------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 24 sequences from file TYROSINASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 24 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename TYROSINASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: HCY_OCTDO 1233 PPOA_LYCES 630 PPOB_LYCES 596 PPOB_SOLTU 588 PPOC_LYCES 626 PPOD_LYCES 591 PPOE_LYCES 587 PPOF_LYCES 585 PPO_MALDO 593 PPO_SPIOL 639 PPO_VICFA 606 PPO_VITVI 607 TYR1_HUMAN 527 TYR1_MOUSE 537 TYR2_HUMAN 519 TYR2_MOUSE 517 TYRO_HUMAN 529 TYRO_MOUSE 533 TYRO_NEUCR 620 TYRO_RANNI 532 TYRO_RHIME 494 TYRO_STRAT 272 TYRO_STRGA 273 YKH1_CAEEL 484 Pratt run started at Thu Feb 6 21:30:18 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 24.0203 26( 24) D-P-x-F-x(2,3)-H-x(3,4)-D-x(5)-W 2: 20.8503 26( 24) P-x-F-x(3)-H-x(3)-D-x(5)-W 3: 16.6802 26( 24) F-x(3)-H-x(3)-D-x(5)-W 4: 16.6802 26( 24) H-x(4)-F-x(3)-H-R 5: 15.6802 31( 24) F-x(2,3)-H-x(3,4)-D-x(5)-W 6: 14.6802 30( 24) S-x(3,5)-P-x-F-x(2,4)-H 7: 12.5102 26( 24) H-x(3)-D-x(5)-W 8: 12.5102 26( 24) F-x(3)-H-R 9: 12.0102 48( 24) H-x(3,4)-D-x(5)-W 10: 12.0102 31( 24) P-x-F-x(1,2)-L 11: 12.0102 33( 24) S-x(2,3)-D-P 12: 12.0102 37( 24) D-x(1,2)-F-x(3)-H 13: 11.5102 27( 24) H-x(0,1)-R-x(1,2)-Y 14: 11.5102 32( 24) D-x(0,2)-P-x(5)-H 15: 11.5102 40( 24) F-x(2,3)-H-x(1,2)-Y 16: 11.5102 32( 24) F-x(2,3)-H-x(4,5)-R 17: 11.5102 40( 24) D-x(1,2)-F-x(2,3)-H 18: 11.5102 44( 24) D-x(2,4)-L-x(5)-D 19: 11.5102 55( 24) D-x(0,1)-P-x(0,1)-F 20: 11.5102 41( 24) P-x-F-x(0,2)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 35.1535 26( 24) D-P-[ILV]-F-x(3)-H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W B 2: 32.5078 26( 24) D-P-[ILV]-F-x(2,3)-H-x(3,4)-D-x-[ILMV]-[FW]-x(2)-W C 3: 29.7136 25( 24) H-x(4)-F-x(2)-[FW]-H-R-x-[FHY]-[LMV]-x(3)-E D 4: 28.3216 26( 24) P-x-F-x(3)-H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W E 5: 27.6112 26( 24) D-x(1,2)-F-x(3)-H-[ACGNSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W F 6: 25.5435 25( 24) F-x(2)-[FW]-H-R-x-[FHY]-[LMV]-x(3)-E G 7: 24.1515 26( 24) F-x(3)-H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W H 8: 21.5059 31( 24) F-x(2,3)-H-x(3,4)-D-x-[ILMV]-[FW]-x(2)-W I 9: 19.9815 26( 24) H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W J 10: 19.9719 25( 24) S-x(3,5)-P-[ILV]-F-x(2,4)-H-x(3)-[ADV] K 11: 17.8358 48( 24) H-x(3,4)-D-x-[ILMV]-[FW]-x(2)-W L 12: 13.7342 32( 24) D-x(1,2)-F-x(2,3)-H-x(2)-[GNTV] M 13: 13.7131 36( 24) D-x(0,1)-P-x(0,1)-F-x-[ALPV] N 14: 12.0102 31( 24) P-x-F-x(1,2)-L O 15: 12.0102 33( 24) S-x(2,3)-D-P P 16: 11.5102 27( 24) H-x(0,1)-R-x(1,2)-Y Q 17: 11.5102 40( 24) F-x(2,3)-H-x(1,2)-Y R 18: 11.5102 32( 24) F-x(2,3)-H-x(4,5)-R S 19: 11.5102 40( 24) D-x(1,2)-F-x(2,3)-H T 20: 11.5102 44( 24) D-x(2,4)-L-x(5)-D Best patterns with alignements: fitness hits(seqs) Pattern A 1: 35.1535 26( 24) D-P-[ILV]-F-x(3)-H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 26(24) HCY_OCTDO : 210- 227: hyaay DPIFylhHSnvDrLWviW qelqk HCY_OCTDO : 623- 640: vyssf DPIFyvhHSmvDrLWaiW qalqe HCY_OCTDO : 1032- 1049: hytsy DPLFylhHSntDrIWsvW qalqk PPOA_LYCES : 363- 380: ysagl DPLFychHSnvDrMWneW katgg PPOB_LYCES : 364- 381: ysagl DPVFychHGnvDrMWneW kaigg PPOB_SOLTU : 357- 374: ysagl DPIFychHAnvDrMWdeW kligg PPOC_LYCES : 359- 376: ysagl DPLFychHSnvDrMWneW katgg PPOD_LYCES : 359- 376: ysagl DPVFfchHSnvDrMWseW katgg PPOE_LYCES : 356- 373: ysagl DPIFychHAnvDrMWneW kligg PPOF_LYCES : 354- 371: ysagl DPLFychHAnvDrMWneW kligg PPO_MALDO : 354- 371: ysagr DPIFfahHSnvDrMWsiW ktlgg PPO_SPIOL : 381- 398: wsagr DPLFychHSnvDrMWslW tdvlh PPO_VICFA : 360- 377: ysaar DPIFyshHSnvDrLWyiW ktlgg PPO_VITVI : 368- 385: ytagr DPIFfghHAnvDrMWniW ktigg TYR1_HUMAN : 397- 414: hlspn DPIFvllHTftDaVFdeW lrryn TYR1_MOUSE : 397- 414: hlspn DPIFvllHTftDaVFdeW lrryn TYR2_HUMAN : 389- 406: hsaan DPIFvvlHSftDaIFdeW mkrfn TYR2_MOUSE : 389- 406: hsaan DPVFvvlHSftDaIFdeW lkrnn TYRO_HUMAN : 383- 400: qgsan DPIFllhHAfvDsIFeqW lrrhr TYRO_MOUSE : 383- 400: qgsan DPIFllhHAfvDsIFeqW lrrhr TYRO_NEUCR : 299- 316: evsaf DPLFwlhHVnvDrLWsiW qdlnp TYRO_RANNI : 387- 404: qgsan DPIFvlhHAfvDsLFeqW lrrhq TYRO_RHIME : 249- 266: nlspl DPIFflhHCniDrLWdvW trkqq TYRO_STRAT : 208- 225: gvspn DPVFwlhHAyiDkLWaeW qrrhp TYRO_STRGA : 208- 225: gmspn DPVFwlhHAyvDkLWaeW qrrhp YKH1_CAEEL : 192- 209: stsan DPVFflhHTfvDfIWemW rqnhq B 2: 32.5078 26( 24) D-P-[ILV]-F-x(2,3)-H-x(3,4)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 26(24) HCY_OCTDO : 210- 227: hyaay DPIFylhHsnv-DrLWviW qelqk HCY_OCTDO : 210- 227: hyaay DPIFyl-HhsnvDrLWviW qelqk HCY_OCTDO : 623- 640: vyssf DPIFyvhHsmv-DrLWaiW qalqe HCY_OCTDO : 623- 640: vyssf DPIFyv-HhsmvDrLWaiW qalqe HCY_OCTDO : 1032- 1049: hytsy DPLFylhHsnt-DrIWsvW qalqk HCY_OCTDO : 1032- 1049: hytsy DPLFyl-HhsntDrIWsvW qalqk PPOA_LYCES : 363- 380: ysagl DPLFychHsnv-DrMWneW katgg PPOA_LYCES : 363- 380: ysagl DPLFyc-HhsnvDrMWneW katgg PPOB_LYCES : 364- 381: ysagl DPVFychHgnv-DrMWneW kaigg PPOB_LYCES : 364- 381: ysagl DPVFyc-HhgnvDrMWneW kaigg PPOB_SOLTU : 357- 374: ysagl DPIFychHanv-DrMWdeW kligg PPOB_SOLTU : 357- 374: ysagl DPIFyc-HhanvDrMWdeW kligg PPOC_LYCES : 359- 376: ysagl DPLFychHsnv-DrMWneW katgg PPOC_LYCES : 359- 376: ysagl DPLFyc-HhsnvDrMWneW katgg PPOD_LYCES : 359- 376: ysagl DPVFfchHsnv-DrMWseW katgg PPOD_LYCES : 359- 376: ysagl DPVFfc-HhsnvDrMWseW katgg PPOE_LYCES : 356- 373: ysagl DPIFychHanv-DrMWneW kligg PPOE_LYCES : 356- 373: ysagl DPIFyc-HhanvDrMWneW kligg PPOF_LYCES : 354- 371: ysagl DPLFychHanv-DrMWneW kligg PPOF_LYCES : 354- 371: ysagl DPLFyc-HhanvDrMWneW kligg PPO_MALDO : 354- 371: ysagr DPIFfahHsnv-DrMWsiW ktlgg PPO_MALDO : 354- 371: ysagr DPIFfa-HhsnvDrMWsiW ktlgg PPO_SPIOL : 381- 398: wsagr DPLFychHsnv-DrMWslW tdvlh PPO_SPIOL : 381- 398: wsagr DPLFyc-HhsnvDrMWslW tdvlh PPO_VICFA : 360- 377: ysaar DPIFyshHsnv-DrLWyiW ktlgg PPO_VICFA : 360- 377: ysaar DPIFys-HhsnvDrLWyiW ktlgg PPO_VITVI : 368- 385: ytagr DPIFfghHanv-DrMWniW ktigg PPO_VITVI : 368- 385: ytagr DPIFfg-HhanvDrMWniW ktigg TYR1_HUMAN : 397- 414: hlspn DPIFvllHtft-DaVFdeW lrryn TYR1_MOUSE : 397- 414: hlspn DPIFvllHtft-DaVFdeW lrryn TYR2_HUMAN : 389- 406: hsaan DPIFvvlHsft-DaIFdeW mkrfn TYR2_MOUSE : 389- 406: hsaan DPVFvvlHsft-DaIFdeW lkrnn TYRO_HUMAN : 383- 400: qgsan DPIFllhHafv-DsIFeqW lrrhr TYRO_HUMAN : 383- 400: qgsan DPIFll-HhafvDsIFeqW lrrhr TYRO_MOUSE : 383- 400: qgsan DPIFllhHafv-DsIFeqW lrrhr TYRO_MOUSE : 383- 400: qgsan DPIFll-HhafvDsIFeqW lrrhr TYRO_NEUCR : 299- 316: evsaf DPLFwlhHvnv-DrLWsiW qdlnp TYRO_NEUCR : 299- 316: evsaf DPLFwl-HhvnvDrLWsiW qdlnp TYRO_RANNI : 387- 404: qgsan DPIFvlhHafv-DsLFeqW lrrhq TYRO_RANNI : 387- 404: qgsan DPIFvl-HhafvDsLFeqW lrrhq TYRO_RHIME : 249- 266: nlspl DPIFflhHcni-DrLWdvW trkqq TYRO_RHIME : 249- 266: nlspl DPIFfl-HhcniDrLWdvW trkqq TYRO_STRAT : 208- 225: gvspn DPVFwlhHayi-DkLWaeW qrrhp TYRO_STRAT : 208- 225: gvspn DPVFwl-HhayiDkLWaeW qrrhp TYRO_STRGA : 208- 225: gmspn DPVFwlhHayv-DkLWaeW qrrhp TYRO_STRGA : 208- 225: gmspn DPVFwl-HhayvDkLWaeW qrrhp YKH1_CAEEL : 192- 209: stsan DPVFflhHtfv-DfIWemW rqnhq YKH1_CAEEL : 192- 209: stsan DPVFfl-HhtfvDfIWemW rqnhq C 3: 29.7136 25( 24) H-x(4)-F-x(2)-[FW]-H-R-x-[FHY]-[LMV]-x(3)-E Occurences: 25(24) HCY_OCTDO : 65- 82: haccl HgmatFphWHRlYVvqfE qalhr HCY_OCTDO : 481- 498: yaccl HgmpvFphWHRvYLlhfE dsmrr PPOA_LYCES : 198- 215: kvlqv HnswlFfpFHRwYLyfyE rilgs PPOB_LYCES : 199- 216: kelqv HnswlFfpFHRwYLyfyE rilgk PPOB_SOLTU : 198- 215: kelqv HfswlFfpFHRwYLyfyE rilgs PPOC_LYCES : 194- 211: kvlqv HnswlFfpFHRwYLyfyE rilgs PPOD_LYCES : 194- 211: kelqv HnswlFfpFHRwYLyfyE snagk PPOE_LYCES : 197- 214: kelqv HfswlFfpFHRwYLyfyE rilgs PPOF_LYCES : 197- 214: kelqv HfswlFfpFHRwYLyfyE rilgs PPO_MALDO : 196- 213: lelqi HnswlFfpFHRyYLyffE kilgk PPO_SPIOL : 214- 231: trlev HaswlFpsFHRwYLyfyE rilgk PPO_VICFA : 202- 219: lklqv HgswlFfpFHRwYLyfyE rilgs PPO_VITVI : 211- 228: lelqv HaswlFlpFHRyYLyfnE rilak TYR1_HUMAN : 215- 232: evdfs HegpaFltWHRyHLlrlE kdmqe TYR1_MOUSE : 215- 232: dvdfs HegpaFltWHRyHLlqlE rdmqe TYR2_HUMAN : 211- 228: aidfs HqgpaFvtWHRyHLlclE rdlqr TYR2_MOUSE : 211- 228: aidfs HqgpaFvtWHRyHLlwlE relqr TYRO_HUMAN : 202- 219: didfa HeapaFlpWHRlFLlrwE qeiqk TYRO_MOUSE : 202- 219: didfa HeapgFlpWHRlFLllwE qeire TYRO_NEUCR : 96- 113: ggyct HssilFitWHRpYLalyE qalya TYRO_RANNI : 206- 223: didfa HeapgFlpWHRfYLllwE reiqk TYRO_RHIME : 44- 61: lmdcp HgdwwFtsWHRgYLgyfE etcre TYRO_STRAT : 53- 70: gertg HrspsFlpWHRrFLlefE ralqs TYRO_STRGA : 53- 70: gertg HrspsFlpWHRrYLlefE ralqs YKH1_CAEEL : 41- 58: lssga HsgpgFlvWHReYMkrmE ialrm D 4: 28.3216 26( 24) P-x-F-x(3)-H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 26(24) HCY_OCTDO : 211- 227: yaayd PiFylhHSnvDrLWviW qelqk HCY_OCTDO : 624- 640: yssfd PiFyvhHSmvDrLWaiW qalqe HCY_OCTDO : 1033- 1049: ytsyd PlFylhHSntDrIWsvW qalqk PPOA_LYCES : 364- 380: sagld PlFychHSnvDrMWneW katgg PPOB_LYCES : 365- 381: sagld PvFychHGnvDrMWneW kaigg PPOB_SOLTU : 358- 374: sagld PiFychHAnvDrMWdeW kligg PPOC_LYCES : 360- 376: sagld PlFychHSnvDrMWneW katgg PPOD_LYCES : 360- 376: sagld PvFfchHSnvDrMWseW katgg PPOE_LYCES : 357- 373: sagld PiFychHAnvDrMWneW kligg PPOF_LYCES : 355- 371: sagld PlFychHAnvDrMWneW kligg PPO_MALDO : 355- 371: sagrd PiFfahHSnvDrMWsiW ktlgg PPO_SPIOL : 382- 398: sagrd PlFychHSnvDrMWslW tdvlh PPO_VICFA : 361- 377: saard PiFyshHSnvDrLWyiW ktlgg PPO_VITVI : 369- 385: tagrd PiFfghHAnvDrMWniW ktigg TYR1_HUMAN : 398- 414: lspnd PiFvllHTftDaVFdeW lrryn TYR1_MOUSE : 398- 414: lspnd PiFvllHTftDaVFdeW lrryn TYR2_HUMAN : 390- 406: saand PiFvvlHSftDaIFdeW mkrfn TYR2_MOUSE : 390- 406: saand PvFvvlHSftDaIFdeW lkrnn TYRO_HUMAN : 384- 400: gsand PiFllhHAfvDsIFeqW lrrhr TYRO_MOUSE : 384- 400: gsand PiFllhHAfvDsIFeqW lrrhr TYRO_NEUCR : 300- 316: vsafd PlFwlhHVnvDrLWsiW qdlnp TYRO_RANNI : 388- 404: gsand PiFvlhHAfvDsLFeqW lrrhq TYRO_RHIME : 250- 266: lspld PiFflhHCniDrLWdvW trkqq TYRO_STRAT : 209- 225: vspnd PvFwlhHAyiDkLWaeW qrrhp TYRO_STRGA : 209- 225: mspnd PvFwlhHAyvDkLWaeW qrrhp YKH1_CAEEL : 193- 209: tsand PvFflhHTfvDfIWemW rqnhq E 5: 27.6112 26( 24) D-x(1,2)-F-x(3)-H-[ACGNSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 26(24) HCY_OCTDO : 210- 227: hyaay