H32_TETAM 8 Rk--StGAkAprkQlASK H32_TETBO 8 Rk--StGAeAprkQlASK H32_TETPY 8 Rk--StGVkAprkQlATK H32_XENLA 8 Rk--StGGkAprkQlVTK H33_HUMAN 8 Rk--StGGkAprkQlATK H33_SCHPO 8 Rk--StGGkAprkQlASK H33_TETTH 8 Rk--StGVkAprkQlATK H3_ACRFO 8 Rk--StGGkAprkQlATK H3_CAEEL 8 Rk--StGGkAprkQlATK H3_DROME 8 Rk--StGGkAprkQlATK H3_EMENI 8 Rk--StGGkAprkQlASK H3_ENCAL 8 Rk--StGGkAprkQlATK H3_MAIZE 8 Rk--StGGkAprkQlATK H3_NEUCR 8 Rk--StGGkAprkQlASK H3_PEA 8 Rk--StGGkAprkQlATK H3_PSAMI 8 Rk--StGGkAprkQlATK H3_STRPU 8 Rk--StGGkAprkQlATK H3_VOLCA 8 Rk--StGGkAprkQlATK H3_YEAST 8 Rk--StGGkAprkQlASK ----------------------------------------- ID HISTONE_H3_2.pratt2 PA S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK] NR MATCHES 48 POS 1 23 4 5 678 CSE4_YEAST 180 SmAImAl--QeASE H31_HUMAN 10 StGGkAprkQlATK H31_SCHPO 10 StGGkAprkQlASK H31_TETPY 10 StGAkAprkQlASK H31_TETPY 86 SsAVlAl--QeAAE H32_BOVIN 10 StGGkAprkQlATK H32_BOVIN 86 SsAVmAl--QeASE H32_MEDSA 10 StGGkAprkQlATK H32_MEDSA 86 ShAVlAl--QeAAE H32_ORYSA 10 StGGkAprkQlATK H32_TETAM 10 StGAkAprkQlASK H32_TETBO 10 StGAeAprkQlASK H32_TETPY 10 StGVkAprkQlATK H32_TETPY 86 SqAIlAl--QeAAE H32_XENLA 10 StGGkAprkQlVTK H33_HUMAN 10 StGGkAprkQlATK H33_HUMAN 86 SaAIgAl--QeASE H33_SCHPO 10 StGGkAprkQlASK H33_TETTH 10 StGVkAprkQlATK H33_TETTH 86 SqAIlAl--QeAAE H34_CAIMO 86 SsAVmAl--QeASE H34_MOUSE 85 SaAIgAl--QeASE H3_ACRFO 10 StGGkAprkQlATK H3_ACRFO 86 SsAVlAl--QeASE H3_CAEEL 10 StGGkAprkQlATK H3_CAEEL 86 SsAVmAl--QeAAE H3_DROME 10 StGGkAprkQlATK H3_DROME 86 SsAVmAl--QeASE H3_EMENI 10 StGGkAprkQlASK H3_ENCAL 10 StGGkAprkQlATK H3_ENCAL 86 SsAVaAl--QeAAE H3_ENTHI 85 SaAIsAl--QeAAE H3_HORVU 31 ShAVlAl--QeAAE H3_LEIIN 80 SsAImAl--QeATE H3_MAIZE 10 StGGkAprkQlATK H3_MAIZE 86 SsAVaAl--QeAAE H3_NEUCR 10 StGGkAprkQlASK H3_PEA 10 StGGkAprkQlATK H3_PEA 86 SsAVsAl--QeAAE H3_PSAMI 10 StGGkAprkQlATK H3_PSAMI 86 SsAVmAl--QeASE H3_STRPU 10 StGGkAprkQlATK H3_STRPU 86 SsAVmAl--QeASE H3_VOLCA 10 StGGkAprkQlATK H3_VOLCA 85 SqAVlAl--QeAAE H3_YEAST 10 StGGkAprkQlASK YL82_CAEEL 212 SdAInAl--QeASE YMH3_CAEEL 239 SdAIsAl--QeAAE Fitness without relation: 14.2104 Relation between 2 and 8 giving score 14.5853 Statistics: 14.2104 14.5853 S-x-[AG]-[AGIV]-x-A-x(1,3)-Q-x-[ASV]-[AST]-[EK],(2,8) A -> (E), G -> (K), : 14.585302 NR MATCHES 48 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (A,E)(A,E) POS 1 23 4 5 678 CSE4_YEAST 180 SmAImAl--QeASE H31_TETPY 86 SsAVlAl--QeAAE H32_BOVIN 86 SsAVmAl--QeASE H32_MEDSA 86 ShAVlAl--QeAAE H32_TETPY 86 SqAIlAl--QeAAE H33_HUMAN 86 SaAIgAl--QeASE H33_TETTH 86 SqAIlAl--QeAAE H34_CAIMO 86 SsAVmAl--QeASE H34_MOUSE 85 SaAIgAl--QeASE H3_ACRFO 86 SsAVlAl--QeASE H3_CAEEL 86 SsAVmAl--QeAAE H3_DROME 86 SsAVmAl--QeASE H3_ENCAL 86 SsAVaAl--QeAAE H3_ENTHI 85 SaAIsAl--QeAAE H3_HORVU 31 ShAVlAl--QeAAE H3_LEIIN 80 SsAImAl--QeATE H3_MAIZE 86 SsAVaAl--QeAAE H3_PEA 86 SsAVsAl--QeAAE H3_PSAMI 86 SsAVmAl--QeASE H3_STRPU 86 SsAVmAl--QeASE H3_VOLCA 85 SqAVlAl--QeAAE YL82_CAEEL 212 SdAInAl--QeASE YMH3_CAEEL 239 SdAIsAl--QeAAE (G,K)(G,K) POS 1 23 4 5 678 H31_HUMAN 10 StGGkAprkQlATK H31_SCHPO 10 StGGkAprkQlASK H31_TETPY 10 StGAkAprkQlASK H32_BOVIN 10 StGGkAprkQlATK H32_MEDSA 10 StGGkAprkQlATK H32_ORYSA 10 StGGkAprkQlATK H32_TETAM 10 StGAkAprkQlASK H32_TETBO 10 StGAeAprkQlASK H32_TETPY 10 StGVkAprkQlATK H32_XENLA 10 StGGkAprkQlVTK H33_HUMAN 10 StGGkAprkQlATK H33_SCHPO 10 StGGkAprkQlASK H33_TETTH 10 StGVkAprkQlATK H3_ACRFO 10 StGGkAprkQlATK H3_CAEEL 10 StGGkAprkQlATK H3_DROME 10 StGGkAprkQlATK H3_EMENI 10 StGGkAprkQlASK H3_ENCAL 10 StGGkAprkQlATK H3_MAIZE 10 StGGkAprkQlATK H3_NEUCR 10 StGGkAprkQlASK H3_PEA 10 StGGkAprkQlATK H3_PSAMI 10 StGGkAprkQlATK H3_STRPU 10 StGGkAprkQlATK H3_VOLCA 10 StGGkAprkQlATK H3_YEAST 10 StGGkAprkQlASK ----------------------------------------- ID HISTONE_H3_2.pratt2 PA R-x(1,2)-S-x(2,4)-A-[LP]-[QR]-[EK]-x(3)-[AST]-x-[AIL]-[AV] NR MATCHES 53 POS 1 2 3456 7 89 CSE4_YEAST 177 RwqSmaimALQEaseAyLV H31_HUMAN 8 Rk-StggkAPRKqlaTkAA H31_HUMAN 83 RfqSsavmALQEaceAyLV H31_SCHPO 8 Rk-StggkAPRKqlaSkAA H31_SCHPO 83 RfqSsaigALQEaveAyLV H31_TETPY 8 Rk-StgakAPRKqlaSkAA H31_TETPY 83 RfqSsavlALQEaaeAyLV H32_BOVIN 8 Rk-StggkAPRKqlaTkAA H32_BOVIN 83 RfqSsavmALQEaseAyLV H32_MEDSA 8 Rk-StggkAPRKqlaTkAA H32_MEDSA 83 RfqShavlALQEaaeAyLV H32_ORYSA 8 Rk-StggkAPRKqlaTkAA H32_TETAM 8 Rk-StgakAPRKqlaSkAA H32_TETBO 8 Rk-StgaeAPRKqlaSkAA H32_TETPY 8 Rk-StgvkAPRKqlaTkAA H32_TETPY 83 RfqSqailALQEaaeAyLV H32_XENLA 8 Rk-StggkAPRKqlvTkAA H33_HUMAN 8 Rk-StggkAPRKqlaTkAA H33_HUMAN 83 RfqSaaigALQEaseAyLV H33_SCHPO 8 Rk-StggkAPRKqlaSkAA H33_SCHPO 83 RfqSsaigALQEaveAyLV H33_TETTH 8 Rk-StgvkAPRKqlaTkAA H33_TETTH 83 RfqSqailALQEaaeAyLV H34_CAIMO 83 RfqSsavmALQEaseAyLV H34_MOUSE 8 Rk-StcgkAPRKqlaTkAA H3_ACRFO 8 Rk-StggkAPRKqlaTkAA H3_ACRFO 83 RfqSsavlALQEaseAyLV H3_CAEEL 8 Rk-StggkAPRKqlaTkAA H3_CAEEL 83 RfqSsavmALQEaaeAyLV H3_DROME 8 Rk-StggkAPRKqlaTkAA H3_DROME 83 RfqSsavmALQEaseAyLV H3_EMENI 8 Rk-StggkAPRKqlaSkAA H3_EMENI 83 RfqSsaigALQEsveAyLV H3_ENCAL 8 Rk-StggkAPRKqlaTkAA H3_ENCAL 83 RfqSsavaALQEaaeAyLV H3_ENTHI 82 RfqSaaisALQEaaeAyLV H3_HORVU 28 RfqShavlALQEaaeAyLV H3_LEIIN 77 RfqSsaimALQEateAyIV H3_MAIZE 8 Rk-StggkAPRKqlaTkAA H3_MAIZE 83 RfqSsavaALQEaaeAyLV H3_NEUCR 8 Rk-StggkAPRKqlaSkAA H3_PEA 8 Rk-StggkAPRKqlaTkAA H3_PEA 83 RfqSsavsALQEaaeAyLV H3_PSAMI 8 Rk-StggkAPRKqlaTkAA H3_PSAMI 83 RfqSsavmALQEaseAyLV H3_STRPU 8 Rk-StggkAPRKqlaTkAA H3_STRPU 83 RfqSsavmALQEaseAyLV H3_VOLCA 8 Rk-StggkAPRKqlaTkAA H3_VOLCA 82 RfqSqavlALQEaaeAyLV H3_YEAST 8 Rk-StggkAPRKqlaSkAA H3_YEAST 83 RfqSsaigALQEsveAyLV YL82_CAEEL 209 RirSdainALQEaseAlLV YMH3_CAEEL 236 RirSdaisALQEaaeAfLV Fitness without relation: 18.4614 Relation between 5 and 9 giving score 18.8945 Statistics: 18.4614 18.8945 RP R-x(1,2)-S-x(2,4)-A-[LP]-[QR]-[EK]-x(3)-[AST]-x-[AIL]-[AV],(5,9) Q -> (V), R -> (A), : 18.894537 NR MATCHES 53 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (Q,V)(Q,V) POS 1 2 3456 7 89 CSE4_YEAST 177 RwqSmaimALQEaseAyLV H31_HUMAN 83 RfqSsavmALQEaceAyLV H31_SCHPO 83 RfqSsaigALQEaveAyLV H31_TETPY 83 RfqSsavlALQEaaeAyLV H32_BOVIN 83 RfqSsavmALQEaseAyLV H32_MEDSA 83 RfqShavlALQEaaeAyLV H32_TETPY 83 RfqSqailALQEaaeAyLV H33_HUMAN 83 RfqSaaigALQEaseAyLV H33_SCHPO 83 RfqSsaigALQEaveAyLV H33_TETTH 83 RfqSqailALQEaaeAyLV H34_CAIMO 83 RfqSsavmALQEaseAyLV H3_ACRFO 83 RfqSsavlALQEaseAyLV H3_CAEEL 83 RfqSsavmALQEaaeAyLV H3_DROME 83 RfqSsavmALQEaseAyLV H3_EMENI 83 RfqSsaigALQEsveAyLV H3_ENCAL 83 RfqSsavaALQEaaeAyLV H3_ENTHI 82 RfqSaaisALQEaaeAyLV H3_HORVU 28 RfqShavlALQEaaeAyLV H3_LEIIN 77 RfqSsaimALQEateAyIV H3_MAIZE 83 RfqSsavaALQEaaeAyLV H3_PEA 83 RfqSsavsALQEaaeAyLV H3_PSAMI 83 RfqSsavmALQEaseAyLV H3_STRPU 83 RfqSsavmALQEaseAyLV H3_VOLCA 82 RfqSqavlALQEaaeAyLV H3_YEAST 83 RfqSsaigALQEsveAyLV YL82_CAEEL 209 RirSdainALQEaseAlLV YMH3_CAEEL 236 RirSdaisALQEaaeAfLV (R,A)(R,A) POS 1 2 3456 7 89 H31_HUMAN 8 Rk-StggkAPRKqlaTkAA H31_SCHPO 8 Rk-StggkAPRKqlaSkAA H31_TETPY 8 Rk-StgakAPRKqlaSkAA H32_BOVIN 8 Rk-StggkAPRKqlaTkAA H32_MEDSA 8 Rk-StggkAPRKqlaTkAA H32_ORYSA 8 Rk-StggkAPRKqlaTkAA H32_TETAM 8 Rk-StgakAPRKqlaSkAA H32_TETBO 8 Rk-StgaeAPRKqlaSkAA H32_TETPY 8 Rk-StgvkAPRKqlaTkAA H32_XENLA 8 Rk-StggkAPRKqlvTkAA H33_HUMAN 8 Rk-StggkAPRKqlaTkAA H33_SCHPO 8 Rk-StggkAPRKqlaSkAA H33_TETTH 8 Rk-StgvkAPRKqlaTkAA H34_MOUSE 8 Rk-StcgkAPRKqlaTkAA H3_ACRFO 8 Rk-StggkAPRKqlaTkAA H3_CAEEL 8 Rk-StggkAPRKqlaTkAA H3_DROME 8 Rk-StggkAPRKqlaTkAA H3_EMENI 8 Rk-StggkAPRKqlaSkAA H3_ENCAL 8 Rk-StggkAPRKqlaTkAA H3_MAIZE 8 Rk-StggkAPRKqlaTkAA H3_NEUCR 8 Rk-StggkAPRKqlaSkAA H3_PEA 8 Rk-StggkAPRKqlaTkAA H3_PSAMI 8 Rk-StggkAPRKqlaTkAA H3_STRPU 8 Rk-StggkAPRKqlaTkAA H3_VOLCA 8 Rk-StggkAPRKqlaTkAA H3_YEAST 8 Rk-StggkAPRKqlaSkAA ----------------------------------------- ID HISTONE_H3_2.pratt2 PA A-x(1,3)-A-x-[KQ]-x-A-[APST]-x-[AT]-x-[GIL]-[IV] NR MATCHES 46 POS 1 2 3 45 6 78 CSE4_YEAST 182 Aim-AlQeASeAyLV H31_HUMAN 21 AtkaArKsAPaTgGV H31_SCHPO 21 AskaArKaAPaTgGV H31_TETPY 21 AskaArKsAPaTgGI H31_TETPY 88 Avl-AlQeAAeAyLV H32_BOVIN 21 AtkaArKsAPaTgGV H32_BOVIN 88 Avm-AlQeASeAyLV H32_MEDSA 21 AtkaArKsAPtTgGV H32_MEDSA 88 Avl-AlQeAAeAyLV H32_ORYSA 21 AtkaArKsAPaTgGV H32_TETAM 21 AskaArKsAPaTgGI H32_TETBO 21 AskaArKsAPaTgGI H32_TETPY 88 Ail-AlQeAAeAyLV H32_XENLA 88 Avm-AlQeASeAyLV H33_HUMAN 21 AtkaArKsAPsTgGV H33_HUMAN 87 AaigAlQeASeAyLV H33_HUMAN 88 Aig-AlQeASeAyLV H33_SCHPO 21 AskaArKaAPaTgGV H33_TETTH 88 Ail-AlQeAAeAyLV H34_CAIMO 88 Avm-AlQeASeAyLV H34_MOUSE 21 AtkaAxKsAPsTgGV