------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 28 sequences from file THIOLASE_3 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 28 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename THIOLASE_3.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: NLTP_MOUSE 547 NLTP_RAT 547 THI1_RAT 424 THI2_RAT 434 THIK_CANTR 408 THIK_ECOLI 387 THIK_HUMAN 424 THIK_PSEFR 390 THIK_YARLI 414 THIK_YEAST 417 THIL_ALCEU 393 THIL_BACSU 393 THIL_CANTR 408 THIL_CHRVI 394 THIL_CLOAB 392 THIL_CLODI 112 THIL_HAEIN 393 THIL_HUMAN 427 THIL_MYCLE 393 THIL_RAT 424 THIL_SACUV 398 THIL_THIVI 394 THIL_YEAST 398 THIL_ZOORA 391 THIM_CANTR 403 THIM_HUMAN 397 THIM_RAT 397 YKA3_CAEEL 448 Pratt run started at Thu Feb 6 21:26:19 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 15.6802 30( 28) G-x(4)-G-x(1,3)-G-x(4)-R 2: 15.6802 28( 28) G-G-x(4)-G-x(1,3)-G 3: 12.0102 34( 28) G-x(1,2)-G-x-R 4: 12.0102 55( 28) A-x(2)-A-x(0,1)-G 5: 12.0102 48( 28) A-x-Q-x(1,2)-A 6: 12.0102 67( 28) A-x(5)-G-x(1,2)-G 7: 12.0102 76( 28) G-x(3)-A-x(4,5)-L 8: 12.0102 79( 28) G-x(2,3)-A-x(3)-A 9: 12.0102 75( 28) G-x-G-x(2,3)-A 10: 12.0102 38( 28) G-x(3)-A-x(0,1)-L 11: 12.0102 57( 28) G-x(3,4)-A-x(2)-A 12: 12.0102 41( 28) A-x(3,4)-S-x(4)-G 13: 12.0102 63( 28) G-x(2,3)-G-A 14: 12.0102 78( 28) A-x(1,2)-A-x(5)-G 15: 12.0102 63( 28) A-x(4,5)-G-x(2)-G 16: 12.0102 57( 28) A-x(5)-G-x(2,3)-G 17: 11.5102 50( 28) N-x(2,3)-G-x(0,1)-G 18: 11.5102 44( 28) G-x(0,1)-P-x(4,5)-A 19: 11.5102 63( 28) A-x(0,1)-G-x(1,2)-P 20: 11.5102 58( 28) L-x(1,2)-A-x(0,1)-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 26.9032 28( 28) N-x(2,3)-G-x(0,1)-G-x(2)-[AS]-x(3)-[AGLP]-x-[GQT]-x-[ST]-G B 2: 26.8619 28( 28) G-G-x-[ILV]-[AST]-x-G-x(1,3)-G-x-[NST]-[GI] C 3: 22.4678 28( 28) G-x(2)-[APST]-x-G-x(1,3)-G-x(2)-[GIV]-[ACDSV]-R D 4: 17.3399 35( 28) G-x(3,4)-A-x(2)-A-x(4)-[ADEGNQT]-[GILV]-x(4)-[AGILPV] E 5: 16.8575 38( 28) A-x(3)-[ANP]-x-G-x(1,2)-G-[AGSV] F 6: 16.1481 51( 28) G-x-[AGNSV]-x-A-x(4,5)-L-x(3)-[AGIL] G 7: 14.6762 49( 28) A-x(1,2)-A-x-[GQT]-x(3)-G H 8: 14.6091 44( 28) A-x(4,5)-G-x(2)-G-[AGV] I 9: 13.7494 41( 28) L-x(1,2)-A-x(0,1)-G-[AILV] J 10: 13.6387 32( 28) A-x(3,4)-S-x(4)-G-x-[ADGPST] K 11: 13.3931 47( 28) A-x(0,1)-G-x(1,2)-P-x-[AEGST] L 12: 12.0102 34( 28) G-x(1,2)-G-x-R M 13: 12.0102 55( 28) A-x(2)-A-x(0,1)-G N 14: 12.0102 48( 28) A-x-Q-x(1,2)-A O 15: 12.0102 79( 28) G-x(2,3)-A-x(3)-A P 16: 12.0102 75( 28) G-x-G-x(2,3)-A Q 17: 12.0102 38( 28) G-x(3)-A-x(0,1)-L R 18: 12.0102 63( 28) G-x(2,3)-G-A S 19: 12.0102 57( 28) A-x(5)-G-x(2,3)-G T 20: 11.5102 50( 28) N-x(2,3)-G-x(0,1)-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 26.9032 28( 28) N-x(2,3)-G-x(0,1)-G-x(2)-[AS]-x(3)-[AGLP]-x-[GQT]-x-[ST]-G Occurences: 28(28) NLTP_MOUSE : 345- 361: gkwvi Nps-G-GliSkghPlGaTG laqca NLTP_RAT : 345- 361: gkwvi Nps-G-GliSkghPlGaTG laqca THI1_RAT : 367- 383: paekv Npl-G-GaiAlghPlGcTG arqvv THI2_RAT : 377- 393: paekv Npl-G-GaiAlghPlGcTG arqvv THIK_CANTR : 356- 372: peekl Nin-G-GaiAlghPlGeTG arqya THIK_ECOLI : 333- 349: ideki Nln-G-GaiAlghPlGcSG arist THIK_HUMAN : 367- 383: ppekv Npl-G-GavAlghPlGcTG arqvi THIK_PSEFR : 336- 352: mnekv Nlh-G-GaiAlghPfGcSG arisg THIK_YARLI : 360- 376: deskv Npr-G-GaiAighPlGaTG arqfa THIK_YEAST : 365- 381: dlnkv Npr-G-GaiAlghPlGcTG arqva THIL_ALCEU : 339- 355: dtskv Nvn-G-GaiAighPiGaSG crilv THIL_BACSU : 339- 355: dlekv Nvn-G-GaiAlghPiGaSG arilm THIL_CANTR : 356- 372: peekl Nin-G-GaiAlghPlGeTG arqya