DpiFylhHSnvDrLWviW qelqk HCY_OCTDO : 623- 640: vyssf DpiFyvhHSmvDrLWaiW qalqe HCY_OCTDO : 1032- 1049: hytsy DplFylhHSntDrIWsvW qalqk PPOA_LYCES : 363- 380: ysagl DplFychHSnvDrMWneW katgg PPOB_LYCES : 364- 381: ysagl DpvFychHGnvDrMWneW kaigg PPOB_SOLTU : 357- 374: ysagl DpiFychHAnvDrMWdeW kligg PPOC_LYCES : 359- 376: ysagl DplFychHSnvDrMWneW katgg PPOD_LYCES : 359- 376: ysagl DpvFfchHSnvDrMWseW katgg PPOE_LYCES : 356- 373: ysagl DpiFychHAnvDrMWneW kligg PPOF_LYCES : 354- 371: ysagl DplFychHAnvDrMWneW kligg PPO_MALDO : 354- 371: ysagr DpiFfahHSnvDrMWsiW ktlgg PPO_SPIOL : 381- 398: wsagr DplFychHSnvDrMWslW tdvlh PPO_VICFA : 360- 377: ysaar DpiFyshHSnvDrLWyiW ktlgg PPO_VITVI : 368- 385: ytagr DpiFfghHAnvDrMWniW ktigg TYR1_HUMAN : 397- 414: hlspn DpiFvllHTftDaVFdeW lrryn TYR1_MOUSE : 397- 414: hlspn DpiFvllHTftDaVFdeW lrryn TYR2_HUMAN : 389- 406: hsaan DpiFvvlHSftDaIFdeW mkrfn TYR2_MOUSE : 389- 406: hsaan DpvFvvlHSftDaIFdeW lkrnn TYRO_HUMAN : 383- 400: qgsan DpiFllhHAfvDsIFeqW lrrhr TYRO_MOUSE : 383- 400: qgsan DpiFllhHAfvDsIFeqW lrrhr TYRO_NEUCR : 299- 316: evsaf DplFwlhHVnvDrLWsiW qdlnp TYRO_RANNI : 387- 404: qgsan DpiFvlhHAfvDsLFeqW lrrhq TYRO_RHIME : 249- 266: nlspl DpiFflhHCniDrLWdvW trkqq TYRO_STRAT : 208- 225: gvspn DpvFwlhHAyiDkLWaeW qrrhp TYRO_STRGA : 208- 225: gmspn DpvFwlhHAyvDkLWaeW qrrhp YKH1_CAEEL : 192- 209: stsan DpvFflhHTfvDfIWemW rqnhq F 6: 25.5435 25( 24) F-x(2)-[FW]-H-R-x-[FHY]-[LMV]-x(3)-E Occurences: 25(24) HCY_OCTDO : 70- 82: hgmat FphWHRlYVvqfE qalhr HCY_OCTDO : 486- 498: hgmpv FphWHRvYLlhfE dsmrr PPOA_LYCES : 203- 215: hnswl FfpFHRwYLyfyE rilgs PPOB_LYCES : 204- 216: hnswl FfpFHRwYLyfyE rilgk PPOB_SOLTU : 203- 215: hfswl FfpFHRwYLyfyE rilgs PPOC_LYCES : 199- 211: hnswl FfpFHRwYLyfyE rilgs PPOD_LYCES : 199- 211: hnswl FfpFHRwYLyfyE snagk PPOE_LYCES : 202- 214: hfswl FfpFHRwYLyfyE rilgs PPOF_LYCES : 202- 214: hfswl FfpFHRwYLyfyE rilgs PPO_MALDO : 201- 213: hnswl FfpFHRyYLyffE kilgk PPO_SPIOL : 219- 231: haswl FpsFHRwYLyfyE rilgk PPO_VICFA : 207- 219: hgswl FfpFHRwYLyfyE rilgs PPO_VITVI : 216- 228: haswl FlpFHRyYLyfnE rilak TYR1_HUMAN : 220- 232: hegpa FltWHRyHLlrlE kdmqe TYR1_MOUSE : 220- 232: hegpa FltWHRyHLlqlE rdmqe TYR2_HUMAN : 216- 228: hqgpa FvtWHRyHLlclE rdlqr TYR2_MOUSE : 216- 228: hqgpa FvtWHRyHLlwlE relqr TYRO_HUMAN : 207- 219: heapa FlpWHRlFLlrwE qeiqk TYRO_MOUSE : 207- 219: heapg FlpWHRlFLllwE qeire TYRO_NEUCR : 101- 113: hssil FitWHRpYLalyE qalya TYRO_RANNI : 211- 223: heapg FlpWHRfYLllwE reiqk TYRO_RHIME : 49- 61: hgdww FtsWHRgYLgyfE etcre TYRO_STRAT : 58- 70: hrsps FlpWHRrFLlefE ralqs TYRO_STRGA : 58- 70: hrsps FlpWHRrYLlefE ralqs YKH1_CAEEL : 46- 58: hsgpg FlvWHReYMkrmE ialrm G 7: 24.1515 26( 24) F-x(3)-H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 26(24) HCY_OCTDO : 213- 227: aydpi FylhHSnvDrLWviW qelqk HCY_OCTDO : 626- 640: sfdpi FyvhHSmvDrLWaiW qalqe HCY_OCTDO : 1035- 1049: sydpl FylhHSntDrIWsvW qalqk PPOA_LYCES : 366- 380: gldpl FychHSnvDrMWneW katgg PPOB_LYCES : 367- 381: gldpv FychHGnvDrMWneW kaigg PPOB_SOLTU : 360- 374: gldpi FychHAnvDrMWdeW kligg PPOC_LYCES : 362- 376: gldpl FychHSnvDrMWneW katgg PPOD_LYCES : 362- 376: gldpv FfchHSnvDrMWseW katgg PPOE_LYCES : 359- 373: gldpi FychHAnvDrMWneW kligg PPOF_LYCES : 357- 371: gldpl FychHAnvDrMWneW kligg PPO_MALDO : 357- 371: grdpi FfahHSnvDrMWsiW ktlgg PPO_SPIOL : 384- 398: grdpl FychHSnvDrMWslW tdvlh PPO_VICFA : 363- 377: ardpi FyshHSnvDrLWyiW ktlgg PPO_VITVI : 371- 385: grdpi FfghHAnvDrMWniW ktigg TYR1_HUMAN : 400- 414: pndpi FvllHTftDaVFdeW lrryn TYR1_MOUSE : 400- 414: pndpi FvllHTftDaVFdeW lrryn TYR2_HUMAN : 392- 406: andpi FvvlHSftDaIFdeW mkrfn TYR2_MOUSE : 392- 406: andpv FvvlHSftDaIFdeW lkrnn TYRO_HUMAN : 386- 400: andpi FllhHAfvDsIFeqW lrrhr TYRO_MOUSE : 386- 400: andpi FllhHAfvDsIFeqW lrrhr TYRO_NEUCR : 302- 316: afdpl FwlhHVnvDrLWsiW qdlnp TYRO_RANNI : 390- 404: andpi FvlhHAfvDsLFeqW lrrhq TYRO_RHIME : 252- 266: pldpi FflhHCniDrLWdvW trkqq TYRO_STRAT : 211- 225: pndpv FwlhHAyiDkLWaeW qrrhp TYRO_STRGA : 211- 225: pndpv FwlhHAyvDkLWaeW qrrhp YKH1_CAEEL : 195- 209: andpv FflhHTfvDfIWemW rqnhq H 8: 21.5059 31( 24) F-x(2,3)-H-x(3,4)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 31(24) HCY_OCTDO : 213- 227: aydpi FylhHsnv-DrLWviW qelqk HCY_OCTDO : 213- 227: aydpi Fyl-HhsnvDrLWviW qelqk HCY_OCTDO : 626- 640: sfdpi FyvhHsmv-DrLWaiW qalqe HCY_OCTDO : 626- 640: sfdpi Fyv-HhsmvDrLWaiW qalqe HCY_OCTDO : 1035- 1049: sydpl FylhHsnt-DrIWsvW qalqk HCY_OCTDO : 1035- 1049: sydpl Fyl-HhsntDrIWsvW qalqk PPOA_LYCES : 366- 380: gldpl FychHsnv-DrMWneW katgg PPOA_LYCES : 366- 380: gldpl Fyc-HhsnvDrMWneW katgg PPOB_LYCES : 367- 381: gldpv FychHgnv-DrMWneW kaigg PPOB_LYCES : 367- 381: gldpv Fyc-HhgnvDrMWneW kaigg PPOB_SOLTU : 360- 374: gldpi FychHanv-DrMWdeW kligg PPOB_SOLTU : 360- 374: gldpi Fyc-HhanvDrMWdeW kligg PPOC_LYCES : 362- 376: gldpl FychHsnv-DrMWneW katgg PPOC_LYCES : 362- 376: gldpl Fyc-HhsnvDrMWneW katgg PPOD_LYCES : 362- 376: gldpv FfchHsnv-DrMWseW katgg PPOD_LYCES : 362- 376: gldpv Ffc-HhsnvDrMWseW katgg PPOD_LYCES : 363- 376: ldpvf