H3_ACRFO 21 AtkaAaKsAPaTgGV H3_ACRFO 88 Avl-AlQeASeAyLV H3_CAEEL 88 Avm-AlQeAAeAyLV H3_DROME 21 AtkaArKsAPaTgGV H3_DROME 88 Avm-AlQeASeAyLV H3_EMENI 21 AskaArKaAPsTgGV H3_ENCAL 21 AtkaArKsAPaTgGV H3_ENCAL 88 Ava-AlQeAAeAyLV H3_ENTHI 86 AaisAlQeAAeAyLV H3_ENTHI 87 Ais-AlQeAAeAyLV H3_HORVU 33 Avl-AlQeAAeAyLV H3_LEIIN 82 Aim-AlQeATeAyIV H3_MAIZE 21 AtkaArKsAPaTgGV H3_MAIZE 88 Ava-AlQeAAeAyLV H3_NEUCR 21 AskaArKsAPsTgGV H3_PEA 21 AtkaArKsAPaTgGV H3_PEA 88 Avs-AlQeAAeAyLV H3_PSAMI 21 AtkaArKsAPaTgGV H3_PSAMI 88 Avm-AlQeASeAyLV H3_STRPU 21 AtkaArKsAPaTgGV H3_STRPU 88 Avm-AlQeASeAyLV H3_VOLCA 87 Avl-AlQeAAeAyLV H3_YEAST 21 AskaArKsAPsTgGV YL82_CAEEL 214 Ain-AlQeASeAlLV YMH3_CAEEL 241 Ais-AlQeAAeAfLV Fitness without relation: 14.7901 Relation between 3 and 6 giving score 15.1099 Statistics: 14.7901 15.1099 A-x(1,3)-A-x-[KQ]-x-A-[APST]-x-[AT]-x-[GIL]-[IV],(3,6) K -> (T), Q -> (A), : 15.109919 NR MATCHES 46 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (K,T)(K,T) POS 1 2 3 45 6 78 H31_HUMAN 21 AtkaArKsAPaTgGV H31_SCHPO 21 AskaArKaAPaTgGV H31_TETPY 21 AskaArKsAPaTgGI H32_BOVIN 21 AtkaArKsAPaTgGV H32_MEDSA 21 AtkaArKsAPtTgGV H32_ORYSA 21 AtkaArKsAPaTgGV H32_TETAM 21 AskaArKsAPaTgGI H32_TETBO 21 AskaArKsAPaTgGI H33_HUMAN 21 AtkaArKsAPsTgGV H33_SCHPO 21 AskaArKaAPaTgGV H34_MOUSE 21 AtkaAxKsAPsTgGV H3_ACRFO 21 AtkaAaKsAPaTgGV H3_DROME 21 AtkaArKsAPaTgGV H3_EMENI 21 AskaArKaAPsTgGV H3_ENCAL 21 AtkaArKsAPaTgGV H3_MAIZE 21 AtkaArKsAPaTgGV H3_NEUCR 21 AskaArKsAPsTgGV H3_PEA 21 AtkaArKsAPaTgGV H3_PSAMI 21 AtkaArKsAPaTgGV H3_STRPU 21 AtkaArKsAPaTgGV H3_YEAST 21 AskaArKsAPsTgGV (Q,A)(Q,A) POS 1 2 3 45 6 78 CSE4_YEAST 182 Aim-AlQeASeAyLV H31_TETPY 88 Avl-AlQeAAeAyLV H32_BOVIN 88 Avm-AlQeASeAyLV H32_MEDSA 88 Avl-AlQeAAeAyLV H32_TETPY 88 Ail-AlQeAAeAyLV H32_XENLA 88 Avm-AlQeASeAyLV H33_HUMAN 87 AaigAlQeASeAyLV H33_HUMAN 88 Aig-AlQeASeAyLV H33_TETTH 88 Ail-AlQeAAeAyLV H34_CAIMO 88 Avm-AlQeASeAyLV H3_ACRFO 88 Avl-AlQeASeAyLV H3_CAEEL 88 Avm-AlQeAAeAyLV H3_DROME 88 Avm-AlQeASeAyLV H3_ENCAL 88 Ava-AlQeAAeAyLV H3_ENTHI 86 AaisAlQeAAeAyLV H3_ENTHI 87 Ais-AlQeAAeAyLV H3_HORVU 33 Avl-AlQeAAeAyLV H3_LEIIN 82 Aim-AlQeATeAyIV H3_MAIZE 88 Ava-AlQeAAeAyLV H3_PEA 88 Avs-AlQeAAeAyLV H3_PSAMI 88 Avm-AlQeASeAyLV H3_STRPU 88 Avm-AlQeASeAyLV H3_VOLCA 87 Avl-AlQeAAeAyLV YL82_CAEEL 214 Ain-AlQeASeAlLV YMH3_CAEEL 241 Ais-AlQeAAeAfLV ----------------------------------------- ID HISTONE_H3_2.pratt2 PA R-x(1,2)-Q-x(1,2)-A-x(3)-[AIL]-[QR]-[EK]-x(3)-[AST]-x(2)-[GLV] NR MATCHES 51 POS 1 2 3 456 7 8 CSE4_YEAST 177 Rw-QsmAimaLQEaseAylV H31_HUMAN 17 Rk-Ql-AtkaARKsapAtgG H31_HUMAN 83 Rf-QssAvmaLQEaceAylV H31_SCHPO 17 Rk-Ql-AskaARKaapAtgG H31_SCHPO 83 Rf-QssAigaLQEaveAylV H31_TETPY 17 Rk-Ql-AskaARKsapAtgG H31_TETPY 83 Rf-QssAvlaLQEaaeAylV H32_BOVIN 17 Rk-Ql-AtkaARKsapAtgG H32_BOVIN 83 Rf-QssAvmaLQEaseAylV H32_MEDSA 17 Rk-Ql-AtkaARKsapTtgG H32_MEDSA 83 Rf-QshAvlaLQEaaeAylV H32_ORYSA 17 Rk-Ql-AtkaARKsapAtgG H32_TETAM 17 Rk-Ql-AskaARKsapAtgG H32_TETBO 17 Rk-Ql-AskaARKsapAtgG H32_TETPY 83 Rf-QsqAilaLQEaaeAylV H32_XENLA 83 Rf-QrsAvmaLQEaseAylV H33_HUMAN 17 Rk-Ql-AtkaARKsapStgG H33_HUMAN 83 Rf-QsaAigaLQEaseAylV H33_SCHPO 17 Rk-Ql-AskaARKaapAtgG H33_SCHPO 83 Rf-QssAigaLQEaveAylV H33_TETTH 83 Rf-QsqAilaLQEaaeAylV H34_CAIMO 83 Rf-QssAvmaLQEaseAylV H34_MOUSE 82 Rf-QsaAigaLQEaseAnrV H3_ACRFO 83 Rf-QssAvlaLQEaseAylV H3_CAEEL 17 Rk-Ql-AtkaARKsapAsgG H3_CAEEL 83 Rf-QssAvmaLQEaaeAylV H3_DROME 17 Rk-Ql-AtkaARKsapAtgG H3_DROME 83 Rf-QssAvmaLQEaseAylV H3_EMENI 17 Rk-Ql-AskaARKaapStgG H3_EMENI 83 Rf-QssAigaLQEsveAylV H3_ENCAL 17 Rk-Ql-AtkaARKsapAtgG H3_ENCAL 83 Rf-QssAvaaLQEaaeAylV H3_ENTHI 82 Rf-QsaAisaLQEaaeAylV H3_HORVU 28 Rf-QshAvlaLQEaaeAylV H3_LEIIN 77 Rf-QssAimaLQEateAyiV H3_MAIZE 17 Rk-Ql-AtkaARKsapAtgG H3_MAIZE 83 Rf-QssAvaaLQEaaeAylV H3_NEUCR 17 Rk-Ql-AskaARKsapStgG H3_NEUCR 83 Rf-QssAiglLQEsveSylV H3_PEA 17 Rk-Ql-AtkaARKsapAtgG H3_PEA 83 Rf-QssAvsaLQEaaeAylV H3_PSAMI 17 Rk-Ql-AtkaARKsapAtgG H3_PSAMI 83 Rf-QssAvmaLQEaseAylV H3_STRPU 17 Rk-Ql-AtkaARKsapAtgG H3_STRPU 83 Rf-QssAvmaLQEaseAylV H3_VOLCA 17 Rk-Ql-AtkaARKtpaTggV H3_VOLCA 82 Rf-QsqAvlaLQEaaeAylV H3_YEAST 17 Rk-Ql-AskaARKsapStgG H3_YEAST 83 Rf-QssAigaLQEsveAylV YL82_CAEEL 165 RpgQk-AleeIRKyqeSedL YMH3_CAEEL 192 RpgQk-AleeIRKyqkTedL Fitness without relation: 14.7108 Relation between 5 and 6 giving score 15.1217 Statistics: 14.7108 15.1217 R-x(1,2)-Q-x(1,2)-A-x(3)-[AIL]-[QR]-[EK]-x(3)-[AST]-x(2)-[GLV],(5,6) Q -> (E), R -> (K), : 15.121730 NR MATCHES 51 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (Q,E)(Q,E) POS 1 2 3 456 7 8 CSE4_YEAST 177 Rw-QsmAimaLQEaseAylV H31_HUMAN 83 Rf-QssAvmaLQEaceAylV H31_SCHPO 83 Rf-QssAigaLQEaveAylV H31_TETPY 83 Rf-QssAvlaLQEaaeAylV H32_BOVIN 83 Rf-QssAvmaLQEaseAylV H32_MEDSA 83 Rf-QshAvlaLQEaaeAylV H32_TETPY 83 Rf-QsqAilaLQEaaeAylV H32_XENLA 83 Rf-QrsAvmaLQEaseAylV H33_HUMAN 83 Rf-QsaAigaLQEaseAylV H33_SCHPO 83 Rf-QssAigaLQEaveAylV H33_TETTH 83 Rf-QsqAilaLQEaaeAylV H34_CAIMO 83 Rf-QssAvmaLQEaseAylV H34_MOUSE 82 Rf-QsaAigaLQEaseAnrV H3_ACRFO 83 Rf-QssAvlaLQEaseAylV H3_CAEEL 83 Rf-QssAvmaLQEaaeAylV H3_DROME 83 Rf-QssAvmaLQEaseAylV H3_EMENI 83 Rf-QssAigaLQEsveAylV H3_ENCAL 83 Rf-QssAvaaLQEaaeAylV H3_ENTHI 82 Rf-QsaAisaLQEaaeAylV H3_HORVU 28 Rf-QshAvlaLQEaaeAylV H3_LEIIN 77 Rf-QssAimaLQEateAyiV H3_MAIZE 83 Rf-QssAvaaLQEaaeAylV H3_NEUCR 83 Rf-QssAiglLQEsveSylV H3_PEA 83 Rf-QssAvsaLQEaaeAylV H3_PSAMI 83 Rf-QssAvmaLQEaseAylV H3_STRPU 83 Rf-QssAvmaLQEaseAylV H3_VOLCA 82 Rf-QsqAvlaLQEaaeAylV H3_YEAST 83 Rf-QssAigaLQEsveAylV (R,K)(R,K) POS 1 2 3 456 7 8 H31_HUMAN 17 Rk-Ql-AtkaARKsapAtgG H31_SCHPO 17 Rk-Ql-AskaARKaapAtgG H31_TETPY 17 Rk-Ql-AskaARKsapAtgG H32_BOVIN 17 Rk-Ql-AtkaARKsapAtgG H32_MEDSA 17 Rk-Ql-AtkaARKsapTtgG H32_ORYSA 17 Rk-Ql-AtkaARKsapAtgG H32_TETAM 17 Rk-Ql-AskaARKsapAtgG H32_TETBO 17 Rk-Ql-AskaARKsapAtgG H33_HUMAN 17 Rk-Ql-AtkaARKsapStgG H33_SCHPO 17 Rk-Ql-AskaARKaapAtgG H3_CAEEL 17 Rk-Ql-AtkaARKsapAsgG H3_DROME 17 Rk-Ql-AtkaARKsapAtgG H3_EMENI 17 Rk-Ql-AskaARKaapStgG H3_ENCAL 17 Rk-Ql-AtkaARKsapAtgG H3_MAIZE 17 Rk-Ql-AtkaARKsapAtgG H3_NEUCR 17 Rk-Ql-AskaARKsapStgG H3_PEA 17 Rk-Ql-AtkaARKsapAtgG H3_PSAMI 17 Rk-Ql-AtkaARKsapAtgG H3_STRPU 17 Rk-Ql-AtkaARKsapAtgG H3_VOLCA 17 Rk-Ql-AtkaARKtpaTggV H3_YEAST 17 Rk-Ql-AskaARKsapStgG YL82_CAEEL 165 RpgQk-AleeIRKyqeSedL YMH3_CAEEL 192 RpgQk-AleeIRKyqkTedL ----------------------------------------- ID HISTONE_H3_2.pratt2 PA A-x(3,4)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV] NR MATCHES 53 POS 1 234 56 7 CSE4_YEAST 182 AimalQEAsEAylV H31_HUMAN 1 Artk-QTArKStgG H31_HUMAN 88 AvmalQEAcEAylV H31_SCHPO 1 Artk-QTArKStgG H31_SCHPO 88 AigalQEAvEAylV H31_TETPY 1 Artk-QTArKStgA H31_TETPY 88 AvlalQEAaEAylV H32_BOVIN 1 Artk-QTArKStgG H32_BOVIN 88 AvmalQEAsEAylV H32_MEDSA 1 Artk-QTArKStgG H32_MEDSA 88 AvlalQEAaEAylV H32_ORYSA 1 Artk-QTArKStgG H32_TETAM 1 Artk-QTArKStgA H32_TETBO 1 Arak-QTArKStgA H32_TETPY 1 Artk-QTArKStgV H32_TETPY 88 AilalQEAaEAylV H32_XENLA 1 Artk-QTArKStgG H32_XENLA 88 AvmalQEAsEAylV H33_HUMAN 1 Artk-QTArKStgG H33_HUMAN 88 AigalQEAsEAylV H33_SCHPO 1 Artk-QTArKStgG H33_SCHPO 88 AigalQEAvEAylV H33_TETTH 1 Artk-QTArKStgV H33_TETTH 88 AilalQEAaEAylV H34_CAIMO 88 AvmalQEAsEAylV H34_MOUSE 1 Ahtk-QTArKStcG H34_MOUSE 87 AigalQEAsEAnrV H3_ACRFO 1 Artk-QTArKStgG H3_ACRFO 88 AvlalQEAsEAylV H3_CAEEL 1 Artk-QTArKStgG H3_CAEEL 88 AvmalQEAaEAylV H3_DROME 1 Artk-QTArKStgG H3_DROME 88 AvmalQEAsEAylV H3_EMENI 1 Artk-QTArKStgG H3_ENCAL 1 Artk-QTArKStgG H3_ENCAL 88 AvaalQEAaEAylV H3_ENTHI 87 AisalQEAaEAylV H3_HORVU 33 AvlalQEAaEAylV H3_LEIIN 82 AimalQEAtEAyiV H3_MAIZE 1 Artk-QTArKStgG H3_MAIZE 88 AvaalQEAaEAylV H3_NEUCR 1 Artk-QTArKStgG H3_PEA 1 Artk-QTArKStgG H3_PEA 88 AvsalQEAaEAylV H3_PSAMI 1 Artk-QTArKStgG H3_PSAMI 88 AvmalQEAsEAylV H3_STRPU 1 Artk-QTArKStgG H3_STRPU 88 AvmalQEAsEAylV H3_VOLCA 1 Artk-QTArKStgG H3_VOLCA 87 AvlalQEAaEAylV H3_YEAST 1 Artk-QTArKStgG YL82_CAEEL 214 AinalQEAsEAllV YMH3_CAEEL 241 AisalQEAaEAflV Fitness without relation: 12.9954 Relation between 3 and 6 giving score 13.4244 Statistics: 12.9954 13.4244 A-x(3,4)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV],(3,6) E -> (A), T -> (S), : 13.424359 NR MATCHES 53 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (E,A)(E,A) POS 1 234 56 7 CSE4_YEAST 182 AimalQEAsEAylV H31_HUMAN 88 AvmalQEAcEAylV H31_SCHPO 88 AigalQEAvEAylV H31_TETPY 88 AvlalQEAaEAylV H32_BOVIN 88 AvmalQEAsEAylV H32_MEDSA 88 AvlalQEAaEAylV H32_TETPY 88 AilalQEAaEAylV