THIL_CHRVI : 340- 356: dlskv Nvn-G-GaiAighPiGaSG arvlv THIL_CLOAB : 338- 354: dmnkv Nvn-G-GaiAlghPiGaSG arilv THIL_CLODI : 90- 108: pamti NivcGsGlrSwraLrTrTG prrr THIL_HAEIN : 339- 355: dmnkt Nih-G-GaiAlghPiGaSG arilv THIL_HUMAN : 375- 391: dpqkv Nin-G-GavSlghPiGmSG arivg THIL_MYCLE : 339- 355: apelv Nvn-G-GaiAvghPlGmSG aritl THIL_RAT : 372- 388: dpqkv Nvh-G-GavSlghPiGmSG arivv THIL_SACUV : 344- 360: dpskv Nvy-G-GavAlghPlGcSG arvvv THIL_THIVI : 340- 356: dlskv Nvn-G-GaiAighPiGaSG arvlv THIL_YEAST : 344- 360: dpskv Nvy-G-GavAlghPlGcSG arvvv THIL_ZOORA : 337- 353: dpsiv Nvn-G-GaiAighPiGaSG ariln THIM_CANTR : 343- 359: plekl Nvy-G-GavAmghPlGcSG ariiv THIM_HUMAN : 342- 358: diskt Nvn-G-GaiAlghPlGgSG srita THIM_RAT : 342- 358: dpskt Nvs-G-GaiAlghPlGgSG srita YKA3_CAEEL : 392- 408: pmdkl Nlw-G-GslSighPfGaTG vrlat B 2: 26.8619 28( 28) G-G-x-[ILV]-[AST]-x-G-x(1,3)-G-x-[NST]-[GI] Occurences: 28(28) NLTP_MOUSE : 348- 361: vinps GGlISkGhplGaTG laqca NLTP_RAT : 348- 361: vinps GGlISkGhplGaTG laqca THI1_RAT : 370- 383: kvnpl GGaIAlGhplGcTG arqvv THI2_RAT : 380- 393: kvnpl GGaIAlGhplGcTG arqvv THIK_CANTR : 359- 372: klnin GGaIAlGhplGeTG arqya THIK_ECOLI : 336- 349: kinln GGaIAlGhplGcSG arist THIK_HUMAN : 370- 383: kvnpl GGaVAlGhplGcTG arqvi THIK_PSEFR : 339- 352: kvnlh GGaIAlGhpfGcSG arisg THIK_YARLI : 363- 376: kvnpr GGaIAiGhplGaTG arqfa THIK_YEAST : 368- 381: kvnpr GGaIAlGhplGcTG arqva THIL_ALCEU : 342- 355: kvnvn GGaIAiGhpiGaSG crilv THIL_BACSU : 342- 355: kvnvn GGaIAlGhpiGaSG arilm THIL_CANTR : 359- 372: klnin GGaIAlGhplGeTG arqya THIL_CHRVI : 343- 356: kvnvn GGaIAiGhpiGaSG arvlv THIL_CLOAB : 341- 354: kvnvn GGaIAlGhpiGaSG arilv THIL_CLODI : 59- 70: desll GGvLTaGl--GqNI arqia THIL_HAEIN : 342- 355: ktnih GGaIAlGhpiGaSG arilv THIL_HUMAN : 378- 391: kvnin GGaVSlGhpiGmSG arivg THIL_MYCLE : 342- 355: lvnvn GGaIAvGhplGmSG aritl THIL_RAT : 375- 388: kvnvh GGaVSlGhpiGmSG arivv THIL_SACUV : 347- 360: kvnvy GGaVAlGhplGcSG arvvv THIL_THIVI : 343- 356: kvnvn GGaIAiGhpiGaSG arvlv THIL_YEAST : 347- 360: kvnvy GGaVAlGhplGcSG arvvv THIL_ZOORA : 340- 353: ivnvn GGaIAiGhpiGaSG ariln THIM_CANTR : 346- 359: klnvy GGaVAmGhplGcSG ariiv THIM_HUMAN : 345- 358: ktnvn GGaIAlGhplGgSG srita THIM_RAT : 345- 358: ktnvs GGaIAlGhplGgSG srita YKA3_CAEEL : 395- 408: klnlw GGsLSiGhpfGaTG vrlat C 3: 22.4678 28( 28) G-x(2)-[APST]-x-G-x(1,3)-G-x(2)-[GIV]-[ACDSV]-R Occurences: 28(28) NLTP_MOUSE : 320- 333: tyeal GlcPeGqg-GtlVDR gdnty NLTP_RAT : 320- 333: tyeal GlcPeGqg-GalVDR gdnty THI1_RAT : 371- 385: vnplg GaiAlGhplGctGAR qvvtl THI2_RAT : 381- 395: vnplg GaiAlGhplGctGAR qvvtl THIK_CANTR : 360- 374: lning GaiAlGhplGetGAR qyati THIK_ECOLI : 337- 351: inlng GaiAlGhplGcsGAR isttl THIK_HUMAN : 371- 385: vnplg GavAlGhplGctGAR qvitl THIK_PSEFR : 340- 354: vnlhg GaiAlGhpfGcsGAR isgtl THIK_YARLI : 364- 378: vnprg GaiAiGhplGatGAR qfatl THIK_YEAST : 369- 383: vnprg GaiAlGhplGctGAR qvati THIL_ALCEU : 343- 357: vnvng GaiAiGhpiGasGCR ilvtl THIL_BACSU : 343- 357: vnvng GaiAlGhpiGasGAR ilmtl THIL_CANTR : 360- 374: lning GaiAlGhplGetGAR qyati THIL_CHRVI : 344- 358: vnvng GaiAiGhpiGasGAR vlvtl THIL_CLOAB : 342- 356: vnvng GaiAlGhpiGasGAR ilvtl THIL_CLODI : 60- 72: esllg GvlTaGl--GqnIAR qialg THIL_HAEIN : 343- 357: tnihg GaiAlGhpiGasGAR ilvtl THIL_HUMAN : 379- 393: vning GavSlGhpiGmsGAR ivghl THIL_MYCLE : 343- 357: vnvng GaiAvGhplGmsGAR itlhv THIL_RAT : 376- 390: vnvhg GavSlGhpiGmsGAR ivvhl THIL_SACUV : 348- 362: vnvyg