------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 5 sequences from file TP2_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 5 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename TP2_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: STP2_BOVIN 131 STP2_HUMAN 138 STP2_MOUSE 117 STP2_PIG 137 STP2_RAT 116 Pratt run started at Thu Feb 6 21:28:28 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 40.2005 6( 5) C-x(1,3)-K-x-R-K-x(2)-E-G-K-x(2)-K-x-K-x(2,3)-R 2: 37.0305 5( 5) K-x-R-K-x(2)-E-G-K-x(2)-K-x-K-x(2,3)-R 3: 32.8604 5( 5) R-K-x(2)-E-G-K-x(2)-K-x-K-x(2,3)-R 4: 28.6904 5( 5) K-x(2)-E-G-K-x(2)-K-x-K-x(2,3)-R 5: 28.1904 5( 5) H-x(3)-H-S-x(0,1)-S-x(1,2)-P-Q-S 6: 24.5203 5( 5) E-G-K-x(2)-K-x-K-x(2,3)-R 7: 24.0203 5( 5) K-x(2)-K-R-x(2,3)-V-x(3)-K-x(0,1)-R 8: 24.0203 6( 5) T-x(5)-P-x(1,2)-H-x(3,4)-S-x-S-x-P 9: 24.0203 5( 5) H-S-x(0,1)-S-x(1,2)-P-Q-S 10: 24.0203 7( 5) H-x(3,4)-S-x(0,1)-S-x-P-Q-S 11: 23.0203 7( 5) P-x(2)-H-x(2,4)-S-x(1,3)-P-Q-S 12: 20.3503 5( 5) G-K-x(2)-K-x-K-x(2,3)-R 13: 20.3503 5( 5) S-S-S-x(1,2)-P-x(2)-H 14: 19.8503 6( 5) S-x(0,1)-S-x(0,1)-S-S-x(2)-P 15: 19.8503 6( 5) S-x(0,1)-S-S-S-x(1,2)-P 16: 19.8503 9( 5) S-x-S-x(0,1)-S-x(0,1)-S-x(2)-P 17: 19.8503 5( 5) H-x(2,3)-S-x(0,1)-S-x-S-x-S 18: 19.8503 5( 5) C-x-Q-x(4,5)-S-x(0,1)-S-x-S 19: 19.8503 5( 5) C-x(2)-H-C-x(1,3)-S-x-S 20: 19.8503 5( 5) C-x(2)-S-x(0,1)-H-x(3,4)-S-x-S Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 86.7583 6( 5) C-x(1,3)-K-x-R-K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] B 2: 83.5883 5( 5) K-x-R-K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] C 3: 79.4182 5( 5) R-K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] D 4: 75.2482 5( 5) K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] E 5: 65.2339 5( 5) E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] F 6: 61.0639 5( 5) G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] G 7: 55.9238 5( 5) T-x(3)-[RS]-[AL]-P-x(1,2)-H-x(3,4)-S-[NS]-S-x-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] H 8: 47.9856 5( 5) H-[APT]-x-[LP]-H-S-x(0,1)-S-x(1,2)-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] I 9: 43.2019 8( 5) S-[QRS]-S-x(0,1)-S-x(0,1)-S-x(2)-P-x(2)-[HK]-[HR]-[NPS]-x-[PT]-[GPS]-x(2)-[GS]-[QRS] J 10: 39.5981 7( 5) P-x-[APT]-H-x(2,4)-S-x(1,3)-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] K 11: 37.9731 5( 5) H-S-x(0,1)-S-x(1,2)-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] L 