H32_XENLA 88 AvmalQEAsEAylV H33_HUMAN 88 AigalQEAsEAylV H33_SCHPO 88 AigalQEAvEAylV H33_TETTH 88 AilalQEAaEAylV H34_CAIMO 88 AvmalQEAsEAylV H34_MOUSE 87 AigalQEAsEAnrV H3_ACRFO 88 AvlalQEAsEAylV H3_CAEEL 88 AvmalQEAaEAylV H3_DROME 88 AvmalQEAsEAylV H3_ENCAL 88 AvaalQEAaEAylV H3_ENTHI 87 AisalQEAaEAylV H3_HORVU 33 AvlalQEAaEAylV H3_LEIIN 82 AimalQEAtEAyiV H3_MAIZE 88 AvaalQEAaEAylV H3_PEA 88 AvsalQEAaEAylV H3_PSAMI 88 AvmalQEAsEAylV H3_STRPU 88 AvmalQEAsEAylV H3_VOLCA 87 AvlalQEAaEAylV YL82_CAEEL 214 AinalQEAsEAllV YMH3_CAEEL 241 AisalQEAaEAflV (T,S)(T,S) POS 1 234 56 7 H31_HUMAN 1 Artk-QTArKStgG H31_SCHPO 1 Artk-QTArKStgG H31_TETPY 1 Artk-QTArKStgA H32_BOVIN 1 Artk-QTArKStgG H32_MEDSA 1 Artk-QTArKStgG H32_ORYSA 1 Artk-QTArKStgG H32_TETAM 1 Artk-QTArKStgA H32_TETBO 1 Arak-QTArKStgA H32_TETPY 1 Artk-QTArKStgV H32_XENLA 1 Artk-QTArKStgG H33_HUMAN 1 Artk-QTArKStgG H33_SCHPO 1 Artk-QTArKStgG H33_TETTH 1 Artk-QTArKStgV H34_MOUSE 1 Ahtk-QTArKStcG H3_ACRFO 1 Artk-QTArKStgG H3_CAEEL 1 Artk-QTArKStgG H3_DROME 1 Artk-QTArKStgG H3_EMENI 1 Artk-QTArKStgG H3_ENCAL 1 Artk-QTArKStgG H3_MAIZE 1 Artk-QTArKStgG H3_NEUCR 1 Artk-QTArKStgG H3_PEA 1 Artk-QTArKStgG H3_PSAMI 1 Artk-QTArKStgG H3_STRPU 1 Artk-QTArKStgG H3_VOLCA 1 Artk-QTArKStgG H3_YEAST 1 Artk-QTArKStgG ----------------------------------------- ID HISTONE_H3_2.pratt2 PA A-x(1,3)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV] NR MATCHES 56 POS 1 234 56 7 CSE4_YEAST 185 Al--QEAsEAylV H31_HUMAN 1 ArtkQTArKStgG H31_HUMAN 91 Al--QEAcEAylV H31_SCHPO 1 ArtkQTArKStgG H31_SCHPO 91 Al--QEAvEAylV H31_TETPY 1 ArtkQTArKStgA H31_TETPY 91 Al--QEAaEAylV H32_BOVIN 1 ArtkQTArKStgG H32_BOVIN 91 Al--QEAsEAylV H32_MEDSA 1 ArtkQTArKStgG H32_MEDSA 91 Al--QEAaEAylV H32_ORYSA 1 ArtkQTArKStgG H32_TETAM 1 ArtkQTArKStgA H32_TETBO 1 ArakQTArKStgA H32_TETBO 3 Ak--QTArKStgA H32_TETPY 1 ArtkQTArKStgV H32_TETPY 91 Al--QEAaEAylV H32_XENLA 1 ArtkQTArKStgG H32_XENLA 91 Al--QEAsEAylV H33_HUMAN 1 ArtkQTArKStgG H33_HUMAN 91 Al--QEAsEAylV H33_SCHPO 1 ArtkQTArKStgG H33_SCHPO 91 Al--QEAvEAylV H33_TETTH 1 ArtkQTArKStgV H33_TETTH 91 Al--QEAaEAylV H34_CAIMO 91 Al--QEAsEAylV H34_MOUSE 1 AhtkQTArKStcG H34_MOUSE 90 Al--QEAsEAnrV H3_ACRFO 1 ArtkQTArKStgG H3_ACRFO 91 Al--QEAsEAylV H3_CAEEL 1 ArtkQTArKStgG H3_CAEEL 91 Al--QEAaEAylV H3_DROME 1 ArtkQTArKStgG H3_DROME 91 Al--QEAsEAylV H3_EMENI 1 ArtkQTArKStgG H3_ENCAL 1 ArtkQTArKStgG H3_ENCAL 90 Aal-QEAaEAylV H3_ENCAL 91 Al--QEAaEAylV H3_ENTHI 90 Al--QEAaEAylV H3_HORVU 36 Al--QEAaEAylV H3_LEIIN 85 Al--QEAtEAyiV H3_MAIZE 1 ArtkQTArKStgG H3_MAIZE 90 Aal-QEAaEAylV H3_MAIZE 91 Al--QEAaEAylV H3_NEUCR 1 ArtkQTArKStgG H3_PEA 1 ArtkQTArKStgG H3_PEA 91 Al--QEAaEAylV H3_PSAMI 1 ArtkQTArKStgG H3_PSAMI 91 Al--QEAsEAylV H3_STRPU 1 ArtkQTArKStgG H3_STRPU 91 Al--QEAsEAylV H3_VOLCA 1 ArtkQTArKStgG H3_VOLCA 90 Al--QEAaEAylV H3_YEAST 1 ArtkQTArKStgG YL82_CAEEL 217 Al--QEAsEAllV YMH3_CAEEL 244 Al--QEAaEAflV Fitness without relation: 13.0854 Relation between 3 and 6 giving score 13.5446 Statistics: 13.0854 13.5446 A-x(1,3)-Q-[ET]-A-x-[EK]-[AS]-x(2)-[AGV],(3,6) E -> (A), T -> (S), : 13.544642 NR MATCHES 56 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (E,A)(E,A) POS 1 234 56 7 CSE4_YEAST 185 Al--QEAsEAylV H31_HUMAN 91 Al--QEAcEAylV H31_SCHPO 91 Al--QEAvEAylV H31_TETPY 91 Al--QEAaEAylV H32_BOVIN 91 Al--QEAsEAylV H32_MEDSA 91 Al--QEAaEAylV H32_TETPY 91 Al--QEAaEAylV H32_XENLA 91 Al--QEAsEAylV H33_HUMAN 91 Al--QEAsEAylV H33_SCHPO 91 Al--QEAvEAylV H33_TETTH 91 Al--QEAaEAylV H34_CAIMO 91 Al--QEAsEAylV H34_MOUSE 90 Al--QEAsEAnrV H3_ACRFO 91 Al--QEAsEAylV H3_CAEEL 91 Al--QEAaEAylV H3_DROME 91 Al--QEAsEAylV H3_ENCAL 90 Aal-QEAaEAylV H3_ENCAL 91 Al--QEAaEAylV H3_ENTHI 90 Al--QEAaEAylV H3_HORVU 36 Al--QEAaEAylV H3_LEIIN 85 Al--QEAtEAyiV H3_MAIZE 90 Aal-QEAaEAylV H3_MAIZE 91 Al--QEAaEAylV H3_PEA 91 Al--QEAaEAylV H3_PSAMI 91 Al--QEAsEAylV H3_STRPU 91 Al--QEAsEAylV H3_VOLCA 90 Al--QEAaEAylV YL82_CAEEL 217 Al--QEAsEAllV YMH3_CAEEL 244 Al--QEAaEAflV (T,S)(T,S) POS 1 234 56 7 H31_HUMAN 1 ArtkQTArKStgG H31_SCHPO 1 ArtkQTArKStgG H31_TETPY 1 ArtkQTArKStgA H32_BOVIN 1 ArtkQTArKStgG H32_MEDSA 1 ArtkQTArKStgG H32_ORYSA 1 ArtkQTArKStgG H32_TETAM 1 ArtkQTArKStgA H32_TETBO 1 ArakQTArKStgA H32_TETBO 3 Ak--QTArKStgA H32_TETPY 1 ArtkQTArKStgV H32_XENLA 1 ArtkQTArKStgG H33_HUMAN 1 ArtkQTArKStgG H33_SCHPO 1 ArtkQTArKStgG H33_TETTH 1 ArtkQTArKStgV H34_MOUSE 1 AhtkQTArKStcG H3_ACRFO 1 ArtkQTArKStgG H3_CAEEL 1 ArtkQTArKStgG H3_DROME 1 ArtkQTArKStgG H3_EMENI 1 ArtkQTArKStgG H3_ENCAL 1 ArtkQTArKStgG H3_MAIZE 1 ArtkQTArKStgG H3_NEUCR 1 ArtkQTArKStgG H3_PEA 1 ArtkQTArKStgG H3_PSAMI 1 ArtkQTArKStgG H3_STRPU 1 ArtkQTArKStgG H3_VOLCA 1 ArtkQTArKStgG H3_YEAST 1 ArtkQTArKStgG ----------------------------------------- ID HISTONE_H3_2.pratt2 PA A-x-[KQ]-x-A-x(2,3)-A-x(2)-[TV]-x(2)-[FILMV]-x(2)-[PST] NR MATCHES 48 POS 1 2 3 4 5 6 7 CSE4_YEAST 185 AlQeAse-AylVglLehT H31_HUMAN 21 AtKaArksApaTggVkkP H31_HUMAN 91 AlQeAce-AylVglFedT H31_SCHPO 21 AsKaArkaApaTggVkkP H31_SCHPO 91 AlQeAve-AylVslFedT H31_TETPY 21 AsKaArksApaTggIkkP H31_TETPY 91 AlQeAae-AylVglFedT H32_BOVIN 21 AtKaArksApaTggVkkP H32_BOVIN 91 AlQeAse-AylVglFedT H32_MEDSA 21 AtKaArksAptTggVkkP H32_MEDSA 91 AlQeAae-AylVglFedT H32_ORYSA 21 AtKaArksApaTggVkkP H32_TETAM 21 AsKaArksApaTggIkkP H32_TETBO 21 AsKaArksApaTggIkkP H32_TETPY 91 AlQeAae-AylVglFedT H32_XENLA 91 AlQeAse-AylValFedT H33_HUMAN 21 AtKaArksApsTggVkkP H33_HUMAN 91 AlQeAse-AylVglFedT H33_SCHPO 21 AsKaArkaApaTggVkkP H33_SCHPO 91 AlQeAve-AylVslFedT H33_TETTH 91 AlQeAae-AylVglFedT H34_CAIMO 91 AlQeAse-AylVglFedT H34_MOUSE 21 AtKaAxksApsTggVkkS H34_MOUSE 90 AlQeAse-AnrVglFedT H3_ACRFO 21 AtKaAaksApaTggVkkP H3_ACRFO 91 AlQeAse-AylVglFedT H3_CAEEL 91 AlQeAae-AylVglFedT H3_DROME 21 AtKaArksApaTggVkkP H3_DROME 91 AlQeAse-AylValFedT H3_EMENI 21 AsKaArkaApsTggVkkP H3_ENCAL 21 AtKaArksApaTggVkkP H3_ENCAL 91 AlQeAae-AylVglFedT H3_ENTHI 90 AlQeAae-AylVglFedT H3_HORVU 36 AlQeAae-AylVglFedT H3_LEIIN 85 AlQeAte-AyiVslMadT H3_MAIZE 21 AtKaArksApaTggVkkP H3_MAIZE 91 AlQeAae-AylVglFedT H3_NEUCR 21 AsKaArksApsTggVkkP H3_PEA 21 AtKaArksApaTggVkkP H3_PEA 91 AlQeAae-AylVglFedT H3_PSAMI 21 AtKaArksApaTggVkkP H3_PSAMI 91 AlQeAse-AylVglFedT H3_STRPU 21 AtKaArksApaTggVkkP H3_STRPU 91 AlQeAse-AylVrlFedT H3_VOLCA 90 AlQeAae-AylVglFedT H3_YEAST 21 AsKaArksApsTggVkkP YL82_CAEEL 217 AlQeAse-AllVqmFdgS YMH3_CAEEL 244 AlQeAae-AflVemFegS Fitness without relation: 11.5425 Relation between 2 and 5 giving score 11.9157 Statistics: 11.5425 11.9157 A-x-[KQ]-x-A-x(2,3)-A-x(2)-[TV]-x(2)-[FILMV]-x(2)-[PST],(2,5) K -> (T), Q -> (V), : 11.915683 NR MATCHES 48 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (K,T)(K,T) POS 1 2 3 4 5 6 7 H31_HUMAN 21 AtKaArksApaTggVkkP H31_SCHPO 21 AsKaArkaApaTggVkkP H31_TETPY 21 AsKaArksApaTggIkkP H32_BOVIN 21 AtKaArksApaTggVkkP H32_MEDSA 21 AtKaArksAptTggVkkP H32_ORYSA 21 AtKaArksApaTggVkkP H32_TETAM 21 AsKaArksApaTggIkkP H32_TETBO 21 AsKaArksApaTggIkkP H33_HUMAN 21 AtKaArksApsTggVkkP H33_SCHPO 21 AsKaArkaApaTggVkkP H34_MOUSE 21 AtKaAxksApsTggVkkS H3_ACRFO 21 AtKaAaksApaTggVkkP H3_DROME 21 AtKaArksApaTggVkkP H3_EMENI 21 AsKaArkaApsTggVkkP H3_ENCAL 21 AtKaArksApaTggVkkP H3_MAIZE 21 AtKaArksApaTggVkkP H3_NEUCR 21 AsKaArksApsTggVkkP H3_PEA 21 AtKaArksApaTggVkkP H3_PSAMI 21 AtKaArksApaTggVkkP H3_STRPU 21 AtKaArksApaTggVkkP H3_YEAST 21 AsKaArksApsTggVkkP (Q,V)(Q,V) POS 1 2 3 4 5 6 7 CSE4_YEAST 185 AlQeAse-AylVglLehT H31_HUMAN 91 AlQeAce-AylVglFedT H31_SCHPO 91 AlQeAve-AylVslFedT H31_TETPY 91 AlQeAae-AylVglFedT H32_BOVIN 91 AlQeAse-AylVglFedT H32_MEDSA 91 AlQeAae-AylVglFedT H32_TETPY 91 AlQeAae-AylVglFedT H32_XENLA 91 AlQeAse-AylValFedT H33_HUMAN 91 AlQeAse-AylVglFedT H33_SCHPO 91 AlQeAve-AylVslFedT H33_TETTH 91 AlQeAae-AylVglFedT H34_CAIMO 91 AlQeAse-AylVglFedT H34_MOUSE 90 AlQeAse-AnrVglFedT H3_ACRFO 91 AlQeAse-AylVglFedT H3_CAEEL 91 AlQeAae-AylVglFedT H3_DROME 91 AlQeAse-AylValFedT H3_ENCAL 91 AlQeAae-AylVglFedT H3_ENTHI 90 AlQeAae-AylVglFedT H3_HORVU 36 AlQeAae-AylVglFedT H3_LEIIN 85 AlQeAte-AyiVslMadT H3_MAIZE 91 AlQeAae-AylVglFedT H3_PEA 91 AlQeAae-AylVglFedT H3_PSAMI 91 AlQeAse-AylVglFedT H3_STRPU 91 AlQeAse-AylVrlFedT H3_VOLCA 90 AlQeAae-AylVglFedT YL82_CAEEL 217 AlQeAse-AllVqmFdgS YMH3_CAEEL 244 AlQeAae-AflVemFegS ----------------------------------------- ID HISTONE_H3_2.pratt2 PA A-x-[KQ]-x-A-x(1,3)-A-x(2)-[TV]-x(2)-[FILMV]-x(2)-[PST] NR MATCHES 48 POS 1 2 3 4 5 6 7 CSE4_YEAST 185 