GavAlGhplGcsGAR vvvtl THIL_THIVI : 344- 358: vnvng GaiAiGhpiGasGAR vlvtl THIL_YEAST : 348- 362: vnvyg GavAlGhplGcsGAR vvvtl THIL_ZOORA : 341- 355: vnvng GaiAiGhpiGasGAR ilntl THIM_CANTR : 347- 361: lnvyg GavAmGhplGcsGAR iivtl THIM_HUMAN : 346- 360: tnvng GaiAlGhplGgsGSR itahl THIM_RAT : 346- 360: tnvsg GaiAlGhplGgsGSR itahl YKA3_CAEEL : 396- 410: lnlwg GslSiGhpfGatGVR laths D 4: 17.3399 35( 28) G-x(3,4)-A-x(2)-A-x(4)-[ADEGNQT]-[GILV]-x(4)-[AGILPV] Occurences: 35(28) NLTP_MOUSE : 358- 377: kghpl GatglAqcAelcwQLrgeaG krqvp NLTP_RAT : 358- 377: kghpl GatglAqcAelcwQLrgeaG krqvp THI1_RAT : 97- 115: lqpga Gaam-AriAqflsGIpetvP lsavn THI1_RAT : 126- 145: rqcss GlqavAniAggirNGsydiG macgv THI2_RAT : 107- 125: lepga Gavm-AriAqflsGIpetvP lsavn THI2_RAT : 136- 155: rqcss GlqavAniAggirNGsydiG macgv THIK_CANTR : 257- 275: rpafd Gttt-AgnAsqvsDGaaavL lmkrs THIK_ECOLI : 65- 83: qtleq Gfni-ArnAallaEVphsvP avtvn THIK_HUMAN : 97- 115: lqpga Gaim-AriAqflsDIpetvP lstvn THIK_HUMAN : 126- 145: rqcss GlqavAsiAggirNGsydiG macgv THIK_PSEFR : 68- 86: qtleq Gwni-ArmAslmtQIphtsA aqtvs THIK_YARLI : 261- 279: afsae Gtth-AgnAsqisDGagavL lmrrs THIK_YEAST : 266- 284: fikdr Gttt-AgnAsqvsDGvagvL larrs THIL_ALCEU : 62- 80: ltags Gqnp-ArqAaikaGLpamvP amtin THIL_ALCEU : 240- 258: afdka Gtvt-AanAsglnDGaaavV vmsaa THIL_BACSU : 240- 258: iyasd Gsit-AgnApgvnDGagafV lmsee THIL_CANTR : 257- 275: rpafd Gttt-AgnAsqvsDGaaavL lmkrs THIL_CHRVI : 241- 259: afskd Gsvt-AgnAsginDGaamvV vmkes THIL_CLOAB : 62- 80: lqagl Gqnp-ArqAsfkaGLpveiP amtin THIL_CLODI : 35- 53: savel Gvta-AkeAikraNItpdmI desll THIL_HAEIN : 62- 80: lqagl Gqnp-ArqAalkaGIekeiP sltin THIL_HAEIN : 240- 258: afkke Gtvt-AgnAsginDGaaalI lvses THIL_HAEIN : 348- 367: gaial GhpigAsgArilvTLlhnlI ekdkk THIL_HUMAN : 276- 294: fqken Gtvt-AanAstlnDGaaalV lmtad THIL_MYCLE : 62- 80: ltaga Gqmp-ArqAavaaGIgwdvP altin THIL_RAT : 273- 291: fqken Gtvt-AanAstlnDGaaavV lmtae THIL_SACUV : 244- 262: fqren Gtvt-AanAspinDGaaaiI lvser THIL_THIVI : 16- 35: grtai GtfggAlsAlqatDIgttvL kalie THIL_THIVI : 241- 259: afdkq Gtvt-AgnAsginDGaamvV vmkes THIL_YEAST : 244- 262: fqken Gtvt-AanAspinDGaaavI lvsek THIL_ZOORA : 238- 256: afdke Gtvt-AgnAsglnDGaaaaL lmsea THIM_CANTR : 244- 262: fqken Gtvt-ApnAsklnDGgaalV lvsea THIM_HUMAN : 243- 261: vfkkd Gtvt-AgnAsgvaDGagavI iased THIM_RAT : 243- 261: vfkke Gtvt-AgnAsgmsDGagvvI iased YKA3_CAEEL : 275- 293: fvkph Gtvt-AanAsyltDGasaaL imtee E 5: 16.8575 38( 28) A-x(3)-[ANP]-x-G-x(1,2)-G-[AGSV] Occurences: 38(28) NLTP_MOUSE : 387- 396: pgakv AlqhNlGl-GG avvvt NLTP_MOUSE : 387- 397: pgakv AlqhNlGlgGA vvvtl NLTP_RAT : 387- 396: pgakv AlqhNlGl-GG aavvt NLTP_RAT : 387- 397: pgakv AlqhNlGlgGA avvtl THI1_RAT : 374- 384: lggai AlghPlGctGA rqvvt THI2_RAT : 384- 394: lggai AlghPlGctGA rqvvt THIK_CANTR : 363- 373: nggai AlghPlGetGA rqyat THIK_ECOLI : 340- 350: nggai AlghPlGcsGA ristt THIK_HUMAN : 374- 384: lggav AlghPlGctGA rqvit THIK_PSEFR : 343- 353: hggai AlghPfGcsGA risgt THIK_YARLI : 367- 377: rggai AighPlGatGA rqfat THIK_YEAST : 372- 382: rggai AlghPlGctGA rqvat THIL_ALCEU : 9- 19: vvivs AartAvGkfGG slaki THIL_BACSU : 9- 19: tvivs AartPfGkfGG vlkev THIL_BACSU : 247- 256: itagn ApgvNdGa-GA fvlms THIL_BACSU : 346- 356: nggai AlghPiGasGA rilmt THIL_CANTR : 363- 373: nggai AlghPlGetGA rqyat THIL_CHRVI : 10- 20: ivivd AgrsAiGtfGG slssl THIL_CHRVI : 347- 357: nggai AighPiGasGA rvlvt THIL_CLOAB : 345- 355: nggai AlghPiGasGA rilvt THIL_CLODI : 14- 24: vvias