------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 31 sequences from file TNF PATTERN CONSERVATION: CM: min Nr of Seqs to Match 31 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename TNF.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: 41BL_HUMAN 254 41BL_MOUSE 309 CD2L_HUMAN 193 CD3L_HUMAN 234 CD3L_MOUSE 239 CD4L_HUMAN 261 CD4L_MOUSE 260 FASL_MOUSE 279 FASL_RAT 278 OX4L_HUMAN 183 OX4L_MOUSE 198 TNFA_BOVIN 233 TNFA_CAPHI 193 TNFA_FELCA 233 TNFA_HORSE 234 TNFA_HUMAN 233 TNFA_MOUSE 235 TNFA_PAPSP 233 TNFA_PERLE 235 TNFA_PIG 232 TNFA_RABIT 235 TNFA_RAT 235 TNFA_SHEEP 234 TNFB_BOVIN 204 TNFB_HUMAN 205 TNFB_MOUSE 202 TNFB_PIG 204 TNFB_RABIT 197 TNFB_RAT 202 TNFC_HUMAN 244 TNFC_MOUSE 306 Pratt run started at Thu Feb 6 21:27:11 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 47( 31) V-x(2,4)-G-L 2: 11.0102 55( 31) V-x(2,4)-G-x(0,1)-L 3: 10.5102 59( 31) L-x(2,4)-D-x(1,3)-L 4: 10.5102 85( 31) L-x(1,3)-A-x(1,3)-L 5: 10.5102 92( 31) L-x(0,2)-L-x(2,4)-A 6: 8.3401 72( 31) G-x(4)-L 7: 8.3401 121( 31) L-x(5)-G 8: 8.3401 151( 31) L-x-L 9: 8.3401 73( 31) L-x-V 10: 8.3401 103( 31) V-x-L 11: 8.3401 50( 31) L-T 12: 8.3401 112( 31) L-x(2)-A 13: 8.3401 127( 31) L-x(4)-S 14: 8.3401 78( 31) Q-L 15: 8.3401 40( 31) G-x-Y 16: 8.3401 126( 31) L-x(4)-L 17: 8.3401 90( 31) G-L 18: 8.3401 133( 31) L-x(3)-L 19: 8.3401 82( 31) L-V 20: 7.8401 141( 31) V-x(0,1)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 15.6419 31( 31) G-[FILMV]-Y-x-[ILV]-x(3)-[GLV] B 2: 11.5102 47( 31) V-x(2,4)-G-L C 3: 11.0396 43( 31) G-L-x-[FIL] D 4: 11.0102 55( 31) V-x(2,4)-G-x(0,1)-L E 5: 10.5235 56( 31) L-x-[AGSV]-A F 6: 10.5102 59( 31) L-x(2,4)-D-x(1,3)-L G 7: 10.5102 85( 31) L-x(1,3)-A-x(1,3)-L H 8: 10.5102 92( 31) L-x(0,2)-L-x(2,4)-A I 9: 9.2729 99( 31) V-x(0,1)-L-x(2)-[AEGNQST] J 10: 8.3401 72( 31) G-x(4)-L K 11: 8.3401 121( 31) L-x(5)-G L 12: 8.3401 151( 31) L-x-L M 13: 8.3401 73( 31) L-x-V N 14: 8.3401 103( 31) V-x-L O 15: 8.3401 50( 31) L-T P 16: 8.3401 127( 31) L-x(4)-S Q 17: 8.3401 78( 31) Q-L R 18: 8.3401 126( 31) L-x(4)-L S 19: 8.3401 133( 31) L-x(3)-L T 20: 8.3401 82( 31) L-V Best patterns with alignements: fitness hits(seqs) Pattern A 1: 15.6419 31( 31) G-[FILMV]-Y-x-[ILV]-x(3)-[GLV] Occurences: 31(31) 41BL_HUMAN : 139- 147: vvaka GVYyVffqL elrrv 41BL_MOUSE : 196- 204: vvdsp GLYyVfleL klspt CD2L_HUMAN : 102- 110: rihrd GIYmVhiqV tlaic CD3L_HUMAN : 137- 145: viqfp GLYfIicqL qflvq CD3L_MOUSE : 142- 150: ivqfp GLYfIvcqL qflvq CD4L_HUMAN : 167- 175: tvkrq GLYyIyaqV tfcsn CD4L_MOUSE : 166- 174: tvkre GLYyVytqV tfcsn FASL_MOUSE : 185- 193: vinet GLYfVyskV yfrgq FASL_RAT : 184- 192: vinea GLYfVyskV yfrgq OX4L_HUMAN : 99- 107: iincd GFYlIslkG yfsqe OX4L_MOUSE : 100- 108: vikcd GLYiIylkG sffqe TNFA_BOVIN : 130- 138: vvpad GLYlIysqV lfrgq TNFA_CAPHI : 91- 99: vvptd GLYlIysqV lfrgh TNFA_FELCA : 130- 138: kvpsd GLYlIysqV lftgq TNFA_HORSE : 131- 139: vvpld GLYlIysqV lfkgq TNFA_HUMAN : 130- 138: vvpse GLYlIysqV lfkgq TNFA_MOUSE : 133- 141: vvpad GLYlVysqV lfkgq TNFA_PAPSP : 130- 138: vvpse GLYlIysqV lfkgq TNFA_PERLE : 133- 141: vipad GLYlVysqV lfkgq TNFA_PIG : 129- 137: vvptd GLYlIysqV lfrgq TNFA_RABIT : 133- 141: vvpad GLYlIysqV lfsgq TNFA_RAT : 133- 141: vvpad GLYlIysqV lfkgq TNFA_SHEEP : 131- 139: vvptd GLYlIysqV lfrgh TNFB_BOVIN : 104- 112: lvpts GLYfVysqV vfsgr TNFB_HUMAN : 105- 113: lvpts GIYfVysqV vfsgk TNFB_MOUSE : 102- 110: lipts GLYfVysqV vfsge TNFB_PIG : 104- 112: lvpts GLYfVysqV vfsge TNFB_RABIT : 97- 105: lvpss GLYfVysqV vfsge TNFB_RAT : 102- 110: lipts GLYfVysqV vfsge TNFC_HUMAN : 131- 139: alpqd GLYyLyclV gyrgr TNFC_MOUSE : 197- 205: alpqd GVYyLychV gyrgr B 2: 11.5102 47( 31) V-x(2,4)-G-L Occurences: 47(31) 41BL_HUMAN : 118- 124: pglag VsltgGL syked 41BL_MOUSE : 191- 197: dkkel VvdspGL yyvfl 41BL_MOUSE : 192- 197: kkelv Vdsp-GL yyvfl CD2L_HUMAN : 24- 30: lraal VplvaGL viclv CD3L_HUMAN : 132- 138: qdgnl ViqfpGL yfiic CD3L_MOUSE : 138- 143: dgnli Vqfp-GL yfivc CD4L_HUMAN : 163- 168: gkqlt Vkrq-GL yyiya CD4L_MOUSE : 13- 17: psprs Vat--GL pasmk CD4L_MOUSE : 162- 167: gkqlt Vkre-GL yyvyt FASL_MOUSE : 93- 97: vlval Vgm--GL gmyql FASL_MOUSE : 180- 186: kkggl VinetGL yfvys FASL_RAT : 92- 96: vlval Vgm--GL gmyql FASL_RAT : 179- 185: kkggl VineaGL yfvys OX4L_HUMAN : 30- 34: llvas Viq--GL glllc OX4L_HUMAN : 30- 36: llvas ViqglGL llcft OX4L_MOUSE : 95- 101: qnnsv VikcdGL yiiyl TNFA_BOVIN : 125- 131: ednql VvpadGL yliys TNFA_BOVIN : 126- 131: dnqlv Vpad-GL yliys TNFA_CAPHI : 86- 92: kdnql VvptdGL yliys TNFA_CAPHI : 87- 92: dnqlv Vptd-GL yliys TNFA_FELCA : 126- 131: dnqlk Vpsd-GL yliys TNFA_HORSE : 126- 132: tdnql VvpldGL yliys TNFA_HORSE : 127- 132: dnqlv Vpld-GL yliys TNFA_HUMAN : 125- 131: rdnql VvpseGL yliys TNFA_HUMAN : 126- 131: dnqlv Vpse-GL yliys TNFA_MOUSE : 128- 134: kdnql VvpadGL ylvys TNFA_MOUSE : 129- 134: dnqlv Vpad-GL ylvys TNFA_PAPSP : 125- 131: rdnql VvpseGL yliys TNFA_PAPSP : 126- 131: dnqlv Vpse-GL yliys TNFA_PERLE : 128- 134: kdnql VipadGL ylvys TNFA_PIG : 124- 130: kdnql VvptdGL yliys TNFA_PIG : 125- 130: dnqlv Vptd-GL yliys TNFA_RABIT : 128- 134: tdnql VvpadGL yliys TNFA_RABIT : 129- 134: dnqlv Vpad-GL yliys TNFA_RAT : 128- 134: kdnql VvpadGL yliys TNFA_RAT : 129- 134: dnqlv Vpad-GL yliys TNFA_SHEEP : 126- 132: kdnql VvptdGL yliys TNFA_SHEEP : 127- 132: dnqlv Vptd-GL yliys TNFB_BOVIN : 100- 105: nnsll Vpts-GL yfvys TNFB_HUMAN : 155- 159: ssqkm Vyp--GL qepwl TNFB_MOUSE : 18- 23: lgtpp Vfll-GL llalp TNFB_MOUSE : 152- 156: saqks Vyp--GL qgpwv TNFB_PIG : 100- 105: nnsll Vpts-GL yfvys TNFB_RABIT : 93- 98: nnsll Vpss-GL yfvys TNFB_RAT : 18- 23: lstpp Vfll-GL llalp TNFB_RAT : 152- 156: saqks Vyp--GL qgpwv TNFC_HUMAN : 205- 210: lwyts Vgfg-GL vqlrr TNFC_MOUSE : 267- 272: lwyts Vgfg-GL aqlrs C 3: 11.0396 43( 31) G-L-x-[FIL] Occurences: 43(31) 41BL_HUMAN : 34- 37: walva GLlL lllla 41BL_MOUSE : 298- 301: nttsf GLfL vkpdn CD2L_HUMAN : 29- 32: vplva GLvI clvvc CD3L_HUMAN : 137- 140: viqfp GLyF iicql CD3L_MOUSE : 142- 145: ivqfp GLyF ivcql CD4L_HUMAN : 16- 19: rsaat GLpI smkif CD4L_MOUSE : 191- 194: rpfiv GLwL kpsig FASL_MOUSE : 178- 181: kykkg GLvI netgl FASL_MOUSE : 185- 188: vinet GLyF vyskv FASL_RAT : 177- 180: kykkg GLvI neagl FASL_RAT : 184- 187: vinea GLyF vyskv OX4L_HUMAN : 33- 36: asviq GLgL llcft OX4L_HUMAN : 35- 38: viqgl GLlL cftyi OX4L_MOUSE : 100- 103: vikcd GLyI iylkg TNFA_BOVIN : 130- 133: vvpad GLyL iysqv TNFA_CAPHI : 91- 94: vvptd GLyL iysqv TNFA_FELCA : 66- 69: eelph GLqL inplp TNFA_FELCA : 130- 133: kvpsd GLyL iysqv TNFA_HORSE : 131- 134: vvpld GLyL iysqv TNFA_HUMAN : 130- 133: vvpse GLyL iysqv TNFA_MOUSE : 67- 70: ekfpn GLpL issma TNFA_MOUSE : 133- 136: vvpad GLyL vysqv TNFA_PAPSP : 130- 133: vvpse GLyL iysqv TNFA_PERLE : 133- 136: vipad GLyL vysqv TNFA_PIG : 129- 132: vvptd GLyL iysqv TNFA_RABIT : 133- 136: vvpad GLyL iysqv TNFA_RAT : 67- 70: ekfpn GLpL issma TNFA_RAT : 133- 136: vvpad GLyL iysqv TNFA_SHEEP : 131- 134: vvptd GLyL iysqv TNFB_BOVIN : 22- 25: pllll GLlL alple TNFB_BOVIN : 104- 107: lvpts GLyF vysqv TNFB_HUMAN : 23- 26: hllll GLlL vllpg TNFB_MOUSE : 22- 25: pvfll GLlL alplg TNFB_MOUSE : 102- 105: lipts GLyF vysqv TNFB_PIG : 22- 25: illll GLlL alppe TNFB_PIG : 104- 107: lvpts GLyF vysqv TNFB_RABIT : 14- 17: lplll GLlL apppp TNFB_RABIT : 97- 100: lvpss GLyF vysqv TNFB_RAT : 22- 25: pvfll GLlL alplg TNFB_RAT : 102- 105: lipts GLyF vysqv TNFC_HUMAN : 68- 71: aqaqq GLgF qklpe TNFC_HUMAN : 124- 127: fsdae GLaL pqdgl TNFC_MOUSE : 190- 193: fspth GLaL pqdgv D 4: 11.0102 55( 31) V-x(2,4)-G-x(0,1)-L Occurences: 55(31) 41BL_HUMAN : 100- 107: lvaqn VllidGpL swysd 41BL_HUMAN : 118- 124: pglag VsltgG-L syked 41BL_HUMAN : 118- 124: pglag Vslt-GgL syked 41BL_MOUSE : 191- 197: dkkel VvdspG-L yyvfl 41BL_MOUSE : 192- 197: kkelv Vdsp-G-L yyvfl CD2L_HUMAN : 24- 30: lraal VplvaG-L viclv CD3L_HUMAN : 124- 131: gilhg VryqdGnL viqfp CD3L_HUMAN : 132- 138: qdgnl ViqfpG-L yfiic CD3L_MOUSE : 138- 143: dgnli Vqfp-G-L yfivc CD4L_HUMAN : 163- 168: gkqlt Vkrq-G-L yyiya CD4L_MOUSE : 13- 17: psprs Vat--G-L pasmk CD4L_MOUSE : 162- 167: gkqlt Vkre-G-L yyvyt FASL_MOUSE : 93- 97: vlval Vgm--G-L gmyql FASL_MOUSE : 172- 179: alisg VkykkGgL vinet FASL_MOUSE : 180- 186: kkggl VinetG-L yfvys FASL_RAT : 92- 96: vlval Vgm--G-L gmyql FASL_RAT : 171- 178: alisg VkykkGgL vinea FASL_RAT : 179- 185: kkggl VineaG-L yfvys OX4L_HUMAN : 30- 34: llvas Viq--G-L glllc OX4L_HUMAN : 30- 36: llvas ViqglG-L llcft OX4L_HUMAN : 30- 37: llvas ViqglGlL lcfty OX4L_HUMAN : 165- 170: lddfh Vng--GeL ilihq OX4L_MOUSE : 95- 101: qnnsv VikcdG-L yiiyl TNFA_BOVIN : 125- 131: ednql VvpadG-L yliys TNFA_BOVIN : 126- 131: dnqlv Vpad-G-L yliys TNFA_CAPHI : 86- 92: kdnql VvptdG-L yliys TNFA_CAPHI : 87- 92: dnqlv Vptd-G-L yliys TNFA_FELCA : 126- 131: dnqlk Vpsd-G-L yliys TNFA_HORSE : 126- 132: tdnql VvpldG-L yliys TNFA_HORSE : 127- 132: dnqlv Vpld-G-L yliys TNFA_HUMAN : 125- 131: rdnql VvpseG-L yliys TNFA_HUMAN : 126- 131: dnqlv Vpse-G-L yliys TNFA_MOUSE : 128- 134: kdnql VvpadG-L ylvys TNFA_MOUSE : 129- 134: dnqlv Vpad-G-L ylvys TNFA_PAPSP : 125- 131: rdnql VvpseG-L yliys TNFA_PAPSP : 126- 131: dnqlv Vpse-G-L yliys TNFA_PERLE : 128- 134: kdnql VipadG-L ylvys TNFA_PIG : 95- 101: hvvan Vkae-GqL qwqsg TNFA_PIG : 124- 130: kdnql VvptdG-L yliys TNFA_PIG : 125- 130: dnqlv Vptd-G-L yliys TNFA_RABIT : 10- 17: smird VelaeGpL pkkag TNFA_RABIT : 128- 134: tdnql VvpadG-L yliys TNFA_RABIT : 129- 134: dnqlv Vpad-G-L yliys TNFA_RAT : 128- 134: kdnql VvpadG-L yliys