AlQeAse-AylVglLehT H31_HUMAN 21 AtKaArksApaTggVkkP H31_HUMAN 91 AlQeAce-AylVglFedT H31_SCHPO 21 AsKaArkaApaTggVkkP H31_SCHPO 91 AlQeAve-AylVslFedT H31_TETPY 21 AsKaArksApaTggIkkP H31_TETPY 91 AlQeAae-AylVglFedT H32_BOVIN 21 AtKaArksApaTggVkkP H32_BOVIN 91 AlQeAse-AylVglFedT H32_MEDSA 21 AtKaArksAptTggVkkP H32_MEDSA 91 AlQeAae-AylVglFedT H32_ORYSA 21 AtKaArksApaTggVkkP H32_TETAM 21 AsKaArksApaTggIkkP H32_TETBO 21 AsKaArksApaTggIkkP H32_TETPY 91 AlQeAae-AylVglFedT H32_XENLA 91 AlQeAse-AylValFedT H33_HUMAN 21 AtKaArksApsTggVkkP H33_HUMAN 91 AlQeAse-AylVglFedT H33_SCHPO 21 AsKaArkaApaTggVkkP H33_SCHPO 91 AlQeAve-AylVslFedT H33_TETTH 91 AlQeAae-AylVglFedT H34_CAIMO 91 AlQeAse-AylVglFedT H34_MOUSE 21 AtKaAxksApsTggVkkS H34_MOUSE 90 AlQeAse-AnrVglFedT H3_ACRFO 21 AtKaAaksApaTggVkkP H3_ACRFO 91 AlQeAse-AylVglFedT H3_CAEEL 91 AlQeAae-AylVglFedT H3_DROME 21 AtKaArksApaTggVkkP H3_DROME 91 AlQeAse-AylValFedT H3_EMENI 21 AsKaArkaApsTggVkkP H3_ENCAL 21 AtKaArksApaTggVkkP H3_ENCAL 91 AlQeAae-AylVglFedT H3_ENTHI 90 AlQeAae-AylVglFedT H3_HORVU 36 AlQeAae-AylVglFedT H3_LEIIN 85 AlQeAte-AyiVslMadT H3_MAIZE 21 AtKaArksApaTggVkkP H3_MAIZE 91 AlQeAae-AylVglFedT H3_NEUCR 21 AsKaArksApsTggVkkP H3_PEA 21 AtKaArksApaTggVkkP H3_PEA 91 AlQeAae-AylVglFedT H3_PSAMI 21 AtKaArksApaTggVkkP H3_PSAMI 91 AlQeAse-AylVglFedT H3_STRPU 21 AtKaArksApaTggVkkP H3_STRPU 91 AlQeAse-AylVrlFedT H3_VOLCA 90 AlQeAae-AylVglFedT H3_YEAST 21 AsKaArksApsTggVkkP YL82_CAEEL 217 AlQeAse-AllVqmFdgS YMH3_CAEEL 244 AlQeAae-AflVemFegS Fitness without relation: 11.5425 Relation between 2 and 5 giving score 11.9157 Statistics: 11.5425 11.9157 A-x-[KQ]-x-A-x(1,3)-A-x(2)-[TV]-x(2)-[FILMV]-x(2)-[PST],(2,5) K -> (T), Q -> (V), : 11.915683 NR MATCHES 48 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (K,T)(K,T) POS 1 2 3 4 5 6 7 H31_HUMAN 21 AtKaArksApaTggVkkP H31_SCHPO 21 AsKaArkaApaTggVkkP H31_TETPY 21 AsKaArksApaTggIkkP H32_BOVIN 21 AtKaArksApaTggVkkP H32_MEDSA 21 AtKaArksAptTggVkkP H32_ORYSA 21 AtKaArksApaTggVkkP H32_TETAM 21 AsKaArksApaTggIkkP H32_TETBO 21 AsKaArksApaTggIkkP H33_HUMAN 21 AtKaArksApsTggVkkP H33_SCHPO 21 AsKaArkaApaTggVkkP H34_MOUSE 21 AtKaAxksApsTggVkkS H3_ACRFO 21 AtKaAaksApaTggVkkP H3_DROME 21 AtKaArksApaTggVkkP H3_EMENI 21 AsKaArkaApsTggVkkP H3_ENCAL 21 AtKaArksApaTggVkkP H3_MAIZE 21 AtKaArksApaTggVkkP H3_NEUCR 21 AsKaArksApsTggVkkP H3_PEA 21 AtKaArksApaTggVkkP H3_PSAMI 21 AtKaArksApaTggVkkP H3_STRPU 21 AtKaArksApaTggVkkP H3_YEAST 21 AsKaArksApsTggVkkP (Q,V)(Q,V) POS 1 2 3 4 5 6 7 CSE4_YEAST 185 AlQeAse-AylVglLehT H31_HUMAN 91 AlQeAce-AylVglFedT H31_SCHPO 91 AlQeAve-AylVslFedT H31_TETPY 91 AlQeAae-AylVglFedT H32_BOVIN 91 AlQeAse-AylVglFedT H32_MEDSA 91 AlQeAae-AylVglFedT H32_TETPY 91 AlQeAae-AylVglFedT H32_XENLA 91 AlQeAse-AylValFedT H33_HUMAN 91 AlQeAse-AylVglFedT H33_SCHPO 91 AlQeAve-AylVslFedT H33_TETTH 91 AlQeAae-AylVglFedT H34_CAIMO 91 AlQeAse-AylVglFedT H34_MOUSE 90 AlQeAse-AnrVglFedT H3_ACRFO 91 AlQeAse-AylVglFedT H3_CAEEL 91 AlQeAae-AylVglFedT H3_DROME 91 AlQeAse-AylValFedT H3_ENCAL 91 AlQeAae-AylVglFedT H3_ENTHI 90 AlQeAae-AylVglFedT H3_HORVU 36 AlQeAae-AylVglFedT H3_LEIIN 85 AlQeAte-AyiVslMadT H3_MAIZE 91 AlQeAae-AylVglFedT H3_PEA 91 AlQeAae-AylVglFedT H3_PSAMI 91 AlQeAse-AylVglFedT H3_STRPU 91 AlQeAse-AylVrlFedT H3_VOLCA 90 AlQeAae-AylVglFedT YL82_CAEEL 217 AlQeAse-AllVqmFdgS YMH3_CAEEL 244 AlQeAae-AflVemFegS ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- PAL_HISTIDASE.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID PAL_HISTIDASE.pratt2 PA G-[EST]-x-[GSTV]-x-S-x(0,1)-G-[DE]-x(2)-[DP]-x(4)-[AS] NR MATCHES 58 POS 12 3 4 56 7 8 HUTH_BACSU 137 GSlGaS-GDlaPlshlA HUTH_HUMAN 249 GTvGaS-GDlaPlshlA HUTH_MOUSE 249 GTvGaS-GDlaPlshlA HUTH_PSEPU 138 GSvGaS-GDlaPlatmS HUTH_RAT 249 GTvGaS-GDlaPlshlA HUTH_STRGR 141 GSlGcS-GDlaPlshcA PAL1_ARATH 207 GTiTaS-GDlvPlsyiA PAL1_ARATH 684 GEkVtSpGEefDkvftA PAL1_LYCES 186 GTiTaS-GDlvPlsyiA PAL1_LYCES 663 GEkVrSpGEeiDkvftA PAL1_PEA 205 GTiTaS-GDlvPlsyiA PAL1_PEA 682 GEkViSpGEecDklftA PAL1_PETCR 198 GTiTaS-GDlvPlsyiA PAL1_PHAVU 465 GEkVkSpGEefDklftA PAL1_SOLTU 202 GTvTaS-GDlvPlsyiA PAL1_SOYBN 195 GTiTaS-GDlvPlsyiA PAL1_SOYBN 672 GEkVrSpGEefDklftA PAL1_TOBAC 197 GTiTaS-GDlvPlsyiA PAL1_TOBAC 674 GEkVrSpGEecDkvftA PAL2_ARATH 676 GEkVvSpGEefDkvftA PAL2_PEA 206 GTiTaS-GDlvPlsyiA PAL2_PEA 683 GEkViSpGEecDklftA PAL2_PETCR 198 GTiTaS-GDlvPlsyiA PAL2_PETCR 675 GEkVtSpGEefDkvfiA PAL2_PHAVU 194 GTiTaS-GDlvPlsyiA PAL2_PHAVU 671 GEkViSpGEecDkvfsA PAL2_SOLTU 205 GTvTaS-GDlvPlsyiA PAL2_TOBAC 194 GTiTaS-GDlvPlsyiA PAL2_TOBAC 671 GEkVrSpGEecDkvftA PAL3_ARATH 188 GTiTaS-GDlvPlsyiA PAL3_ARATH 654 GEdVrSpGEdfDkvfrA PAL3_PETCR 200 GTiTaS-GDlvPlsyiA PAL3_PHAVU 194 GTiTaS-GDliPlsyiA PAL3_TOBAC 194 GTiTaS-GDlvPlsyiA PAL3_TOBAC 671 GEkVrSpGEecDkvftA PAL5_LYCES 203 GTiTaS-GDlvPlsyiA PAL5_LYCES 680 GEkVrSpGEeiDkvftA PALY_CAMSI 196 GTiTaS-GDlvPlsyiA PALY_CAMSI 673 GEkVrSpGEefDkvftA PALY_IPOBA 188 GTiTaS-GDlvPlsyiA PALY_IPOBA 666 GEkVrSpGEecDkvftA PALY_MALDO 194 GEkVrSpGEecDkvfqA PALY_MEDSA 207 GTiTaS-GDlvPlsyiA PALY_MEDSA 684 GEnViSpGEecDklfsA PALY_ORYSA 185 GTiTaS-GDlvPlsyiA PALY_PERAE 101 GTiTaS-GDlvPlsyiA PALY_PERAE 579 GEkVrSpGEefDkvfsA PALY_POPKI 164 GTiTaS-GDlvPlayiA PALY_POPKI 641 GEkVkSpGEdfDkvftA PALY_POPTR 197 GTiTaS-GDlvPlsyiA PALY_POPTR 674 GEkVqSpGEefDkvftA PALY_RHORB 213 GTiSaS-GDlsPlsyiA PALY_RHOTO 207 GTiSaS-GDlsPlsyiA PALY_STYHU 197 GTiTaS-GDlvPlsyiA PALY_STYHU 674 GEkVrSpGEecDklftA PALY_TRISU 207 GTiTaS-GDlvPlsyiA PALY_TRISU 684 GErViSpGEecDklftA PALY_VITVI 375 GEkVrSpGEdfDkvftA Fitness without relation: 15.0074 Relation between 6 and 7 giving score 15.4897 Statistics: 15.0074 15.4897 RP G-[EST]-x-[GSTV]-x-S-x(0,1)-G-[DE]-x(2)-[DP]-x(4)-[AS],(6,7) D -> (P), E -> (D), : 15.489657 NR MATCHES 58 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (D,P)(D,P) POS 12 3 4 56 7 8 HUTH_BACSU 137 GSlGaS-GDlaPlshlA HUTH_HUMAN 249 GTvGaS-GDlaPlshlA HUTH_MOUSE 249 GTvGaS-GDlaPlshlA HUTH_PSEPU 138 GSvGaS-GDlaPlatmS HUTH_RAT 249 GTvGaS-GDlaPlshlA HUTH_STRGR 141 GSlGcS-GDlaPlshcA PAL1_ARATH 207 GTiTaS-GDlvPlsyiA PAL1_LYCES 186 GTiTaS-GDlvPlsyiA PAL1_PEA 205 GTiTaS-GDlvPlsyiA PAL1_PETCR 198 GTiTaS-GDlvPlsyiA PAL1_SOLTU 202 GTvTaS-GDlvPlsyiA PAL1_SOYBN 195 GTiTaS-GDlvPlsyiA PAL1_TOBAC 197 GTiTaS-GDlvPlsyiA PAL2_PEA 206 GTiTaS-GDlvPlsyiA PAL2_PETCR 198 GTiTaS-GDlvPlsyiA PAL2_PHAVU 194 GTiTaS-GDlvPlsyiA PAL2_SOLTU 205 GTvTaS-GDlvPlsyiA PAL2_TOBAC 194 GTiTaS-GDlvPlsyiA PAL3_ARATH 188 GTiTaS-GDlvPlsyiA PAL3_PETCR 200 GTiTaS-GDlvPlsyiA PAL3_PHAVU 194 GTiTaS-GDliPlsyiA PAL3_TOBAC 194 GTiTaS-GDlvPlsyiA PAL5_LYCES 203 GTiTaS-GDlvPlsyiA PALY_CAMSI 196 GTiTaS-GDlvPlsyiA PALY_IPOBA 188 GTiTaS-GDlvPlsyiA PALY_MEDSA 207 GTiTaS-GDlvPlsyiA PALY_ORYSA 185 GTiTaS-GDlvPlsyiA PALY_PERAE 101 GTiTaS-GDlvPlsyiA PALY_POPKI 164 GTiTaS-GDlvPlayiA PALY_POPTR 197 GTiTaS-GDlvPlsyiA PALY_RHORB 213 GTiSaS-GDlsPlsyiA PALY_RHOTO 207 GTiSaS-GDlsPlsyiA PALY_STYHU 197 GTiTaS-GDlvPlsyiA PALY_TRISU 207 GTiTaS-GDlvPlsyiA (E,D)(E,D) POS 12 3 4 56 7 8 PAL1_ARATH 684 GEkVtSpGEefDkvftA PAL1_LYCES 663 GEkVrSpGEeiDkvftA PAL1_PEA 682 GEkViSpGEecDklftA PAL1_PHAVU 465 GEkVkSpGEefDklftA PAL1_SOYBN 672 GEkVrSpGEefDklftA PAL1_TOBAC 674 GEkVrSpGEecDkvftA PAL2_ARATH 676 GEkVvSpGEefDkvftA PAL2_PEA 683 GEkViSpGEecDklftA PAL2_PETCR 675 GEkVtSpGEefDkvfiA PAL2_PHAVU 671 GEkViSpGEecDkvfsA PAL2_TOBAC 671 GEkVrSpGEecDkvftA PAL3_ARATH 654 GEdVrSpGEdfDkvfrA PAL3_TOBAC 671 GEkVrSpGEecDkvftA PAL5_LYCES 680 GEkVrSpGEeiDkvftA PALY_CAMSI 673 GEkVrSpGEefDkvftA PALY_IPOBA 666 GEkVrSpGEecDkvftA PALY_MALDO 194 GEkVrSpGEecDkvfqA PALY_MEDSA 684 GEnViSpGEecDklfsA PALY_PERAE 579 GEkVrSpGEefDkvfsA PALY_POPKI 641 GEkVkSpGEdfDkvftA PALY_POPTR 674 GEkVqSpGEefDkvftA PALY_STYHU 674 GEkVrSpGEecDklftA PALY_TRISU 684 GErViSpGEecDklftA PALY_VITVI 375 GEkVrSpGEdfDkvftA ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- PHOTOSYSTEM_I_PSAAB.