12: 37.9731 7( 5) H-x(3,4)-S-x(0,1)-S-x-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] M 13: 36.7850 5( 5) C-x(2)-S-x(0,1)-H-x(3,4)-S-x-S-x-[ADS]-x(4)-[CS]-x-[RS]-[NRS]-x-[PST]-x-[AGS] N 14: 35.3662 5( 5) S-S-S-x(1,2)-P-x-[GS]-H-x-[NS]-x-[PQT]-[CG]-x(2)-[CGS] O 15: 34.6969 5( 5) C-[RS]-Q-x(4,5)-S-x(0,1)-S-x-S-x-[RS]-x(2)-[PS]-[APS]-x(3)-[NPT] P 16: 33.1429 5( 5) K-x(2)-K-R-x(2,3)-V-x-[KR]-x-K-x(0,1)-R-[QST]-x(3)-[KR] Q 17: 28.8645 6( 5) S-x(0,1)-S-x(0,1)-S-S-x-[RS]-P-x-[GPS]-x(4)-[PT] R 18: 25.6453 6( 5) S-x(0,1)-S-S-S-x(1,2)-P-x-[GPS]-x(4)-[PT] S 19: 23.0257 5( 5) C-[ST]-x-H-C-x(1,3)-S-x-S T 20: 19.8503 9( 5) S-x-S-x(0,1)-S-x(0,1)-S-x(2)-P Best patterns with alignements: fitness hits(seqs) Pattern A 1: 86.7583 6( 5) C-x(1,3)-K-x-R-K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] Occurences: 6(5) STP2_BOVIN : 93- 129: pvths CshsKnRKNLEGKViKRKqvkRskQVYKrKrQSSGrK yn STP2_HUMAN : 100- 136: ptilh CrcpKnRKNLEGKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_HUMAN : 102- 136: ilhcr Cp--KnRKNLEGKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_MOUSE : 81- 115: shrgs Cp--KnRKTFEGKVsKRKavrRrkRTHRaKrRTSGrR yk STP2_PIG : 99- 135: pgtrs CshsKkRKNVEGKAnKRKgikRsqQVYKtKrRSSGrK yn STP2_RAT : 80- 114: shrgs Cp--KnRKTLEGKVsKRKavrRrkRTHRaKrRSSGrR yk B 2: 83.5883 5( 5) K-x-R-K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] Occurences: 5(5) STP2_BOVIN : 97- 129: scshs KnRKNLEGKViKRKqvkRskQVYKrKrQSSGrK yn STP2_HUMAN : 104- 136: hcrcp KnRKNLEGKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_MOUSE : 83- 115: rgscp KnRKTFEGKVsKRKavrRrkRTHRaKrRTSGrR yk STP2_PIG : 103- 135: scshs KkRKNVEGKAnKRKgikRsqQVYKtKrRSSGrK yn STP2_RAT : 82- 114: rgscp KnRKTLEGKVsKRKavrRrkRTHRaKrRSSGrR yk C 3: 79.4182 5( 5) R-K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] Occurences: 5(5) STP2_BOVIN : 99- 129: shskn RKNLEGKViKRKqvkRskQVYKrKrQSSGrK yn STP2_HUMAN : 106- 136: rcpkn RKNLEGKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_MOUSE : 85- 115: scpkn RKTFEGKVsKRKavrRrkRTHRaKrRTSGrR yk STP2_PIG : 105- 135: shskk RKNVEGKAnKRKgikRsqQVYKtKrRSSGrK yn STP2_RAT : 84- 114: scpkn RKTLEGKVsKRKavrRrkRTHRaKrRSSGrR yk D 4: 75.2482 5( 5) K-[NT]-[FLV]-E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] Occurences: 5(5) STP2_BOVIN : 100- 129: hsknr KNLEGKViKRKqvkRskQVYKrKrQSSGrK yn STP2_HUMAN : 107- 136: cpknr KNLEGKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_MOUSE : 86- 115: cpknr KTFEGKVsKRKavrRrkRTHRaKrRTSGrR yk STP2_PIG : 106- 135: hskkr KNVEGKAnKRKgikRsqQVYKtKrRSSGrK yn STP2_RAT : 85- 114: cpknr KTLEGKVsKRKavrRrkRTHRaKrRSSGrR yk E 5: 65.2339 5( 5) E-G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] Occurences: 5(5) STP2_BOVIN : 103- 129: nrknl EGKViKRKqvkRskQVYKrKrQSSGrK yn STP2_HUMAN : 110- 136: nrknl EGKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_MOUSE : 89- 115: nrktf EGKVsKRKavrRrkRTHRaKrRTSGrR yk STP2_PIG : 109- 135: krknv EGKAnKRKgikRsqQVYKtKrRSSGrK yn STP2_RAT : 88- 114: nrktl EGKVsKRKavrRrkRTHRaKrRSSGrR yk F 6: 61.0639 5( 5) G-K-[ALV]-x-K-[KR]-K-x(2,3)-R-x(2)-[QR]-[TV]-[HY]-[KR]-x-K-x-[QR]-[ST]-S-G-x-[KR] Occurences: 5(5) STP2_BOVIN : 104- 129: rknle GKViKRKqvkRskQVYKrKrQSSGrK yn STP2_HUMAN : 111- 136: rknle GKLkKKKmakRiqQVYKtKtRSSGwK sn STP2_MOUSE : 90- 115: rktfe GKVsKRKavrRrkRTHRaKrRTSGrR yk STP2_PIG : 110- 135: rknve GKAnKRKgikRsqQVYKtKrRSSGrK yn STP2_RAT : 89- 114: rktle GKVsKRKavrRrkRTHRaKrRSSGrR yk G 7: 55.9238 5( 5) T-x(3)-[RS]-[AL]-P-x(1,2)-H-x(3,4)-S-[NS]-S-x-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] Occurences: 5(5) STP2_BOVIN : 3- 32: md TktqSLPntHaqphSNSrPQSHAChhcScS qhcqs STP2_HUMAN : 3- 32: md TqthSLPitHtqlhSNSqPQSRTCtrhCqT fsqsc STP2_MOUSE : 3- 32: md TkmqSLPttHphphSSSrPQSHTSnqcNqC tcshh STP2_PIG : 3- 32: md TktqSLPnaHtqphSNSgPQSHACnqcScS hhcqn STP2_RAT : 5- 34: mggh TrrgRAPttHphphSSSrPQSHTNnqcAcS hhcrs H 8: 47.9856 5( 5) H-[APT]-x-[LP]-H-S-x(0,1)-S-x(1,2)-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] Occurences: 5(5) STP2_BOVIN : 12- 32: slpnt HAqPHSnSr-PQSHAChhcScS qhcqs STP2_HUMAN : 12- 32: slpit HTqLHSnSq-PQSRTCtrhCqT fsqsc STP2_MOUSE : 12- 32: slptt HPhPHSsSr-PQSHTSnqcNqC tcshh STP2_MOUSE : 12- 32: slptt HPhPHS-SsrPQSHTSnqcNqC tcshh STP2_PIG : 12- 32: slpna HTqPHSnSg-PQSHACnqcScS hhcqn STP2_RAT : 14- 34: raptt HPhPHSsSr-PQSHTNnqcAcS hhcrs STP2_RAT : 14- 34: raptt HPhPHS-SsrPQSHTNnqcAcS hhcrs I 9: 43.2019 8( 5) S-[QRS]-S-x(0,1)-S-x(0,1)-S-x(2)-P-x(2)-[HK]-[HR]-[NPS]-x-[PT]-[GPS]-x(2)-[GS]-[QRS] Occurences: 8(5) STP2_BOVIN : 46- 65: srscr SRS-S-SrrPrsHRSpTGhqGR arpqp STP2_HUMAN : 44- 65: qshrg SRSqSsSqsPasHRNpTGahSS sghqs STP2_HUMAN : 46- 65: hrgsr SQS-S-SqsPasHRNpTGahSS sghqs STP2_MOUSE : 49- 69: aghag SSS-SpSpgPpmKHPkPSvhSR hspar STP2_PIG : 49- 70: rsqsc SRSrSsSqsPtgHRSlPGhqSQ slsps STP2_PIG : 51- 70: qscsr SRS-S-SqsPtgHRSlPGhqSQ slsps