TNFA_RAT : 129- 134: dnqlv Vpad-G-L yliys TNFA_SHEEP : 126- 132: kdnql VvptdG-L yliys TNFA_SHEEP : 127- 132: dnqlv Vptd-G-L yliys TNFB_BOVIN : 100- 105: nnsll Vpts-G-L yfvys TNFB_HUMAN : 155- 159: ssqkm Vyp--G-L qepwl TNFB_MOUSE : 18- 23: lgtpp Vfll-G-L llalp TNFB_MOUSE : 18- 24: lgtpp Vfll-GlL lalpl TNFB_MOUSE : 152- 156: saqks Vyp--G-L qgpwv TNFB_PIG : 100- 105: nnsll Vpts-G-L yfvys TNFB_RABIT : 93- 98: nnsll Vpss-G-L yfvys TNFB_RAT : 18- 23: lstpp Vfll-G-L llalp TNFB_RAT : 18- 24: lstpp Vfll-GlL lalpl TNFB_RAT : 152- 156: saqks Vyp--G-L qgpwv TNFC_HUMAN : 47- 54: avlal VpqdqGgL vteta TNFC_HUMAN : 205- 210: lwyts Vgfg-G-L vqlrr TNFC_HUMAN : 205- 210: lwyts Vgf--GgL vqlrr TNFC_MOUSE : 267- 272: lwyts Vgfg-G-L aqlrs TNFC_MOUSE : 267- 272: lwyts Vgf--GgL aqlrs E 5: 10.5235 56( 31) L-x-[AGSV]-A Occurences: 56(31) 41BL_HUMAN : 40- 43: lllll LlAA acavf 41BL_HUMAN : 41- 44: lllll LaAA cavfl 41BL_HUMAN : 133- 136: edtke LvVA kagvy 41BL_HUMAN : 170- 173: lhlqp LrSA agaaa 41BL_MOUSE : 94- 97: lvlll LiAA cvpif 41BL_MOUSE : 277- 280: glray LhGA qdayr CD2L_HUMAN : 19- 22: pygcv LrAA lvplv CD3L_HUMAN : 102- 105: ksway LqVA khlnk CD3L_MOUSE : 55- 58: talvc LvVA vaiil CD4L_HUMAN : 206- 209: feril LrAA nthss CD4L_MOUSE : 205- 208: seril LkAA nthss FASL_MOUSE : 249- 252: gavfn LtSA dhlyv FASL_RAT : 248- 251: gavfn LtVA dhlyv OX4L_HUMAN : 25- 28: ernkl LlVA sviqg OX4L_HUMAN : 138- 141: rsvns LmVA sltyk OX4L_MOUSE : 63- 66: ppiqr LrGA vtrce TNFA_BOVIN : 39- 42: slfsf LlVA gattl TNFA_CAPHI : 9- 12: shhal LpAA lrgnr TNFA_FELCA : 39- 42: slfsf LlVA gattl TNFA_FELCA : 169- 172: qtkvn LlSA ikspc TNFA_HORSE : 39- 42: slfsf LlVA gattl TNFA_HORSE : 170- 173: pskvn LlSA ikspc TNFA_HUMAN : 39- 42: slfsf LiVA gattl TNFA_HUMAN : 169- 172: qtkvn LlSA ikspc TNFA_MOUSE : 39- 42: slfsf LlVA gattl TNFA_MOUSE : 171- 174: qekvn LlSA vkspc TNFA_PAPSP : 39- 42: slfsf LlVA gattl TNFA_PAPSP : 169- 172: qtkvn LlSA ikspc TNFA_PERLE : 39- 42: slfsf LlVA gattl TNFA_PERLE : 171- 174: edkvn LlSA ikspc TNFA_PIG : 39- 42: slfsf LlVA gattl TNFA_PIG : 168- 171: qtkvn LlSA ikspc TNFA_RABIT : 39- 42: slfsf LlVA gattl TNFA_RABIT : 80- 83: aqmvt LrSA srals TNFA_RABIT : 171- 174: pnkvn LlSA ikspc TNFA_RAT : 39- 42: slfsf LlVA gattl TNFA_RAT : 171- 174: qekvs LlSA ikspc TNFA_RAT : 209- 212: lekgd LlSA evnlp TNFA_SHEEP : 39- 42: slfsf LlVA gattl TNFA_SHEEP : 183- 186: chret LeGA eakpw TNFB_BOVIN : 147- 150: pfhvp LlSA qksvc TNFB_HUMAN : 29- 32: lllvl LpGA qglpg TNFB_MOUSE : 145- 148: pfhvp LlSA qksvy TNFB_PIG : 147- 150: pfhvp LlSA qksvc TNFB_RABIT : 27- 30: pgaqg LpGA efpps TNFB_RABIT : 140- 143: sfhvp LlSA qksvc TNFB_RAT : 145- 148: pfhvp LlSA qksvy TNFC_HUMAN : 21- 24: rgsll LaVA gatsl TNFC_HUMAN : 87- 90: dlspg LpAA hliga TNFC_HUMAN : 92- 95: lpaah LiGA plkgq TNFC_HUMAN : 179- 182: tpell LeGA etvtp TNFC_MOUSE : 21- 24: rgcll LaVA gatsl TNFC_MOUSE : 153- 156: dlnpe LpAA hliga TNFC_MOUSE : 158- 161: lpaah LiGA wmsgq TNFC_MOUSE : 224- 227: arslt LrSA lyrag TNFC_MOUSE : 244- 247: spell LeGA etvtp F 6: 10.5102 59( 31) L-x(2,4)-D-x(1,3)-L Occurences: 59(31) 41BL_HUMAN : 76- 84: regpe Lspd-DpagL ldlrq 41BL_HUMAN : 101- 107: vaqnv Lli--Dgp-L swysd 41BL_HUMAN : 107- 115: lidgp LswysDpg-L agvsl 41BL_HUMAN : 124- 133: sltgg LsykeDtkeL vvaka 41BL_MOUSE : 28- 34: psdaa Llr--Dtg-L ladaa 41BL_MOUSE : 28- 35: psdaa Llr--DtglL adaal 41BL_MOUSE : 34- 40: lrdtg Lla--Daa-L lsdtv 41BL_MOUSE : 34- 41: lrdtg Lla--DaalL sdtvr 41BL_MOUSE : 181- 190: ylsqg LryeeDkkeL vvdsp 41BL_MOUSE : 190- 197: edkke Lvv--DspgL yyvfl CD2L_HUMAN : 53- 60: lples Lgw--DvaeL qlnht CD2L_HUMAN : 161- 167: qrltp Larg-Dt--L ctnlt CD3L_HUMAN : 113- 121: lnktk LswnkDgi-L hgvry CD3L_MOUSE : 129- 136: gtihg Liyq-Dgn-L ivqfp CD4L_HUMAN : 50- 59: ylhrr LdkieDernL hedfv CD4L_MOUSE : 94- 100: rqfed Lvk--Dit-L nkeek FASL_MOUSE : 249- 255: gavfn Ltsa-Dh--L yvnis FASL_RAT : 70- 78: pplsp Lkkk-DnieL wlpvi FASL_RAT : 248- 254: gavfn Ltva-Dh--L yvnis OX4L_HUMAN : 117- 126: evnis LhyqkDeepL fqlkk OX4L_HUMAN : 143- 151: lmvas Ltyk-DkvyL nvttd OX4L_HUMAN : 151- 160: kdkvy LnvttDntsL ddfhv OX4L_MOUSE : 146- 154: tvvas Lafk-DkvyL tvnap OX4L_MOUSE : 166- 173: tlceh Lqin-Dge-L ivvql TNFA_BOVIN : 124- 131: lednq LvvpaDg--L yliys TNFA_BOVIN : 124- 133: lednq LvvpaDglyL iysqv TNFA_BOVIN : 202- 208: ggvfq Lekg-Dr--L saein TNFA_CAPHI : 85- 92: lkdnq LvvptDg--L yliys TNFA_CAPHI : 85- 94: lkdnq LvvptDglyL iysqv TNFA_CAPHI : 162- 168: ggvfq Lekg-Dr--L saein TNFA_FELCA : 124- 131: ltdnq LkvpsDg--L yliys TNFA_FELCA : 124- 133: ltdnq LkvpsDglyL iysqv TNFA_FELCA : 202- 208: ggvfq Lekg-Dr--L stein TNFA_HORSE : 125- 132: ltdnq LvvplDg--L yliys TNFA_HORSE : 125- 134: ltdnq LvvplDglyL iysqv TNFA_HORSE : 203- 209: ggvfq Lekg-Dq--L saein TNFA_HUMAN : 202- 208: ggvfq Lekg-Dr--L saein TNFA_MOUSE : 127- 134: lkdnq LvvpaDg--L ylvys TNFA_MOUSE : 127- 136: lkdnq LvvpaDglyL vysqv TNFA_MOUSE : 204- 210: ggvfq Lekg-Dq--L saevn TNFA_PAPSP : 202- 208: ggvfq Lekg-Dr--L saein TNFA_PERLE : 127- 134: lkdnq LvipaDg--L ylvys TNFA_PERLE : 127- 136: lkdnq LvipaDglyL vysqv TNFA_PERLE : 204- 210: ggvfq Lekg-Dr--L saevn TNFA_PIG : 123- 130: lkdnq LvvptDg--L yliys TNFA_PIG : 123- 132: lkdnq LvvptDglyL iysqv TNFA_PIG : 201- 207: ggvfq Lekd-Dr--L saein TNFA_PIG : 201- 207: ggvfq Lek--Ddr-L saein TNFA_RABIT : 127- 134: ltdnq LvvpaDg--L yliys TNFA_RABIT : 127- 136: ltdnq LvvpaDglyL iysqv TNFA_RABIT : 204- 210: ggvfq Lekg-Dr--L stevn TNFA_RAT : 127- 134: lkdnq LvvpaDg--L yliys TNFA_RAT : 127- 136: lkdnq LvvpaDglyL iysqv TNFA_RAT : 204- 210: ggvfq Lekg-Dl--L saevn TNFA_SHEEP : 125- 132: lkdnq LvvptDg--L yliys TNFA_SHEEP : 125- 134: lkdnq LvvptDglyL iysqv TNFA_SHEEP : 203- 209: ggvfq Lekg-Dr--L saein TNFB_BOVIN : 173- 180: qgavf LltrgDq--L sthtd TNFB_BOVIN : 174- 180: gavfl Ltrg-Dq--L sthtd TNFB_HUMAN : 175- 181: gaafq Ltqg-Dq--L sthtd TNFB_MOUSE : 171- 178: qgavf LlskgDq--L sthtd TNFB_MOUSE : 172- 178: gavfl Lskg-Dq--L sthtd TNFB_PIG : 173- 180: qgavf LltqgDq--L sthtd TNFB_PIG : 174- 180: gavfl Ltqg-Dq--L sthtd TNFB_RABIT : 166- 173: qgavf LltqgDq--L sthtd TNFB_RABIT : 167- 173: gavfl Ltqg-Dq--L sthtd TNFB_RAT : 171- 178: qgavf LlskgDq--L sthtd TNFB_RAT : 172- 178: gavfl Lskg-Dq--L sthtd TNFC_HUMAN : 46- 54: lavla Lvpq-DqggL vteta TNFC_HUMAN : 125- 132: sdaeg LalpqDg--L yylyc TNFC_HUMAN : 127- 132: aegla Lpq--Dg--L yylyc TNFC_MOUSE : 84- 92: pspss LsetpDpr-L hpqrs G 7: 10.5102 85( 31) L-x(1,3)-A-x(1,3)-L Occurences: 85(31) 41BL_HUMAN : 31- 35: vlpwa Lv--Ag--L lllll 41BL_HUMAN : 31- 36: vlpwa Lv--Agl-L lllll 41BL_HUMAN : 31- 37: vlpwa Lv--AgllL lllla 41BL_HUMAN : 95- 101: gmfaq Lv--AqnvL lidgp 41BL_HUMAN : 204- 212: fqgrl LhlsAgqrL gvhlh 41BL_HUMAN : 206- 212: grllh Ls--AgqrL gvhlh 41BL_HUMAN : 228- 235: rhawq LtqgAtv-L glfrv 41BL_MOUSE : 34- 40: lrdtg LladAa--L lsdtv 41BL_MOUSE : 34- 41: lrdtg LladAal-L sdtvr 41BL_MOUSE : 34- 40: lrdtg Ll--AdaaL lsdtv 41BL_MOUSE : 35- 40: rdtgl Lad-Aa--L lsdtv 41BL_MOUSE : 35- 41: rdtgl LadaAl--L sdtvr 41BL_MOUSE : 35- 41: rdtgl Lad-Aal-L sdtvr 41BL_MOUSE : 86- 91: pklyg Lv--Alv-L lllia 41BL_MOUSE : 86- 92: pklyg Lv--AlvlL lliaa 41BL_MOUSE : 261- 269: swsql LllkAghrL svglr 41BL_MOUSE : 262- 269: wsqll Llk-AghrL svglr 41BL_MOUSE : 263- 269: sqlll Lk--AghrL svglr 41BL_MOUSE : 273- 277: rlsvg Lr--Ay--L hgaqd CD2L_HUMAN : 19- 23: pygcv Lr--Aa--L vplva CD2L_HUMAN : 19- 26: pygcv Lra-AlvpL vaglv CD2L_HUMAN : 26- 30: aalvp Lv--Ag--L viclv CD3L_HUMAN : 41- 46: rsyfy Ltt-At--L alclv CD3L_HUMAN : 41- 48: rsyfy Ltt-AtlaL clvft CD3L_HUMAN : 102- 108: ksway Lqv-Akh-L nktkl CD3L_MOUSE : 47- 55: rsyfy LsttAlvcL vvava CD4L_HUMAN : 41- 46: migsa Lf--Avy-L hrrld CD4L_MOUSE : 41- 46: migsv Lf--Avy-L hrrld FASL_MOUSE : 243- 249: ahssy Lg--AvfnL tsadh FASL_MOUSE : 249- 255: gavfn Lts-Adh-L yvnis FASL_RAT : 242- 248: ahssy Lg--AvfnL tvadh FASL_RAT : 248- 254: gavfn Ltv-Adh-L yvnis OX4L_HUMAN : 138- 143: rsvns Lmv-As--L tykdk OX4L_MOUSE : 154- 162: kdkvy LtvnApdtL cehlq TNFA_BOVIN : 40- 47: lfsfl LvagAtt-L fcllh TNFA_BOVIN : 124- 131: lednq LvvpAdg-L yliys TNFA_BOVIN : 208- 214: ekgdr Ls--AeinL pdyld TNFA_CAPHI : 8- 13: rshha Llp-Aa--L rgnrp TNFA_CAPHI : 9- 13: shhal Lp--Aa--L rgnrp TNFA_FELCA : 40- 47: lfsfl LvagAtt-L fcllh TNFA_FELCA : 105- 112: gqlqr LsrrAna-L langv TNFA_FELCA : 105- 113: gqlqr LsrrAnalL angve TNFA_FELCA : 214- 218: stein Lp--Ay--L dfaes TNFA_HORSE : 40- 47: lfsfl LvagAtt-L fcllh TNFA_HORSE : 106- 113: gqlqw LsgrAna-L langv TNFA_HORSE : 106- 114: gqlqw LsgrAnalL angvk TNFA_HUMAN : 105- 112: gqlqw LnrrAna-L langv TNFA_HUMAN : 105- 113: gqlqw LnrrAnalL angve TNFA_MOUSE : 40- 47: lfsfl LvagAtt-L fclln TNFA_MOUSE : 108- 115: eqlew LsqrAna-L langm TNFA_MOUSE : 108- 116: eqlew LsqrAnalL angmd TNFA_MOUSE : 127- 134: lkdnq LvvpAdg-L ylvys TNFA_MOUSE : 210- 216: ekgdq Ls--AevnL pkyld TNFA_PAPSP : 40- 47: lfsfl LvagAtt-L fcllh TNFA_PAPSP : 105- 112: gqlqw LnrrAna-L langv TNFA_PAPSP : 105- 113: gqlqw LnrrAnalL angve TNFA_PAPSP : 208- 214: ekgdr Ls--AeinL pdyld TNFA_PERLE : 40- 47: lfsfl LvagAtt-L fclln TNFA_PERLE : 108- 115: eqlew LsrgAna-L langm TNFA_PERLE : 108- 116: eqlew LsrgAnalL angmd TNFA_PERLE : 127- 134: lkdnq LvipAdg-L ylvys TNFA_PERLE : 210- 216: ekgdr Ls--AevnL pkyld TNFA_PIG : 40- 47: lfsfl LvagAtt-L fcllh TNFA_PIG : 207- 213: ekddr Ls--AeinL pdyld TNFA_RABIT : 40- 47: lfsfl LvagAtt-L fcllh TNFA_RABIT : 80- 87: aqmvt Lrs-AsraL sdkpl TNFA_RABIT : 108- 115: gqlqw LsqrAna-L langm TNFA_RABIT : 108- 116: gqlqw LsqrAnalL angmk TNFA_RABIT : 127- 134: ltdnq LvvpAdg-L yliys TNFA_RAT : 40- 47: lfsfl LvagAtt-L fclln TNFA_RAT : 108- 115: eqlew LsqrAna-L langm TNFA_RAT : 108- 116: eqlew LsqrAnalL angmd TNFA_RAT : 127- 134: lkdnq LvvpAdg-L yliys TNFA_RAT : 209- 216: lekgd Lls-AevnL pkyld TNFA_RAT : 210- 216: ekgdl Ls--AevnL pkyld TNFA_SHEEP : 40- 47: lfsfl LvagAtt-L fcllh TNFA_SHEEP : 209- 215: ekgdr Ls--AeinL peyld TNFB_BOVIN : 23- 29: llllg Lll-Alp-L eaqgl TNFB_BOVIN : 24- 29: lllgl Ll--Alp-L eaqgl TNFB_BOVIN : 27- 34: gllla LpleAqg-L rgigl TNFB_BOVIN : 29- 34: llalp Le--Aqg-L rgigl TNFB_BOVIN : 60- 66: ftrgt LkpaAh--L vgdps TNFB_BOVIN : 60- 66: ftrgt Lkp-Aah-L vgdps TNFB_HUMAN : 28- 35: glllv LlpgAqg-L pgvgl TNFB_HUMAN : 29- 35: lllvl Lpg-Aqg-L pgvgl TNFB_HUMAN : 61- 67: lahst LkpaAh--L igdps TNFB_HUMAN : 61- 67: lahst Lkp-Aah-L igdps TNFB_MOUSE : 23- 29: vfllg Lll-Alp-L gaqgl TNFB_MOUSE : 24- 29: fllgl Ll--Alp-L gaqgl TNFB_MOUSE : 27- 34: gllla LplgAqg-L sgvrf TNFB_MOUSE : 29- 34: llalp Lg--Aqg-L sgvrf TNFB_MOUSE : 58- 64: lthgi LkpaAh--L vgyps TNFB_MOUSE : 58- 64: lthgi Lkp-Aah-L vgyps TNFB_PIG : 27- 34: gllla LppeAqg-L pgvgl TNFB_PIG : 60- 66: largt LkpaAh--L vgdps TNFB_PIG : 60- 66: largt Lkp-Aah-L vgdps TNFB_RABIT : 53- 59: fghst LkpaAh--L vgdps TNFB_RABIT : 53- 59: fghst Lkp-Aah-L vgdps TNFB_RAT : 23- 29: vfllg Lll-Alp-L gaqgl TNFB_RAT : 24- 29: fllgl Ll--Alp-L gaqgl TNFB_RAT : 27- 34: gllla LplgAqg-L sgvrf TNFB_RAT : 29- 34: llalp Lg--Aqg-L sgvrf TNFB_RAT : 57- 64: hlthg LlkpAah-L vgyps TNFB_RAT : 58- 64: lthgl LkpaAh--L vgyps TNFB_RAT : 58- 64: lthgl Lkp-Aah-L vgyps TNFC_HUMAN : 87- 92: dlspg Lpa-Ah--L igapl TNFC_HUMAN : 87- 92: dlspg Lp--Aah-L igapl TNFC_HUMAN : 92- 97: lpaah Lig-Ap--L kgqgl TNFC_MOUSE : 153- 158: dlnpe Lpa-Ah--L igawm TNFC_MOUSE : 153- 158: dlnpe Lp--Aah-L igawm H 8: 10.5102 92( 31) L-x(0,2)-L-x(2,4)-A Occurences: 92(31) 41BL_HUMAN : 35- 42: alvag LllLlll-A aacav 41BL_HUMAN : 35- 42: alvag Ll-LllllA aacav 41BL_HUMAN : 35- 43: alvag LllLlllaA acavf 41BL_HUMAN : 36- 42: lvagl LllLll--A aacav 41BL_HUMAN : 36- 42: lvagl Ll-Llll-A aacav 41BL_HUMAN : 36- 43: lvagl LllLlla-A acavf 41BL_HUMAN : 36- 42: lvagl L--LllllA aacav 41BL_HUMAN : 36- 43: lvagl Ll-LlllaA acavf 41BL_HUMAN : 36- 44: lvagl LllLllaaA cavfl 41BL_HUMAN : 37- 42: vagll Ll-Lll--A aacav 41BL_HUMAN : 37- 43: vagll LllLla--A acavf 41BL_HUMAN : 37- 42: vagll L--Llll-A aacav 41BL_HUMAN : 37- 43: vagll Ll-Llla-A acavf 41BL_HUMAN : 37- 44: vagll LllLlaa-A cavfl 41BL_HUMAN : 37- 43: vagll L--LlllaA acavf 41BL_HUMAN : 37- 44: vagll Ll-LllaaA cavfl 41BL_HUMAN : 38- 42: aglll L--Lll--A aacav 41BL_HUMAN : 38- 43: aglll Ll-Lla--A acavf 41BL_HUMAN : 38- 44: aglll LllLaa--A cavfl 41BL_HUMAN : 38- 43: aglll L--Llla-A acavf 41BL_HUMAN : 38- 44: aglll Ll-Llaa-A cavfl 41BL_HUMAN : 38- 44: aglll L--LllaaA cavfl 41BL_HUMAN : 38- 46: aglll LllLaaacA vflac 41BL_HUMAN : 39- 43: gllll L--Lla--A acavf 41BL_HUMAN : 39- 44: gllll Ll-Laa--A cavfl 41BL_HUMAN : 39- 44: gllll L--Llaa-A cavfl 41BL_HUMAN : 39- 46: gllll Ll-LaaacA vflac 41BL_HUMAN : 40- 44: lllll L--Laa--A cavfl 41BL_HUMAN : 40- 46: lllll L--LaaacA vflac 41BL_HUMAN : 147- 154: yvffq Le-LrrvvA gegsg 41BL_HUMAN : 167- 173: slalh LqpLrs--A agaaa 41BL_HUMAN : 167- 174: slalh LqpLrsa-A gaaal 41BL_HUMAN : 203- 208: gfqgr L--Lhls-A gqrlg 41BL_MOUSE : 34- 38: lrdtg L--Lad--A allsd 41BL_MOUSE : 34- 39: lrdtg L--Lada-A llsdt 41BL_MOUSE : 89- 96: yglva LvlLlli-A acvpi 41BL_MOUSE : 89- 96: yglva Lv-LllliA acvpi 41BL_MOUSE : 89- 97: yglva LvlLlliaA cvpif 41BL_MOUSE : 91- 96: lvalv Ll-Lli--A acvpi 41BL_MOUSE : 91- 97: lvalv LllLia--A cvpif 41BL_MOUSE : 91- 96: lvalv L--Llli-A acvpi 41BL_MOUSE : 91- 97: lvalv Ll-Llia-A cvpif 41BL_MOUSE : 91- 97: lvalv L--LlliaA cvpif 41BL_MOUSE : 92- 96: valvl L--Lli--A acvpi 41BL_MOUSE : 92- 97: valvl Ll-Lia--A cvpif 41BL_MOUSE : 92- 97: valvl L--Llia-A cvpif 41BL_MOUSE : 93- 97: alvll L--Lia--A cvpif 41BL_MOUSE : 151- 157: pvfak L--LaknqA slcnt 41BL_MOUSE : 260- 265: rswsq Ll-Llk--A ghrls 41BL_MOUSE : 260- 265: rswsq L--Lllk-A ghrls 41BL_MOUSE : 261- 265: swsql L--Llk--A ghrls CD2L_HUMAN : 50- 58: qqqlp LesLgwdvA elqln CD3L_HUMAN : 48- 55: tatla Lc-LvftvA timvl CD3L_HUMAN : 87- 93: csedl LciLkr--A pfkks CD3L_MOUSE : 52- 58: lstta LvcLvv--A vaiil CD3L_MOUSE : 52- 60: lstta LvcLvvavA iilvl CD4L_HUMAN : 205- 209: rferi L--Lra--A nthss CD4L_MOUSE : 204- 208: gseri L--Lka--A nthss FASL_MOUSE : 102- 110: lgmyq LfhLqkelA elref FASL_RAT : 101- 109: lgmyq LfhLqkelA elref OX4L_HUMAN : 24- 28: fernk L--Llv--A sviqg OX4L_MOUSE : 48- 55: fiyvc Lq-LssspA kdppi TNFA_BOVIN : 39- 44: slfsf L--Lvag-A ttlfc TNFA_CAPHI : 8- 12: rshha L--Lpa--A lrgnr TNFA_FELCA : 39- 44: slfsf L--Lvag-A ttlfc TNFA_FELCA : 102- 109: eaegq LqrLsrr-A nalla TNFA_FELCA : 151- 155: psthv L--Lth--A isrfa TNFA_HORSE : 39- 44: slfsf L--Lvag-A ttlfc TNFA_HORSE : 103- 110: qaegq LqwLsgr-A nalla TNFA_HUMAN : 67- 74: efprd Ls-LisplA qavrs TNFA_HUMAN : 102- 109: qaegq LqwLnrr-A nalla TNFA_MOUSE : 39- 44: slfsf L--Lvag-A ttlfc TNFA_MOUSE : 68- 75: kfpng Lp-LissmA qtltl TNFA_MOUSE : 105- 112: qveeq LewLsqr-A nalla TNFA_PAPSP : 39- 44: slfsf L--Lvag-A ttlfc TNFA_PAPSP : 102- 109: qaegq LqwLnrr-A nalla TNFA_PERLE : 39- 44: slfsf L--Lvag-A ttlfc TNFA_PERLE : 105- 112: qvdeq LewLsrg-A nalla TNFA_PIG : 39- 44: slfsf L--Lvag-A ttlfc TNFA_RABIT : 39- 44: slfsf L--Lvag-A ttlfc TNFA_RABIT : 68- 75: qspnn Lh-LvnpvA qmvtl TNFA_RABIT : 105- 112: qvegq LqwLsqr-A nalla TNFA_RAT : 39- 44: slfsf L--Lvag-A ttlfc TNFA_RAT : 68- 75: kfpng Lp-LissmA qtltl TNFA_RAT : 105- 112: qaeeq LewLsqr-A nalla TNFA_SHEEP : 39- 44: slfsf L--Lvag-A ttlfc TNFB_BOVIN : 18- 26: cstpp LllLglllA lplea TNFB_BOVIN : 19- 26: stppl Ll-LglllA lplea TNFB_BOVIN : 20- 26: tppll LlgLll--A lplea TNFB_BOVIN : 20- 26: tppll L--LglllA lplea TNFB_BOVIN : 21- 26: pplll Lg-Lll--A lplea TNFB_BOVIN : 24- 31: lllgl LlaLple-A qglrg TNFB_BOVIN : 25- 31: llgll La-Lple-A qglrg TNFB_HUMAN : 25- 32: lllgl LlvLlpg-A qglpg TNFB_HUMAN : 26- 32: llgll LvlLpg--A qglpg TNFB_HUMAN : 26- 32: llgll Lv-Llpg-A qglpg TNFB_HUMAN : 28- 32: glllv L--Lpg--A qglpg TNFB_HUMAN : 77- 81: skqns L--Lwr--A ntdra TNFB_MOUSE : 20- 26: tppvf LlgLll--A lplga TNFB_MOUSE : 20- 26: tppvf L--LglllA lplga TNFB_MOUSE : 21- 26: ppvfl Lg-Lll--A lplga TNFB_MOUSE : 24- 31: fllgl LlaLplg-A qglsg TNFB_MOUSE : 25- 31: llgll La-Lplg-A qglsg TNFB_MOUSE : 74- 78: skqns L--Lwr--A stdra TNFB_PIG : 18- 26: cstpi LllLglllA lppea TNFB_PIG : 19- 26: stpil Ll-LglllA lppea TNFB_PIG : 20- 26: tpill LlgLll--A lppea TNFB_PIG : 20- 26: tpill L--LglllA lppea TNFB_PIG : 21- 26: pilll Lg-Lll--A lppea TNFB_PIG : 24- 31: lllgl LlaLppe-A qglpg TNFB_PIG : 25- 31: llgll La-Lppe-A qglpg TNFB_RABIT : 11- 18: rlylp Ll-LglllA ppppg TNFB_RABIT : 12- 18: lylpl LlgLll--A ppppg TNFB_RABIT : 12- 18: lylpl L--LglllA ppppg TNFB_RABIT : 13- 18: ylpll Lg-Lll--A ppppg TNFB_RAT : 20- 26: tppvf LlgLll--A lplga TNFB_RAT : 20- 26: tppvf L--LglllA lplga TNFB_RAT : 21- 26: ppvfl Lg-Lll--A lplga TNFB_RAT : 24- 31: fllgl LlaLplg-A qglsg TNFB_RAT : 25- 31: llgll La-Lplg-A qglsg TNFB_RAT : 57- 61: hlthg L--Lkp--A ahlvg TNFB_RAT : 57- 62: hlthg L--Lkpa-A hlvgy TNFB_RAT : 74- 78: skqns L--Lwr--A ntdra TNFC_HUMAN : 19- 24: qgrgs Ll-Lav--A gatsl TNFC_HUMAN : 19- 24: qgrgs L--Llav-A gatsl TNFC_HUMAN : 19- 26: qgrgs Ll-LavagA tslvt TNFC_HUMAN : 20- 24: grgsl L--Lav--A gatsl TNFC_HUMAN : 20- 26: grgsl L--LavagA tslvt TNFC_HUMAN : 29- 35: agats LvtLll--A vpitv TNFC_HUMAN : 177- 182: pgtpe Ll-Leg--A etvtp TNFC_HUMAN : 177- 182: pgtpe L--Lleg-A etvtp TNFC_HUMAN : 178- 182: gtpel L--Leg--A etvtp TNFC_MOUSE : 19- 24: qgrgc Ll-Lav--A gatsl TNFC_MOUSE : 19- 24: qgrgc L--Llav-A gatsl TNFC_MOUSE : 19- 26: qgrgc Ll-LavagA tslvt TNFC_MOUSE : 20- 24: grgcl L--Lav--A gatsl TNFC_MOUSE : 20- 26: grgcl L--LavagA tslvt TNFC_MOUSE : 29- 35: agats LvtLll--A vpitv TNFC_MOUSE : 222- 227: srars Lt-Lrs--A lyrag TNFC_MOUSE : 242- 247: rgspe Ll-Leg--A etvtp TNFC_MOUSE : 242- 247: rgspe L--Lleg-A etvtp TNFC_MOUSE : 243- 247: gspel L--Leg--A etvtp I 9: 9.2729 99( 31) V-x(0,1)-L-x(2)-[AEGNQST] Occurences: 99(31) 41BL_HUMAN : 26- 30: aracr V-LpwA lvagl 41BL_HUMAN : 100- 105: lvaqn VlLidG plswy 41BL_HUMAN : 118- 123: pglag VsLtgG lsyke 41BL_HUMAN : 183- 188: alalt VdLppA ssear 41BL_HUMAN : 214- 219: gqrlg VhLhtE ararh 41BL_MOUSE : 221- 226: kvqgw VsLvlQ akpqv CD2L_HUMAN : 18- 22: rpygc V-LraA lvplv CD2L_HUMAN : 24- 29: lraal VpLvaG lvicl CD3L_HUMAN : 59- 63: vatim V-LvvQ rtdsi CD3L_HUMAN : 75- 80: nspdn VpLkgG ncsed CD3L_HUMAN : 156- 161: cpnns VdLklE llink CD3L_MOUSE : 53- 58: sttal VcLvvA vaiil CD3L_MOUSE : 64- 68: vaiil V-LvvQ kkdst CD3L_MOUSE : 161- 166: csnhs VdLtlQ llins CD3L_MOUSE : 232- 237: dnvls VfLysS sd CD4L_HUMAN : 30- 35: myllt VfLitQ migsa CD4L_HUMAN : 137- 141: sktts V-LqwA ekgyy CD4L_HUMAN : 153- 158: msnnl VtLenG kqltv CD4L_MOUSE : 30- 35: myllt VfLitQ migsv CD4L_MOUSE : 136- 140: snaas V-LqwA kkgyy CD4L_MOUSE : 152- 157: mksnl VmLenG kqltv FASL_MOUSE : 221- 225: ypedl V-LmeE krlny FASL_RAT : 220- 224: ypgdl V-LmeE kklny OX4L_HUMAN : 149- 154: tykdk VyLnvT tdnts OX4L_MOUSE : 46- 51: lcfiy VcLqlS sspak OX4L_MOUSE : 152- 157: afkdk VyLtvN apdtl OX4L_MOUSE : 176- 181: geliv VqLtpG ycape TNFA_BOVIN : 10- 15: smird VeLaeE vlsek TNFA_BOVIN : 117- 122: lmang VkLedN qlvvp TNFA_BOVIN : 138- 142: liysq V-LfrG qgcps TNFA_CAPHI : 78- 83: lkang VeLkdN qlvvp TNFA_CAPHI : 99- 103: liysq V-LfrG hgcps TNFA_FELCA : 10- 15: smird