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID PHOTOSYSTEM_I_PSAAB.pratt2 PA S-x(0,2)-Q-x(1,2)-A-x-[DGT]-[APV] NR MATCHES 30 POS 1 2 3 45 PSAA_CHLRE 719 SitQgrAvGV PSAA_EUGGR 719 SitQgrAvGV PSAA_MAIZE 719 SiiQgrAvGV PSAA_MARPO 718 SitQgrAvGV PSAA_ORYSA 718 SiiQgrAvGV PSAA_PEA 729 SivQgrAvGV PSAA_PINTH 721 SivQgrAvGV PSAA_SPIOL 718 SivQgrAvGV PSAA_SYNEN 723 SiiQgrAvGV PSAA_SYNP2 707 SivQgrAvGV PSAA_SYNVU 723 SiiQgrAvGV PSAA_SYNY3 719 SiiQgrAvGV PSAA_TOBAC 718 SiiQgrAvGV PSAB_ANAVA 8 S--QdlAqDP PSAB_CHLMO 10 S--QglAqDP PSAB_CHLRE 10 S--QglArDP PSAB_EUGGR 9 S--QglAqDP PSAB_MAIZE 9 S--QglAqDP PSAB_MARPO 247 S--Qg-AgTA PSAB_ORYSA 9 S--QglAqDP PSAB_PEA 9 S--QgiAqDP PSAB_PINTH 9 S--QglAqDP PSAB_PINTH 247 S--Qg-AgTA PSAB_SPIOL 9 S--QglAqDP PSAB_SPIOL 247 S--Qg-AgTA PSAB_SYNEN 8 S--QdlAqDP PSAB_SYNP2 8 S--QdlAqDP PSAB_SYNP2 246 S--Qg-AgTA PSAB_SYNY3 8 S--QdlAqDP PSAB_TOBAC 9 S--QglAqDP Fitness without relation: 5.4676 Relation between 4 and 5 giving score 5.5172 Statistics: 5.4676 5.5172 S-x(0,2)-Q-x(1,2)-A-x-[DGT]-[APV],(4,5) D -> (P), G -> (V), T -> (A), : 5.517188 NR MATCHES 30 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (D,P)(D,P) POS 1 2 3 45 PSAB_ANAVA 8 S--QdlAqDP PSAB_CHLMO 10 S--QglAqDP PSAB_CHLRE 10 S--QglArDP PSAB_EUGGR 9 S--QglAqDP PSAB_MAIZE 9 S--QglAqDP PSAB_ORYSA 9 S--QglAqDP PSAB_PEA 9 S--QgiAqDP PSAB_PINTH 9 S--QglAqDP PSAB_SPIOL 9 S--QglAqDP PSAB_SYNEN 8 S--QdlAqDP PSAB_SYNP2 8 S--QdlAqDP PSAB_SYNY3 8 S--QdlAqDP PSAB_TOBAC 9 S--QglAqDP (G,V)(G,V) POS 1 2 3 45 PSAA_CHLRE 719 SitQgrAvGV PSAA_EUGGR 719 SitQgrAvGV PSAA_MAIZE 719 SiiQgrAvGV PSAA_MARPO 718 SitQgrAvGV PSAA_ORYSA 718 SiiQgrAvGV PSAA_PEA 729 SivQgrAvGV PSAA_PINTH 721 SivQgrAvGV PSAA_SPIOL 718 SivQgrAvGV PSAA_SYNEN 723 SiiQgrAvGV PSAA_SYNP2 707 SivQgrAvGV PSAA_SYNVU 723 SiiQgrAvGV PSAA_SYNY3 719 SiiQgrAvGV PSAA_TOBAC 718 SiiQgrAvGV (T,A)(T,A) POS 1 2 3 45 PSAB_MARPO 247 S--Qg-AgTA PSAB_PINTH 247 S--Qg-AgTA PSAB_SPIOL 247 S--Qg-AgTA PSAB_SYNP2 246 S--Qg-AgTA ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- PLANT_GLOBIN.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID PLANT_GLOBIN.pratt2 PA A-L-[LV]-x-[ST]-x(2)-E NR MATCHES 31 POS 123 4 5 HBP1_CASGL 113 ALLgTikE HBP2_CASGL 120 ALLeTikE HBPL_PARAD 120 ALLeTikE HBPL_TRETO 120 ALLeTikE HBP_CANLI 110 ALLkTfkE LGB1_LUPLU 9 ALVkSsfE LGB1_MEDSA 9 ALVnSswE LGB1_MEDSA 110 ALLkTikE LGB1_MEDTR 9 ALVnSsyE LGB1_MEDTR 110 ALLkTikE LGB1_PEA 8 ALVnSssE LGB1_SOYBN 9 ALVsSsfE LGB1_SOYBN 108 ALLkTikE LGB1_VICFA 108 ALLkTikE LGB2_LUPLU 9 ALVkSswE LGB2_MEDTR 9 ALVnSswE LGB2_MEDTR 109 ALLkTikE LGB2_SESRO 110 ALLkTlkE LGB2_SOYBN 9 ALVsSsfE LGB2_SOYBN 108 ALLkTikE LGB3_MEDSA 9 ALVnSswE LGB3_MEDSA 109 ALLkTikE LGB3_SESRO 110 ALLkTlkE LGB3_SOYBN 9 ALVsSsfE LGB3_SOYBN 108 ALLkTikE LGB4_MEDSA 9 ALVnSswE LGB4_MEDSA 110 ALLkTikE LGBA_PHAVU 9 ALVnSswE LGBA_SOYBN 9 ALVsSsfE LGB_PSOTE 10 ALVnSsyE LGB_PSOTE 109 ALLkTvkE Fitness without relation: 6.7403 Relation between 3 and 4 giving score 6.7672 Statistics: 6.7403 6.7672 A-L-[LV]-x-[ST]-x(2)-E,(3,4) L -> (T), V -> (S), : 6.767167 NR MATCHES 31 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (L,T)(L,T) POS 123 4 5 HBP1_CASGL 113 ALLgTikE HBP2_CASGL 120 ALLeTikE HBPL_PARAD 120 ALLeTikE HBPL_TRETO 120 ALLeTikE HBP_CANLI 110 ALLkTfkE LGB1_MEDSA 110 ALLkTikE LGB1_MEDTR 110 ALLkTikE LGB1_SOYBN 108 ALLkTikE LGB1_VICFA 108 ALLkTikE LGB2_MEDTR 109 ALLkTikE LGB2_SESRO 110 ALLkTlkE LGB2_SOYBN 108 ALLkTikE LGB3_MEDSA 109 ALLkTikE LGB3_SESRO 110 ALLkTlkE LGB3_SOYBN 108 ALLkTikE LGB4_MEDSA 110 ALLkTikE LGB_PSOTE 109 ALLkTvkE (V,S)(V,S) POS 123 4 5 LGB1_LUPLU 9 ALVkSsfE LGB1_MEDSA 9 ALVnSswE LGB1_MEDTR 9 ALVnSsyE LGB1_PEA 8 ALVnSssE LGB1_SOYBN 9 ALVsSsfE LGB2_LUPLU 9 ALVkSswE LGB2_MEDTR 9 ALVnSswE LGB2_SOYBN 9 ALVsSsfE LGB3_MEDSA 9 ALVnSswE LGB3_SOYBN 9 ALVsSsfE LGB4_MEDSA 9 ALVnSswE LGBA_PHAVU 9 ALVnSswE LGBA_SOYBN 9 ALVsSsfE LGB_PSOTE 10 ALVnSsyE ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- PROTEASOME_A.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID PROTEASOME_A.pratt2 PA S-x(0,2)-G-x(0,2)-R-x-[FHY]-x-[ILV]-[ES]-x(4)-[AGS] NR MATCHES 30 POS 1 2 3 4 56 7 PRC2_ARATH 14 SptG--RlFqVEyameA PRC2_DROME 14 SpqG--RlHqVEyameA PRC2_HUMAN 14 SpqG--RiHqIEyameA PRC2_RAT 14 SpqG--RiHqIEyameA PRC2_YEAST 14 SptG--RlFqVEyaleA PRC3_DROME 124 Sg-Gv-RpFgVSllicG PRC3_DROME 124 S--GgvRpFgVSllicG PRC3_HUMAN 123 Sg-Gv-RpFgVSllicG PRC3_HUMAN 123 S--GgvRpFgVSllicG PRC3_RAT 123 Sg-Gv-RpFgVSllicG PRC3_RAT 123 S--GgvRpFgVSllicG PRC3_XENLA 123 Sg-Gv-RpFgVSlliaG PRC3_XENLA 123 S--GgvRpFgVSlliaG PRC3_YEAST 124 Sg-Gv-RpFgVSlliaG PRC3_YEAST 124 S--GgvRpFgVSlliaG PRC6_ARATH 122 Sg-Gv-RpFgLStlivG PRC6_ARATH 122 S--GgvRpFgLStlivG PRC6_DICDI 124 Sg-Gv-RpFgIStlivG PRC6_DICDI 124 S--GgvRpFgIStlivG PRC6_DROME 123 Sn-Gr-RpFgIScligG PRC6_YEAST 123 Sg-Gv-RpFgVStliaG PRC6_YEAST 123 S--GgvRpFgVStliaG PRC8_CAEEL 15 SpdG--RiFqVEyaqkA PRC8_HUMAN 15 SpdG--RvFqVEyamkA PRC8_RAT 15 SpdG--RvFqVEyamkA PRC8_YEAST 15 SpdG--RnFqVEyavkA PRC9_DICDI 13 SpeG--RvYqVEyamtA PRC9_DROME 13 SpeG--RlYqVEyameA PRC9_HUMAN 13 SpeG--RlYqVEyameA PRC9_RAT 13 SpeG--RlYqVEyameA Fitness without relation: 10.3843 Relation between 6 and 7 giving score 10.9610 Statistics: 10.3843 10.9610 S-x(0,2)-G-x(0,2)-R-x-[FHY]-x-[ILV]-[ES]-x(4)-[AGS],(6,7) E -> (A), S -> (G), : 10.961008 NR MATCHES 30 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (E,A)(E,A) POS 1 2 3 4 56 7 PRC2_ARATH 14 SptG--RlFqVEyameA PRC2_DROME 14 SpqG--RlHqVEyameA PRC2_HUMAN 14 SpqG--RiHqIEyameA PRC2_RAT 14 SpqG--RiHqIEyameA PRC2_YEAST 14 SptG--RlFqVEyaleA PRC8_CAEEL 15 SpdG--RiFqVEyaqkA PRC8_HUMAN 15 SpdG--RvFqVEyamkA PRC8_RAT 15 SpdG--RvFqVEyamkA PRC8_YEAST 15 SpdG--RnFqVEyavkA PRC9_DICDI 13 SpeG--RvYqVEyamtA PRC9_DROME 13 SpeG--RlYqVEyameA PRC9_HUMAN 13 SpeG--RlYqVEyameA PRC9_RAT 13 SpeG--RlYqVEyameA (S,G)(S,G) POS 1 2 3 4 56 7 PRC3_DROME 124 Sg-Gv-RpFgVSllicG PRC3_DROME 124 S--GgvRpFgVSllicG PRC3_HUMAN 123 Sg-Gv-RpFgVSllicG PRC3_HUMAN 123 S--GgvRpFgVSllicG PRC3_RAT 123 Sg-Gv-RpFgVSllicG PRC3_RAT 123 S--GgvRpFgVSllicG PRC3_XENLA 123 Sg-Gv-RpFgVSlliaG PRC3_XENLA 123 S--GgvRpFgVSlliaG PRC3_YEAST 124 Sg-Gv-RpFgVSlliaG PRC3_YEAST 124 S--GgvRpFgVSlliaG PRC6_ARATH 122 Sg-Gv-RpFgLStlivG PRC6_ARATH 122 S--GgvRpFgLStlivG PRC6_DICDI 124 Sg-Gv-RpFgIStlivG PRC6_DICDI 124 S--GgvRpFgIStlivG PRC6_DROME 123 Sn-Gr-RpFgIScligG PRC6_YEAST 123 Sg-Gv-RpFgVStliaG PRC6_YEAST 123 S--GgvRpFgVStliaG ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- P_GLUCOSE_ISOMERASE_1.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID P_GLUCOSE_ISOMERASE_1.pratt2 PA N-x(1,3)-F-x(0,1)-D-[QW]-x-G-[GV]-[ER] NR MATCHES 37 POS 1 2 34 567 G6P1_CLALE 263 NafaFwDWvGGR G6P1_CLALE 505 Ns--F-DQwGVE G6P2_CLALE 263 NafaFwDWvGGR G6P2_CLALE 505 Ns--F-DQwGVE G6P3_CLALE 11 NafaFwDWvGGR G6P3_CLALE 253 Ns--F-DQwGVE G6PA_BACST 414 Np--F-DQpGVE G6PA_ORYSA 263 NafaFwDWvGGR G6PA_ORYSA 505 Ns--F-DQwGVE G6PB_BACST 409 Np--F-DQpGVE G6PB_ORYSA 264 NafaFwDWvGGR G6PB_ORYSA 506 Ns--F-DQwGVE G6PI_ARATH 264 NafaFwDWvGGR G6PI_ARATH 506 Ns--F-DQwGVE G6PI_CALFI 50 NmfeFwDWvGGR G6PI_CLAUN 259 NmfeFwDWvGGR G6PI_CLAUN 501 NiftF-DQwGVE G6PI_ECOLI 259 NmfeFwDWvGGR G6PI_ECOLI 501 NiftF-DQwGVE G6PI_HAEIN 273 NmfeFwDWvGGR G6PI_HAEIN 516 NifsF-DQwGVE G6PI_HUMAN 262 NmfeFwDWvGGR G6PI_HUMAN 508 Ns--F-DQwGVE G6PI_KLULA 510 NinsF-DQwGVE G6PI_KLULA 512 Ns--F-DQwGVE G6PI_LEIME 314 NmfaFwDWvGGR G6PI_MOUSE 261 NmfeFwDWvGGR G6PI_MOUSE 507 Ns--F-DQwGVE G6PI_PIG 261 NmfeFwDWvGGR G6PI_PIG 507 Ns--F-DQwGVE G6PI_PLAFA 283 NvfeFwDWvGGR G6PI_PLAFA 527 NinsF-DQwGVE G6PI_PLAFA 529 Ns--F-DQwGVE G6PI_TRYBB 315 NmfqFwDWvGGR G6PI_YEAST 506 NinsF-DQwGVE G6PI_YEAST 508 Ns--F-DQwGVE G6PI_ZYMMO 468 Ns--F-DQfGVE Fitness without relation: 14.0578 Relation between 6 and 7 giving score 14.2405 Statistics: 14.0578 14.2405 N-x(1,3)-F-x(0,1)-D-[QW]-x-G-[GV]-[ER],(6,7) G -> (R), V -> (E), : 14.240456 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,R)(G,R) POS 1 2 34 567 G6P1_CLALE 263 NafaFwDWvGGR G6P2_CLALE 263 NafaFwDWvGGR G6P3_CLALE 11 NafaFwDWvGGR G6PA_ORYSA 263 NafaFwDWvGGR G6PB_ORYSA 264 NafaFwDWvGGR G6PI_ARATH 264 NafaFwDWvGGR G6PI_CALFI 50 NmfeFwDWvGGR G6PI_CLAUN 259 NmfeFwDWvGGR G6PI_ECOLI 259 NmfeFwDWvGGR G6PI_HAEIN 273 NmfeFwDWvGGR G6PI_HUMAN 262 NmfeFwDWvGGR G6PI_LEIME 314 NmfaFwDWvGGR G6PI_MOUSE 261 NmfeFwDWvGGR G6PI_PIG 261 NmfeFwDWvGGR G6PI_PLAFA 283 NvfeFwDWvGGR G6PI_TRYBB 315 NmfqFwDWvGGR (V,E)(V,E) POS 1 2 34 567 G6P1_CLALE 505 Ns--F-DQwGVE G6P2_CLALE 505 Ns--F-DQwGVE G6P3_CLALE 253 Ns--F-DQwGVE G6PA_BACST 414 Np--F-DQpGVE G6PA_ORYSA 505 Ns--F-DQwGVE G6PB_BACST 409 Np--F-DQpGVE G6PB_ORYSA 506 Ns--F-DQwGVE G6PI_ARATH 506 Ns--F-DQwGVE G6PI_CLAUN 501 NiftF-DQwGVE G6PI_ECOLI 501 NiftF-DQwGVE G6PI_HAEIN 516 NifsF-DQwGVE G6PI_HUMAN 508 Ns--F-DQwGVE G6PI_KLULA 510 NinsF-DQwGVE G6PI_KLULA 512 Ns--F-DQwGVE G6PI_MOUSE 507 Ns--F-DQwGVE G6PI_PIG 507 Ns--F-DQwGVE G6PI_PLAFA 527 NinsF-DQwGVE G6PI_PLAFA 529 Ns--F-DQwGVE G6PI_YEAST 506 NinsF-DQwGVE G6PI_YEAST 508 Ns--F-DQwGVE G6PI_ZYMMO 468 Ns--F-DQfGVE ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- P_GLUCOSE_ISOMERASE_2.