AartAvGsfGG afksv THIL_HAEIN : 346- 356: hggai AlghPiGasGA rilvt THIL_HUMAN : 410- 419: geygl AsicNgGg-GA samli THIL_MYCLE : 346- 356: nggai AvghPlGmsGA ritlh THIL_RAT : 407- 416: gefgl AsicNgGg-GA savli THIL_SACUV : 351- 361: yggav AlghPlGcsGA rvvvt THIL_SACUV : 381- 390: gkigv AaicNgGg-GA ssvvi THIL_THIVI : 10- 20: ivivd AgrtAiGtfGG alsal THIL_THIVI : 347- 357: nggai AighPiGasGA rvlvt THIL_YEAST : 351- 361: yggav AlghPlGcsGA rvvvt THIL_YEAST : 381- 390: gkigv AaicNgGg-GA ssivi THIL_ZOORA : 344- 354: nggai AighPiGasGA rilnt THIM_CANTR : 350- 360: yggav AmghPlGcsGA riivt THIM_CANTR : 380- 389: grfga AgvcNgGg-GA saivi THIM_HUMAN : 12- 22: vfvva AkrtPfGayGG llkdf THIM_HUMAN : 250- 259: vtagn AsgvAdGa-GA viias THIM_HUMAN : 349- 359: nggai AlghPlGgsGS ritah THIM_RAT : 12- 22: vfiva AkrtPfGayGG llkdf THIM_RAT : 349- 359: sggai AlghPlGgsGS ritah YKA3_CAEEL : 430- 439: qyavi AacaAgGh-GV gmlie F 6: 16.1481 51( 28) G-x-[AGNSV]-x-A-x(4,5)-L-x(3)-[AGIL] Occurences: 51(28) NLTP_MOUSE : 393- 406: lqhnl GlGgAvvvt-LyrmG fpeaa NLTP_RAT : 393- 406: lqhnl GlGgAavvt-LyrmG fpeaa THI1_RAT : 320- 333: dimgi GpAyAipaa-LqkaG ltvnd THI1_RAT : 370- 383: kvnpl GgAiAlghp-LgctG arqvv THI2_RAT : 330- 343: dimgi GpAyAipaa-LqkaG ltvnd THI2_RAT : 380- 393: kvnpl GgAiAlghp-LgctG arqvv THIK_CANTR : 309- 322: eimgv GpAyAipev-LkrtG ltvdd THIK_CANTR : 359- 372: klnin GgAiAlghp-LgetG arqya THIK_ECOLI : 231- 245: fdpvn GmVtAgtssaLsdgA aamlv THIK_ECOLI : 283- 296: simgy GpVpAskla-LkkaG lsasd THIK_ECOLI : 336- 349: kinln GgAiAlghp-LgcsG arist THIK_HUMAN : 320- 333: dimgi GpAyAipva-LqkaG ltvsd THIK_HUMAN : 370- 383: kvnpl GgAvAlghp-LgctG arqvi THIK_PSEFR : 68- 81: qtleq GwNiArmas-LmtqI phtsa THIK_PSEFR : 286- 299: aimgy GpVpAtqka-LkraG lnmad THIK_YARLI : 313- 326: elmgi GpAyAipav-LedlG ltvnd THIK_YARLI : 363- 376: kvnpr GgAiAighp-LgatG arqfa THIK_YEAST : 318- 331: eimgv GpAyAipkv-LeatG lqvqd THIK_YEAST : 368- 381: kvnpr GgAiAlghp-LgctG arqva THIL_ALCEU : 240- 254: afdka GtVtAanasgLndgA aavvv THIL_BACSU : 352- 366: lghpi GaSgArilmtLvyeL krrgg THIL_CANTR : 309- 322: eimgv GpAfAipev-LkrtG ltvdd THIL_CANTR : 359- 372: klnin GgAiAlghp-LgetG arqya THIL_CHRVI : 63- 76: ltagv GqNpArqtt-LhagL phsvp THIL_CLOAB : 239- 253: afkkd GtVtAgnasgLndcA avlvi THIL_CLODI : 67- 80: ltagl GqNiArqia-LgagI pvekp THIL_HAEIN : 62- 75: lqagl GqNpArqaa-LkagI ekeip THIL_HAEIN : 292- 305: svmgl GpVpAtqka-LkkaG inldd THIL_HAEIN : 352- 366: lghpi GaSgArilvtLlhnL iekdk THIL_HUMAN : 276- 290: fqken GtVtAanastLndgA aalvl THIL_HUMAN : 388- 402: lghpi GmSgArivghLthaL kqgey THIL_MYCLE : 342- 355: lvnvn GgAiAvghp-LgmsG aritl THIL_RAT : 273- 287: fqken GtVtAanastLndgA aavvl THIL_RAT : 385- 399: lghpi GmSgArivvhLahaL kqgef THIL_SACUV : 65- 78: lsanl GqApArqva-LtagL gnhiv THIL_SACUV : 347- 360: kvnvy GgAvAlghp-LgcsG arvvv THIL_SACUV : 357- 371: lghpl GcSgArvvvtLlsiL qqegg THIL_THIVI : 63- 76: ltagc GqNpArqtt-LmagL phtvp THIL_YEAST : 65- 78: lsanl GqApArqva-LaagL snhiv THIL_YEAST : 347- 360: kvnvy GgAvAlghp-LgcsG arvvv THIL_YEAST : 357- 371: lghpl GcSgArvvvtLlsiL qqegg THIL_ZOORA : 238- 252: afdke GtVtAgnasgLndgA aaall THIM_CANTR : 65- 78: lqanv GqApArqva-LkagL pdsii THIM_CANTR : 244- 258: fqken GtVtApnaskLndgG aalvl THIM_CANTR : 346- 359: klnvy GgAvAmghp-LgcsG ariiv THIM_CANTR : 356- 370: mghpl GcSgAriivtLlsvL tqegg THIM_HUMAN : 295- 308: simgi GpVpAisga-LkkaG lslkd THIM_HUMAN : 345- 358: ktnvn GgAiAlghp-LggsG srita THIM_RAT : 295- 308: aimgi