STP2_RAT : 47- 68: qaghp SSSsSpSpgPptKHPkTPmhSR yspsr STP2_RAT : 48- 68: aghps SSS-SpSpgPptKHPkTPmhSR yspsr J 10: 39.5981 7( 5) P-x-[APT]-H-x(2,4)-S-x(1,3)-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] Occurences: 7(5) STP2_BOVIN : 9- 32: ktqsl PnTHaqphSnsrPQSHAChhcScS qhcqs STP2_HUMAN : 9- 32: qthsl PiTHtqlhSnsqPQSRTCtrhCqT fsqsc STP2_MOUSE : 9- 32: kmqsl PtTHphphSssrPQSHTSnqcNqC tcshh STP2_MOUSE : 13- 32: lptth PhPHss--Sr--PQSHTSnqcNqC tcshh STP2_PIG : 9- 32: ktqsl PnAHtqphSnsgPQSHACnqcScS hhcqn STP2_RAT : 11- 34: rrgra PtTHphphSssrPQSHTNnqcAcS hhcrs STP2_RAT : 15- 34: aptth PhPHss--Sr--PQSHTNnqcAcS hhcrs K 11: 37.9731 5( 5) H-S-x(0,1)-S-x(1,2)-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] Occurences: 5(5) STP2_BOVIN : 16- 32: thaqp HSnSr-PQSHAChhcScS qhcqs STP2_HUMAN : 16- 32: thtql HSnSq-PQSRTCtrhCqT fsqsc STP2_MOUSE : 16- 32: thphp HSsSr-PQSHTSnqcNqC tcshh STP2_MOUSE : 16- 32: thphp HS-SsrPQSHTSnqcNqC tcshh STP2_PIG : 16- 32: ahtqp HSnSg-PQSHACnqcScS hhcqn STP2_RAT : 18- 34: thphp HSsSr-PQSHTNnqcAcS hhcrs STP2_RAT : 18- 34: thphp HS-SsrPQSHTNnqcAcS hhcrs L 12: 37.9731 7( 5) H-x(3,4)-S-x(0,1)-S-x-P-Q-S-[HR]-[AT]-[CNS]-x(3)-[ACNS]-x-[CST] Occurences: 7(5) STP2_BOVIN : 12- 32: slpnt HaqphSnSrPQSHAChhcScS qhcqs STP2_HUMAN : 12- 32: slpit HtqlhSnSqPQSRTCtrhCqT fsqsc STP2_MOUSE : 12- 32: slptt HphphSsSrPQSHTSnqcNqC tcshh STP2_MOUSE : 14- 32: ptthp Hphs-S-SrPQSHTSnqcNqC tcshh STP2_PIG : 12- 32: slpna HtqphSnSgPQSHACnqcScS hhcqn STP2_RAT : 14- 34: raptt HphphSsSrPQSHTNnqcAcS hhcrs STP2_RAT : 16- 34: ptthp Hphs-S-SrPQSHTNnqcAcS hhcrs M 13: 36.7850 5( 5) C-x(2)-S-x(0,1)-H-x(3,4)-S-x-S-x-[ADS]-x(4)-[CS]-x-[RS]-[NRS]-x-[PST]-x-[AGS] Occurences: 5(5) STP2_BOVIN : 29- 55: hachh CscSqHcqsrSrSrScrsrSsSRrPrS hrspt STP2_HUMAN : 37- 62: tfsqs CrqS-HrgsrSqSsSqspaShRNpTgA hsssg STP2_MOUSE : 32- 56: nqcnq CtcS-Hhcr-ScSqAghagSsSSpSpG ppmkh STP2_PIG : 29- 55: hacnq CscShHcqncSqScDrsqsCsRSrSsS qsptg STP2_RAT : 31- 55: htnnq CacS-Hhcr-ScSqAghpsSsSSpSpG pptkh N 14: 35.3662 5( 5) S-S-S-x(1,2)-P-x-[GS]-H-x-[NS]-x-[PQT]-[CG]-x(2)-[CGS] Occurences: 5(5) STP2_BOVIN : 48- 64: scrsr SSSrrPrSHrSpTGhqG rarpq STP2_HUMAN : 48- 64: gsrsq SSSqsPaSHrNpTGahS ssghq STP2_MOUSE : 17- 32: hphph SSSr-PqSHtSnQCnqC tcshh STP2_PIG : 53- 69: csrsr SSSqsPtGHrSlPGhqS qslsp STP2_RAT : 19- 34: hphph SSSr-PqSHtNnQCacS hhcrs O 15: 34.6969 5( 5) C-[RS]-Q-x(4,5)-S-x(0,1)-S-x-S-x-[RS]-x(2)-[PS]-[APS]-x(3)-[NPT] Occurences: 