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID P_GLUCOSE_ISOMERASE_2.pratt2 PA N-x(1,3)-F-x(0,1)-D-[QW]-x-G-[GV]-[ER] NR MATCHES 37 POS 1 2 34 567 G6P1_CLALE 263 NafaFwDWvGGR G6P1_CLALE 505 Ns--F-DQwGVE G6P2_CLALE 263 NafaFwDWvGGR G6P2_CLALE 505 Ns--F-DQwGVE G6P3_CLALE 11 NafaFwDWvGGR G6P3_CLALE 253 Ns--F-DQwGVE G6PA_BACST 414 Np--F-DQpGVE G6PA_ORYSA 263 NafaFwDWvGGR G6PA_ORYSA 505 Ns--F-DQwGVE G6PB_BACST 409 Np--F-DQpGVE G6PB_ORYSA 264 NafaFwDWvGGR G6PB_ORYSA 506 Ns--F-DQwGVE G6PI_ARATH 264 NafaFwDWvGGR G6PI_ARATH 506 Ns--F-DQwGVE G6PI_CALFI 50 NmfeFwDWvGGR G6PI_CLAUN 259 NmfeFwDWvGGR G6PI_CLAUN 501 NiftF-DQwGVE G6PI_ECOLI 259 NmfeFwDWvGGR G6PI_ECOLI 501 NiftF-DQwGVE G6PI_HAEIN 273 NmfeFwDWvGGR G6PI_HAEIN 516 NifsF-DQwGVE G6PI_HUMAN 262 NmfeFwDWvGGR G6PI_HUMAN 508 Ns--F-DQwGVE G6PI_KLULA 510 NinsF-DQwGVE G6PI_KLULA 512 Ns--F-DQwGVE G6PI_LEIME 314 NmfaFwDWvGGR G6PI_MOUSE 261 NmfeFwDWvGGR G6PI_MOUSE 507 Ns--F-DQwGVE G6PI_PIG 261 NmfeFwDWvGGR G6PI_PIG 507 Ns--F-DQwGVE G6PI_PLAFA 283 NvfeFwDWvGGR G6PI_PLAFA 527 NinsF-DQwGVE G6PI_PLAFA 529 Ns--F-DQwGVE G6PI_TRYBB 315 NmfqFwDWvGGR G6PI_YEAST 506 NinsF-DQwGVE G6PI_YEAST 508 Ns--F-DQwGVE G6PI_ZYMMO 468 Ns--F-DQfGVE Fitness without relation: 14.0578 Relation between 6 and 7 giving score 14.2405 Statistics: 14.0578 14.2405 N-x(1,3)-F-x(0,1)-D-[QW]-x-G-[GV]-[ER],(6,7) G -> (R), V -> (E), : 14.240456 NR MATCHES 37 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,R)(G,R) POS 1 2 34 567 G6P1_CLALE 263 NafaFwDWvGGR G6P2_CLALE 263 NafaFwDWvGGR G6P3_CLALE 11 NafaFwDWvGGR G6PA_ORYSA 263 NafaFwDWvGGR G6PB_ORYSA 264 NafaFwDWvGGR G6PI_ARATH 264 NafaFwDWvGGR G6PI_CALFI 50 NmfeFwDWvGGR G6PI_CLAUN 259 NmfeFwDWvGGR G6PI_ECOLI 259 NmfeFwDWvGGR G6PI_HAEIN 273 NmfeFwDWvGGR G6PI_HUMAN 262 NmfeFwDWvGGR G6PI_LEIME 314 NmfaFwDWvGGR G6PI_MOUSE 261 NmfeFwDWvGGR G6PI_PIG 261 NmfeFwDWvGGR G6PI_PLAFA 283 NvfeFwDWvGGR G6PI_TRYBB 315 NmfqFwDWvGGR (V,E)(V,E) POS 1 2 34 567 G6P1_CLALE 505 Ns--F-DQwGVE G6P2_CLALE 505 Ns--F-DQwGVE G6P3_CLALE 253 Ns--F-DQwGVE G6PA_BACST 414 Np--F-DQpGVE G6PA_ORYSA 505 Ns--F-DQwGVE G6PB_BACST 409 Np--F-DQpGVE G6PB_ORYSA 506 Ns--F-DQwGVE G6PI_ARATH 506 Ns--F-DQwGVE G6PI_CLAUN 501 NiftF-DQwGVE G6PI_ECOLI 501 NiftF-DQwGVE G6PI_HAEIN 516 NifsF-DQwGVE G6PI_HUMAN 508 Ns--F-DQwGVE G6PI_KLULA 510 NinsF-DQwGVE G6PI_KLULA 512 Ns--F-DQwGVE G6PI_MOUSE 507 Ns--F-DQwGVE G6PI_PIG 507 Ns--F-DQwGVE G6PI_PLAFA 527 NinsF-DQwGVE G6PI_PLAFA 529 Ns--F-DQwGVE G6PI_YEAST 506 NinsF-DQwGVE G6PI_YEAST 508 Ns--F-DQwGVE G6PI_ZYMMO 468 Ns--F-DQfGVE ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- RAN.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID RAN.pratt2 PA V-x(2,3)-G-[AGTV]-[GT]-x(2)-T-x(1,2)-V-x-R-H-x-T-G-[DE]-x-[ER]-x-[KQR]-Y-x-[APS]-T-x-G-V-[ENS]-[IV]-x(2)-[LM]-x-[FL]-x-[TV]-[ANT] NR MATCHES 21 POS 11 1 11 11 1112 2 2 22 1 234 5 6 78 901 2 34 56 7890 1 2 34 GSP1_YEAST 18 VgdgGTGktTf-VkRHlTGEfEkKYiATiGVEVhpLsFyTN GSP1_YEAST 18 Vgd-GGTgkTtfVkRHlTGEfEkKYiATiGVEVhpLsFyTN GSP2_YEAST 19 VgdgGTGktTf-VkRHlTGEfEkKYiATiGVEVhpLsFyTN GSP2_YEAST 19 Vgd-GGTgkTtfVkRHlTGEfEkKYiATiGVEVhpLsFyTN RAN1_ARATH 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN1_ARATH 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN1_LYCES 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN1_LYCES 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_ARATH 1 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_ARATH 1 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_LYCES 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_LYCES 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RANA_TOBAC 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RANA_TOBAC 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RANB_TOBAC 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RANB_TOBAC 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN_BRUMA 15 VgdgGTGktTf-VkRHlTGDfEkKYvATlGVEVhpLiFhTN RAN_BRUMA 15 Vgd-GGTgkTtfVkRHlTGDfEkKYvATlGVEVhpLiFhTN RAN_CANFA 16 VgdgGTGktTf-VkRHlTGEfEkKYvATlGVEVhpLvFhTN RAN_CANFA 16 Vgd-GGTgkTtfVkRHlTGEfEkKYvATlGVEVhpLvFhTN RAN_CHICK 16 VgdgGTGktTf-VkRHlTGEfEkKYvATlGVEVhpLvFhTN Fitness without relation: 61.9639 Relation between 3 and 4 giving score 62.5122 Statistics: 61.9639 62.5122 V-x(2,3)-G-[AGTV]-[GT]-x(2)-T-x(1,2)-V-x-R-H-x-T-G-[DE]-x-[ER]-x-[KQR]-Y-x-[APS]-T-x-G-V-[ENS]-[IV]-x(2)-[LM]-x-[FL]-x-[TV]-[ANT],(3,4) G -> (T), T -> (G), : 62.512246 NR MATCHES 21 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,T)(G,T) POS 11 1 11 11 1112 2 2 22 1 234 5 6 78 901 2 34 56 7890 1 2 34 GSP1_YEAST 18 Vgd-GGTgkTtfVkRHlTGEfEkKYiATiGVEVhpLsFyTN GSP2_YEAST 19 Vgd-GGTgkTtfVkRHlTGEfEkKYiATiGVEVhpLsFyTN RAN1_ARATH 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN1_LYCES 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_ARATH 1 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_LYCES 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RANA_TOBAC 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RANB_TOBAC 19 Vgd-GGTgkTtfVkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN_BRUMA 15 Vgd-GGTgkTtfVkRHlTGDfEkKYvATlGVEVhpLiFhTN RAN_CANFA 16 Vgd-GGTgkTtfVkRHlTGEfEkKYvATlGVEVhpLvFhTN (T,G)(T,G) POS 11 1 11 11 1112 2 2 22 1 234 5 6 78 901 2 34 56 7890 1 2 34 GSP1_YEAST 18 VgdgGTGktTf-VkRHlTGEfEkKYiATiGVEVhpLsFyTN GSP2_YEAST 19 VgdgGTGktTf-VkRHlTGEfEkKYiATiGVEVhpLsFyTN RAN1_ARATH 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN1_LYCES 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_ARATH 1 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN2_LYCES 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RANA_TOBAC 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RANB_TOBAC 19 VgdgGTGktTf-VkRHlTGEfEkKYePTiGVEVhpLdFfTN RAN_BRUMA 15 VgdgGTGktTf-VkRHlTGDfEkKYvATlGVEVhpLiFhTN RAN_CANFA 16 VgdgGTGktTf-VkRHlTGEfEkKYvATlGVEVhpLvFhTN RAN_CHICK 16 VgdgGTGktTf-VkRHlTGEfEkKYvATlGVEVhpLvFhTN ----------------------------------------- ID RAN.pratt2 PA G-K-T-T-F-V-x-R-H-x-T-G-x(0,2)-E-[FK]-[EKR] NR MATCHES 21 POS 1 111 123456 78 90 123 GSP1_YEAST 24 GKTTFVkRHlTG--EFE GSP1_YEAST 24 GKTTFVkRHlTGefEKK GSP2_YEAST 25 GKTTFVkRHlTG--EFE GSP2_YEAST 25 GKTTFVkRHlTGefEKK RAN1_ARATH 25 GKTTFVkRHlTG--EFE RAN1_ARATH 25 GKTTFVkRHlTGefEKK RAN1_LYCES 25 GKTTFVkRHlTG--EFE RAN1_LYCES 25 GKTTFVkRHlTGefEKK RAN2_ARATH 7 GKTTFVkRHlTG--EFE RAN2_ARATH 7 GKTTFVkRHlTGefEKK RAN2_LYCES 25 GKTTFVkRHlTG--EFE RAN2_LYCES 25 GKTTFVkRHlTGefEKK RANA_TOBAC 25 GKTTFVkRHlTG--EFE RANA_TOBAC 25 GKTTFVkRHlTGefEKK RANB_TOBAC 25 GKTTFVkRHlTG--EFE RANB_TOBAC 25 GKTTFVkRHlTGefEKK RAN_BRUMA 21 GKTTFVkRHlTGdfEKK RAN_CANFA 22 GKTTFVkRHlTG--EFE RAN_CANFA 22 GKTTFVkRHlTGefEKK RAN_CHICK 22 GKTTFVkRHlTG--EFE RAN_CHICK 22 GKTTFVkRHlTGefEKK Fitness without relation: 34.6766 Relation between 12 and 13 giving score 34.7712 Statistics: 34.6766 34.7712 G-K-T-T-F-V-x-R-H-x-T-G-x(0,2)-E-[FK]-[EKR],(12,13) F -> (E), K -> (K), : 34.771183 NR MATCHES 21 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (F,E)(F,E) POS 1 111 123456 78 90 123 GSP1_YEAST 24 GKTTFVkRHlTG--EFE GSP2_YEAST 25 GKTTFVkRHlTG--EFE RAN1_ARATH 25 GKTTFVkRHlTG--EFE RAN1_LYCES 25 GKTTFVkRHlTG--EFE RAN2_ARATH 7 GKTTFVkRHlTG--EFE RAN2_LYCES 25 GKTTFVkRHlTG--EFE RANA_TOBAC 25 GKTTFVkRHlTG--EFE RANB_TOBAC 25 GKTTFVkRHlTG--EFE RAN_CANFA 22 GKTTFVkRHlTG--EFE RAN_CHICK 22 GKTTFVkRHlTG--EFE (K,K)(K,K) POS 1 111 123456 78 90 123 GSP1_YEAST 24 GKTTFVkRHlTGefEKK GSP2_YEAST 25 GKTTFVkRHlTGefEKK RAN1_ARATH 25 GKTTFVkRHlTGefEKK RAN1_LYCES 25 GKTTFVkRHlTGefEKK RAN2_ARATH 7 GKTTFVkRHlTGefEKK RAN2_LYCES 25 GKTTFVkRHlTGefEKK RANA_TOBAC 25 GKTTFVkRHlTGefEKK RANB_TOBAC 25 GKTTFVkRHlTGefEKK RAN_BRUMA 21 GKTTFVkRHlTGdfEKK RAN_CANFA 22 GKTTFVkRHlTGefEKK RAN_CHICK 22 GKTTFVkRHlTGefEKK ----------------------------------------- ID RAN.pratt2 PA K-T-T-F-V-x-R-H-x-T-G-x(0,2)-E-[FK]-[EKR] NR MATCHES 21 POS 111 12345 67 89 012 GSP1_YEAST 25 KTTFVkRHlTG--EFE GSP1_YEAST 25 KTTFVkRHlTGefEKK GSP2_YEAST 26 KTTFVkRHlTG--EFE GSP2_YEAST 26 KTTFVkRHlTGefEKK RAN1_ARATH 26 KTTFVkRHlTG--EFE RAN1_ARATH 26 KTTFVkRHlTGefEKK RAN1_LYCES 26 KTTFVkRHlTG--EFE RAN1_LYCES 26 KTTFVkRHlTGefEKK RAN2_ARATH 8 KTTFVkRHlTG--EFE RAN2_ARATH 8 KTTFVkRHlTGefEKK RAN2_LYCES 26 KTTFVkRHlTG--EFE RAN2_LYCES 26 KTTFVkRHlTGefEKK RANA_TOBAC 26 KTTFVkRHlTG--EFE RANA_TOBAC 26 