Fch-Hsnv-DrMWseW katgg PPOE_LYCES : 359- 373: gldpi FychHanv-DrMWneW kligg PPOE_LYCES : 359- 373: gldpi Fyc-HhanvDrMWneW kligg PPOF_LYCES : 357- 371: gldpl FychHanv-DrMWneW kligg PPOF_LYCES : 357- 371: gldpl Fyc-HhanvDrMWneW kligg PPO_MALDO : 357- 371: grdpi FfahHsnv-DrMWsiW ktlgg PPO_MALDO : 357- 371: grdpi Ffa-HhsnvDrMWsiW ktlgg PPO_MALDO : 358- 371: rdpif Fah-Hsnv-DrMWsiW ktlgg PPO_SPIOL : 384- 398: grdpl FychHsnv-DrMWslW tdvlh PPO_SPIOL : 384- 398: grdpl Fyc-HhsnvDrMWslW tdvlh PPO_VICFA : 363- 377: ardpi FyshHsnv-DrLWyiW ktlgg PPO_VICFA : 363- 377: ardpi Fys-HhsnvDrLWyiW ktlgg PPO_VITVI : 371- 385: grdpi FfghHanv-DrMWniW ktigg PPO_VITVI : 371- 385: grdpi Ffg-HhanvDrMWniW ktigg PPO_VITVI : 372- 385: rdpif Fgh-Hanv-DrMWniW ktigg TYR1_HUMAN : 400- 414: pndpi FvllHtft-DaVFdeW lrryn TYR1_MOUSE : 400- 414: pndpi FvllHtft-DaVFdeW lrryn TYR2_HUMAN : 392- 406: andpi FvvlHsft-DaIFdeW mkrfn TYR2_MOUSE : 392- 406: andpv FvvlHsft-DaIFdeW lkrnn TYRO_HUMAN : 386- 400: andpi FllhHafv-DsIFeqW lrrhr TYRO_HUMAN : 386- 400: andpi Fll-HhafvDsIFeqW lrrhr TYRO_MOUSE : 386- 400: andpi FllhHafv-DsIFeqW lrrhr TYRO_MOUSE : 386- 400: andpi Fll-HhafvDsIFeqW lrrhr TYRO_NEUCR : 302- 316: afdpl FwlhHvnv-DrLWsiW qdlnp TYRO_NEUCR : 302- 316: afdpl Fwl-HhvnvDrLWsiW qdlnp TYRO_RANNI : 390- 404: andpi FvlhHafv-DsLFeqW lrrhq TYRO_RANNI : 390- 404: andpi Fvl-HhafvDsLFeqW lrrhq TYRO_RHIME : 252- 266: pldpi FflhHcni-DrLWdvW trkqq TYRO_RHIME : 252- 266: pldpi Ffl-HhcniDrLWdvW trkqq TYRO_RHIME : 253- 266: ldpif Flh-Hcni-DrLWdvW trkqq TYRO_STRAT : 211- 225: pndpv FwlhHayi-DkLWaeW qrrhp TYRO_STRAT : 211- 225: pndpv Fwl-HhayiDkLWaeW qrrhp TYRO_STRGA : 211- 225: pndpv FwlhHayv-DkLWaeW qrrhp TYRO_STRGA : 211- 225: pndpv Fwl-HhayvDkLWaeW qrrhp YKH1_CAEEL : 195- 209: andpv FflhHtfv-DfIWemW rqnhq YKH1_CAEEL : 195- 209: andpv Ffl-HhtfvDfIWemW rqnhq YKH1_CAEEL : 196- 209: ndpvf Flh-Htfv-DfIWemW rqnhq I 9: 19.9815 26( 24) H-[ACGSTV]-x(2)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 26(24) HCY_OCTDO : 217- 227: ifylh HSnvDrLWviW qelqk HCY_OCTDO : 630- 640: ifyvh HSmvDrLWaiW qalqe HCY_OCTDO : 1039- 1049: lfylh HSntDrIWsvW qalqk PPOA_LYCES : 370- 380: lfych HSnvDrMWneW katgg PPOB_LYCES : 371- 381: vfych HGnvDrMWneW kaigg PPOB_SOLTU : 364- 374: ifych HAnvDrMWdeW kligg PPOC_LYCES : 366- 376: lfych HSnvDrMWneW katgg PPOD_LYCES : 366- 376: vffch HSnvDrMWseW katgg PPOE_LYCES : 363- 373: ifych HAnvDrMWneW kligg PPOF_LYCES : 361- 371: lfych HAnvDrMWneW kligg PPO_MALDO : 361- 371: iffah HSnvDrMWsiW ktlgg PPO_SPIOL : 388- 398: lfych HSnvDrMWslW tdvlh PPO_VICFA : 367- 377: ifysh HSnvDrLWyiW ktlgg PPO_VITVI : 375- 385: iffgh HAnvDrMWniW ktigg TYR1_HUMAN : 404- 414: ifvll HTftDaVFdeW lrryn TYR1_MOUSE : 404- 414: ifvll HTftDaVFdeW lrryn TYR2_HUMAN : 396- 406: ifvvl HSftDaIFdeW mkrfn TYR2_MOUSE : 396- 406: vfvvl HSftDaIFdeW lkrnn TYRO_HUMAN : 390- 400: ifllh HAfvDsIFeqW lrrhr TYRO_MOUSE : 390- 400: ifllh HAfvDsIFeqW lrrhr TYRO_NEUCR : 306- 316: lfwlh HVnvDrLWsiW qdlnp TYRO_RANNI : 394- 404: ifvlh HAfvDsLFeqW lrrhq TYRO_RHIME : 256- 266: ifflh HCniDrLWdvW trkqq TYRO_STRAT : 215- 225: vfwlh HAyiDkLWaeW qrrhp TYRO_STRGA : 215- 225: vfwlh HAyvDkLWaeW qrrhp YKH1_CAEEL : 199- 209: vfflh HTfvDfIWemW rqnhq J 10: 19.9719 25( 24) S-x(3,5)-P-[ILV]-F-x(2,4)-H-x(3)-[ADV] Occurences: 25(24) HCY_OCTDO : 620- 633: sslvy Ssfd--PIFyv--HhsmV drlwa HCY_OCTDO : 620- 634: sslvy Ssfd--PIFyvh-HsmvD rlwai PPOA_LYCES : 359- 373: mgnfy Sagld-PLFyc--HhsnV drmwn PPOA_LYCES : 359- 374: mgnfy Sagld-PLFych-HsnvD rmwne PPOB_LYCES : 360- 374: mgnfy Sagld-PVFyc--HhgnV drmwn PPOB_LYCES : 360- 375: mgnfy Sagld-PVFych-HgnvD rmwne PPOB_SOLTU : 353- 367: mgnfy Sagld-PIFyc--HhanV drmwd PPOB_SOLTU : 353- 368: mgnfy Sagld-PIFych-HanvD rmwde PPOC_LYCES : 355- 369: mgnfy Sagld-PLFyc--HhsnV drmwn PPOC_LYCES : 355- 370: mgnfy Sagld-PLFych-HsnvD rmwne PPOD_LYCES : 355- 369: yghfy Sagld-PVFfc--HhsnV drmws PPOD_LYCES : 355- 370: yghfy Sagld-PVFfch-HsnvD rmwse PPOE_LYCES : 352- 366: mgnfy Sagld-PIFyc--HhanV drmwn PPOE_LYCES : 352- 367: mgnfy Sagld-PIFych-HanvD rmwne PPOF_LYCES : 350- 364: mgnfy Sagld-PLFyc--HhanV drmwn PPOF_LYCES : 350- 365: mgnfy Sagld-PLFych-HanvD rmwne PPO_MALDO : 350- 364: mgnfy Sagrd-PIFfa--HhsnV drmws PPO_MALDO : 350- 365: mgnfy Sagrd-PIFfah-HsnvD rmwsi PPO_SPIOL : 377- 391: mgafw Sagrd-PLFyc--HhsnV drmws PPO_SPIOL : 377- 392: mgafw Sagrd-PLFych-HsnvD rmwsl PPO_VICFA : 356- 370: mgify Saard-PIFys--HhsnV drlwy PPO_VICFA : 356- 371: mgify Saard-PIFysh-HsnvD rlwyi PPO_VITVI : 21- 38: nttni SafppsPLFqrasHvpvA rnrsr TYR1_HUMAN : 394- 408: gqthl Spnd--PIFvll-HtftD avfde TYR1_MOUSE : 394- 408: gqthl Spnd--PIFvll-HtftD avfde TYR2_HUMAN : 385- 400: nalph Saand-PIFvvl-HsftD aifde TYR2_MOUSE : 385- 400: nalph Saand-PVFvvl-HsftD aifde TYRO_HUMAN : 380- 393: sqvqg Sand--PIFll--HhafV dsife TYRO_HUMAN : 380- 394: sqvqg Sand--PIFllh-HafvD sifeq TYRO_MOUSE : 380- 393: sqvqg Sand--PIFll--HhafV dsife TYRO_MOUSE : 380- 394: sqvqg Sand--PIFllh-HafvD sifeq TYRO_NEUCR : 296- 309: sslev Safd--PLFwl--HhvnV drlws TYRO_NEUCR : 296- 310: sslev