VeLaeE alpkk TNFA_FELCA : 117- 122: llang VeLtdN qlkvp TNFA_FELCA : 138- 142: liysq V-LftG qgcps TNFA_FELCA : 150- 155: cpsth VlLthA isrfa TNFA_FELCA : 167- 172: syqtk VnLlsA ikspc TNFA_HORSE : 10- 15: smird VeLaeE elakk TNFA_HORSE : 118- 123: llang VkLtdN qlvvp TNFA_HORSE : 139- 143: liysq V-LfkG qgcps TNFA_HORSE : 151- 156: cpsth VlLthT isrla TNFA_HORSE : 168- 173: sypsk VnLlsA ikspc TNFA_HUMAN : 10- 15: smird VeLaeE alpkk TNFA_HUMAN : 117- 122: llang VeLrdN qlvvp TNFA_HUMAN : 138- 142: liysq V-LfkG qgcps TNFA_HUMAN : 150- 155: cpsth VlLthT isria TNFA_HUMAN : 167- 172: syqtk VnLlsA ikspc TNFA_MOUSE : 10- 15: smird VeLaeE alpqk TNFA_MOUSE : 141- 145: lvysq V-LfkG qgcpd TNFA_MOUSE : 152- 157: gcpdy VlLthT vsrfa TNFA_MOUSE : 169- 174: syqek VnLlsA vkspc TNFA_PAPSP : 10- 15: smird VeLaeE alpkk TNFA_PAPSP : 117- 122: llang VeLrdN qlvvp TNFA_PAPSP : 138- 142: liysq V-LfkG qgcps TNFA_PAPSP : 150- 155: cpsth VlLthT isria TNFA_PAPSP : 167- 172: syqtk VnLlsA ikspc TNFA_PERLE : 10- 15: smird VeLaeE alpkk TNFA_PERLE : 141- 145: lvysq V-LfkG qgcss TNFA_PERLE : 152- 157: gcssy VlLthT vsrfa TNFA_PERLE : 169- 174: syedk VnLlsA ikspc TNFA_PIG : 10- 15: smird VeLaeE alakk TNFA_PIG : 116- 121: llang VkLkdN qlvvp TNFA_PIG : 137- 141: liysq V-LfrG qgcps TNFA_PIG : 149- 154: cpstn VfLthT isria TNFA_PIG : 166- 171: syqtk VnLlsA ikspc TNFA_RABIT : 10- 15: smird VeLaeG plpkk TNFA_RABIT : 78- 83: pvaqm VtLrsA srals TNFA_RABIT : 141- 145: liysq V-LfsG qgcrs TNFA_RABIT : 152- 157: gcrsy VlLthT vsrfa TNFA_RABIT : 169- 174: sypnk VnLlsA ikspc TNFA_RAT : 10- 15: smird VeLaeE alpkk TNFA_RAT : 141- 145: liysq V-LfkG qgcpd TNFA_RAT : 152- 157: gcpdy VlLthT vsrfa TNFA_RAT : 169- 174: syqek VsLlsA ikspc TNFA_SHEEP : 10- 15: smird VeLaeE vlsnk TNFA_SHEEP : 118- 123: lmang VeLkdN qlvvp TNFA_SHEEP : 139- 143: liysq V-LfrG hgcps TNFB_BOVIN : 145- 150: qypfh VpLlsA qksvc TNFB_HUMAN : 27- 31: lglll V-LlpG aqglp TNFB_HUMAN : 27- 32: lglll VlLpgA qglpg TNFB_HUMAN : 38- 43: qglpg VgLtpS aaqta TNFB_HUMAN : 135- 140: ylahe VqLfsS qypfh TNFB_HUMAN : 146- 151: qypfh VpLlsS qkmvy TNFB_HUMAN : 192- 196: giphl V-LspS tvffg TNFB_MOUSE : 132- 137: ylahe VqLfsS qypfh TNFB_MOUSE : 143- 148: qypfh VpLlsA qksvy TNFB_PIG : 37- 42: qglpg VgLppS aaqpa TNFB_PIG : 134- 139: ylahe VqLfsS qypfh TNFB_PIG : 145- 150: qypfh VpLlsA qksvc TNFB_PIG : 171- 176: vyqga VfLltQ gdqls TNFB_RABIT : 127- 132: ylahe VqLfsS qysfh TNFB_RABIT : 138- 143: qysfh VpLlsA qksvc TNFB_RABIT : 164- 169: vyqga VfLltQ gdqls TNFB_RAT : 132- 137: ylahe VqLfsS qypfh TNFB_RAT : 143- 148: qypfh VpLlsA qksvy TNFC_HUMAN : 30- 35: gatsl VtLllA vpitv TNFC_HUMAN : 157- 162: pqgrs VtLrsS lyrag TNFC_HUMAN : 188- 192: etvtp V-LdpA rrqgy TNFC_HUMAN : 211- 216: gfggl VqLrrG ervyv TNFC_MOUSE : 30- 35: gatsl VtLllA vpitv J 10: 8.3401 72( 31) G-x(4)-L Occurences: 72(31) 41BL_HUMAN : 34- 39: walva GllllL llaaa 41BL_HUMAN : 90- 95: ldlrq GmfaqL vaqnv 41BL_HUMAN : 198- 203: rnsaf GfqgrL lhlsa 41BL_HUMAN : 201- 206: afgfq GrllhL sagqr 41BL_MOUSE : 272- 277: hrlsv GlrayL hgaqd CD2L_HUMAN : 29- 34: vplva GlvicL vvciq CD3L_HUMAN : 4- 9: mdp GlqqaL ngmap CD3L_MOUSE : 124- 129: swned GtihgL iyqdg CD4L_HUMAN : 226- 231: qsihl GgvfeL qpgas CD4L_MOUSE : 77- 82: cnkge GslslL nceem CD4L_MOUSE : 199- 204: lkpsi GseriL lkaan CD4L_MOUSE : 225- 230: qsvhl GgvfeL qagas FASL_MOUSE : 244- 249: hssyl GavfnL tsadh FASL_RAT : 243- 248: hssyl GavfnL tvadh OX4L_HUMAN : 33- 38: asviq GlgllL cftyi OX4L_HUMAN : 167- 172: dfhvn GgeliL ihqnp OX4L_HUMAN : 178- 183: ihqnp GefcvL OX4L_MOUSE : 36- 41: vsgik GagmlL cfiyv TNFA_BOVIN : 26- 31: aggpq GsrscL clslf TNFA_BOVIN : 197- 202: epiyq GgvfqL ekgdr TNFA_CAPHI : 157- 162: epiyq GgvfqL ekgdr TNFA_FELCA : 26- 31: aggpq GsgrcL clslf TNFA_FELCA : 28- 33: gpqgs GrclcL slfsf TNFA_FELCA : 100- 105: npeae GqlqrL srran TNFA_FELCA : 197- 202: epiyl GgvfqL ekgdr TNFA_HORSE : 26- 31: aggpq GsrrcL clslf TNFA_HORSE : 101- 106: npqae GqlqwL sgran TNFA_HORSE : 108- 113: lqwls GranaL langv TNFA_HORSE : 198- 203: epiyl GgvfqL ekgdq TNFA_HUMAN : 26- 31: tggpq GsrrcL flslf TNFA_HUMAN : 100- 105: npqae GqlqwL nrran TNFA_HUMAN : 197- 202: epiyl GgvfqL ekgdr TNFA_MOUSE : 199- 204: epiyl GgvfqL ekgdq TNFA_PAPSP : 26- 31: tggpq GsrrcL flslf TNFA_PAPSP : 100- 105: npqae GqlqwL nrran TNFA_PAPSP : 197- 202: epiyl GgvfqL ekgdr TNFA_PERLE : 111- 116: ewlsr GanalL angmd TNFA_PERLE : 199- 204: epiyl GgvfqL ekgdr TNFA_PIG : 26- 31: aggpq GsrrcL clslf TNFA_PIG : 106- 111: lqwqs GyanaL langv TNFA_PIG : 196- 201: epiyl GgvfqL ekddr TNFA_RABIT : 26- 31: aggpq GskrcL clslf TNFA_RABIT : 103- 108: npqve GqlqwL sqran TNFA_RABIT : 199- 204: epiyl GgvfqL ekgdr TNFA_RAT : 199- 204: epmyl GgvfqL ekgdl TNFA_SHEEP : 198- 203: epiyq GgvfqL ekgdr TNFB_BOVIN : 5- 10: mtpp GrlylL rvcst TNFB_BOVIN : 22- 27: pllll GlllaL pleaq TNFB_BOVIN : 169- 174: rsvyq GavflL trgdq TNFB_BOVIN : 186- 191: sthtd GishlL lspss TNFB_HUMAN : 14- 19: lprvc GttlhL lllgl TNFB_HUMAN : 23- 28: hllll GlllvL lpgaq TNFB_HUMAN : 170- 175: hsmyh GaafqL tqgdq TNFB_MOUSE : 5- 10: mtll GrlhlL rvlgt TNFB_MOUSE : 22- 27: pvfll GlllaL plgaq TNFB_MOUSE : 167- 172: rsmyq GavflL skgdq TNFB_PIG : 22- 27: illll GlllaL ppeaq TNFB_PIG : 169- 174: rsvyq GavflL tqgdq TNFB_PIG : 186- 191: sthtd GtphlL lspss TNFB_RABIT : 162- 167: rsvyq GavflL tqgdq TNFB_RABIT : 179- 184: sthtd GiahlL lspss TNFB_RAT : 5- 10: mtpl GrlhlL rvlst TNFB_RAT : 22- 27: pvfll GlllaL plgaq TNFB_RAT : 167- 172: rsmyq GavflL skgdq TNFC_HUMAN : 8- 13: algle GrggrL qgrgs TNFC_HUMAN : 15- 20: ggrlq GrgslL lavag TNFC_HUMAN : 154- 159: ggdpq GrsvtL rssly TNFC_HUMAN : 173- 178: gaygp GtpelL legae TNFC_HUMAN : 208- 213: tsvgf GglvqL rrger TNFC_MOUSE : 15- 20: ggrpq GrgclL lavag TNFC_MOUSE : 238- 243: gaygr GspelL legae TNFC_MOUSE : 270- 275: tsvgf GglaqL rsger K 11: 8.3401 121( 31) L-x(5)-G Occurences: 121(31) 41BL_HUMAN : 84- 90: ddpag LldlrqG mfaql 41BL_HUMAN : 133- 139: edtke LvvakaG vyyvf 41BL_HUMAN : 149- 155: ffqle LrrvvaG egsgs 41BL_HUMAN : 203- 209: gfqgr LlhlsaG qrlgv 41BL_MOUSE : 190- 196: edkke LvvdspG lyyvf 41BL_MOUSE : 260- 266: rswsq LlllkaG hrlsv 41BL_MOUSE : 273- 279: rlsvg LraylhG aqday CD2L_HUMAN : 23- 29: vlraa LvplvaG lvicl CD2L_HUMAN : 48- 54: qaqqq LpleslG wdvae CD2L_HUMAN : 60- 66: wdvae LqlnhtG pqqdp CD2L_HUMAN : 96- 102: ldkgq LrihrdG iymvh CD2L_HUMAN : 158- 164: ivsqr LtplarG dtlct CD2L_HUMAN : 167- 173: argdt LctnltG tllps CD3L_HUMAN : 5- 11: mdpg LqqalnG mappg CD3L_HUMAN : 113- 119: lnktk LswnkdG ilhgv CD3L_HUMAN : 131- 137: yqdgn LviqfpG lyfii CD3L_MOUSE : 118- 124: lnntk LswnedG tihgl CD3L_MOUSE : 136- 142: yqdgn LivqfpG lyfiv CD4L_HUMAN : 32- 38: lltvf LitqmiG salfa CD4L_HUMAN : 138- 144: kttsv LqwaekG yytms CD4L_HUMAN : 152- 158: tmsnn LvtlenG kqltv CD4L_HUMAN : 161- 167: engkq LtvkrqG lyyiy CD4L_HUMAN : 193- 199: pfias LclkspG rferi CD4L_MOUSE : 32- 38: lltvf LitqmiG svlfa CD4L_MOUSE : 69- 75: vfikk LkrcnkG egsls CD4L_MOUSE : 137- 143: naasv LqwakkG yytmk CD4L_MOUSE : 151- 157: tmksn LvmlenG kqltv CD4L_MOUSE : 160- 166: engkq LtvkreG lyyvy FASL_MOUSE : 92- 98: mvlva LvgmglG myqlf FASL_MOUSE : 179- 185: ykkgg LvinetG lyfvy FASL_MOUSE : 228- 234: meekr LnycttG qiwah FASL_RAT : 91- 97: mvlva LvgmglG myqlf FASL_RAT : 178- 184: ykkgg LvineaG lyfvy FASL_RAT : 227- 233: meekk LnycttG qiwah OX4L_HUMAN : 172- 178: ggeli LihqnpG efcvl OX4L_MOUSE : 27- 33: kwkkt LrlvvsG ikgag TNFA_BOVIN : 17- 23: laeev LsekagG pqgsr TNFA_BOVIN : 51- 57: tlfcl LhfgviG pqree TNFA_BOVIN : 124- 130: lednq LvvpadG lyliy TNFA_BOVIN : 218- 224: nlpdy LdyaesG qvyfg TNFA_CAPHI : 9- 15: shhal LpaalrG nrppe TNFA_CAPHI : 85- 91: lkdnq LvvptdG lyliy TNFA_CAPHI : 178- 184: nqpey LdyaesG qvyfg TNFA_FELCA : 17- 23: laeea LpkkagG pqgsg TNFA_FELCA : 51- 57: tlfcl LhfgviG pqree TNFA_FELCA : 124- 130: ltdnq LkvpsdG lyliy TNFA_FELCA : 218- 224: nlpay LdfaesG qvyfg TNFA_HORSE : 17- 23: laeee LakkagG pqgsr TNFA_HORSE : 51- 57: tlfcl LhfgviG pqree TNFA_HORSE : 125- 131: ltdnq LvvpldG lyliy TNFA_HORSE : 219- 225: nqpny LdfaesG qvyfg TNFA_HUMAN : 17- 23: laeea LpkktgG pqgsr TNFA_HUMAN : 51- 57: tlfcl LhfgviG pqree TNFA_HUMAN : 124- 130: lrdnq LvvpseG lyliy TNFA_HUMAN : 218- 224: nrpdy LdfaesG qvyfg TNFA_MOUSE : 17- 23: laeea LpqkmgG fqnsr TNFA_MOUSE : 51- 57: tlfcl LnfgviG pqrde TNFA_MOUSE : 127- 133: lkdnq LvvpadG lylvy TNFA_MOUSE : 220- 226: nlpky LdfaesG qvyfg TNFA_PAPSP : 17- 23: laeea LpkktgG pqgsr TNFA_PAPSP : 51- 57: tlfcl LhfgviG pqree TNFA_PAPSP : 124- 130: lrdnq LvvpseG lyliy TNFA_PAPSP : 218- 224: nlpdy LdfaesG qvyfg TNFA_PERLE : 17- 23: laeea LpkkawG pqnss TNFA_PERLE : 51- 57: tlfcl LnfgviG pqree TNFA_PERLE : 105- 111: qvdeq LewlsrG anall TNFA_PERLE : 127- 133: lkdnq LvipadG lylvy TNFA_PERLE : 220- 226: nlpky LdfaesG qvyfg TNFA_PIG : 17- 23: laeea LakkagG pqgsr TNFA_PIG : 51- 57: tlfcl LhfeviG pqkee TNFA_PIG : 123- 129: lkdnq LvvptdG lyliy TNFA_PIG : 217- 223: nlpdy LdfaesG qvyfg TNFA_RABIT : 17- 23: laegp LpkkagG pqgsk TNFA_RABIT : 51- 57: tlfcl LhfrviG pqeee TNFA_RABIT : 127- 133: ltdnq LvvpadG lyliy TNFA_RABIT : 220- 226: nqpey LdlaesG qvyfg TNFA_RAT : 17- 23: laeea LpkkmgG lqnsr TNFA_RAT : 51- 57: tlfcl LnfgviG pnkee TNFA_RAT : 127- 133: lkdnq LvvpadG lyliy TNFA_RAT : 220- 226: nlpky LditesG qvyfg TNFA_SHEEP : 17- 23: laeev LsnkagG pqgsr TNFA_SHEEP : 51- 57: tlfcl LhfgviG pqree TNFA_SHEEP : 125- 131: lkdnq LvvptdG lyliy TNFA_SHEEP : 219- 225: nlpey LdyaesG qvyfg TNFB_BOVIN : 27- 33: gllla LpleaqG lrgig TNFB_BOVIN : 98- 104: lsnns LlvptsG lyfvy TNFB_BOVIN : 180- 186: trgdq LsthtdG ishll TNFB_HUMAN : 17- 23: vcgtt LhllllG lllvl TNFB_HUMAN : 25- 31: lllgl LlvllpG aqglp TNFB_HUMAN : 28- 34: glllv LlpgaqG lpgvg TNFB_HUMAN : 99- 105: lsnns LlvptsG iyfvy TNFB_HUMAN : 164- 170: lqepw LhsmyhG aafql TNFB_HUMAN : 181- 187: tqgdq LsthtdG iphlv TNFB_MOUSE : 24- 30: fllgl LlalplG aqgls TNFB_MOUSE : 27- 33: gllla LplgaqG lsgvr TNFB_MOUSE : 96- 102: lsnns LliptsG lyfvy TNFB_MOUSE : 178- 184: skgdq LsthtdG ishlh TNFB_PIG : 27- 33: gllla LppeaqG lpgvg TNFB_PIG : 98- 104: lsnns LlvptsG lyfvy TNFB_PIG : 180- 186: tqgdq LsthtdG tphll TNFB_RABIT : 17- 23: llgll LappppG aqglp TNFB_RABIT : 91- 97: lsnns LlvpssG lyfvy TNFB_RABIT : 173- 179: tqgdq LsthtdG iahll TNFB_RAT : 24- 30: fllgl LlalplG aqgls TNFB_RAT : 27- 33: gllla LplgaqG lsgvr TNFB_RAT : 96- 102: lnnns LliptsG lyfvy TNFB_RAT : 178- 184: skgdq LsthtdG ishlh TNFC_HUMAN : 4- 10: mga LglegrG grlqg TNFC_HUMAN : 19- 25: qgrgs LllavaG atslv TNFC_HUMAN : 46- 52: lavla LvpqdqG glvte TNFC_HUMAN : 97- 103: ligap LkgqglG wettk TNFC_HUMAN : 125- 131: sdaeg LalpqdG lyyly TNFC_HUMAN : 200- 206: qgygp LwytsvG fgglv TNFC_HUMAN : 210- 216: vgfgg LvqlrrG ervyv TNFC_MOUSE : 9- 15: rglqg LggrpqG rgcll TNFC_MOUSE : 19- 25: qgrgc LllavaG atslv TNFC_MOUSE : 46- 52: lavla LvpqdqG rrvek TNFC_MOUSE : 103- 109: nasrn LastsqG pvaqs TNFC_MOUSE : 191- 197: spthg LalpqdG vyyly TNFC_MOUSE : 262- 268: igygs LwytsvG fggla TNFC_MOUSE : 272- 278: vgfgg LaqlrsG ervyv L 12: 8.3401 151( 31) L-x-L Occurences: 151(31) 41BL_HUMAN : 35- 37: alvag LlL lllla 41BL_HUMAN : 36- 38: lvagl LlL lllaa 41BL_HUMAN : 37- 39: vagll LlL llaaa 41BL_HUMAN : 38- 40: aglll LlL laaac 41BL_HUMAN : 39- 41: gllll LlL aaaca 41BL_HUMAN : 85- 87: dpagl LdL rqgmf 41BL_HUMAN : 147- 149: yvffq LeL rrvva 41BL_HUMAN : 163- 165: sgsvs LaL hlqpl 41BL_HUMAN : 165- 167: svsla LhL qplrs 41BL_HUMAN : 179- 181: agaaa LaL tvdlp 41BL_HUMAN : 204- 206: fqgrl LhL sagqr 41BL_HUMAN : 235- 237: qgatv LgL frvtp 41BL_MOUSE : 89- 91: yglva LvL lllia 41BL_MOUSE : 91- 93: lvalv LlL liaac 41BL_MOUSE : 92- 94: valvl LlL iaacv 41BL_MOUSE : 202- 204: lyyvf LeL klspt 41BL_MOUSE : 204- 206: yvfle LkL sptft 41BL_MOUSE : 223- 225: qgwvs LvL qakpq 41BL_MOUSE : 237- 239: ddfdn LaL tvelf 41BL_MOUSE : 260- 262: rswsq LlL lkagh 41BL_MOUSE : 261- 263: swsql LlL kaghr 41BL_MOUSE : 299- 301: ttsfg LfL vkpdn CD2L_HUMAN : 48- 50: qaqqq LpL eslgw CD2L_HUMAN : 60- 62: wdvae LqL nhtgp CD2L_HUMAN : 143- 145: rsisl LrL sfhqg CD3L_HUMAN : 46- 48: lttat LaL clvft CD3L_HUMAN : 48- 50: tatla LcL vftva CD3L_HUMAN : 158- 160: nnsvd LkL ellin CD3L_HUMAN : 160- 162: svdlk LeL linkh CD3L_MOUSE : 63- 65: avaii LvL vvqkk CD3L_MOUSE : 163- 165: nhsvd LtL qllin CD3L_MOUSE : 165- 167: svdlt LqL linsk CD4L_HUMAN : 79- 81: tgers LsL lncee CD4L_HUMAN : 193- 195: pfias LcL kspgr CD4L_HUMAN : 259- 261: tsfgl LkL CD4L_MOUSE : 79- 81: kgegs LsL lncee CD4L_MOUSE : 192- 194: pfivg LwL kpsig CD4L_MOUSE : 258- 260: ssfgl LkL FASL_MOUSE : 62- 64: ppsqp LpL ppltp FASL_MOUSE : 79- 81: dhntn LwL pvvff FASL_MOUSE : 220- 222: kyped LvL meekr FASL_MOUSE : 262- 264: vnisq LsL infee FASL_RAT : 78- 80: kdnie LwL pviff FASL_RAT : 219- 221: kypgd LvL meekk FASL_RAT : 261- 263: vnisq LsL infee OX4L_HUMAN : 24- 26: fernk LlL vasvi OX4L_HUMAN : 34- 36: sviqg LgL llcft OX4L_HUMAN : 36- 38: iqglg LlL cftyi OX4L_HUMAN : 170- 172: vngge LiL ihqnp OX4L_MOUSE : 27- 29: kwkkt LrL vvsgi OX4L_MOUSE : 48- 50: fiyvc LqL ssspa TNFA_BOVIN : 31- 33: gsrsc LcL slfsf TNFA_BOVIN : 33- 35: rsclc LsL fsfll TNFA_BOVIN : 131- 133: vpadg LyL iysqv TNFA_BOVIN : 150- 152: cpstp LfL thtis TNFA_CAPHI : 92- 94: vptdg LyL iysqv TNFA_CAPHI : 111- 113: cpstp LfL thtis TNFA_FELCA : 31- 33: gsgrc LcL slfsf TNFA_FELCA : 33- 35: grclc LsL fsfll TNFA_FELCA : 67- 69: elphg LqL inplp TNFA_FELCA : 131- 133: vpsdg LyL iysqv TNFA_HORSE : 31- 33: gsrrc LcL slfsf TNFA_HORSE : 33- 35: rrclc LsL fsfll TNFA_HORSE : 132- 134: vpldg LyL iysqv TNFA_HUMAN : 31- 33: gsrrc LfL slfsf TNFA_HUMAN : 33- 35: rrclf LsL fsfli TNFA_HUMAN : 67- 69: efprd LsL ispla TNFA_HUMAN : 131- 133: vpseg LyL iysqv TNFA_MOUSE : 31- 33: nsrrc LcL slfsf TNFA_MOUSE : 33- 35: rrclc LsL fsfll TNFA_MOUSE : 68- 70: kfpng LpL issma TNFA_MOUSE : 78- 80: smaqt LtL rsssq TNFA_MOUSE : 134- 136: vpadg LyL vysqv TNFA_PAPSP : 31- 33: gsrrc LfL slfsf TNFA_PAPSP : 33- 35: rrclf LsL fsfll TNFA_PAPSP : 131- 133: vpseg LyL iysqv TNFA_PERLE : 31- 33: nssrc LcL slfsf TNFA_PERLE : 33- 35: srclc LsL fsfll TNFA_PERLE : 78- 80: smaqt LtL rsssq TNFA_PERLE : 134- 136: ipadg LyL vysqv TNFA_PIG : 31- 33: gsrrc LcL slfsf TNFA_PIG : 33- 35: rrclc LsL fsfll TNFA_PIG : 130- 132: vptdg LyL iysqv TNFA_RABIT : 31- 33: gskrc LcL slfsf TNFA_RABIT : 33- 35: krclc LsL fsfll TNFA_RABIT : 68- 70: qspnn LhL vnpva TNFA_RABIT : 134- 136: vpadg LyL iysqv TNFA_RABIT : 220- 222: nqpey LdL aesgq TNFA_RAT : 31- 33: nsrrc LcL slfsf TNFA_RAT : 33- 35: rrclc LsL fsfll TNFA_RAT : 68- 70: kfpng LpL issma TNFA_RAT : 78- 80: smaqt LtL rsssq TNFA_RAT : 134- 136: vpadg LyL iysqv TNFA_SHEEP : 33- 35: rscwc LsL fsfll TNFA_SHEEP : 132- 134: vptdg LyL iysqv TNFA_SHEEP : 151- 153: cpstp LfL thtis TNFB_BOVIN : 7- 9: tppgr LyL lrvcs TNFB_BOVIN : 18- 20: cstpp LlL lglll TNFB_BOVIN : 19- 21: stppl LlL gllla TNFB_BOVIN : 21- 23: pplll LgL llalp TNFB_BOVIN : 23- 25: llllg LlL alple TNFB_BOVIN : 25- 27: llgll LaL pleaq TNFB_BOVIN : 27- 29: gllla LpL eaqgl TNFB_BOVIN : 128- 130: atptp LyL ahevq TNFB_BOVIN : 190- 192: dgish LlL spssv TNFB_HUMAN : 7- 9: tpper LfL prvcg TNFB_HUMAN : 17- 19: vcgtt LhL lllgl TNFB_HUMAN : 19- 21: gttlh LlL lglll TNFB_HUMAN : 20- 22: ttlhl LlL glllv TNFB_HUMAN : 22- 24: lhlll LgL llvll TNFB_HUMAN : 24- 26: llllg LlL vllpg TNFB_HUMAN : 26- 28: llgll LvL lpgaq TNFB_HUMAN : 129- 131: atssp LyL ahevq TNFB_HUMAN : 191- 193: dgiph LvL spstv TNFB_MOUSE : 7- 9: tllgr LhL lrvlg TNFB_MOUSE : 21- 23: ppvfl LgL llalp TNFB_MOUSE : 23- 25: vfllg LlL alplg TNFB_MOUSE : 25- 27: llgll LaL plgaq TNFB_MOUSE : 27- 29: gllla LpL gaqgl TNFB_PIG : 7- 9: tppgr LyL rrvcs TNFB_PIG : 18- 20: cstpi LlL lglll TNFB_PIG : 19- 21: stpil LlL gllla TNFB_PIG : 21- 23: pilll LgL llalp TNFB_PIG : 23- 25: llllg LlL alppe TNFB_PIG : 25- 27: llgll LaL ppeaq TNFB_PIG : 128- 130: atptp LyL ahevq TNFB_PIG : 190- 192: dgtph LlL spssv TNFB_RABIT : 7- 9: tppgr LyL plllg TNFB_RABIT : 9- 11: pgrly LpL llgll TNFB_RABIT : 11- 13: rlylp LlL gllla TNFB_RABIT : 13- 15: ylpll LgL llapp TNFB_RABIT : 15- 17: plllg LlL apppp TNFB_RABIT : 121- 123: avptp LyL ahevq TNFB_RABIT : 183- 185: dgiah LlL spssv TNFB_RAT : 7- 9: tplgr LhL lrvls TNFB_RAT : 21- 23: ppvfl LgL llalp TNFB_RAT : 23- 25: vfllg LlL alplg TNFB_RAT : 25- 27: llgll LaL plgaq TNFB_RAT : 27- 29: gllla LpL gaqgl TNFC_HUMAN : 4- 6: mga LgL egrgg TNFC_HUMAN : 19- 21: qgrgs LlL avaga TNFC_HUMAN : 32- 34: tslvt LlL avpit TNFC_HUMAN : 44- 46: tvlav LaL vpqdq TNFC_HUMAN : 125- 127: sdaeg LaL pqdgl TNFC_HUMAN : 177- 179: pgtpe LlL egaet TNFC_MOUSE : 19- 21: qgrgc LlL avaga TNFC_MOUSE : 32- 34: tslvt LlL avpit TNFC_MOUSE : 44- 46: tvlav LaL vpqdq TNFC_MOUSE : 191- 193: spthg LaL pqdgv TNFC_MOUSE : 222- 224: srars LtL rsaly TNFC_MOUSE : 242- 244: rgspe LlL egaet M 13: 8.3401 73( 31) L-x-V Occurences: 73(31) 41BL_HUMAN : 133- 135: edtke LvV akagv 41BL_HUMAN : 181- 183: aaala LtV dlppa 41BL_HUMAN : 212- 214: sagqr LgV hlhte 41BL_MOUSE : 6- 8: mdqht LdV edtad 41BL_MOUSE : 190- 192: edkke LvV dspgl 41BL_MOUSE : 239- 241: fdnla LtV elfpc 41BL_MOUSE : 269- 271: kaghr LsV glray CD2L_HUMAN : 34- 36: glvic LvV ciqrf CD2L_HUMAN : 128- 130: hhptt LaV gicsp CD3L_HUMAN : 60- 62: atimv LvV qrtds CD3L_HUMAN : 102- 104: ksway LqV akhln CD3L_HUMAN : 198- 200: flldy LqV nttis CD3L_MOUSE : 55- 57: talvc LvV avaii CD3L_MOUSE : 65- 67: aiilv LvV qkkds CD3L_MOUSE : 107- 109: ksway LqV skhln CD3L_MOUSE : 136- 138: yqdgn LiV qfpgl CD3L_MOUSE : 203- 205: fllhy LqV nstis CD3L_MOUSE : 230- 232: pldnv LsV flyss CD4L_HUMAN : 28- 30: ifmyl LtV flitq CD4L_HUMAN : 161- 163: engkq LtV krqgl CD4L_MOUSE : 28- 30: ifmyl LtV flitq CD4L_MOUSE : 160- 162: engkq LtV kregl FASL_MOUSE : 81- 83: ntnlw LpV vffmv FASL_MOUSE : 120- 122: ftnqs LkV ssfek FASL_MOUSE : 255- 257: tsadh LyV nisql FASL_RAT : 80- 82: nielw LpV iffmv FASL_RAT : 119- 121: ftnhs LrV ssfek FASL_RAT : 248- 250: gavfn LtV adhly FASL_RAT : 254- 256: tvadh LyV nisql OX4L_HUMAN : 25- 27: ernkl LlV asviq OX4L_HUMAN : 50- 52: lhfsa LqV shryp OX4L_HUMAN : 138- 140: rsvns LmV aslty OX4L_HUMAN : 151- 153: kdkvy LnV ttdnt OX4L_MOUSE : 29- 31: kktlr LvV sgikg OX4L_MOUSE : 154- 156: kdkvy LtV napdt OX4L_MOUSE : 173- 175: indge LiV vqltp TNFA_BOVIN : 39- 41: slfsf LlV agatt TNFA_BOVIN : 124- 126: lednq LvV padgl TNFA_CAPHI : 85- 87: lkdnq LvV ptdgl TNFA_FELCA : 39- 41: slfsf LlV agatt TNFA_FELCA : 124- 126: ltdnq LkV psdgl TNFA_HORSE : 39- 41: slfsf LlV agatt TNFA_HORSE : 125- 127: ltdnq LvV pldgl TNFA_HORSE : 160- 162: htisr LaV sypsk TNFA_HUMAN : 39- 41: slfsf LiV agatt TNFA_HUMAN : 124- 126: lrdnq LvV psegl TNFA_MOUSE : 39- 41: slfsf LlV agatt TNFA_MOUSE : 127- 129: lkdnq LvV padgl TNFA_PAPSP : 39- 41: slfsf LlV agatt TNFA_PAPSP : 124- 126: lrdnq LvV psegl TNFA_PERLE : 39- 41: slfsf LlV agatt TNFA_PIG : 39- 41: slfsf LlV agatt TNFA_PIG : 123- 125: lkdnq LvV ptdgl TNFA_RABIT : 39- 41: slfsf LlV agatt TNFA_RABIT : 127- 129: ltdnq LvV padgl TNFA_RAT : 39- 41: slfsf LlV agatt TNFA_RAT : 127- 129: lkdnq LvV padgl TNFA_SHEEP : 39- 41: slfsf