5(5) STP2_BOVIN : 31- 53: chhcs CSQhcqsrSrSrScRsrSSsrrP rshrs STP2_HUMAN : 37- 58: tfsqs CRQshrg-SrSqSsSqsPAshrN ptgah STP2_MOUSE : 41- 62: hhcrs CSQaghagS-SsSpSpgPPmkhP kpsvh STP2_PIG : 38- 59: hhcqn CSQscdr-SqScSrSrsSSqspT ghrsl STP2_RAT : 40- 61: hhcrs CSQaghpsS-SsSpSpgPPtkhP ktpmh STP2_RAT : 40- 61: hhcrs CSQaghp-SsSsSpSpgPPtkhP ktpmh P 16: 33.1429 5( 5) K-x(2)-K-R-x(2,3)-V-x-[KR]-x-K-x(0,1)-R-[QST]-x(3)-[KR] Occurences: 5(5) STP2_BOVIN : 110- 128: kvikr KqvKRskqVyKrK-RQssgR kyn STP2_HUMAN : 117- 136: klkkk KmaKRiqqVyKtKtRSsgwK sn STP2_MOUSE : 91- 108: ktfeg KvsKRka-VrRrK-RThraK rrtsg STP2_PIG : 116- 135: kankr KgiKRsqqVyKtKrRSsgrK yn STP2_RAT : 90- 107: ktleg KvsKRka-VrRrK-RThraK rrssg Q 17: 28.8645 6( 5) S-x(0,1)-S-x(0,1)-S-S-x-[RS]-P-x-[GPS]-x(4)-[PT] Occurences: 6(5) STP2_BOVIN : 46- 60: srscr SrS-SSrRPrShrspT ghqgr STP2_HUMAN : 46- 60: hrgsr SqS-SSqSPaShrnpT gahss STP2_MOUSE : 49- 62: aghag S-S-SSpSPgPpmkhP kpsvh STP2_PIG : 51- 65: qscsr SrS-SSqSPtGhrslP ghqsq STP2_RAT : 47- 61: qaghp SsS-SSpSPgPptkhP ktpmh STP2_RAT : 47- 61: qaghp S-SsSSpSPgPptkhP ktpmh STP2_RAT : 48- 61: aghps S-S-SSpSPgPptkhP ktpmh R 18: 25.6453 6( 5) S-x(0,1)-S-S-S-x(1,2)-P-x-[GPS]-x(4)-[PT] Occurences: 6(5) STP2_BOVIN : 46- 60: srscr SrSSSrrPrShrspT ghqgr STP2_HUMAN : 46- 60: hrgsr SqSSSqsPaShrnpT gahss STP2_MOUSE : 49- 62: aghag S-SSSpsPgPpmkhP kpsvh STP2_PIG : 51- 65: qscsr SrSSSqsPtGhrslP ghqsq STP2_RAT : 47- 61: qaghp SsSSSpsPgPptkhP ktpmh STP2_RAT : 48- 61: aghps S-SSSpsPgPptkhP ktpmh S 19: 23.0257 5( 5) C-[ST]-x-H-C-x(1,3)-S-x-S Occurences: 5(5) STP2_BOVIN : 31- 39: chhcs CSqHCq--SrS rsrsc STP2_BOVIN : 31- 41: chhcs CSqHCqsrSrS rscrs STP2_HUMAN : 26- 36: pqsrt CTrHCqtfSqS crqsh STP2_MOUSE : 34- 42: cnqct CShHCr--ScS qagha STP2_PIG : 31- 41: cnqcs CShHCqncSqS cdrsq STP2_RAT : 33- 41: nnqca CShHCr--ScS qaghp T 20: 19.8503 9( 5) S-x-S-x(0,1)-S-x(0,1)-S-x(2)-P Occurences: 9(5) STP2_BOVIN : 46- 53: srscr SrS-S-SrrP rshrs STP2_HUMAN : 44- 53: qshrg SrSqSsSqsP ashrn STP2_HUMAN : 46- 53: hrgsr SqS-S-SqsP ashrn STP2_MOUSE : 49- 57: aghag SsS-SpSpgP pmkhp STP2_PIG : 49- 58: rsqsc SrSrSsSqsP tghrs STP2_PIG : 51- 58: qscsr SrS-S-SqsP tghrs STP2_PIG : 69- 78: lpghq SqSlSpSpsP rhrkr STP2_RAT : 47- 54: qaghp SsS-S-SpsP gpptk STP2_RAT : 47- 56: qaghp SsSsSpSpgP ptkhp STP2_RAT : 48- 56: aghps SsS-SpSpgP ptkhp Number of patterns evaluated by Pratt:2688 Total running time: 0 seconds