KTTFVkRHlTGefEKK RANB_TOBAC 26 KTTFVkRHlTG--EFE RANB_TOBAC 26 KTTFVkRHlTGefEKK RAN_BRUMA 22 KTTFVkRHlTGdfEKK RAN_CANFA 23 KTTFVkRHlTG--EFE RAN_CANFA 23 KTTFVkRHlTGefEKK RAN_CHICK 23 KTTFVkRHlTG--EFE RAN_CHICK 23 KTTFVkRHlTGefEKK Fitness without relation: 30.9827 Relation between 11 and 12 giving score 31.0773 Statistics: 30.9827 31.0773 K-T-T-F-V-x-R-H-x-T-G-x(0,2)-E-[FK]-[EKR],(11,12) F -> (E), K -> (K), : 31.077323 NR MATCHES 21 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (F,E)(F,E) POS 111 12345 67 89 012 GSP1_YEAST 25 KTTFVkRHlTG--EFE GSP2_YEAST 26 KTTFVkRHlTG--EFE RAN1_ARATH 26 KTTFVkRHlTG--EFE RAN1_LYCES 26 KTTFVkRHlTG--EFE RAN2_ARATH 8 KTTFVkRHlTG--EFE RAN2_LYCES 26 KTTFVkRHlTG--EFE RANA_TOBAC 26 KTTFVkRHlTG--EFE RANB_TOBAC 26 KTTFVkRHlTG--EFE RAN_CANFA 23 KTTFVkRHlTG--EFE RAN_CHICK 23 KTTFVkRHlTG--EFE (K,K)(K,K) POS 111 12345 67 89 012 GSP1_YEAST 25 KTTFVkRHlTGefEKK GSP2_YEAST 26 KTTFVkRHlTGefEKK RAN1_ARATH 26 KTTFVkRHlTGefEKK RAN1_LYCES 26 KTTFVkRHlTGefEKK RAN2_ARATH 8 KTTFVkRHlTGefEKK RAN2_LYCES 26 KTTFVkRHlTGefEKK RANA_TOBAC 26 KTTFVkRHlTGefEKK RANB_TOBAC 26 KTTFVkRHlTGefEKK RAN_BRUMA 22 KTTFVkRHlTGdfEKK RAN_CANFA 23 KTTFVkRHlTGefEKK RAN_CHICK 23 KTTFVkRHlTGefEKK ----------------------------------------- ID RAN.pratt2 PA T-T-F-V-x-R-H-x-T-G-x(0,2)-E-[FK]-[EKR] NR MATCHES 21 POS 11 1234 56 78 901 GSP1_YEAST 26 TTFVkRHlTG--EFE GSP1_YEAST 26 TTFVkRHlTGefEKK GSP2_YEAST 27 TTFVkRHlTG--EFE GSP2_YEAST 27 TTFVkRHlTGefEKK RAN1_ARATH 27 TTFVkRHlTG--EFE RAN1_ARATH 27 TTFVkRHlTGefEKK RAN1_LYCES 27 TTFVkRHlTG--EFE RAN1_LYCES 27 TTFVkRHlTGefEKK RAN2_ARATH 9 TTFVkRHlTG--EFE RAN2_ARATH 9 TTFVkRHlTGefEKK RAN2_LYCES 27 TTFVkRHlTG--EFE RAN2_LYCES 27 TTFVkRHlTGefEKK RANA_TOBAC 27 TTFVkRHlTG--EFE RANA_TOBAC 27 TTFVkRHlTGefEKK RANB_TOBAC 27 TTFVkRHlTG--EFE RANB_TOBAC 27 TTFVkRHlTGefEKK RAN_BRUMA 23 TTFVkRHlTGdfEKK RAN_CANFA 24 TTFVkRHlTG--EFE RAN_CANFA 24 TTFVkRHlTGefEKK RAN_CHICK 24 TTFVkRHlTG--EFE RAN_CHICK 24 TTFVkRHlTGefEKK Fitness without relation: 27.2889 Relation between 10 and 11 giving score 27.3835 Statistics: 27.2889 27.3835 T-T-F-V-x-R-H-x-T-G-x(0,2)-E-[FK]-[EKR],(10,11) F -> (E), K -> (K), : 27.383463 NR MATCHES 21 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (F,E)(F,E) POS 11 1234 56 78 901 GSP1_YEAST 26 TTFVkRHlTG--EFE GSP2_YEAST 27 TTFVkRHlTG--EFE RAN1_ARATH 27 TTFVkRHlTG--EFE RAN1_LYCES 27 TTFVkRHlTG--EFE RAN2_ARATH 9 TTFVkRHlTG--EFE RAN2_LYCES 27 TTFVkRHlTG--EFE RANA_TOBAC 27 TTFVkRHlTG--EFE RANB_TOBAC 27 TTFVkRHlTG--EFE RAN_CANFA 24 TTFVkRHlTG--EFE RAN_CHICK 24 TTFVkRHlTG--EFE (K,K)(K,K) POS 11 1234 56 78 901 GSP1_YEAST 26 TTFVkRHlTGefEKK GSP2_YEAST 27 TTFVkRHlTGefEKK RAN1_ARATH 27 TTFVkRHlTGefEKK RAN1_LYCES 27 TTFVkRHlTGefEKK RAN2_ARATH 9 TTFVkRHlTGefEKK RAN2_LYCES 27 TTFVkRHlTGefEKK RANA_TOBAC 27 TTFVkRHlTGefEKK RANB_TOBAC 27 TTFVkRHlTGefEKK RAN_BRUMA 23 TTFVkRHlTGdfEKK RAN_CANFA 24 TTFVkRHlTGefEKK RAN_CHICK 24 TTFVkRHlTGefEKK ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- RIBOSOMAL_L11.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID RIBOSOMAL_L11.pratt2 PA A-x(0,1)-P-x(1,3)-P-x-[GL]-[GLP] NR MATCHES 33 POS 1 2 3 45 RL11_BACSU 17 AnPap-PvGP RL11_BACSU 20 ApPvg-PaLG RL11_BACSU 20 A-PpvgPaLG RL11_CGDAB 17 AkPsp-PvGP RL11_ECOLI 17 AnPsp-PvGP RL11_HAEIN 17 AnPsp-PvGP RL11_HALCU 13 AdPg--PpLG RL11_HALCU 13 AdPgp-PlGP RL11_HALMA 13 AnPg--PpLG RL11_HALMA 13 AnPgp-PlGP RL11_HALVO 13 AnPg--PpLG RL11_HALVO 13 AnPgp-PlGP RL11_PROVU 17 AnPsp-PvGP RL11_SERMA 17 AnPsp-PvGP RL11_SPIOL 89 AtPap-PvGP RL11_SPIOL 92 ApPvg-PaLG RL11_SPIOL 92 A-PpvgPaLG RL11_STACA 17 AnPap-PvGP RL11_STACA 20 ApPvg-PaLG RL11_STACA 20 A-PpvgPaLG RL11_STRGR 21 AnPap-PvGP RL11_STRGR 24 ApPvg-PaLG RL11_STRGR 24 A-PpvgPaLG RL11_STRSQ 21 AnPap-PvGP RL11_STRSQ 24 ApPvg-PaLG RL11_STRSQ 24 A-PpvgPaLG RL11_STRVG 21 AnPap-PvGP RL11_STRVG 24 ApPvg-PaLG RL11_STRVG 24 A-PpvgPaLG RL11_SULSO 15 AkPg--PpLG RL11_SULSO 15 AkPgp-PlGP RL11_SYNY3 18 AnPap-PvGP RL11_SYNY3 21 ApPvg-PaLG Fitness without relation: 6.2151 Relation between 4 and 5 giving score 6.8505 Statistics: 6.2151 6.8505 A-x(0,1)-P-x(1,3)-P-x-[GL]-[GLP],(4,5) G -> (P), L -> (G), : 6.850506 NR MATCHES 33 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (G,P)(G,P) POS 1 2 3 45 RL11_BACSU 17 AnPap-PvGP RL11_CGDAB 17 AkPsp-PvGP RL11_ECOLI 17 AnPsp-PvGP RL11_HAEIN 17 AnPsp-PvGP RL11_HALCU 13 AdPgp-PlGP RL11_HALMA 13 AnPgp-PlGP RL11_HALVO 13 AnPgp-PlGP RL11_PROVU 17 AnPsp-PvGP RL11_SERMA 17 AnPsp-PvGP RL11_SPIOL 89 AtPap-PvGP RL11_STACA 17 AnPap-PvGP RL11_STRGR 21 AnPap-PvGP RL11_STRSQ 21 AnPap-PvGP RL11_STRVG 21 AnPap-PvGP RL11_SULSO 15 AkPgp-PlGP RL11_SYNY3 18 AnPap-PvGP (L,G)(L,G) POS 1 2 3 45 RL11_BACSU 20 ApPvg-PaLG RL11_BACSU 20 A-PpvgPaLG RL11_HALCU 13 AdPg--PpLG RL11_HALMA 13 AnPg--PpLG RL11_HALVO 13 AnPg--PpLG RL11_SPIOL 92 ApPvg-PaLG RL11_SPIOL 92 A-PpvgPaLG RL11_STACA 20 ApPvg-PaLG RL11_STACA 20 A-PpvgPaLG RL11_STRGR 24 ApPvg-PaLG RL11_STRGR 24 A-PpvgPaLG RL11_STRSQ 24 ApPvg-PaLG RL11_STRSQ 24 A-PpvgPaLG RL11_STRVG 24 ApPvg-PaLG RL11_STRVG 24 A-PpvgPaLG RL11_SULSO 15 AkPg--PpLG RL11_SYNY3 21 ApPvg-PaLG ----------------------------------------- ---------------------------------------------------- ---------------------------------------------------- TUBULIN_B_AUTOREG.pratt2.corr MDL_constant0=10.000000 MDL_constant1=10.000000 MDL_constant2=3.000000 MDL_constant3=10.000000 MDL_constant4=0.000000 c4=15.000000 ID TUBULIN_B_AUTOREG.pratt2 PA L-x(0,1)-V-x(0,1)-E-x-[QST]-[DQ]-[EQY] NR MATCHES 220 POS 1 2 3 456 TBB1_ANEPH 284 LtVpElTQQ TBB1_ANEPH 418 L-VsEyQQY TBB1_ARATH 285 LtVpElTQQ TBB1_ARATH 419 L-VsEyQQY TBB1_AVESA 222 LtVpElTQQ TBB1_AVESA 356 L-VsEyQQY TBB1_BRUPA 192 L-V-EnTDE TBB1_BRUPA 284 LnVaElTQQ TBB1_BRUPA 418 L-VsEyQQY TBB1_CHICK 192 L-V-EnTDE TBB1_CHICK 284 LtVpElTQQ TBB1_CHICK 418 L-VsEyQQY TBB1_COLGL 195 L-V-EnSDE TBB1_COLGL 285 LgVaElTQQ TBB1_COLGL 419 L-VsEyQQY TBB1_COLGR 192 L-V-EnSDE TBB1_COLGR 416 L-VsEyQQY TBB1_EMENI 192 L-V-EhSDE TBB1_EMENI 418 L-VsEyQQY TBB1_GEOCN 284 LtVpElTQQ TBB1_GEOCN 418 L-VsEyQQY TBB1_HUMAN 192 L-V-EnTDE TBB1_HUMAN 418 L-VsEyQQY TBB1_LUPAL 284 LtVpElTQQ TBB1_LUPAL 418 L-VsEyQQY TBB1_MAIZE 284 LtVpElTQQ TBB1_MAIZE 418 L-VsEyQQY TBB1_NOTCO 192 L-V-EnTDE TBB1_NOTCO 284 LtVpElTQQ TBB1_NOTCO 418 L-VsEyQQY TBB1_ORYSA 284 LtVpElTQQ TBB1_ORYSA 418 L-VaEyQQY TBB1_PARTE 284 LtVpElTQQ TBB1_PARTE 418 L-VsEyQQY TBB1_PHYPO 284 LtVpElTQQ TBB1_PHYPO 418 L-VsEyQQY TBB1_RAT 192 L-V-EnTDE TBB1_RAT 284 LtVpElTQQ TBB1_RAT 418 L-VsEyQQY TBB1_SOLTU 287 LtVpElTQQ TBB1_SOYBN 418 L-VaEyQQY TBB1_TRIVI 420 L-VsEyQQY TBB1_VOLCA 284 LtVpElTQQ TBB1_VOLCA 418 L-VsEyQQY TBB2_ANEPH 252 LtVpElTQQ TBB2_ANEPH 386 L-VsEyQQY TBB2_ARATH 284 LtVpElTQQ TBB2_ARATH 418 L-VsEyQQY TBB2_CAEEL 192 L-V-EnTDE TBB2_CAEEL 284 LtVpElTQQ TBB2_CAEEL 418 L-VsEyQQY TBB2_CHICK 192 L-V-EnTDE TBB2_CHICK 284 LtVpElTQQ TBB2_CHICK 418 L-VsEyQQY TBB2_COLGL 192 L-V-EnSDE TBB2_COLGL 418 L-VsEyQQY TBB2_COLGR 192 L-V-EnSDE TBB2_COLGR 418 L-VsEyQQY TBB2_DROHY 192 L-V-EnTDE TBB2_DROHY 284 LtVpElTQQ TBB2_DROHY 418 L-VsEyQQY TBB2_DROME 192 L-V-EnTDE TBB2_DROME 284 LtVpElTQQ TBB2_DROME 418 L-VsEyQQY TBB2_EMENI 192 L-V-EhSDE TBB2_ERYPI 192 L-V-EnSDE TBB2_ERYPI 418 L-VhEyQQY TBB2_GEOCN 286 LtVpElTQQ TBB2_HUMAN 192 L-V-EnTDE TBB2_HUMAN 284 LtVpElTQQ TBB2_HUMAN 418 L-VsEyQQY TBB2_MAIZE 284 LtVpElTQQ TBB2_MAIZE 418 L-VsEyQQY TBB2_ORYSA 284 LtVpElTQQ TBB2_ORYSA 418 L-VsEyQQY TBB2_PEA 282 LsVpEiTQQ TBB2_PEA 416 L-VsEyQQY TBB2_PHYPO 284 LtVpElTQQ TBB2_PHYPO 418 L-VsEyQQY TBB2_SOLTU 287 LtVpElTQQ TBB2_SOYBN 284 LsVpElTQQ TBB2_SOYBN 418 L-VsEyQQY TBB2_TRIVI 192 L-V-EnSDE TBB2_TRIVI 418 L-VsEyQQY TBB2_XENLA 192 L-V-EnTDE TBB2_XENLA 284 LtVpElTQQ TBB2_XENLA 418 L-VsEyQQY TBB3_ANEPH 80 LtVpElTQQ TBB3_ANEPH 214 L-VsEyQQY TBB3_CHICK 192 L-V-EnTDE TBB3_CHICK 418 L-VsEyQQY TBB3_DROME 198 L-V-EnTDE TBB3_DROME 290 LtVpElTQQ TBB3_DROME 424 L-VsEyQQY TBB3_ORYSA 284 LtVpElTQQ TBB3_ORYSA 418 L-VaEyQQY TBB3_PEA 275 LtVpElTQQ TBB3_PEA 409 L-VsEyQQY TBB3_SOYBN 289 LtVpElTQQ TBB4_ARATH 284 LsVpElTQQ TBB4_ARATH 418 L-VaEyQQY TBB4_CHICK 192 L-V-EnTDE TBB4_CHICK 284 LtVpElTQQ TBB4_CHICK 418 L-VsEyQQY TBB4_XENLA 192 L-V-EnTDE TBB4_XENLA 284 LtVpElTQQ TBB4_XENLA 418 L-VsEyQQY TBB5_ARATH 285 LtVpElTQQ TBB5_ARATH 419 L-VaEyQQY TBB5_CHICK 192 L-V-EnTDE TBB5_CHICK 284 LtVpElTQQ TBB5_CHICK 418 L-VsEyQQY TBB5_ECTVR 284 LtVpElTQQ TBB5_ECTVR 418 L-VsEyQQY TBB5_HUMAN 192 L-V-EnTDE TBB5_HUMAN 284 LtVpElTQQ TBB5_HUMAN 418 L-VsEyQQY TBB5_MOUSE 192 L-V-EnTDE TBB5_MOUSE 284 LtVpElTQQ TBB5_MOUSE 418 L-VsEyQQY TBB6_ARATH 284 LtVpElTQQ TBB6_ARATH 418 L-VsEyQQY TBB6_CHICK 284 LsVpElTQQ TBB6_CHICK 418 L-VsEyQQY TBB6_ECTVR 284 LtVpElTQQ TBB6_ECTVR 418 L-VsEyQQY TBB7_ARATH 284 LtVpElTQQ TBB7_ARATH 418 L-VsEyQQY TBB7_CAEEL 418 L-VsEyQQY TBB7_CHICK 192 L-V-EnTDE TBB7_CHICK 284 LtVpElTQQ TBB7_CHICK 418 L-VsEyQQY TBB8_ARATH 284 LtVpElTQQ TBB8_ARATH 418 L-VsEyQQY TBB9_ARATH 284 LsVpElTQQ TBB9_ARATH 418 L-VaEyQQY TBB_ACHKL 282 LtVpElTQQ TBB_ACHKL 416 L-VsEyQQY TBB_ACRCO 192 L-V-EnSDE TBB_ACRCO 418 L-VsEyQQY TBB_AJECA 193 L-V-EnSDE TBB_AJECA 419 L-VsEyQQY TBB_ASPFL 192 L-V-EhSDE TBB_ASPFL 418 L-VsEyQQY TBB_BABBO 284 LsVaElTQQ TBB_BABBO 418 L-VsEyQQY TBB_BOMMO 284 LtVpElTQQ TBB_CANAL 192 L-V-EnSDE TBB_CANAL 418 L-VsEyQQY TBB_CEPAC 192 L-V-EhSDE TBB_CEPAC 418 L-VsEyQQY TBB_CHLRE 284 LtVpElTQQ TBB_CHLRE 418 L-VsEyQQY TBB_DAUCA 10 L-VsEyQQY TBB_DICDI 423 L-VyEyQQY TBB_EPITY 192 L-V-EnSDE TBB_EPITY 418 L-VsEyQQY TBB_ERYGR 192 L-V-EnSDE TBB_ERYGR 418 L-VsEyQQY TBB_EUGGR 281 LtVpElTQQ TBB_EUGGR 415 L-VsEyQQY TBB_EUPCR 284 LtVpElTQQ TBB_EUPCR 418 L-VsEyQQY TBB_EUPOC 284 LtVpElTQQ TBB_EUPOC 418 L-VsEyQQY TBB_GIALA 418 L-VsEyQQY TBB_LEIME 192 L-V-EnSDE TBB_LEIME 420 L-VsEyQQY TBB_LYMST 80 L-VsEyQQY TBB_LYTPI 15 LtVsElTQQ TBB_LYTPI 149 L-VsEyQQY TBB_NAEGR 284 LtVpElTQQ TBB_NAEGR 418 L-VsEyQQY TBB_NEUCR 192 L-V-EnSDE TBB_NEUCR 418 L-VsEyQQY TBB_OCTDO 192 L-V-EnTDE TBB_OCTDO 418 L-VsEyQQY TBB_ONCGI 192 L-V-EnTDE TBB_ONCGI 418 L-VsEyQQY TBB_PARLI 192 L-V-EnTDE TBB_PARLI 284 LtVpElTQQ TBB_PARLI 418 L-VsEyQQY TBB_PIG 192 L-V-EnTDE TBB_PIG 284 LtVpElTQQ TBB_PIG 418 L-VsEyQQY TBB_PLAFA 284 LtVpElTQQ TBB_PLAFA 418 L-VsEyQQY TBB_PLAFK 284 LtVpElTQQ TBB_PLAFK 418 L-VsEyQQY TBB_PNECA 192 L-V-EnSDE TBB_PNECA 284 LtVpElTQQ TBB_PNECA 418 L-VsEyQQY TBB_POLAG 284 LtVpElTQQ TBB_POLAG 418 L-VsEyQQY TBB_SCHCO 192 L-V-EnSDE TBB_SCHCO 418 L-VaEyQQY TBB_SCHPO 192 L-V-EnSDE TBB_SCHPO 418 L-VsEyQQY TBB_SEPNO 192 L-V-EnSDE TBB_SEPNO 418 L-VsEyQQY TBB_STRPU 37 L-V-EnTDE TBB_STRPU 129 LtVpElTQQ TBB_STRPU 263 L-VsEyQQY TBB_STYLE 284 LtVpElTQQ TBB_STYLE 418 L-VsEyQQY TBB_TETPY 284 LtVpElTQQ TBB_TETPY 418 L-VsEyQQY TBB_TETTH 284 LtVpElTQQ TBB_TETTH 418 L-VsEyQQY TBB_TOXGO 284 LsVpElTQQ TBB_TOXGO 418 L-VsEyQQY TBB_TRYBR 192 L-V-EnSDE TBB_TRYBR 284 LsVpElTQQ TBB_TRYBR 418 L-VsEyQQY TBB_TRYCR 82 LsVpElTQQ TBB_VENIN 192 L-V-EnSDE TBB_VENIN 418 L-VsEyQQY TBB_YEAST 192 L-V-EhSDE TBB_YEAST 284 LtVpElTQQ TBB_YEAST 418 L-VsEyQQY Fitness without relation: 10.5700 Relation between 4 and 6 giving score 11.5044 Statistics: 10.5700 11.5044 L-x(0,1)-V-x(0,1)-E-x-[QST]-[DQ]-[EQY],(4,6) Q -> (Y), S -> (E), T -> (EQ), : 11.504379 NR MATCHES 220 THE SEQUENCES MATCHING THE DIFFERENT PAIRS: (Q,Y)(Q,Y) POS 1 2 3 456 TBB1_ANEPH 418 L-VsEyQQY TBB1_ARATH 419 L-VsEyQQY TBB1_AVESA 356 L-VsEyQQY TBB1_BRUPA 418 L-VsEyQQY TBB1_CHICK 418 L-VsEyQQY TBB1_COLGL 419 L-VsEyQQY TBB1_COLGR 416 L-VsEyQQY TBB1_EMENI 418 L-VsEyQQY TBB1_GEOCN 418 L-VsEyQQY TBB1_HUMAN 418 L-VsEyQQY TBB1_LUPAL 418 L-VsEyQQY TBB1_MAIZE 418 L-VsEyQQY TBB1_NOTCO 418 L-VsEyQQY TBB1_ORYSA 418 L-VaEyQQY TBB1_PARTE 418 L-VsEyQQY TBB1_PHYPO 418 L-VsEyQQY TBB1_RAT 418 L-VsEyQQY TBB1_SOYBN 418 L-VaEyQQY TBB1_TRIVI 420 L-VsEyQQY TBB1_VOLCA 418 L-VsEyQQY TBB2_ANEPH 386 L-VsEyQQY TBB2_ARATH 418 L-VsEyQQY TBB2_CAEEL 418 L-VsEyQQY TBB2_CHICK 418 L-VsEyQQY TBB2_COLGL 418 L-VsEyQQY TBB2_COLGR 418 L-VsEyQQY TBB2_DROHY 418 L-VsEyQQY TBB2_DROME 418 L-VsEyQQY TBB2_ERYPI 418 L-VhEyQQY TBB2_HUMAN 418 L-VsEyQQY TBB2_MAIZE 418 L-VsEyQQY TBB2_ORYSA 418 L-VsEyQQY TBB2_PEA 416 L-VsEyQQY TBB2_PHYPO 418 L-VsEyQQY TBB2_SOYBN 418 L-VsEyQQY TBB2_TRIVI 418 L-VsEyQQY TBB2_XENLA 418 L-VsEyQQY TBB3_ANEPH 214 L-VsEyQQY TBB3_CHICK 418 L-VsEyQQY TBB3_DROME 424 L-VsEyQQY TBB3_ORYSA 418 L-VaEyQQY TBB3_PEA 409 L-VsEyQQY TBB4_ARATH 418 L-VaEyQQY TBB4_CHICK 418 L-VsEyQQY TBB4_XENLA 418 L-VsEyQQY TBB5_ARATH 419 L-VaEyQQY TBB5_CHICK 418 L-VsEyQQY TBB5_ECTVR 418 L-VsEyQQY TBB5_HUMAN 418 L-VsEyQQY TBB5_MOUSE 418 L-VsEyQQY TBB6_ARATH 418 L-VsEyQQY TBB6_CHICK 418 L-VsEyQQY TBB6_ECTVR 418 L-VsEyQQY TBB7_ARATH 418 L-VsEyQQY TBB7_CAEEL 418 L-VsEyQQY TBB7_CHICK 418 L-VsEyQQY TBB8_ARATH 418 L-VsEyQQY TBB9_ARATH 418 L-VaEyQQY TBB_ACHKL 416 L-VsEyQQY TBB_ACRCO 418 L-VsEyQQY TBB_AJECA 419 L-VsEyQQY TBB_ASPFL 418 L-VsEyQQY TBB_BABBO 418 L-VsEyQQY TBB_CANAL 418 L-VsEyQQY TBB_CEPAC 418 L-VsEyQQY TBB_CHLRE 418 L-VsEyQQY TBB_DAUCA 10 L-VsEyQQY TBB_DICDI 423 L-VyEyQQY TBB_EPITY 418 L-VsEyQQY TBB_ERYGR 418 L-VsEyQQY TBB_EUGGR 415 L-VsEyQQY TBB_EUPCR 418 L-VsEyQQY TBB_EUPOC 418 L-VsEyQQY TBB_GIALA 418 L-VsEyQQY TBB_LEIME 420 L-VsEyQQY TBB_LYMST 80 L-VsEyQQY TBB_LYTPI 149 L-VsEyQQY TBB_NAEGR 418 L-VsEyQQY TBB_NEUCR 418 L-VsEyQQY TBB_OCTDO 418 L-VsEyQQY TBB_ONCGI 418 L-VsEyQQY TBB_PARLI 418 L-VsEyQQY TBB_PIG 418 L-VsEyQQY TBB_PLAFA 418 L-VsEyQQY TBB_PLAFK 418 L-VsEyQQY TBB_PNECA 418 L-VsEyQQY TBB_POLAG 418 L-VsEyQQY TBB_SCHCO 418 L-VaEyQQY TBB_SCHPO 418 L-VsEyQQY TBB_SEPNO 418 L-VsEyQQY TBB_STRPU 263 L-VsEyQQY TBB_STYLE 418 L-VsEyQQY TBB_TETPY 418 L-VsEyQQY TBB_TETTH 418 L-VsEyQQY TBB_TOXGO 418 L-VsEyQQY TBB_TRYBR 418 L-VsEyQQY TBB_VENIN 418 L-VsEyQQY TBB_YEAST 418 L-VsEyQQY (S,E)(S,E) POS 1 2 3 456 TBB1_COLGL 195 L-V-EnSDE TBB1_COLGR 192 L-V-EnSDE TBB1_EMENI 192 L-V-EhSDE TBB2_COLGL 192 L-V-EnSDE TBB2_COLGR 192 L-V-EnSDE TBB2_EMENI 192 L-V-EhSDE TBB2_ERYPI 192 L-V-EnSDE TBB2_TRIVI 192 L-V-EnSDE TBB_ACRCO 192 L-V-EnSDE TBB_AJECA 193 L-V-EnSDE TBB_ASPFL 192 L-V-EhSDE TBB_CANAL 192 L-V-EnSDE TBB_CEPAC 192 L-V-EhSDE TBB_EPITY 192 L-V-EnSDE TBB_ERYGR 192 L-V-EnSDE TBB_LEIME 192 L-V-EnSDE TBB_NEUCR 192 L-V-EnSDE TBB_PNECA 192 L-V-EnSDE TBB_SCHCO 192 L-V-EnSDE TBB_SCHPO 192 L-V-EnSDE TBB_SEPNO 192 L-V-EnSDE TBB_TRYBR 192 L-V-EnSDE TBB_VENIN 192 L-V-EnSDE TBB_YEAST 192 L-V-EhSDE (T,E)(T,E) POS 1 2 3 456 TBB1_BRUPA 192 L-V-EnTDE TBB1_CHICK 192 L-V-EnTDE TBB1_HUMAN 192 L-V-EnTDE TBB1_NOTCO 192 L-V-EnTDE TBB1_RAT 192 L-V-EnTDE TBB2_CAEEL 192 L-V-EnTDE TBB2_CHICK 192 L-V-EnTDE TBB2_DROHY 192 L-V-EnTDE TBB2_DROME 192 L-V-EnTDE TBB2_HUMAN 192 L-V-EnTDE TBB2_XENLA 192 L-V-EnTDE TBB3_CHICK 192 L-V-EnTDE TBB3_DROME 198 L-V-EnTDE TBB4_CHICK 192 L-V-EnTDE TBB4_XENLA 192 L-V-EnTDE TBB5_CHICK 192 L-V-EnTDE TBB5_HUMAN 192 L-V-EnTDE TBB5_MOUSE 192 L-V-EnTDE TBB7_CHICK 192 L-V-EnTDE TBB_OCTDO 192 L-V-EnTDE TBB_ONCGI 192 L-V-EnTDE TBB_PARLI 192 L-V-EnTDE TBB_PIG 192 L-V-EnTDE TBB_STRPU 37 L-V-EnTDE (T,Q)(T,Q) POS 1 2 3 456 TBB1_ANEPH 284 LtVpElTQQ TBB1_ARATH 285 LtVpElTQQ TBB1_AVESA 222 LtVpElTQQ TBB1_BRUPA 284 LnVaElTQQ TBB1_CHICK 284 LtVpElTQQ TBB1_COLGL 285 LgVaElTQQ TBB1_GEOCN 284 LtVpElTQQ TBB1_LUPAL 284 LtVpElTQQ TBB1_MAIZE 284 LtVpElTQQ TBB1_NOTCO 284 LtVpElTQQ TBB1_ORYSA 284 LtVpElTQQ TBB1_PARTE 284 LtVpElTQQ TBB1_PHYPO 284 LtVpElTQQ TBB1_RAT 284 LtVpElTQQ TBB1_SOLTU 287 LtVpElTQQ TBB1_VOLCA 284 LtVpElTQQ TBB2_ANEPH 252 LtVpElTQQ TBB2_ARATH 284 LtVpElTQQ TBB2_CAEEL 284 LtVpElTQQ TBB2_CHICK 284 LtVpElTQQ TBB2_DROHY 284 LtVpElTQQ TBB2_DROME 284 LtVpElTQQ TBB2_GEOCN 286 LtVpElTQQ TBB2_HUMAN 284 LtVpElTQQ TBB2_MAIZE 284 LtVpElTQQ TBB2_ORYSA 284 LtVpElTQQ TBB2_PEA 282 LsVpEiTQQ TBB2_PHYPO 284 LtVpElTQQ TBB2_SOLTU 287 LtVpElTQQ TBB2_SOYBN 284 LsVpElTQQ TBB2_XENLA 284 LtVpElTQQ TBB3_ANEPH 80 LtVpElTQQ TBB3_DROME 290 LtVpElTQQ TBB3_ORYSA 284 LtVpElTQQ TBB3_PEA 275 LtVpElTQQ TBB3_SOYBN 289 LtVpElTQQ TBB4_ARATH 284 LsVpElTQQ TBB4_CHICK 284 LtVpElTQQ TBB4_XENLA 284 LtVpElTQQ TBB5_ARATH 285 LtVpElTQQ TBB5_CHICK 284 LtVpElTQQ TBB5_ECTVR 284 LtVpElTQQ TBB5_HUMAN 284 LtVpElTQQ TBB5_MOUSE 284 LtVpElTQQ TBB6_ARATH 284 LtVpElTQQ TBB6_CHICK 284 LsVpElTQQ TBB6_ECTVR 284 LtVpElTQQ TBB7_ARATH 284 LtVpElTQQ TBB7_CHICK 284 LtVpElTQQ TBB8_ARATH 284 LtVpElTQQ TBB9_ARATH 284 LsVpElTQQ TBB_ACHKL 282 LtVpElTQQ TBB_BABBO 284 LsVaElTQQ TBB_BOMMO 284 LtVpElTQQ TBB_CHLRE 284 LtVpElTQQ TBB_EUGGR 281 LtVpElTQQ TBB_EUPCR 284 LtVpElTQQ TBB_EUPOC 284 LtVpElTQQ TBB_LYTPI 15 LtVsElTQQ TBB_NAEGR 284 LtVpElTQQ TBB_PARLI 284 LtVpElTQQ TBB_PIG 284 LtVpElTQQ TBB_PLAFA 284 LtVpElTQQ TBB_PLAFK 284 LtVpElTQQ TBB_PNECA 284 LtVpElTQQ TBB_POLAG 284 LtVpElTQQ TBB_STRPU 129 LtVpElTQQ TBB_STYLE 284 LtVpElTQQ TBB_TETPY 284 LtVpElTQQ TBB_TETTH 284 LtVpElTQQ TBB_TOXGO 284 LsVpElTQQ TBB_TRYBR 284 LsVpElTQQ TBB_TRYCR 82 LsVpElTQQ TBB_YEAST 284 LtVpElTQQ ----------------------------------------- ----------------------------------------------------