LlV agatt TNFA_SHEEP : 125- 127: lkdnq LvV ptdgl TNFB_BOVIN : 10- 12: grlyl LrV cstpp TNFB_BOVIN : 98- 100: lsnns LlV ptsgl TNFB_HUMAN : 25- 27: lllgl LlV llpga TNFB_HUMAN : 99- 101: lsnns LlV ptsgi TNFB_MOUSE : 10- 12: grlhl LrV lgtpp TNFB_PIG : 98- 100: lsnns LlV ptsgl TNFB_RABIT : 91- 93: lsnns LlV pssgl TNFB_RAT : 10- 12: grlhl LrV lstpp TNFC_HUMAN : 21- 23: rgsll LaV agats TNFC_HUMAN : 34- 36: lvtll LaV pitvl TNFC_HUMAN : 41- 43: vpitv LaV lalvp TNFC_MOUSE : 21- 23: rgcll LaV agats TNFC_MOUSE : 34- 36: lvtll LaV pitvl TNFC_MOUSE : 41- 43: vpitv LaV lalvp N 14: 8.3401 103( 31) V-x-L Occurences: 103(31) 41BL_HUMAN : 47- 49: aaaca VfL acpwa 41BL_HUMAN : 100- 102: lvaqn VlL idgpl 41BL_HUMAN : 118- 120: pglag VsL tggls 41BL_HUMAN : 161- 163: egsgs VsL alhlq 41BL_HUMAN : 183- 185: alalt VdL ppass 41BL_HUMAN : 214- 216: gqrlg VhL htear 41BL_MOUSE : 87- 89: klygl VaL vllll 41BL_MOUSE : 90- 92: glval VlL lliaa 41BL_MOUSE : 200- 202: pglyy VfL elkls 41BL_MOUSE : 221- 223: kvqgw VsL vlqak 41BL_MOUSE : 241- 243: nlalt VeL fpcsm 41BL_MOUSE : 271- 273: ghrls VgL raylh CD2L_HUMAN : 24- 26: lraal VpL vaglv CD2L_HUMAN : 110- 112: mvhiq VtL aicss CD3L_HUMAN : 75- 77: nspdn VpL kggnc CD3L_HUMAN : 156- 158: cpnns VdL klell CD3L_MOUSE : 53- 55: sttal VcL vvava CD3L_MOUSE : 161- 163: csnhs VdL tlqll CD3L_MOUSE : 232- 234: dnvls VfL ysssd CD4L_HUMAN : 30- 32: myllt VfL itqmi CD4L_HUMAN : 44- 46: salfa VyL hrrld CD4L_HUMAN : 153- 155: msnnl VtL engkq CD4L_MOUSE : 30- 32: myllt VfL itqmi CD4L_MOUSE : 44- 46: svlfa VyL hrrld CD4L_MOUSE : 57- 59: kveee VnL hedfv CD4L_MOUSE : 152- 154: mksnl VmL engkq CD4L_MOUSE : 190- 192: qrpfi VgL wlkps CD4L_MOUSE : 222- 224: ceqqs VhL ggvfe FASL_MOUSE : 90- 92: ffmvl VaL vgmgl FASL_RAT : 89- 91: ffmvl VaL vgmgl OX4L_HUMAN : 149- 151: tykdk VyL nvttd OX4L_MOUSE : 46- 48: lcfiy VcL qlsss OX4L_MOUSE : 152- 154: afkdk VyL tvnap OX4L_MOUSE : 176- 178: geliv VqL tpgyc OX4L_MOUSE : 196- 198: stvnq VpL TNFA_BOVIN : 10- 12: smird VeL aeevl TNFA_BOVIN : 117- 119: lmang VkL ednql TNFA_CAPHI : 78- 80: lkang VeL kdnql TNFA_FELCA : 10- 12: smird VeL aeeal TNFA_FELCA : 117- 119: llang VeL tdnql TNFA_FELCA : 150- 152: cpsth VlL thais TNFA_FELCA : 167- 169: syqtk VnL lsaik TNFA_HORSE : 10- 12: smird VeL aeeel TNFA_HORSE : 118- 120: llang VkL tdnql TNFA_HORSE : 127- 129: dnqlv VpL dglyl TNFA_HORSE : 151- 153: cpsth VlL thtis TNFA_HORSE : 168- 170: sypsk VnL lsaik TNFA_HUMAN : 10- 12: smird VeL aeeal TNFA_HUMAN : 117- 119: llang VeL rdnql TNFA_HUMAN : 150- 152: cpsth VlL thtis TNFA_HUMAN : 167- 169: syqtk VnL lsaik TNFA_MOUSE : 10- 12: smird VeL aeeal TNFA_MOUSE : 152- 154: gcpdy VlL thtvs TNFA_MOUSE : 169- 171: syqek VnL lsavk TNFA_MOUSE : 214- 216: qlsae VnL pkyld TNFA_PAPSP : 10- 12: smird VeL aeeal TNFA_PAPSP : 117- 119: llang VeL rdnql TNFA_PAPSP : 150- 152: cpsth VlL thtis TNFA_PAPSP : 167- 169: syqtk VnL lsaik TNFA_PERLE : 10- 12: smird VeL aeeal TNFA_PERLE : 152- 154: gcssy VlL thtvs TNFA_PERLE : 169- 171: syedk VnL lsaik TNFA_PERLE : 214- 216: rlsae VnL pkyld TNFA_PIG : 10- 12: smird VeL aeeal TNFA_PIG : 116- 118: llang VkL kdnql TNFA_PIG : 149- 151: cpstn VfL thtis TNFA_PIG : 166- 168: syqtk VnL lsaik TNFA_RABIT : 10- 12: smird VeL aegpl TNFA_RABIT : 78- 80: pvaqm VtL rsasr TNFA_RABIT : 152- 154: gcrsy VlL thtvs TNFA_RABIT : 169- 171: sypnk VnL lsaik TNFA_RAT : 10- 12: smird VeL aeeal TNFA_RAT : 152- 154: gcpdy VlL thtvs TNFA_RAT : 169- 171: syqek VsL lsaik TNFA_RAT : 214- 216: llsae VnL pkyld TNFA_SHEEP : 10- 12: smird VeL aeevl TNFA_SHEEP : 118- 120: lmang VeL kdnql TNFB_BOVIN : 134- 136: ylahe VqL fspqy TNFB_BOVIN : 145- 147: qypfh VpL lsaqk TNFB_BOVIN : 171- 173: vyqga VfL ltrgd TNFB_HUMAN : 27- 29: lglll VlL pgaqg TNFB_HUMAN : 38- 40: qglpg VgL tpsaa TNFB_HUMAN : 135- 137: ylahe VqL fssqy TNFB_HUMAN : 146- 148: qypfh VpL lssqk TNFB_MOUSE : 18- 20: lgtpp VfL lglll TNFB_MOUSE : 132- 134: ylahe VqL fssqy TNFB_MOUSE : 143- 145: qypfh VpL lsaqk TNFB_MOUSE : 169- 171: myqga VfL lskgd TNFB_PIG : 37- 39: qglpg VgL ppsaa TNFB_PIG : 134- 136: ylahe VqL fssqy TNFB_PIG : 145- 147: qypfh VpL lsaqk TNFB_PIG : 171- 173: vyqga VfL ltqgd TNFB_RABIT : 127- 129: ylahe VqL fssqy TNFB_RABIT : 138- 140: qysfh VpL lsaqk TNFB_RABIT : 164- 166: vyqga VfL ltqgd TNFB_RAT : 18- 20: lstpp VfL lglll TNFB_RAT : 132- 134: ylahe VqL fssqy TNFB_RAT : 143- 145: qypfh VpL lsaqk TNFB_RAT : 169- 171: myqga VfL lskgd TNFC_HUMAN : 30- 32: gatsl VtL llavp TNFC_HUMAN : 157- 159: pqgrs VtL rssly TNFC_HUMAN : 211- 213: gfggl VqL rrger TNFC_MOUSE : 30- 32: gatsl VtL llavp O 15: 8.3401 50( 31) L-T Occurences: 50(31) 41BL_HUMAN : 120- 121: lagvs LT gglsy 41BL_HUMAN : 181- 182: aaala LT vdlpp 41BL_HUMAN : 228- 229: rhawq LT qgatv 41BL_MOUSE : 111- 112: eprpa LT ittsp 41BL_MOUSE : 239- 240: fdnla LT velfp CD2L_HUMAN : 158- 159: ivsqr LT plarg CD2L_HUMAN : 171- 172: tlctn LT gtllp CD3L_HUMAN : 41- 42: rsyfy LT tatla CD3L_MOUSE : 163- 164: nhsvd LT lqlli CD4L_HUMAN : 28- 29: ifmyl LT vflit CD4L_HUMAN : 161- 162: engkq LT vkrqg CD4L_MOUSE : 28- 29: ifmyl LT vflit CD4L_MOUSE : 160- 161: engkq LT vkreg FASL_MOUSE : 67- 68: lplpp LT plkkk FASL_MOUSE : 147- 148: rsvah LT gnphs FASL_MOUSE : 249- 250: gavfn LT sadhl FASL_RAT : 146- 147: rsvah LT gnprs FASL_RAT : 248- 249: gavfn LT vadhl OX4L_HUMAN : 77- 78: ekgfi LT sqked OX4L_HUMAN : 143- 144: lmvas LT ykdkv OX4L_MOUSE : 154- 155: kdkvy LT vnapd OX4L_MOUSE : 178- 179: livvq LT pgyca TNFA_BOVIN : 152- 153: stplf LT htisr TNFA_CAPHI : 113- 114: stplf LT htisr TNFA_FELCA : 119- 120: angve LT dnqlk TNFA_FELCA : 152- 153: sthvl LT haisr TNFA_HORSE : 120- 121: angvk LT dnqlv TNFA_HORSE : 153- 154: sthvl LT htisr TNFA_HUMAN : 152- 153: sthvl LT htisr TNFA_MOUSE : 78- 79: smaqt LT lrsss TNFA_MOUSE : 154- 155: pdyvl LT htvsr TNFA_PAPSP : 152- 153: sthvl LT htisr TNFA_PERLE : 78- 79: smaqt LT lrsss TNFA_PERLE : 154- 155: ssyvl LT htvsr TNFA_PIG : 151- 152: stnvf LT htisr TNFA_RABIT : 122- 123: angmk LT dnqlv TNFA_RABIT : 154- 155: rsyvl LT htvsr TNFA_RAT : 78- 79: smaqt LT lrsss TNFA_RAT : 154- 155: pdyvl LT htvsr TNFA_SHEEP : 153- 154: stplf LT htisr TNFB_BOVIN : 39- 40: lrgig LT psaaq TNFB_BOVIN : 174- 175: gavfl LT rgdql TNFB_HUMAN : 40- 41: lpgvg LT psaaq TNFB_HUMAN : 175- 176: gaafq LT qgdql TNFB_MOUSE : 53- 54: lpqkh LT hgilk TNFB_PIG : 174- 175: gavfl LT qgdql TNFB_RABIT : 167- 168: gavfl LT qgdql TNFB_RAT : 53- 54: ppqkh LT hgllk TNFC_HUMAN : 113- 114: keqaf LT sgtqf TNFC_MOUSE : 222- 223: srars LT lrsal P 16: 8.3401 127( 31) L-x(4)-S Occurences: 127(31) 41BL_HUMAN : 120- 125: lagvs LtgglS ykedt 41BL_HUMAN : 167- 172: slalh LqplrS aagaa 41BL_HUMAN : 185- 190: altvd LppasS earns 41BL_HUMAN : 248- 253: eipag LpsprS e 41BL_MOUSE : 111- 116: eprpa LtittS pnlgt 41BL_MOUSE : 202- 207: lyyvf LelklS ptftn CD2L_HUMAN : 112- 117: hiqvt LaicsS ttasr CD3L_HUMAN : 221- 226: tstfp LenvlS iflys CD3L_MOUSE : 5- 10: mepg LqqagS cgaps CD3L_MOUSE : 95- 100: dlfct LkstpS kkswa CD3L_MOUSE : 226- 231: tntfp LdnvlS vflys CD4L_HUMAN : 231- 236: ggvfe LqpgaS vfvnv CD4L_MOUSE : 192- 197: pfivg LwlkpS igser CD4L_MOUSE : 216- 221: hsssq LceqqS vhlgg CD4L_MOUSE : 230- 235: ggvfe LqagaS vfvnv FASL_MOUSE : 186- 191: inetg LyfvyS kvyfr FASL_MOUSE : 255- 260: tsadh LyvniS qlsli FASL_RAT : 185- 190: ineag LyfvyS kvyfr FASL_RAT : 254- 259: tvadh LyvniS qlsli OX4L_HUMAN : 24- 29: fernk LllvaS viqgl OX4L_HUMAN : 105- 110: fylis LkgyfS qevni OX4L_HUMAN : 129- 134: eplfq LkkvrS vnslm OX4L_MOUSE : 27- 32: kwkkt LrlvvS gikga OX4L_MOUSE : 48- 53: fiyvc LqlssS pakdp TNFA_BOVIN : 102- 107: nspgq LrwwdS yanal TNFA_BOVIN : 131- 136: vpadg LyliyS qvlfr TNFA_BOVIN : 152- 157: stplf LthtiS riavs TNFA_BOVIN : 170- 175: tkvni LsaikS pchre TNFA_BOVIN : 218- 223: nlpdy LdyaeS gqvyf TNFA_CAPHI : 63- 68: sapgq LrwgdS yanal TNFA_CAPHI : 92- 97: vptdg LyliyS qvlfr TNFA_CAPHI : 113- 118: stplf LthtiS riavs TNFA_CAPHI : 131- 136: tkvni LsaikS pchre TNFA_CAPHI : 178- 183: nqpey LdyaeS gqvyf TNFA_FELCA : 131- 136: vpsdg LyliyS qvlft TNFA_FELCA : 152- 157: sthvl LthaiS rfavs TNFA_FELCA : 170- 175: tkvnl LsaikS pcqre TNFA_FELCA : 218- 223: nlpay LdfaeS gqvyf TNFA_HORSE : 132- 137: vpldg LyliyS qvlfk TNFA_HORSE : 153- 158: sthvl LthtiS rlavs TNFA_HORSE : 171- 176: skvnl LsaikS pchte TNFA_HORSE : 219- 224: nqpny LdfaeS gqvyf TNFA_HUMAN : 131- 136: vpseg LyliyS qvlfk TNFA_HUMAN : 152- 157: sthvl LthtiS riavs TNFA_HUMAN : 170- 175: tkvnl LsaikS pcqre TNFA_HUMAN : 218- 223: nrpdy LdfaeS gqvyf TNFA_MOUSE : 68- 73: kfpng LplisS maqtl TNFA_MOUSE : 78- 83: smaqt LtlrsS sqnss TNFA_MOUSE : 134- 139: vpadg LylvyS qvlfk TNFA_MOUSE : 154- 159: pdyvl LthtvS rfais TNFA_MOUSE : 172- 177: ekvnl LsavkS pcpkd TNFA_MOUSE : 220- 225: nlpky LdfaeS gqvyf TNFA_PAPSP : 131- 136: vpseg LyliyS qvlfk TNFA_PAPSP : 152- 157: sthvl LthtiS riavs TNFA_PAPSP : 170- 175: tkvnl LsaikS pcqre TNFA_PAPSP : 218- 223: nlpdy LdfaeS gqvyf TNFA_PERLE : 68- 73: kfpnn LpiigS maqtl TNFA_PERLE : 78- 83: smaqt LtlrsS sqnss TNFA_PERLE : 134- 139: ipadg LylvyS qvlfk TNFA_PERLE : 154- 159: ssyvl LthtvS rfavs TNFA_PERLE : 172- 177: dkvnl LsaikS pcpke TNFA_PERLE : 220- 225: nlpky LdfaeS gqvyf TNFA_PIG : 130- 135: vptdg LyliyS qvlfr TNFA_PIG : 151- 156: stnvf LthtiS riavs TNFA_PIG : 169- 174: tkvnl LsaikS pcqre TNFA_PIG : 217- 222: nlpdy LdfaeS gqvyf TNFA_RABIT : 134- 139: vpadg LyliyS qvlfs TNFA_RABIT : 154- 159: rsyvl LthtvS rfavs TNFA_RABIT : 172- 177: nkvnl LsaikS pchre TNFA_RABIT : 220- 225: nqpey