Safd--PLFwlh-HvnvD rlwsi TYRO_RANNI : 384- 397: ssvqg Sand--PIFvl--HhafV dslfe TYRO_RANNI : 384- 398: ssvqg Sand--PIFvlh-HafvD slfeq TYRO_RHIME : 246- 260: msqnl Spld--PIFflh-HcniD rlwdv TYRO_STRAT : 205- 219: matgv Spnd--PVFwlh-HayiD klwae TYRO_STRGA : 205- 218: matgm Spnd--PVFwl--HhayV dklwa TYRO_STRGA : 205- 219: matgm Spnd--PVFwlh-HayvD klwae YKH1_CAEEL : 187- 202: dmkpp StsandPVFfl--HhtfV dfiwe YKH1_CAEEL : 187- 203: dmkpp StsandPVFflh-HtfvD fiwem YKH1_CAEEL : 189- 202: kppst Sand--PVFfl--HhtfV dfiwe YKH1_CAEEL : 189- 203: kppst Sand--PVFflh-HtfvD fiwem K 11: 17.8358 48( 24) H-x(3,4)-D-x-[ILMV]-[FW]-x(2)-W Occurences: 48(24) HCY_OCTDO : 216- 227: pifyl HhsnvDrLWviW qelqk HCY_OCTDO : 217- 227: ifylh Hsnv-DrLWviW qelqk HCY_OCTDO : 629- 640: pifyv HhsmvDrLWaiW qalqe HCY_OCTDO : 630- 640: ifyvh Hsmv-DrLWaiW qalqe HCY_OCTDO : 1038- 1049: plfyl HhsntDrIWsvW qalqk HCY_OCTDO : 1039- 1049: lfylh Hsnt-DrIWsvW qalqk PPOA_LYCES : 369- 380: plfyc HhsnvDrMWneW katgg PPOA_LYCES : 370- 380: lfych Hsnv-DrMWneW katgg PPOB_LYCES : 370- 381: pvfyc HhgnvDrMWneW kaigg PPOB_LYCES : 371- 381: vfych Hgnv-DrMWneW kaigg PPOB_SOLTU : 363- 374: pifyc HhanvDrMWdeW kligg PPOB_SOLTU : 364- 374: ifych Hanv-DrMWdeW kligg PPOC_LYCES : 365- 376: plfyc HhsnvDrMWneW katgg PPOC_LYCES : 366- 376: lfych Hsnv-DrMWneW katgg PPOD_LYCES : 365- 376: pvffc HhsnvDrMWseW katgg PPOD_LYCES : 366- 376: vffch Hsnv-DrMWseW katgg PPOE_LYCES : 362- 373: pifyc HhanvDrMWneW kligg PPOE_LYCES : 363- 373: ifych Hanv-DrMWneW kligg PPOF_LYCES : 360- 371: plfyc HhanvDrMWneW kligg PPOF_LYCES : 361- 371: lfych Hanv-DrMWneW kligg PPO_MALDO : 360- 371: piffa HhsnvDrMWsiW ktlgg PPO_MALDO : 361- 371: iffah Hsnv-DrMWsiW ktlgg PPO_SPIOL : 387- 398: plfyc HhsnvDrMWslW tdvlh PPO_SPIOL : 388- 398: lfych Hsnv-DrMWslW tdvlh PPO_VICFA : 366- 377: pifys HhsnvDrLWyiW ktlgg PPO_VICFA : 367- 377: ifysh Hsnv-DrLWyiW ktlgg PPO_VITVI : 374- 385: piffg HhanvDrMWniW ktigg PPO_VITVI : 375- 385: iffgh Hanv-DrMWniW ktigg TYR1_HUMAN : 404- 414: ifvll Htft-DaVFdeW lrryn TYR1_MOUSE : 404- 414: ifvll Htft-DaVFdeW lrryn TYR2_HUMAN : 396- 406: ifvvl Hsft-DaIFdeW mkrfn TYR2_MOUSE : 396- 406: vfvvl Hsft-DaIFdeW lkrnn TYRO_HUMAN : 389- 400: pifll HhafvDsIFeqW lrrhr TYRO_HUMAN : 390- 400: ifllh Hafv-DsIFeqW lrrhr TYRO_MOUSE : 389- 400: pifll HhafvDsIFeqW lrrhr TYRO_MOUSE : 390- 400: ifllh Hafv-DsIFeqW lrrhr TYRO_NEUCR : 305- 316: plfwl HhvnvDrLWsiW qdlnp TYRO_NEUCR : 306- 316: lfwlh Hvnv-DrLWsiW qdlnp TYRO_RANNI : 393- 404: pifvl HhafvDsLFeqW lrrhq TYRO_RANNI : 394- 404: ifvlh Hafv-DsLFeqW lrrhq TYRO_RHIME : 255- 266: piffl HhcniDrLWdvW trkqq TYRO_RHIME : 256- 266: ifflh Hcni-DrLWdvW trkqq TYRO_STRAT : 214- 225: pvfwl HhayiDkLWaeW qrrhp TYRO_STRAT : 215- 225: vfwlh Hayi-DkLWaeW qrrhp TYRO_STRGA : 214- 225: pvfwl HhayvDkLWaeW qrrhp TYRO_STRGA : 215- 225: vfwlh Hayv-DkLWaeW qrrhp YKH1_CAEEL : 198- 209: pvffl HhtfvDfIWemW rqnhq YKH1_CAEEL : 199- 209: vfflh Htfv-DfIWemW rqnhq L 12: 13.7342 32( 24) D-x(1,2)-F-x(2,3)-H-x(2)-[GNTV] Occurences: 32(24) HCY_OCTDO : 210- 219: hyaay DpiFyl-HhsN vdrlw HCY_OCTDO : 210- 220: hyaay DpiFylhHsnV drlwv HCY_OCTDO : 623- 633: vyssf DpiFyvhHsmV drlwa HCY_OCTDO : 949- 959: vteek DnsFhhaHidV antdt HCY_OCTDO : 1032- 1041: hytsy DplFyl-HhsN tdriw HCY_OCTDO : 1032- 1042: hytsy DplFylhHsnT driws PPOA_LYCES : 363- 372: ysagl DplFyc-HhsN vdrmw PPOA_LYCES : 363- 373: ysagl DplFychHsnV drmwn PPOB_LYCES : 364- 373: ysagl DpvFyc-HhgN vdrmw PPOB_LYCES : 364- 374: ysagl DpvFychHgnV drmwn PPOB_SOLTU : 357- 366: ysagl DpiFyc-HhaN vdrmw PPOB_SOLTU : 357- 367: ysagl DpiFychHanV drmwd PPOC_LYCES : 359- 368: ysagl DplFyc-HhsN vdrmw PPOC_LYCES : 359- 369: ysagl DplFychHsnV drmwn PPOD_LYCES : 359- 368: ysagl DpvFfc-HhsN vdrmw PPOD_LYCES : 359- 369: ysagl DpvFfchHsnV drmws PPOE_LYCES : 356- 365: ysagl DpiFyc-HhaN vdrmw PPOE_LYCES : 356- 366: ysagl DpiFychHanV drmwn PPOF_LYCES : 354- 363: ysagl DplFyc-HhaN vdrmw PPOF_LYCES : 354- 364: ysagl DplFychHanV drmwn PPO_MALDO : 354- 363: ysagr DpiFfa-HhsN vdrmw PPO_MALDO : 354- 364: ysagr DpiFfahHsnV drmws PPO_SPIOL : 138- 148: lnitk DfeFknyHnhV kkvrr PPO_SPIOL : 381- 390: wsagr DplFyc-HhsN vdrmw PPO_SPIOL : 381- 391: wsagr DplFychHsnV drmws PPO_VICFA : 360- 369: ysaar DpiFys-HhsN vdrlw PPO_VICFA : 360- 370: ysaar DpiFyshHsnV drlwy PPO_VITVI : 368- 377: ytagr DpiFfg-HhaN vdrmw PPO_VITVI : 368- 378: ytagr DpiFfghHanV drmwn TYR1_HUMAN : 397- 407: hlspn DpiFvllHtfT davfd TYR1_MOUSE : 103- 111: tcqcn Dn-Fsg-HncG tcrpg TYR1_MOUSE : 397- 407: hlspn DpiFvllHtfT davfd TYR2_HUMAN : 389- 399: hsaan DpiFvvlHsfT daifd TYR2_MOUSE : 389- 399: hsaan DpvFvvlHsfT daifd TYRO_HUMAN : 174- 183: diniy Dl-FvwmHyyV smdal TYRO_HUMAN : 383- 393: qgsan DpiFllhHafV dsife TYRO_MOUSE : 174- 183: diniy Dl-FvwmHyyV srdtl TYRO_MOUSE : 383- 393: qgsan DpiFllhHafV dsife TYRO_NEUCR : 299- 308: evsaf DplFwl-HhvN vdrlw TYRO_NEUCR : 299- 309: evsaf DplFwlhHvnV drlws TYRO_RANNI : 387- 397: qgsan DpiFvlhHafV dslfe TYRO_RHIME : 249- 258: nlspl DpiFfl-HhcN idrlw TYRO_STRAT : 174- 182: wnsgs Dg-Frn-HleG wrgvn TYRO_STRGA : 174- 182: wnsas Dg-Frn-HleG wrgvn TYRO_STRGA : 208- 218: gmspn DpvFwlhHayV dklwa YKH1_CAEEL : 192- 202: stsan DpvFflhHtfV dfiwe M 13: 13.7131 36( 24) D-x(0,1)-P-x(0,1)-F-x-[ALPV] Occurences: 36(24) HCY_OCTDO : 210- 215: hyaay D-PiFyL hhsnv HCY_OCTDO : 623- 628: vyssf D-PiFyV hhsmv HCY_OCTDO : 1032- 1037: hytsy D-PlFyL hhsnt PPOA_LYCES : 223- 229: lgsli DdPtFgL pfwnw PPOA_LYCES : 224- 229: gslid D-PtFgL pfwnw PPOB_LYCES : 224- 230: lgkli DdPtFaL pywnw PPOB_LYCES : 225- 230: gklid D-PtFaL pywnw PPOB_SOLTU : 224- 229: gslin D-PtFaL pywnw PPOC_LYCES : 219- 225: lgsli DdPtFgL pfwnw PPOC_LYCES : 220- 225: gslid D-PtFgL pfwnw PPOD_LYCES : 219- 225: agkli DdPtFaL pywnw PPOD_LYCES : 220- 225: gklid D-PtFaL pywnw PPOE_LYCES : 165- 169: reldk D-P-FdP lgfkq PPOE_LYCES : 223- 228: gslin D-PtFaL pywnw PPOF_LYCES : 165- 169: reldk D-P-FdP lgfkq PPOF_LYCES : 223- 228: gslin D-PtFaL pywnw PPO_MALDO : 222- 227: gklin D-PtFaL pfwnw PPO_MALDO : 354- 359: ysagr D-PiFfA hhsnv PPO_SPIOL : 266- 272: ifkem DsPlFdP nrntn PPO_VICFA : 228- 233: gslin D-PtFaL pfwny PPO_VITVI : 236- 242: lakli DdPtFaL pywaw PPO_VITVI : 237- 242: aklid D-PtFaL pywaw TYR1_HUMAN : 397- 402: hlspn D-PiFvL lhtft TYR1_MOUSE : 397- 402: hlspn D-PiFvL lhtft TYR2_HUMAN : 389- 394: hsaan D-PiFvV lhsft TYR2_MOUSE : 389- 394: hsaan D-PvFvV lhsft TYRO_HUMAN : 383- 388: qgsan D-PiFlL hhafv TYRO_MOUSE : 383- 388: qgsan D-PiFlL hhafv TYRO_NEUCR : 299- 304: evsaf D-PlFwL hhvnv TYRO_RANNI : 387- 392: qgsan D-PiFvL hhafv TYRO_RHIME : 249- 254: nlspl D-PiFfL hhcni TYRO_STRAT : 116- 121: dgqvm DgP-FaA sagnw TYRO_STRAT : 208- 213: gvspn D-PvFwL hhayi TYRO_STRGA : 116- 121: dgrvm DgP-FaA sagnw TYRO_STRGA : 208- 213: gmspn D-PvFwL hhayv YKH1_CAEEL : 192- 197: stsan D-PvFfL hhtfv N 14: 12.0102 31( 24) P-x-F-x(1,2)-L Occurences: 31(24) HCY_OCTDO : 211- 215: yaayd PiFy-L hhsnv HCY_OCTDO : 1033- 1037: ytsyd PlFy-L hhsnt PPOA_LYCES : 225- 229: slidd PtFg-L pfwnw PPOB_LYCES : 226- 230: klidd PtFa-L pywnw PPOB_SOLTU : 225- 229: slind PtFa-L pywnw PPOC_LYCES : 221- 225: slidd PtFg-L pfwnw PPOD_LYCES : 221- 225: klidd PtFa-L pywnw PPOE_LYCES : 224- 228: slind PtFa-L pywnw PPOF_LYCES : 224- 228: slind PtFa-L pywnw PPO_MALDO : 223- 227: klind PtFa-L pfwnw PPO_SPIOL : 129- 133: dhccp PpFd-L nitkd PPO_SPIOL : 241- 245: klink PdFa-L pywnw PPO_VICFA : 229- 233: slind PtFa-L pfwny PPO_VITVI : 238- 242: klidd PtFa-L pywaw TYR1_HUMAN : 242- 246: emlqe PsFs-L pywnf TYR1_HUMAN : 398- 402: lspnd PiFv-L lhtft TYR1_HUMAN : 398- 403: lspnd PiFvlL htftd TYR1_MOUSE : 242- 246: emlqe PsFs-L pywnf TYR1_MOUSE : 398- 402: lspnd PiFv-L lhtft TYR1_MOUSE : 398- 403: lspnd PiFvlL htftd TYR2_HUMAN : 390- 395: saand PiFvvL hsftd TYR2_MOUSE : 390- 395: saand PvFvvL hsftd TYRO_HUMAN : 384- 388: gsand PiFl-L hhafv TYRO_MOUSE : 384- 388: gsand PiFl-L hhafv TYRO_NEUCR : 300- 304: vsafd PlFw-L hhvnv TYRO_RANNI : 388- 392: gsand PiFv-L hhafv TYRO_RHIME : 71- 75: elsgn PdFa-L pywdw TYRO_RHIME : 139- 144: nlrgy PdFdaL wsdam TYRO_RHIME : 250- 254: lspld PiFf-L hhcni TYRO_STRAT : 209- 213: vspnd PvFw-L hhayi TYRO_STRGA : 209- 213: mspnd PvFw-L hhayv YKH1_CAEEL : 163- 168: gcpfr PyFgaL eytha YKH1_CAEEL : 193- 197: tsand PvFf-L hhtfv O 15: 12.0102 33( 24) S-x(2,3)-D-P Occurences: 33(24) HCY_OCTDO : 620- 624: sslvy Ssf-DP ifyvh PPOA_LYCES : 220- 225: erilg SlidDP tfglp PPOA_LYCES : 359- 364: mgnfy SaglDP lfych PPOB_LYCES : 360- 365: mgnfy SaglDP vfych PPOB_SOLTU : 220- 225: erilg SlinDP tfalp PPOB_SOLTU : 353- 358: mgnfy SaglDP ifych PPOC_LYCES : 216- 221: erilg SlidDP tfglp PPOC_LYCES : 355- 360: mgnfy SaglDP lfych PPOD_LYCES : 355- 360: yghfy SaglDP vffch PPOE_LYCES : 219- 224: erilg SlinDP tfalp PPOE_LYCES : 352- 357: mgnfy SaglDP ifych PPOF_LYCES : 219- 224: erilg SlinDP tfalp PPOF_LYCES : 350- 355: mgnfy SaglDP lfych PPO_MALDO : 350- 355: mgnfy SagrDP iffah PPO_SPIOL : 267- 272: fkemd SplfDP nrntn PPO_SPIOL : 317- 322: amvyp SvsdDP nkael PPO_SPIOL : 377- 382: mgafw SagrDP lfych PPO_VICFA : 224- 229: erilg SlinDP tfalp PPO_VICFA : 356- 361: mgify SaarDP ifysh PPO_VITVI : 54- 59: kvscn SangDP nsdst TYR1_HUMAN : 394- 398: gqthl Spn-DP ifvll TYR1_MOUSE : 394- 398: gqthl Spn-DP ifvll TYR2_HUMAN : 385- 390: nalph SaanDP ifvvl TYR2_MOUSE : 385- 390: nalph SaanDP vfvvl TYRO_HUMAN : 380- 384: sqvqg San-DP ifllh TYRO_MOUSE : 380- 384: sqvqg San-DP ifllh TYRO_NEUCR : 296- 300: sslev Saf-DP lfwlh TYRO_RANNI : 384- 388: ssvqg San-DP ifvlh TYRO_RHIME : 246- 250: msqnl Spl-DP ifflh TYRO_STRAT : 205- 209: matgv Spn-DP vfwlh TYRO_STRGA : 205- 209: matgm Spn-DP vfwlh YKH1_CAEEL : 79- 84: dsvle SylpDP rdsim YKH1_CAEEL : 189- 193: kppst San-DP vfflh P 16: 11.5102 27( 24) H-x(0,1)-R-x(1,2)-Y Occurences: 27(24) HCY_OCTDO : 74- 77: tfphw H-Rl-Y vvqfe HCY_OCTDO : 490- 493: vfphw H-Rv-Y llhfe PPOA_LYCES : 207- 210: lffpf H-Rw-Y lyfye PPOB_LYCES : 208- 211: lffpf H-Rw-Y lyfye PPOB_SOLTU : 207- 210: lffpf H-Rw-Y lyfye PPOC_LYCES : 203- 206: lffpf H-Rw-Y lyfye PPOD_LYCES : 203- 206: lffpf H-Rw-Y lyfye PPOE_LYCES : 206- 209: lffpf H-Rw-Y lyfye PPOF_LYCES : 206- 209: lffpf H-Rw-Y lyfye PPO_MALDO : 205- 208: lffpf H-Ry-Y lyffe PPO_SPIOL : 223- 226: lfpsf H-Rw-Y lyfye PPO_VICFA : 211- 214: lffpf H-Rw-Y lyfye PPO_VITVI : 220- 223: lflpf H-Ry-Y lyfne TYR1_HUMAN : 434- 438: napig HnRq-Y nmvpf TYR1_MOUSE : 75- 79: adsrp HsRh-Y phdgk TYR1_MOUSE : 434- 438: napig HnRq-Y nmvpf TYR2_HUMAN : 426- 430: lapig HnRm-Y nmvpf TYR2_MOUSE : 426- 430: lapig HnRm-Y nmvpf TYRO_HUMAN : 420- 425: napig HnResY mvpfi TYRO_MOUSE : 420- 425: napig HnRdsY mvpfi TYRO_NEUCR : 105- 108: lfitw H-Rp-Y lalye TYRO_RANNI : 215- 218: gflpw H-Rf-Y lllwe TYRO_RANNI : 424- 428: napvg HnRe-Y nmvpf TYRO_RHIME : 53- 56: wftsw H-Rg-Y lgyfe TYRO_STRAT : 264- 268: aalld HtRh-Y tfdv TYRO_STRGA : 62- 65: sflpw H-Rr-Y llefe YKH1_CAEEL : 50- 53: gflvw H-Re-Y mkrme Q 17: 11.5102 40( 24) F-x(2,3)-H-x(1,2)-Y Occurences: 40(24) HCY_OCTDO : 70- 77: hgmat FphwHrlY vvqfe HCY_OCTDO : 486- 493: hgmpv FphwHrvY llhfe PPOA_LYCES : 203- 210: hnswl FfpfHrwY lyfye PPOA_LYCES : 204- 210: nswlf Fpf-HrwY lyfye PPOB_LYCES : 204- 211: hnswl FfpfHrwY lyfye PPOB_LYCES : 205- 211: nswlf Fpf-HrwY lyfye PPOB_SOLTU : 203- 210: hfswl FfpfHrwY lyfye PPOB_SOLTU : 204- 210: fswlf Fpf-HrwY lyfye PPOC_LYCES : 199- 206: hnswl FfpfHrwY lyfye PPOC_LYCES : 200- 206: nswlf Fpf-HrwY lyfye PPOD_LYCES : 199- 206: hnswl FfpfHrwY lyfye PPOD_LYCES : 200- 206: nswlf Fpf-HrwY lyfye PPOE_LYCES : 202- 209: hfswl FfpfHrwY lyfye PPOE_LYCES : 203- 209: fswlf Fpf-HrwY lyfye PPOF_LYCES : 202- 209: hfswl FfpfHrwY lyfye PPOF_LYCES : 203- 209: fswlf Fpf-HrwY lyfye PPO_MALDO : 201- 207: hnswl FfpfHr-Y ylyff PPO_MALDO : 201- 208: hnswl FfpfHryY lyffe PPO_MALDO : 202- 207: nswlf Fpf-Hr-Y ylyff PPO_MALDO : 202- 208: nswlf Fpf-HryY lyffe PPO_SPIOL : 219- 226: haswl FpsfHrwY lyfye PPO_VICFA : 207- 214: hgswl FfpfHrwY lyfye PPO_VICFA : 208- 214: gswlf Fpf-HrwY lyfye PPO_VITVI : 216- 222: haswl FlpfHr-Y ylyfn PPO_VITVI : 216- 223: haswl FlpfHryY lyfne TYR1_HUMAN : 188- 194: siyny FvwtHy-Y svkkt TYR1_HUMAN : 220- 226: hegpa FltwHr-Y hllrl TYR1_MOUSE : 188- 194: svyny FvwtHy-Y svkkt TYR1_MOUSE : 220- 226: hegpa FltwHr-Y hllql TYR2_HUMAN : 185- 191: svydf FvwlHy-Y svrdt TYR2_HUMAN : 216- 222: hqgpa FvtwHr-Y hllcl TYR2_MOUSE : 185- 191: svydf FvwlHy-Y svrdt TYR2_MOUSE : 216- 222: hqgpa FvtwHr-Y hllwl TYRO_HUMAN : 176- 182: niydl FvwmHy-Y vsmda TYRO_MOUSE : 176- 182: niydl FvwmHy-Y vsrdt TYRO_NEUCR : 101- 108: hssil FitwHrpY lalye TYRO_RANNI : 180- 186: saydl FvwiHy-Y asrda TYRO_RANNI : 211- 218: heapg FlpwHrfY lllwe TYRO_RHIME : 49- 56: hgdww FtswHrgY lgyfe TYRO_STRAT : 211- 217: pndpv FwlhHa-Y idklw TYRO_STRAT : 211- 217: pndpv Fwl-HhaY idklw TYRO_STRGA : 58- 65: hrsps FlpwHrrY llefe TYRO_STRGA : 211- 217: pndpv FwlhHa-Y vdklw TYRO_STRGA : 211- 217: pndpv Fwl-HhaY vdklw YKH1_CAEEL : 46- 53: hsgpg FlvwHreY mkrme R 18: 11.5102 32( 24) F-x(2,3)-H-x(4,5)-R Occurences: 32(24) HCY_OCTDO : 213- 222: aydpi FylhHsnvd-R lwviw HCY_OCTDO : 213- 222: aydpi Fyl-HhsnvdR lwviw HCY_OCTDO : 626- 635: sfdpi FyvhHsmvd-R lwaiw HCY_OCTDO : 626- 635: sfdpi Fyv-HhsmvdR lwaiw HCY_OCTDO : 1035- 1044: sydpl FylhHsntd-R iwsvw HCY_OCTDO : 1035- 1044: sydpl Fyl-HhsntdR iwsvw PPOA_LYCES : 366- 375: gldpl FychHsnvd-R mwnew PPOA_LYCES : 366- 375: gldpl Fyc-HhsnvdR mwnew PPOB_LYCES : 367- 376: gldpv FychHgnvd-R mwnew PPOB_LYCES : 367- 376: gldpv Fyc-HhgnvdR mwnew PPOB_LYCES : 403- 412: nseff FydeHknpy-R vkvrd PPOB_SOLTU : 360- 369: gldpi FychHanvd-R mwdew PPOB_SOLTU : 360- 369: gldpi Fyc-HhanvdR mwdew PPOC_LYCES : 362- 371: gldpl FychHsnvd-R mwnew PPOC_LYCES : 362- 371: gldpl Fyc-HhsnvdR mwnew PPOD_LYCES : 362- 371: gldpv FfchHsnvd-R mwsew PPOD_LYCES : 362- 371: gldpv Ffc-HhsnvdR mwsew PPOD_LYCES : 363- 371: ldpvf Fch-Hsnvd-R mwsew PPOE_LYCES : 359- 368: gldpi FychHanvd-R mwnew PPOE_LYCES : 359- 368: gldpi Fyc-HhanvdR mwnew PPOF_LYCES : 357- 366: gldpl FychHanvd-R mwnew PPOF_LYCES : 357- 366: gldpl Fyc-HhanvdR mwnew PPO_MALDO : 357- 366: grdpi FfahHsnvd-R mwsiw PPO_MALDO : 357- 366: grdpi Ffa-HhsnvdR mwsiw PPO_MALDO : 358- 366: rdpif Fah-Hsnvd-R mwsiw PPO_SPIOL : 384- 393: grdpl FychHsnvd-R mwslw PPO_SPIOL : 384- 393: grdpl Fyc-HhsnvdR mwslw PPO_VICFA : 363- 372: ardpi FyshHsnvd-R lwyiw PPO_VICFA : 363- 372: ardpi Fys-HhsnvdR lwyiw PPO_VITVI : 371- 380: grdpi FfghHanvd-R mwniw PPO_VITVI : 371- 380: grdpi Ffg-HhanvdR mwniw PPO_VITVI : 372- 380: rdpif Fgh-Hanvd-R mwniw TYR1_HUMAN : 105- 114: hcngn Fsg-HncgtcR pgwrg TYR1_HUMAN : 220- 230: hegpa FltwHryhllR lekdm TYR1_MOUSE : 105- 114: qcndn Fsg-HncgtcR pgwrg TYR2_HUMAN : 185- 194: svydf FvwlHyysv-R dtllg TYR2_MOUSE : 185- 194: svydf FvwlHyysv-R dtllg TYRO_HUMAN : 207- 217: heapa FlpwHrlfllR weqei TYRO_MOUSE : 176- 185: niydl FvwmHyyvs-R dtllg TYRO_NEUCR : 302- 311: afdpl FwlhHvnvd-R lwsiw TYRO_NEUCR : 302- 311: afdpl Fwl-HhvnvdR lwsiw TYRO_RANNI : 180- 189: saydl FvwiHyyas-R dafle TYRO_RHIME : 252- 261: pldpi FflhHcnid-R lwdvw TYRO_RHIME : 252- 261: pldpi Ffl-HhcnidR lwdvw TYRO_RHIME : 253- 261: ldpif Flh-Hcnid-R lwdvw TYRO_STRAT : 176- 184: sgsdg Frn-Hlegw-R gvnlh TYRO_STRGA : 176- 184: sasdg Frn-Hlegw-R gvnlh YKH1_CAEEL : 