LdlaeS gqvyf TNFA_RAT : 68- 73: kfpng LplisS maqtl TNFA_RAT : 78- 83: smaqt LtlrsS sqnss TNFA_RAT : 134- 139: vpadg LyliyS qvlfk TNFA_RAT : 154- 159: pdyvl LthtvS rfais TNFA_RAT : 172- 177: ekvsl LsaikS pcpkd TNFA_RAT : 220- 225: nlpky LditeS gqvyf TNFA_SHEEP : 103- 108: sapgq LrwgdS yanal TNFA_SHEEP : 132- 137: vptdg LyliyS qvlfr TNFA_SHEEP : 153- 158: stplf LthtiS riavs TNFA_SHEEP : 171- 176: tkvni LsaikS pchre TNFA_SHEEP : 219- 224: nlpey LdyaeS gqvyf TNFB_BOVIN : 9- 14: pgrly LlrvcS tppll TNFB_BOVIN : 66- 71: kpaah LvgdpS tqdsl TNFB_BOVIN : 87- 92: tdraf LrhgfS lsnns TNFB_BOVIN : 98- 103: lsnns LlvptS glyfv TNFB_BOVIN : 105- 110: vptsg LyfvyS qvvfs TNFB_BOVIN : 148- 153: fhvpl LsaqkS vcpgp TNFB_BOVIN : 190- 195: dgish LllspS svffg TNFB_BOVIN : 191- 196: gishl LlspsS vffga TNFB_HUMAN : 67- 72: kpaah LigdpS kqnsl TNFB_HUMAN : 88- 93: tdraf LqdgfS lsnns TNFB_HUMAN : 99- 104: lsnns LlvptS giyfv TNFB_HUMAN : 191- 196: dgiph LvlspS tvffg TNFB_MOUSE : 64- 69: kpaah LvgypS kqnsl TNFB_MOUSE : 74- 79: skqns LlwraS tdraf TNFB_MOUSE : 85- 90: tdraf LrhgfS lsnns TNFB_MOUSE : 96- 101: lsnns LliptS glyfv TNFB_MOUSE : 103- 108: iptsg LyfvyS qvvfs TNFB_MOUSE : 146- 151: fhvpl LsaqkS vypgl TNFB_MOUSE : 188- 193: dgish LhfspS svffg TNFB_PIG : 9- 14: pgrly LrrvcS tpill TNFB_PIG : 66- 71: kpaah LvgdpS tpdsl TNFB_PIG : 92- 97: lrhgf LlsnnS llvpt TNFB_PIG : 98- 103: lsnns LlvptS glyfv TNFB_PIG : 105- 110: vptsg LyfvyS qvvfs TNFB_PIG : 148- 153: fhvpl LsaqkS vcpgp TNFB_PIG : 190- 195: dgtph LllspS svffg TNFB_PIG : 191- 196: gtphl LlspsS vffga TNFB_RABIT : 59- 64: kpaah LvgdpS aqdsl TNFB_RABIT : 80- 85: tdraf LrhgfS lsnns TNFB_RABIT : 91- 96: lsnns LlvpsS glyfv TNFB_RABIT : 98- 103: vpssg LyfvyS qvvfs TNFB_RABIT : 141- 146: fhvpl LsaqkS vcpgp TNFB_RABIT : 183- 188: dgiah LllspS svffg TNFB_RABIT : 184- 189: giahl LlspsS vffga TNFB_RAT : 9- 14: lgrlh LlrvlS tppvf TNFB_RAT : 64- 69: kpaah LvgypS kqnsl TNFB_RAT : 85- 90: tdraf LrhgfS lnnns TNFB_RAT : 96- 101: lnnns LliptS glyfv TNFB_RAT : 103- 108: iptsg LyfvyS qvvfs TNFB_RAT : 146- 151: fhvpl LsaqkS vypgl TNFB_RAT : 188- 193: dgish LhfspS tvffg TNFC_HUMAN : 13- 18: grggr LqgrgS lllav TNFC_MOUSE : 78- 83: kpsci LpspsS lsetp TNFC_MOUSE : 92- 97: tpdpr LhpqrS nasrn TNFC_MOUSE : 168- 173: msgqg LsweaS qeeaf TNFC_MOUSE : 272- 277: vgfgg LaqlrS gervy Q 17: 8.3401 78( 31) Q-L Occurences: 78(31) 41BL_HUMAN : 94- 95: qgmfa QL vaqnv 41BL_HUMAN : 146- 147: yyvff QL elrrv 41BL_HUMAN : 227- 228: arhaw QL tqgat 41BL_MOUSE : 259- 260: drsws QL lllka CD2L_HUMAN : 47- 48: aqaqq QL plesl CD2L_HUMAN : 61- 62: dvael QL nhtgp CD2L_HUMAN : 95- 96: eldkg QL rihrd CD3L_HUMAN : 144- 145: yfiic QL qflvq CD3L_MOUSE : 149- 150: yfivc QL qflvq CD3L_MOUSE : 166- 167: vdltl QL linsk CD4L_HUMAN : 160- 161: lengk QL tvkrq CD4L_MOUSE : 159- 160: lengk QL tvkre CD4L_MOUSE : 215- 216: thsss QL ceqqs FASL_MOUSE : 101- 102: glgmy QL fhlqk FASL_MOUSE : 261- 262: yvnis QL slinf FASL_RAT : 100- 101: glgmy QL fhlqk FASL_RAT : 260- 261: yvnis QL slinf OX4L_HUMAN : 128- 129: eeplf QL kkvrs OX4L_MOUSE : 49- 50: iyvcl QL ssspa OX4L_MOUSE : 74- 75: rcedg QL fissy OX4L_MOUSE : 177- 178: elivv QL tpgyc TNFA_BOVIN : 101- 102: inspg QL rwwds TNFA_BOVIN : 123- 124: kledn QL vvpad TNFA_BOVIN : 201- 202: qggvf QL ekgdr TNFA_CAPHI : 62- 63: isapg QL rwgds TNFA_CAPHI : 84- 85: elkdn QL vvptd TNFA_CAPHI : 161- 162: qggvf QL ekgdr TNFA_FELCA : 68- 69: lphgl QL inplp TNFA_FELCA : 101- 102: peaeg QL qrlsr TNFA_FELCA : 123- 124: eltdn QL kvpsd TNFA_FELCA : 201- 202: lggvf QL ekgdr TNFA_HORSE : 63- 64: pqree QL pnafq TNFA_HORSE : 102- 103: pqaeg QL qwlsg TNFA_HORSE : 124- 125: kltdn QL vvpld TNFA_HORSE : 202- 203: lggvf QL ekgdq TNFA_HORSE : 208- 209: lekgd QL saein TNFA_HUMAN : 101- 102: pqaeg QL qwlnr TNFA_HUMAN : 123- 124: elrdn QL vvpse TNFA_HUMAN : 201- 202: lggvf QL ekgdr TNFA_MOUSE : 104- 105: hqvee QL ewlsq TNFA_MOUSE : 126- 127: dlkdn QL vvpad TNFA_MOUSE : 203- 204: lggvf QL ekgdq TNFA_MOUSE : 209- 210: lekgd QL saevn TNFA_PAPSP : 101- 102: pqaeg QL qwlnr TNFA_PAPSP : 123- 124: elrdn QL vvpse TNFA_PAPSP : 201- 202: lggvf QL ekgdr TNFA_PERLE : 104- 105: hqvde QL ewlsr TNFA_PERLE : 126- 127: dlkdn QL vipad TNFA_PERLE : 203- 204: lggvf QL ekgdr TNFA_PIG : 100- 101: vkaeg QL qwqsg TNFA_PIG : 122- 123: klkdn QL vvptd TNFA_PIG : 200- 201: lggvf QL ekddr TNFA_RABIT : 104- 105: pqveg QL qwlsq TNFA_RABIT : 126- 127: kltdn QL vvpad TNFA_RABIT : 203- 204: lggvf QL ekgdr TNFA_RAT : 104- 105: hqaee QL ewlsq TNFA_RAT : 126- 127: dlkdn QL vvpad TNFA_RAT : 203- 204: lggvf QL ekgdl TNFA_SHEEP : 102- 103: isapg QL rwgds TNFA_SHEEP : 124- 125: elkdn QL vvptd TNFA_SHEEP : 202- 203: qggvf QL ekgdr TNFB_BOVIN : 50- 51: qpahq QL ptpft TNFB_BOVIN : 135- 136: lahev QL fspqy TNFB_BOVIN : 179- 180: ltrgd QL sthtd TNFB_HUMAN : 136- 137: lahev QL fssqy TNFB_HUMAN : 174- 175: hgaaf QL tqgdq TNFB_HUMAN : 180- 181: ltqgd QL sthtd TNFB_MOUSE : 133- 134: lahev QL fssqy TNFB_MOUSE : 177- 178: lskgd QL sthtd TNFB_PIG : 135- 136: lahev QL fssqy TNFB_PIG : 179- 180: ltqgd QL sthtd TNFB_RABIT : 128- 129: lahev QL fssqy TNFB_RABIT : 172- 173: ltqgd QL sthtd TNFB_RAT : 133- 134: lahev QL fssqy TNFB_RAT : 177- 178: lskgd QL sthtd TNFC_HUMAN : 212- 213: fgglv QL rrger TNFC_MOUSE : 139- 140: dpgvq QL pkgep TNFC_MOUSE : 274- 275: fggla QL rsger R 18: 8.3401 126( 31) L-x(4)-L Occurences: 126(31) 41BL_HUMAN : 31- 36: vlpwa LvaglL lllll 41BL_HUMAN : 35- 40: alvag LllllL laaac 41BL_HUMAN : 36- 41: lvagl LllllL aaaca 41BL_HUMAN : 102- 107: aqnvl LidgpL swysd 41BL_HUMAN : 115- 120: ysdpg LagvsL tggls 41BL_HUMAN : 165- 170: svsla LhlqpL rsaag 41BL_MOUSE : 29- 34: sdaal LrdtgL ladaa 41BL_MOUSE : 35- 40: rdtgl LadaaL lsdtv 41BL_MOUSE : 86- 91: pklyg LvalvL lllia 41BL_MOUSE : 89- 94: yglva LvlllL iaacv 41BL_MOUSE : 159- 164: knqas LcnttL nwhsq 41BL_MOUSE : 197- 202: vdspg LyyvfL elkls CD2L_HUMAN : 48- 53: qaqqq LplesL gwdva CD2L_HUMAN : 81- 86: qggpa LgrsfL hgpel CD2L_HUMAN : 86- 91: lgrsf LhgpeL dkgql CD2L_HUMAN : 91- 96: lhgpe LdkgqL rihrd CD2L_HUMAN : 171- 176: tlctn LtgtlL psrnt CD3L_HUMAN : 41- 46: rsyfy LttatL alclv CD3L_HUMAN : 108- 113: qvakh LnktkL swnkd CD3L_HUMAN : 158- 163: nnsvd LklelL inkhi CD3L_HUMAN : 190- 195: hvyqn LsqflL dylqv CD3L_MOUSE : 47- 52: rsyfy LsttaL vclvv CD3L_MOUSE : 113- 118: qvskh LnntkL swned CD3L_MOUSE : 163- 168: nhsvd LtlqlL inski CD3L_MOUSE : 195- 200: niyqn LsqflL hylqv CD4L_HUMAN : 27- 32: kifmy LltvfL itqmi CD4L_HUMAN : 41- 46: migsa LfavyL hrrld CD4L_MOUSE : 27- 32: kifmy LltvfL itqmi CD4L_MOUSE : 41- 46: migsv LfavyL hrrld FASL_MOUSE : 62- 67: ppsqp LplppL tplkk FASL_MOUSE : 92- 97: mvlva LvgmgL gmyql FASL_MOUSE : 97- 102: lvgmg LgmyqL fhlqk FASL_RAT : 91- 96: mvlva LvgmgL gmyql FASL_RAT : 96- 101: lvgmg LgmyqL fhlqk OX4L_HUMAN : 45- 50: ftyic LhfsaL qvshr OX4L_HUMAN : 138- 143: rsvns LmvasL tykdk OX4L_MOUSE : 101- 106: ikcdg LyiiyL kgsff OX4L_MOUSE : 173- 178: indge LivvqL tpgyc TNFA_BOVIN : 12- 17: irdve LaeevL sekag TNFA_BOVIN : 35- 40: clcls LfsflL vagat TNFA_BOVIN : 119- 124: angvk LednqL vvpad TNFA_CAPHI : 8- 13: rshha LlpaaL rgnrp TNFA_CAPHI : 80- 85: angve LkdnqL vvptd TNFA_FELCA : 12- 17: irdve LaeeaL pkkag TNFA_FELCA : 35- 40: clcls LfsflL vagat TNFA_FELCA : 119- 124: angve LtdnqL kvpsd TNFA_HORSE : 12- 17: irdve LaeeeL akkag TNFA_HORSE : 35- 40: clcls LfsflL vagat TNFA_HORSE : 120- 125: angvk LtdnqL vvpld TNFA_HORSE : 129- 134: qlvvp LdglyL iysqv TNFA_HUMAN : 12- 17: irdve LaeeaL pkktg TNFA_HUMAN : 119- 124: angve LrdnqL vvpse TNFA_MOUSE : 12- 17: irdve LaeeaL pqkmg TNFA_MOUSE : 35- 40: clcls LfsflL vagat TNFA_MOUSE : 122- 127: angmd LkdnqL vvpad TNFA_PAPSP : 12- 17: irdve LaeeaL pkktg TNFA_PAPSP : 35- 40: clfls LfsflL vagat TNFA_PAPSP : 119- 124: angve LrdnqL vvpse TNFA_PERLE : 12- 17: irdve LaeeaL pkkaw TNFA_PERLE : 35- 40: clcls LfsflL vagat TNFA_PERLE : 122- 127: angmd LkdnqL vipad TNFA_PIG : 12- 17: irdve LaeeaL akkag TNFA_PIG : 35- 40: clcls LfsflL vagat TNFA_PIG : 68- 73: fpagp LsinpL aqglr TNFA_PIG : 118- 123: angvk LkdnqL vvptd TNFA_RABIT : 12- 17: irdve LaegpL pkkag TNFA_RABIT : 35- 40: clcls LfsflL vagat TNFA_RABIT : 87- 92: sasra LsdkpL ahvva TNFA_RABIT : 122- 127: angmk LtdnqL vvpad TNFA_RAT : 12- 17: irdve LaeeaL pkkmg TNFA_RAT : 35- 40: clcls LfsflL vagat TNFA_RAT : 122- 127: angmd LkdnqL vvpad TNFA_RAT : 204- 209: ggvfq LekgdL lsaev TNFA_SHEEP : 12- 17: irdve LaeevL snkag TNFA_SHEEP : 35- 40: cwcls LfsflL vagat TNFA_SHEEP : 120- 125: angve LkdnqL vvptd TNFB_BOVIN : 18- 23: cstpp LlllgL llalp TNFB_BOVIN : 19- 24: stppl LllglL lalpl TNFB_BOVIN : 20- 25: tppll LlgllL alple TNFB_BOVIN : 24- 29: lllgl LlalpL eaqgl TNFB_BOVIN : 29- 34: llalp LeaqgL rgigl TNFB_BOVIN : 34- 39: leaqg LrgigL tpsaa TNFB_BOVIN : 93- 98: rhgfs LsnnsL lvpts TNFB_HUMAN : 17- 22: vcgtt LhlllL glllv TNFB_HUMAN : 19- 24: gttlh LlllgL llvll TNFB_HUMAN : 20- 25: ttlhl LllglL lvllp TNFB_HUMAN : 21- 26: tlhll LlgllL vllpg TNFB_HUMAN : 24- 29: llllg LllvlL pgaqg TNFB_HUMAN : 35- 40: pgaqg LpgvgL tpsaa TNFB_HUMAN : 56- 61: hpkmh LahstL kpaah TNFB_HUMAN : 94- 99: qdgfs LsnnsL lvpts TNFB_HUMAN : 159- 164: mvypg LqepwL hsmyh TNFB_MOUSE : 4- 9: mtl LgrlhL lrvlg TNFB_MOUSE : 20- 25: tppvf LlgllL alplg TNFB_MOUSE : 24- 29: fllgl LlalpL gaqgl TNFB_MOUSE : 29- 34: llalp LgaqgL sgvrf TNFB_MOUSE : 48- 53: rtahp LpqkhL thgil TNFB_MOUSE : 53- 58: lpqkh LthgiL kpaah TNFB_MOUSE : 91- 96: rhgfs LsnnsL lipts TNFB_PIG : 18- 23: cstpi LlllgL llalp TNFB_PIG : 19- 24: stpil LllglL lalpp TNFB_PIG : 20- 25: tpill LlgllL alppe TNFB_PIG : 34- 39: peaqg LpgvgL ppsaa TNFB_PIG : 55- 60: hppkh LargtL kpaah TNFB_PIG : 87- 92: tdraf LrhgfL lsnns TNFB_PIG : 93- 98: rhgfl LsnnsL lvpts TNFB_RABIT : 7- 12: tppgr LylplL lglll TNFB_RABIT : 11- 16: rlylp LllglL lappp TNFB_RABIT : 12- 17: lylpl LlgllL apppp TNFB_RABIT : 86- 91: rhgfs LsnnsL lvpss TNFB_RAT : 4- 9: mtp LgrlhL lrvls TNFB_RAT : 20- 25: tppvf LlgllL alplg TNFB_RAT : 24- 29: fllgl LlalpL gaqgl TNFB_RAT : 29- 34: llalp LgaqgL sgvrf TNFB_RAT : 53- 58: ppqkh LthglL kpaah TNFB_RAT : 91- 96: rhgfs LnnnsL lipts TNFC_HUMAN : 29- 34: agats LvtllL avpit TNFC_HUMAN : 41- 46: vpitv LavlaL vpqdq TNFC_HUMAN : 69- 74: qaqqg LgfqkL peeep TNFC_HUMAN : 87- 92: dlspg LpaahL igapl TNFC_HUMAN : 92- 97: lpaah LigapL kgqgl TNFC_HUMAN : 97- 102: ligap LkgqgL gwett TNFC_HUMAN : 127- 132: aegla LpqdgL yylyc TNFC_MOUSE : 29- 34: agats LvtllL avpit TNFC_MOUSE : 41- 46: vpitv LavlaL vpqdq TNFC_MOUSE : 153- 158: dlnpe LpaahL igawm S 19: 8.3401 133( 31) L-x(3)-L Occurences: 133(31) 41BL_HUMAN : 27- 31: racrv LpwaL vagll 41BL_HUMAN : 31- 35: vlpwa LvagL lllll 41BL_HUMAN : 35- 39: alvag LlllL llaaa 41BL_HUMAN : 36- 40: lvagl LlllL laaac 41BL_HUMAN : 37- 41: vagll LlllL aaaca 41BL_HUMAN : 120- 124: lagvs LtggL syked 41BL_HUMAN : 163- 167: sgsvs LalhL qplrs 41BL_HUMAN : 181- 185: aaala LtvdL ppass 41BL_HUMAN : 212- 216: sagqr LgvhL htear 41BL_MOUSE : 89- 93: yglva LvllL liaac 41BL_MOUSE : 177- 181: agssy LsqgL ryeed 41BL_MOUSE : 202- 206: lyyvf LelkL sptft 41BL_MOUSE : 239- 243: fdnla LtveL fpcsm 41BL_MOUSE : 269- 273: kaghr LsvgL raylh 41BL_MOUSE : 273- 277: rlsvg LrayL hgaqd CD2L_HUMAN : 19- 23: pygcv LraaL vplva CD2L_HUMAN : 26- 30: aalvp LvagL viclv CD2L_HUMAN : 30- 34: plvag LvicL vvciq CD2L_HUMAN : 167- 171: argdt LctnL tgtll CD2L_HUMAN : 171- 175: tlctn LtgtL lpsrn CD3L_HUMAN : 5- 9: mdpg LqqaL ngmap CD3L_HUMAN : 46- 50: lttat LalcL vftva CD3L_HUMAN : 86- 90: ncsed LlciL krapf CD3L_HUMAN : 158- 162: nnsvd LkleL linkh CD3L_HUMAN : 190- 194: hvyqn LsqfL ldylq CD3L_HUMAN : 194- 198: nlsqf LldyL qvntt CD3L_HUMAN : 221- 225: tstfp LenvL sifly CD3L_HUMAN : 225- 229: plenv LsifL ysnsd CD3L_MOUSE : 91- 95: ncsed LfctL kstps CD3L_MOUSE : 163- 167: nhsvd LtlqL linsk CD3L_MOUSE : 195- 199: niyqn LsqfL lhylq CD3L_MOUSE : 199- 203: nlsqf LlhyL qvnst CD3L_MOUSE : 226- 230: tntfp LdnvL svfly CD3L_MOUSE : 230- 234: pldnv LsvfL ysssd CD4L_HUMAN : 28- 32: ifmyl LtvfL itqmi CD4L_HUMAN : 46- 50: lfavy LhrrL dkied CD4L_MOUSE : 28- 32: ifmyl LtvfL itqmi CD4L_MOUSE : 46- 50: lfavy LhrrL dkvee FASL_MOUSE : 105- 109: yqlfh LqkeL aelre FASL_RAT : 104- 108: yqlfh LqkeL aelre OX4L_HUMAN : 34- 38: sviqg LgllL cftyi OX4L_MOUSE : 9- 13: egvqp LdenL engsr OX4L_MOUSE : 162- 166: napdt LcehL qindg TNFA_BOVIN : 31- 35: gsrsc LclsL fsfll TNFA_BOVIN : 35- 39: clcls LfsfL lvaga TNFA_BOVIN : 47- 51: agatt LfclL hfgvi TNFA_BOVIN : 73- 77: sinsp LvqtL rsssq TNFA_BOVIN : 214- 218: saein LpdyL dyaes TNFA_CAPHI : 9- 13: shhal LpaaL rgnrp TNFA_CAPHI : 34- 38: sfnrp LvqtL rsssq TNFA_FELCA : 31- 35: gsgrc LclsL fsfll TNFA_FELCA : 35- 39: clcls LfsfL lvaga TNFA_FELCA : 47- 51: agatt LfclL hfgvi TNFA_FELCA : 63- 67: pqree LphgL qlinp TNFA_FELCA : 69- 73: phglq LinpL pqtlr TNFA_FELCA : 73- 77: qlinp LpqtL rsssr TNFA_FELCA : 214- 218: stein LpayL dfaes TNFA_HORSE : 31- 35: gsrrc LclsL fsfll TNFA_HORSE : 35- 39: clcls LfsfL lvaga TNFA_HORSE : 47- 51: agatt LfclL hfgvi TNFA_HORSE : 74- 78: qsinp LaqtL rsssr TNFA_HORSE : 125- 129: ltdnq LvvpL dglyl TNFA_HUMAN : 31- 35: gsrrc LflsL fsfli TNFA_HUMAN : 35- 39: clfls LfsfL ivaga TNFA_HUMAN : 47- 51: agatt LfclL hfgvi TNFA_HUMAN : 69- 73: prdls LispL aqavr TNFA_MOUSE : 31- 35: nsrrc LclsL fsfll TNFA_MOUSE : 35- 39: clcls LfsfL lvaga TNFA_MOUSE : 47- 51: agatt LfclL nfgvi TNFA_MOUSE : 216- 220: saevn LpkyL dfaes TNFA_PAPSP : 31- 35: gsrrc LflsL fsfll TNFA_PAPSP : 35- 39: clfls LfsfL lvaga TNFA_PAPSP : 47- 51: agatt LfclL hfgvi TNFA_PAPSP : 69- 73: pkdps LispL aqavr TNFA_PAPSP : 214- 218: saein LpdyL dfaes TNFA_PERLE : 31- 35: nssrc LclsL fsfll TNFA_PERLE : 35- 39: clcls LfsfL lvaga TNFA_PERLE : 47- 51: agatt LfclL nfgvi TNFA_PERLE : 216- 220: saevn LpkyL dfaes TNFA_PIG : 31- 35: gsrrc LclsL fsfll TNFA_PIG : 35- 39: clcls LfsfL lvaga TNFA_PIG : 47- 51: agatt LfclL hfevi TNFA_PIG : 73- 77: lsinp LaqgL rsssq TNFA_PIG : 213- 217: saein LpdyL dfaes TNFA_RABIT : 31- 35: gskrc LclsL fsfll TNFA_RABIT : 35- 39: clcls LfsfL lvaga TNFA_RABIT : 47- 51: agatt LfclL hfrvi TNFA_RAT : 31- 35: nsrrc LclsL fsfll TNFA_RAT : 35- 39: clcls LfsfL lvaga TNFA_RAT : 47- 51: agatt LfclL nfgvi TNFA_RAT : 216- 220: saevn LpkyL dites TNFA_SHEEP : 35- 39: cwcls LfsfL lvaga TNFA_SHEEP : 47- 51: agatt LfclL hfgvi TNFA_SHEEP : 74- 78: sfnrp LvqtL rsssq TNFA_SHEEP : 215- 219: saein LpeyL dyaes TNFB_BOVIN : 19- 23: stppl LllgL llalp TNFB_BOVIN : 20- 24: tppll LlglL lalpl TNFB_BOVIN : 21- 25: pplll LgllL alple TNFB_BOVIN : 23- 27: llllg LllaL pleaq TNFB_BOVIN : 25- 29: llgll LalpL eaqgl TNFB_HUMAN : 17- 21: vcgtt LhllL lglll TNFB_HUMAN : 20- 24: ttlhl LllgL llvll TNFB_HUMAN : 21- 25: tlhll LlglL lvllp TNFB_HUMAN : 22- 26: lhlll LgllL vllpg TNFB_HUMAN : 24- 28: llllg LllvL lpgaq TNFB_HUMAN : 25- 29: lllgl LlvlL pgaqg TNFB_MOUSE : 3- 7: mt LlgrL hllrv TNFB_MOUSE : 9- 13: lgrlh LlrvL gtppv TNFB_MOUSE : 20- 24: tppvf LlglL lalpl TNFB_MOUSE : 21- 25: ppvfl LgllL alplg TNFB_MOUSE : 23- 27: vfllg LllaL plgaq TNFB_MOUSE : 25- 29: llgll LalpL gaqgl TNFB_PIG : 19- 23: stpil LllgL llalp TNFB_PIG : 20- 24: tpill LlglL lalpp TNFB_PIG : 21- 25: pilll LgllL alppe TNFB_PIG : 23- 27: llllg LllaL ppeaq TNFB_RABIT : 7- 11: tppgr LylpL llgll TNFB_RABIT : 9- 13: pgrly LpllL gllla TNFB_RABIT : 11- 15: rlylp LllgL llapp TNFB_RABIT : 12- 16: lylpl LlglL lappp TNFB_RABIT : 13- 17: ylpll LgllL apppp TNFB_RAT : 9- 13: lgrlh LlrvL stppv TNFB_RAT : 20- 24: tppvf LlglL lalpl TNFB_RAT : 21- 25: ppvfl LgllL alplg TNFB_RAT : 23- 27: vfllg LllaL plgaq TNFB_RAT : 25- 29: llgll LalpL gaqgl TNFB_RAT : 53- 57: ppqkh LthgL lkpaa TNFC_HUMAN : 29- 33: agats LvtlL lavpi TNFC_HUMAN : 83- 87: epetd LspgL paahl TNFC_HUMAN : 159- 163: grsvt LrssL yragg TNFC_MOUSE : 29- 33: agats LvtlL lavpi TNFC_MOUSE : 149- 153: epetd LnpeL paahl TNFC_MOUSE : 224- 228: arslt LrsaL yragg T 20: 8.3401 82( 31) L-V Occurences: 82(31) 41BL_HUMAN : 31- 32: vlpwa LV aglll 41BL_HUMAN : 95- 96: gmfaq LV aqnvl 41BL_HUMAN : 133- 134: edtke LV vakag 41BL_MOUSE : 86- 87: pklyg LV alvll 41BL_MOUSE : 89- 90: yglva LV lllli 41BL_MOUSE : 190- 191: edkke LV vdspg 41BL_MOUSE : 223- 224: qgwvs LV lqakp 41BL_MOUSE : 252- 253: smenk LV drsws 41BL_MOUSE : 301- 302: sfglf LV kpdnp CD2L_HUMAN : 23- 24: vlraa LV plvag CD2L_HUMAN : 26- 27: aalvp LV aglvi CD2L_HUMAN : 30- 31: plvag LV iclvv CD2L_HUMAN : 34- 35: glvic LV vciqr CD3L_HUMAN : 50- 51: tlalc LV ftvat CD3L_HUMAN : 60- 61: atimv LV vqrtd CD3L_HUMAN : 131- 132: yqdgn LV iqfpg CD3L_HUMAN : 148- 149: cqlqf LV qcpnn CD3L_HUMAN : 173- 174: ikkqa LV tvces CD3L_MOUSE : 52- 53: lstta LV clvva CD3L_MOUSE : 55- 56: talvc LV vavai CD3L_MOUSE : 63- 64: avaii LV lvvqk CD3L_MOUSE : 65- 66: aiilv LV vqkkd CD3L_MOUSE : 153- 154: cqlqf LV qcsnh CD3L_MOUSE : 178- 179: ikkqt LV tvces CD4L_HUMAN : 152- 153: tmsnn LV tleng CD4L_MOUSE : 94- 95: rqfed LV kditl CD4L_MOUSE : 151- 152: tmksn LV mleng FASL_MOUSE : 89- 90: vffmv LV alvgm FASL_MOUSE : 92- 93: mvlva LV gmglg FASL_MOUSE : 179- 180: ykkgg LV inetg FASL_MOUSE : 220- 221: kyped LV lmeek FASL_RAT : 88- 89: iffmv LV alvgm FASL_RAT : 91- 92: mvlva LV gmglg FASL_RAT : 178- 179: ykkgg LV ineag FASL_RAT : 219- 220: kypgd LV lmeek OX4L_HUMAN : 26- 27: rnkll LV asviq OX4L_MOUSE : 29- 30: kktlr LV vsgik TNFA_BOVIN : 40- 41: lfsfl LV agatt TNFA_BOVIN : 73- 74: sinsp LV qtlrs TNFA_BOVIN : 124- 125: lednq LV vpadg TNFA_CAPHI : 34- 35: sfnrp LV qtlrs TNFA_CAPHI : 85- 86: lkdnq LV vptdg TNFA_FELCA : 40- 41: lfsfl LV agatt TNFA_HORSE : 40- 41: lfsfl LV agatt TNFA_HORSE : 125- 126: ltdnq LV vpldg TNFA_HUMAN : 124- 125: lrdnq LV vpseg TNFA_MOUSE : 40- 41: lfsfl LV agatt TNFA_MOUSE : 127- 128: lkdnq LV vpadg TNFA_MOUSE : 136- 137: adgly LV ysqvl TNFA_PAPSP : 40- 41: lfsfl LV agatt TNFA_PAPSP : 124- 125: lrdnq LV vpseg TNFA_PERLE : 40- 41: lfsfl LV agatt TNFA_PERLE : 127- 128: lkdnq LV ipadg TNFA_PERLE : 136- 137: adgly LV ysqvl TNFA_PIG : 40- 41: lfsfl LV agatt TNFA_PIG : 123- 124: lkdnq LV vptdg TNFA_RABIT : 40- 41: lfsfl LV agatt TNFA_RABIT : 70- 71: pnnlh LV npvaq TNFA_RABIT : 127- 128: ltdnq LV vpadg TNFA_RAT : 40- 41: lfsfl LV agatt TNFA_RAT : 127- 128: lkdnq LV vpadg TNFA_SHEEP : 40- 41: lfsfl LV agatt TNFA_SHEEP : 74- 75: sfnrp LV qtlrs TNFA_SHEEP : 125- 126: lkdnq LV vptdg TNFB_BOVIN : 66- 67: kpaah LV gdpst TNFB_BOVIN : 99- 100: snnsl LV ptsgl TNFB_HUMAN : 26- 27: llgll LV llpga TNFB_HUMAN : 100- 101: snnsl LV ptsgi TNFB_HUMAN : 191- 192: dgiph LV lspst TNFB_MOUSE : 64- 65: kpaah LV gypsk TNFB_PIG : 66- 67: kpaah LV gdpst TNFB_PIG : 99- 100: snnsl LV ptsgl TNFB_RABIT : 59- 60: kpaah LV gdpsa TNFB_RABIT : 92- 93: snnsl LV pssgl TNFB_RAT : 64- 65: kpaah LV gypsk TNFC_HUMAN : 29- 30: agats LV tllla TNFC_HUMAN : 46- 47: lavla LV pqdqg TNFC_HUMAN : 54- 55: qdqgg LV tetad TNFC_HUMAN : 138- 139: yylyc LV gyrgr TNFC_HUMAN : 210- 211: vgfgg LV qlrrg TNFC_MOUSE : 29- 30: agats LV tllla TNFC_MOUSE : 46- 47: lavla LV pqdqg Number of patterns evaluated by Pratt:450 Total running time: 1 seconds