46- 56: hsgpg FlvwHreymkR meial S 19: 11.5102 40( 24) D-x(1,2)-F-x(2,3)-H Occurences: 40(24) HCY_OCTDO : 210- 216: hyaay DpiFyl-H hsnvd HCY_OCTDO : 210- 217: hyaay DpiFylhH snvdr HCY_OCTDO : 623- 629: vyssf DpiFyv-H hsmvd HCY_OCTDO : 623- 630: vyssf DpiFyvhH smvdr HCY_OCTDO : 949- 956: vteek DnsFhhaH idvan HCY_OCTDO : 1032- 1038: hytsy DplFyl-H hsntd HCY_OCTDO : 1032- 1039: hytsy DplFylhH sntdr PPOA_LYCES : 363- 369: ysagl DplFyc-H hsnvd PPOA_LYCES : 363- 370: ysagl DplFychH snvdr PPOB_LYCES : 364- 370: ysagl DpvFyc-H hgnvd PPOB_LYCES : 364- 371: ysagl DpvFychH gnvdr PPOB_SOLTU : 357- 363: ysagl DpiFyc-H hanvd PPOB_SOLTU : 357- 364: ysagl DpiFychH anvdr PPOC_LYCES : 359- 365: ysagl DplFyc-H hsnvd PPOC_LYCES : 359- 366: ysagl DplFychH snvdr PPOD_LYCES : 359- 365: ysagl DpvFfc-H hsnvd PPOD_LYCES : 359- 366: ysagl DpvFfchH snvdr PPOE_LYCES : 356- 362: ysagl DpiFyc-H hanvd PPOE_LYCES : 356- 363: ysagl DpiFychH anvdr PPOF_LYCES : 354- 360: ysagl DplFyc-H hanvd PPOF_LYCES : 354- 361: ysagl DplFychH anvdr PPO_MALDO : 354- 360: ysagr DpiFfa-H hsnvd PPO_MALDO : 354- 361: ysagr DpiFfahH snvdr PPO_SPIOL : 138- 145: lnitk DfeFknyH nhvkk PPO_SPIOL : 381- 387: wsagr DplFyc-H hsnvd PPO_SPIOL : 381- 388: wsagr DplFychH snvdr PPO_VICFA : 360- 366: ysaar DpiFys-H hsnvd PPO_VICFA : 360- 367: ysaar DpiFyshH snvdr PPO_VITVI : 368- 374: ytagr DpiFfg-H hanvd PPO_VITVI : 368- 375: ytagr DpiFfghH anvdr TYR1_HUMAN : 397- 404: hlspn DpiFvllH tftda TYR1_MOUSE : 103- 108: tcqcn Dn-Fsg-H ncgtc TYR1_MOUSE : 397- 404: hlspn DpiFvllH tftda TYR2_HUMAN : 183- 189: ncsvy Df-FvwlH yysvr TYR2_HUMAN : 389- 396: hsaan DpiFvvlH sftda TYR2_MOUSE : 183- 189: ncsvy Df-FvwlH yysvr TYR2_MOUSE : 389- 396: hsaan DpvFvvlH sftda TYRO_HUMAN : 174- 180: diniy Dl-FvwmH yyvsm TYRO_HUMAN : 383- 389: qgsan DpiFll-H hafvd TYRO_HUMAN : 383- 390: qgsan DpiFllhH afvds TYRO_MOUSE : 174- 180: diniy Dl-FvwmH yyvsr TYRO_MOUSE : 383- 389: qgsan DpiFll-H hafvd TYRO_MOUSE : 383- 390: qgsan DpiFllhH afvds TYRO_NEUCR : 299- 305: evsaf DplFwl-H hvnvd TYRO_NEUCR : 299- 306: evsaf DplFwlhH vnvdr TYRO_RANNI : 178- 184: disay Dl-FvwiH yyasr TYRO_RANNI : 253- 260: celct DefFggtH ptsnn TYRO_RANNI : 387- 393: qgsan DpiFvl-H hafvd TYRO_RANNI : 387- 394: qgsan DpiFvlhH afvds TYRO_RHIME : 46- 53: dcphg DwwFtswH rgylg TYRO_RHIME : 249- 255: nlspl DpiFfl-H hcnid TYRO_RHIME : 249- 256: nlspl DpiFflhH cnidr TYRO_STRAT : 31- 37: rtgry Da-FvttH nafil TYRO_STRAT : 174- 179: wnsgs Dg-Frn-H legwr TYRO_STRAT : 208- 214: gvspn DpvFwl-H hayid TYRO_STRAT : 208- 215: gvspn DpvFwlhH ayidk TYRO_STRGA : 31- 37: rsgry De-FvttH nafii TYRO_STRGA : 174- 179: wnsas Dg-Frn-H legwr TYRO_STRGA : 208- 214: gmspn DpvFwl-H hayvd TYRO_STRGA : 208- 215: gmspn DpvFwlhH ayvdk YKH1_CAEEL : 192- 198: stsan DpvFfl-H htfvd YKH1_CAEEL : 192- 199: stsan DpvFflhH tfvdf T 20: 11.5102 44( 24) D-x(2,4)-L-x(5)-D Occurences: 44(24) HCY_OCTDO : 164- 174: qtwlf Dnia-LaleqtD ycdfe HCY_OCTDO : 210- 221: hyaay DpifyLhhsnvD rlwvi HCY_OCTDO : 689- 699: pqhlf Dynk-LgykydD lefhg HCY_OCTDO : 1032- 1043: hytsy DplfyLhhsntD riwsv HCY_OCTDO : 1184- 1195: rpfky DittsLkhlrlD ahddf PPOA_LYCES : 224- 235: gslid DptfgLpfwnwD hpkgm PPOB_LYCES : 225- 236: gklid DptfaLpywnwD hpkgm PPOB_SOLTU : 224- 235: gslin DptfaLpywnwD hpkgm PPOC_LYCES : 220- 231: gslid DptfgLpfwnwD hpkgm PPOD_LYCES : 220- 231: gklid DptfaLpywnwD hpkgm PPOE_LYCES : 223- 234: gslin DptfaLpywnwD hpkgm PPOF_LYCES : 223- 234: gslin DptfaLpywnwD hpkgm PPO_MALDO : 222- 233: gklin DptfaLpfwnwD spagm PPO_SPIOL : 242- 251: linkp Dfa--LpywnwD hrdgm PPO_SPIOL : 440- 450: vrdsf Dter-LgykyeD qelpw PPO_VICFA : 228- 239: gslin DptfaLpfwnyD apdgm PPO_VICFA : 242- 252: nydap Dgmq-LptiyaD kaspl PPO_VICFA : 416- 426: vkdsl Didk-LgyayqD vpipw PPO_VICFA : 569- 580: rlgit DlledLhvegdD nivvt PPO_VITVI : 237- 248: aklid DptfaLpywawD npdgm PPO_VITVI : 425- 435: vsdcv Dtsk-LryqyqD ipipw TYR1_HUMAN : 297- 308: sledy DtlgtLcnsteD gpirr TYR1_HUMAN : 332- 343: lpepq DvaqcLevglfD tppfy TYR1_HUMAN : 397- 408: hlspn DpifvLlhtftD avfde TYR1_HUMAN : 412- 421: tdavf Dew--LrrynaD istfp TYR1_MOUSE : 332- 343: lpepq DvtqcLevrvfD tppfy TYR1_MOUSE : 397- 408: hlspn DpifvLlhtftD avfde TYR1_MOUSE : 412- 421: tdavf Dew--LrrynaD istfp TYR2_HUMAN : 324- 335: lptlk DirdcLslqkfD nppff TYR2_MOUSE : 259- 268: cdvct Ddw--LgaarqD dptli TYRO_HUMAN : 383- 394: qgsan DpiflLhhafvD sifeq TYRO_HUMAN : 448- 458: kdlgy Dysy-LqdsdpD sfqdy TYRO_MOUSE : 383- 394: qgsan DpiflLhhafvD sifeq TYRO_NEUCR : 47- 57: llglr Dfqg-LdeaklD syyqv TYRO_NEUCR : 299- 310: evsaf DplfwLhhvnvD rlwsi TYRO_RANNI : 387- 398: qgsan DpifvLhhafvD slfeq TYRO_RHIME : 249- 260: nlspl DpiffLhhcniD rlwdv TYRO_RHIME : 288- 299: qqtqy DpepyLfyvnaD gspvs TYRO_RHIME : 445- 454: ftipi Dka--LdrlidD grlka TYRO_STRAT : 156- 165: traev Dsv--LamatyD mapwn TYRO_STRAT : 208- 219: gvspn DpvfwLhhayiD klwae TYRO_STRGA : 208- 219: gmspn DpvfwLhhayvD klwae YKH1_CAEEL : 74- 83: smpyw Dsv--LesylpD prdsi YKH1_CAEEL : 192- 203: stsan DpvffLhhtfvD fiwem Number of patterns evaluated by Pratt:3738 Total running time: 12 seconds