GpVpAitga-LkkaG lslkd THIM_RAT : 345- 358: ktnvs GgAiAlghp-LggsG srita YKA3_CAEEL : 275- 289: fvkph GtVtAanasyLtdgA saali G 7: 14.6762 49( 28) A-x(1,2)-A-x-[GQT]-x(3)-G Occurences: 49(28) NLTP_MOUSE : 384- 393: rqvpg AkvAlQhnlG lggav NLTP_RAT : 384- 393: rqvpg AkvAlQhnlG lggaa THI1_RAT : 131- 140: glqav AniAgGirnG sydig THI1_RAT : 372- 380: nplgg Ai-AlGhplG ctgar THI2_RAT : 141- 150: glqav AniAgGirnG sydig THI2_RAT : 382- 390: nplgg Ai-AlGhplG ctgar THIK_CANTR : 261- 270: dgttt AgnAsQvsdG aaavl THIK_CANTR : 361- 369: ningg Ai-AlGhplG etgar THIK_ECOLI : 338- 346: nlngg Ai-AlGhplG csgar THIK_HUMAN : 131- 140: glqav AsiAgGirnG sydig THIK_HUMAN : 372- 380: nplgg Av-AlGhplG ctgar THIK_PSEFR : 341- 349: nlhgg Ai-AlGhpfG csgar THIK_YARLI : 265- 274: egtth AgnAsQisdG agavl THIK_YARLI : 365- 373: nprgg Ai-AiGhplG atgar THIK_YEAST : 270- 279: rgttt AgnAsQvsdG vagvl THIK_YEAST : 370- 378: nprgg Ai-AlGhplG ctgar THIL_ALCEU : 10- 19: vivsa ArtAvGkfgG slaki THIL_ALCEU : 244- 253: agtvt AanAsGlndG aaavv THIL_ALCEU : 245- 253: gtvta An-AsGlndG aaavv THIL_ALCEU : 344- 352: nvngg Ai-AiGhpiG asgcr THIL_BACSU : 244- 253: dgsit AgnApGvndG agafv THIL_BACSU : 344- 352: nvngg Ai-AlGhpiG asgar THIL_CANTR : 261- 270: dgttt AgnAsQvsdG aaavl THIL_CANTR : 361- 369: ningg Ai-AlGhplG etgar THIL_CHRVI : 245- 254: dgsvt AgnAsGindG aamvv THIL_CHRVI : 345- 353: nvngg Ai-AiGhpiG asgar THIL_CLOAB : 343- 351: nvngg Ai-AlGhpiG asgar THIL_CLODI : 15- 24: viasa ArtAvGsfgG afksv THIL_HAEIN : 244- 253: egtvt AgnAsGindG aaali THIL_HAEIN : 344- 352: nihgg Ai-AlGhpiG asgar THIL_HUMAN : 280- 289: ngtvt AanAsTlndG aaalv THIL_HUMAN : 281- 289: gtvta An-AsTlndG aaalv THIL_MYCLE : 344- 352: nvngg Ai-AvGhplG msgar THIL_RAT : 277- 286: ngtvt AanAsTlndG aaavv THIL_RAT : 278- 286: gtvta An-AsTlndG aaavv THIL_SACUV : 349- 357: nvygg Av-AlGhplG csgar THIL_THIVI : 245- 254: qgtvt AgnAsGindG aamvv THIL_THIVI : 345- 353: nvngg Ai-AiGhpiG asgar THIL_YEAST : 349- 357: nvygg Av-AlGhplG csgar THIL_ZOORA : 10- 19: ivias ArtAvGsfnG afant THIL_ZOORA : 125- 134: maphc AhlAgGvkmG dfkmi THIL_ZOORA : 242- 251: egtvt AgnAsGlndG aaaal THIL_ZOORA : 342- 350: nvngg Ai-AiGhpiG asgar THIM_CANTR : 348- 356: nvygg Av-AmGhplG csgar THIM_HUMAN : 247- 256: dgtvt AgnAsGvadG agavi THIM_HUMAN : 347- 355: nvngg Ai-AlGhplG gsgsr THIM_RAT : 247- 256: egtvt AgnAsGmsdG agvvi THIM_RAT : 347- 355: nvsgg Ai-AlGhplG gsgsr YKA3_CAEEL : 431- 440: yavia AcaAgGhgvG mliea H 8: 14.6091 44( 28) A-x(4,5)-G-x(2)-G-[AGV] Occurences: 44(28) NLTP_MOUSE : 387- 397: pgakv AlqhnlGlgGA vvvtl NLTP_RAT : 387- 397: pgakv AlqhnlGlgGA avvtl THI1_RAT : 374- 384: lggai AlghplGctGA rqvvt THI2_RAT : 384- 394: lggai AlghplGctGA rqvvt THIK_CANTR : 363- 373: nggai AlghplGetGA rqyat THIK_ECOLI : 340- 350: nggai AlghplGcsGA ristt THIK_HUMAN : 374- 384: lggav AlghplGctGA rqvit THIK_PSEFR : 343- 353: hggai AlghpfGcsGA risgt THIK_YARLI : 367- 377: rggai AighplGatGA rqfat THIK_YEAST : 273- 283: ttagn AsqvsdGvaGV llarr THIK_YEAST : 372- 382: rggai AlghplGctGA rqvat THIL_ALCEU : 9- 19: vvivs AartavGkfGG slaki THIL_ALCEU : 10- 19: vivsa Artav-GkfGG slaki THIL_ALCEU : 376- 386: akkgl AslcigGgmGV alave THIL_BACSU : 9- 19: tvivs AartpfGkfGG vlkev THIL_BACSU : 10- 19: vivsa Artpf-GkfGG vlkev THIL_BACSU : 346- 356: nggai AlghpiGasGA rilmt THIL_CANTR : 363- 373: nggai AlghplGetGA rqyat THIL_CHRVI : 10- 20: ivivd AgrsaiGtfGG slssl THIL_CHRVI : 347- 357: nggai AighpiGasGA rvlvt THIL_CHRVI : 377- 387: akkgl AtlcigGgqGV alave THIL_CLOAB : 273- 283: gvkpl AkivsyGsaGV dpaim THIL_CLOAB : 345- 355: nggai AlghpiGasGA rilvt THIL_CLODI : 14- 24: vvias AartavGsfGG afksv THIL_CLODI : 15- 24: viasa Artav-GsfGG afksv THIL_HAEIN : 346- 356: hggai AlghpiGasGA rilvt THIL_HUMAN : 410- 419: geygl Asicn-GggGA samli THIL_MYCLE : 346- 356: nggai AvghplGmsGA ritlh THIL_RAT : 407- 416: gefgl Asicn-GggGA savli THIL_SACUV : 351- 361: yggav AlghplGcsGA rvvvt THIL_SACUV : 381- 390: gkigv Aaicn-GggGA ssvvi THIL_THIVI : 10- 20: ivivd AgrtaiGtfGG alsal THIL_THIVI : 347- 357: nggai AighpiGasGA rvlvt THIL_THIVI : 377- 387: akkgl AtlcigGgqGV alave THIL_YEAST : 351- 361: yggav AlghplGcsGA rvvvt THIL_YEAST : 381- 390: gkigv Aaicn-GggGA ssivi THIL_ZOORA : 344- 354: nggai AighpiGasGA rilnt THIL_ZOORA : 374- 384: arkgl AtlcigGgmGV amcie THIM_CANTR : 350- 360: yggav AmghplGcsGA riivt THIM_CANTR : 379- 389: ggrfg AagvcnGggGA saivi THIM_CANTR : 380- 389: grfga Agvcn-GggGA saivi THIM_HUMAN : 12- 22: vfvva AkrtpfGayGG llkdf THIM_RAT : 12- 22: vfiva AkrtpfGayGG llkdf YKA3_CAEEL : 430- 439: qyavi Aacaa-GghGV gmlie I 9: 13.7494 41( 28) L-x(1,2)-A-x(0,1)-G-[AILV] Occurences: 41(28) NLTP_MOUSE : 357- 362: skghp Lg-AtGL aqcae NLTP_RAT : 357- 362: skghp Lg-AtGL aqcae THI1_RAT : 329- 334: aipaa LqkA-GL tvndi THI2_RAT : 339- 344: aipaa LqkA-GL tvndi THIK_CANTR : 81- 87: aignv LnqAaGA tehrg THIK_CANTR : 95- 99: hrgac La-A-GI pytaa THIK_ECOLI : 292- 297: askla LkkA-GL sasdi THIK_HUMAN : 329- 334: aipva LqkA-GL tvsdv THIK_PSEFR : 295- 300: atqka LkrA-GL nmadi THIK_YARLI : 84- 88: vcgnv La-A-GA gateh THIK_YARLI : 98- 102: hraac Lv-A-GI petvp THIK_YARLI : 372- 377: aighp Lg-AtGA rqfat THIK_YEAST : 327- 332: aipkv Le-AtGL qvqdi THIL_ALCEU : 38- 43: vikaa LerA-GV kpeqv THIL_BACSU : 38- 43: vmkea LqqA-GV sgddv THIL_CANTR : 81- 87: aignv LnqAaGA tehrg THIL_CANTR : 95- 99: hrgac La-A-GI pytaa THIL_CHRVI : 58- 62: ilgqv Lt-A-GV gqnpa THIL_CHRVI : 72- 76: arqtt Lh-A-GL phsvp THIL_CLOAB : 57- 61: ilgnv Lq-A-GL gqnpa THIL_CLODI : 62- 66: llggv Lt-A-GL gqnia THIL_CLODI : 76- 80: arqia Lg-A-GI pvekp THIL_HAEIN : 57- 61: imgnv Lq-A-GL gqnpa THIL_HAEIN : 71- 75: arqaa Lk-A-GI ekeip THIL_HAEIN : 301- 306: atqka LkkA-GI nlddi THIL_HUMAN : 109- 113: trqav Lg-A-GL pistp THIL_MYCLE : 57- 61: iigqv Lt-A-GA gqmpa THIL_RAT : 106- 110: trqat Lg-A-GL piatp THIL_RAT : 334- 339: avpkv LkyA-GL kkedi THIL_SACUV : 74- 78: arqva Lt-A-GL gnhiv THIL_SACUV : 305- 310: avpka LkhA-GI edins THIL_THIVI : 72- 76: arqtt Lm-A-GL phtvp THIL_YEAST : 74- 78: arqva La-A-GL snhiv THIL_YEAST : 305- 310: avpka LkhA-GI edins THIL_ZOORA : 38- 43: visav LerA-GV aagev THIM_CANTR : 74- 78: arqva Lk-A-GL pdsii THIM_HUMAN : 304- 309: aisga LkkA-GL slkdm THIM_RAT : 148- 152: kledt Lw-A-GL tdqhv THIM_RAT : 304- 309: aitga LkkA-GL slkdm YKA3_CAEEL : 93- 97: areaa Ll-A-GV pdkip YKA3_CAEEL : 337- 342: vipkl LdkA-GL tlkdv J 10: 13.6387 32( 28) A-x(3,4)-S-x(4)-G-x-[ADGPST] Occurences: 32(28) NLTP_MOUSE : 75- 86: tsgqr Aiyh-SlgltGiP iinvn NLTP_RAT : 75- 86: tcgqr Aiyh-SlgltGiP iinvn THI1_RAT : 272- 283: ggstt Agns-SqvsdGaA avlla THI2_RAT : 282- 293: ggstt Agns-SqvsdGaA avlla THIK_CANTR : 261- 272: dgttt Agna-SqvsdGaA avllm THIK_ECOLI : 235- 246: ngmvt Agts-SalsdGaA amlvm THIK_ECOLI : 265- 276: glkpr Arvr-SmavvGcD psimg THIK_HUMAN : 272- 283: dgstt Agns-SqvsdGaA ailla THIK_PSEFR : 238- 249: ggtvt Agts-SqitdGaS cmivm THIK_PSEFR : 268- 279: glepl Avir-SmavaGvD paimg THIK_YARLI : 265- 276: egtth Agna-SqisdGaG avllm THIK_YEAST : 270- 281: rgttt Agna-SqvsdGvA gvlla THIL_ALCEU : 244- 255: agtvt Aana-SglndGaA avvvm THIL_ALCEU : 274- 285: gltpl Atik-SyanaGvD pkvmg THIL_BACSU : 376- 387: gglgv Aaic-SgaaqGdA vlvqv THIL_CANTR : 261- 272: dgttt Agna-SqvsdGaA avllm THIL_CHRVI : 245- 256: dgsvt Agna-SgindGaA mvvvm THIL_CLOAB : 273- 284: gvkpl Akiv-SygsaGvD paimg THIL_CLODI : 25- 37: gsfgg AfksvSavelGvT aakea THIL_HAEIN : 244- 255: egtvt Agna-SgindGaA alilv THIL_HAEIN : 274- 285: glkai Akir-SyasgGvD psvmg THIL_HUMAN : 280- 291: ngtvt Aana-StlndGaA alvlm THIL_MYCLE : 322- 334: neafa AvalaSarelGiA pelvn THIL_RAT : 277- 288: ngtvt Aana-StlndGaA avvlm THIL_SACUV : 248- 259: ngtvt Aana-SpindGaA aiilv THIL_THIVI : 245- 256: qgtvt Agna-SgindGaA mvvvm THIL_YEAST : 248- 259: ngtvt Aana-SpindGaA avilv THIL_ZOORA : 242- 253: egtvt Agna-SglndGaA aallm THIM_CANTR : 248- 259: ngtvt Apna-SklndGgA alvlv THIM_HUMAN : 247- 258: dgtvt Agna-SgvadGaG aviia THIM_RAT : 247- 258: egtvt Agna-SgmsdGaG vviia YKA3_CAEEL : 279- 290: hgtvt Aana-SyltdGaS aalim K 11: 13.3931 47( 28) A-x(0,1)-G-x(1,2)-P-x-[AEGST] Occurences: 47(28) NLTP_MOUSE : 318- 325: litye AlGlcPeG qggtl NLTP_RAT : 318- 325: lltye AlGlcPeG qggal THI1_RAT : 28- 33: aapcs A-Gf-PqA sasdv THI1_RAT : 374- 380: lggai AlGh-PlG ctgar THI2_RAT : 22- 27: vlghl A-Gr-PeS ssalq THI2_RAT : 384- 390: lggai AlGh-PlG ctgar THIK_CANTR : 96- 102: rgacl AaGi-PyT aafia THIK_CANTR : 97- 102: gacla A-Gi-PyT aafia THIK_CANTR : 299- 304: vlcst A-Gv-PpE imgvg THIK_CANTR : 363- 369: nggai AlGh-PlG etgar THIK_ECOLI : 340- 346: nggai AlGh-PlG csgar THIK_HUMAN : 374- 380: lggav AlGh-PlG ctgar THIK_PSEFR : 343- 349: hggai AlGh-PfG csgar THIK_YARLI : 100- 105: aaclv A-Gi-PeT vpfva THIK_YARLI : 367- 373: rggai AiGh-PlG atgar THIK_YEAST : 109- 115: raacl AsGi-PyS tpfva THIK_YEAST : 372- 378: rggai AlGh-PlG ctgar THIL_ALCEU : 346- 352: nggai AiGh-PiG asgcr THIL_BACSU : 73- 78: laarl A-Gm-PwS vpset THIL_BACSU : 346- 352: nggai AlGh-PiG asgar THIL_CANTR : 96- 102: rgacl AaGi-PyT aafia THIL_CANTR : 97- 102: gacla A-Gi-PyT aafia THIL_CANTR : 299- 304: vlcst A-Gv-PpE imgvg THIL_CANTR : 363- 369: nggai AlGh-PlG etgar THIL_CHRVI : 74- 79: qttlh A-Gl-PhS vpamt THIL_CHRVI : 347- 353: nggai AiGh-PiG asgar THIL_CLOAB : 73- 78: qasfk A-Gl-PvE ipamt THIL_CLOAB : 345- 351: nggai AlGh-PiG asgar THIL_CLODI : 78- 83: qialg A-Gi-PvE kpamt THIL_HAEIN : 346- 352: hggai AlGh-PiG asgar THIL_HUMAN : 79- 84: gaiek A-Gi-PkE evkea THIL_HUMAN : 111- 116: qavlg A-Gl-PiS tpctt THIL_MYCLE : 346- 352: nggai AvGh-PlG msgar THIL_RAT : 76- 81: gaiek A-Gi-PkE evkev THIL_RAT : 108- 113: qatlg A-Gl-PiA tpctt THIL_SACUV : 351- 357: yggav AlGh-PlG csgar THIL_THIVI : 74- 79: qttlm A-Gl-PhT vpamt THIL_THIVI : 347- 353: nggai AiGh-PiG asgar THIL_YEAST : 351- 357: yggav AlGh-PlG csgar THIL_ZOORA : 73- 78: qaamk A-Gv-PqE atawg THIL_ZOORA : 344- 350: nggai AiGh-PiG asgar THIM_CANTR : 76- 81: qvalk A-Gl-PdS iiast THIM_CANTR : 350- 356: yggav AmGh-PlG csgar THIM_HUMAN : 349- 355: nggai AlGh-PlG gsgsr THIM_RAT : 43- 49: raals A-GkvPpE tidsv THIM_RAT : 349- 355: sggai AlGh-PlG gsgsr YKA3_CAEEL : 302- 309: eeyal AnGykPkA ylrdy L 12: 12.0102 34( 28) G-x(1,2)-G-x-R Occurences: 34(28) NLTP_MOUSE : 374- 379: cwqlr GeaGkR qvpga NLTP_RAT : 374- 379: cwqlr GeaGkR qvpga THI1_RAT : 380- 385: lghpl GctGaR qvvtl THI2_RAT : 390- 395: lghpl GctGaR qvvtl THIK_CANTR : 369- 374: lghpl GetGaR qyati THIK_ECOLI : 346- 351: lghpl GcsGaR isttl THIK_HUMAN : 380- 385: lghpl GctGaR qvitl THIK_PSEFR : 349- 354: lghpf GcsGaR isgtl THIK_YARLI : 373- 378: ighpl GatGaR qfatl THIK_YEAST : 378- 383: lghpl GctGaR qvati THIL_ALCEU : 352- 357: ighpi GasGcR ilvtl THIL_BACSU : 128- 133: yavpa GrwGaR mgdge THIL_BACSU : 352- 357: lghpi GasGaR ilmtl THIL_CANTR : 369- 374: lghpl GetGaR qyati THIL_CHRVI : 353- 358: ighpi GasGaR vlvtl THIL_CLOAB : 89- 93: inkvc Gs-GlR tvsla THIL_CLOAB : 351- 356: lghpi GasGaR ilvtl THIL_CLODI : 94- 98: inivc Gs-GlR swral THIL_HAEIN : 352- 357: lghpi GasGaR ilvtl THIL_HUMAN : 388- 393: lghpi GmsGaR ivghl THIL_MYCLE : 352- 357: vghpl GmsGaR itlhv THIL_RAT : 385- 390: lghpi GmsGaR ivvhl THIL_SACUV : 357- 362: lghpl GcsGaR vvvtl THIL_THIVI : 353- 358: ighpi GasGaR vlvtl THIL_YEAST : 357- 362: lghpl GcsGaR vvvtl THIL_ZOORA : 89- 93: mnqlc Gs-GlR avalg THIL_ZOORA : 350- 355: ighpi GasGaR ilntl THIM_CANTR : 356- 361: mghpl GcsGaR iivtl THIM_HUMAN : 355- 360: lghpl GgsGsR itahl THIM_HUMAN : 356- 360: ghplg Gs-GsR itahl THIM_RAT : 355- 360: lghpl GgsGsR itahl THIM_RAT : 356- 360: ghplg Gs-GsR itahl YKA3_CAEEL : 196- 201: tgetm GhsGdR laaaf YKA3_CAEEL : 405- 410: ighpf GatGvR laths M 13: 12.0102 55( 28) A-x(2)-A-x(0,1)-G Occurences: 55(28) NLTP_MOUSE : 39- 43: dypdm AkeA-G qkale NLTP_RAT : 39- 43: dypdl AkeA-G qkala THI1_RAT : 131- 135: glqav AniA-G girng THI1_RAT : 131- 136: glqav AniAgG irngs THI2_RAT : 141- 145: glqav AniA-G girng THI2_RAT : 141- 146: glqav AniAgG irngs THIK_CANTR : 93- 98: tehrg AclAaG ipyta THIK_CANTR : 204- 208: nkaak AvaA-G afkse THIK_ECOLI : 141- 145: lsrnv AkaA-G mmglt THIK_HUMAN : 131- 135: glqav AsiA-G girng THIK_HUMAN : 131- 136: glqav AsiAgG irngs THIK_PSEFR : 143- 148: hmsly AakAsG mmglt THIK_YARLI : 85- 89: cgnvl AagA-G atehr THIK_YARLI : 205- 210: yekaa AaqAaG kfdqe THIK_YARLI : 206- 210: ekaaa AqaA-G kfdqe THIK_YARLI : 256- 261: gklkp AfsAeG tthag THIK_YEAST : 106- 111: tehra AclAsG ipyst THIL_ALCEU : 10- 15: vivsa ArtAvG kfggs THIL_ALCEU : 70- 74: parqa AikA-G lpamv THIL_ALCEU : 101- 105: mlaan AimA-G daeiv THIL_ALCEU : 189- 193: nkaea AqkA-G kfdee THIL_ALCEU : 244- 249: agtvt AanAsG lndga THIL_BACSU : 70- 74: psrla ArlA-G mpwsv THIL_BACSU : 124- 128: snipy AvpA-G rwgar THIL_BACSU : 244- 249: dgsit AgnApG vndga THIL_CANTR : 93- 98: tehrg AclAaG ipyta THIL_CHRVI : 190- 194: qktea AqkA-G rfqde THIL_CHRVI : 245- 250: dgsvt AgnAsG indga THIL_CLOAB : 243- 248: dgtvt AgnAsG lndca THIL_CLODI : 15- 20: viasa ArtAvG sfgga THIL_CLODI : 75- 79: iarqi AlgA-G ipvek THIL_HAEIN : 70- 74: parqa AlkA-G iekei THIL_HAEIN : 244- 249: egtvt AgnAsG indga THIL_HUMAN : 225- 229: trska AweA-G kfgne THIL_MYCLE : 69- 74: mparq AavAaG igwdv THIL_MYCLE : 70- 74: parqa AvaA-G igwdv THIL_RAT : 222- 226: trske AwdA-G kfane THIL_SACUV : 73- 77: parqv AltA-G lgnhi THIL_THIVI : 245- 250: qgtvt AgnAsG indga THIL_YEAST : 73- 77: parqv AlaA-G lsnhi THIL_YEAST : 130- 134: pyymp AarA-G akfgq THIL_ZOORA : 10- 15: ivias ArtAvG sfnga THIL_ZOORA : 41- 46: avler AgvAaG evnev THIL_ZOORA : 70- 74: parqa AmkA-G vpqea THIL_ZOORA : 125- 129: maphc AhlA-G gvkmg THIL_ZOORA : 125- 130: maphc AhlAgG vkmgd THIL_ZOORA : 242- 247: egtvt AgnAsG lndga THIM_CANTR : 73- 77: parqv AlkA-G lpdsi THIM_HUMAN : 40- 44: faaka AlsA-G kvspe THIM_HUMAN : 193- 197: qrwka AndA-G yfnde THIM_HUMAN : 247- 252: dgtvt AgnAsG vadga THIM_HUMAN : 254- 258: nasgv AdgA-G aviia THIM_RAT : 40- 44: faara AlsA-G kvppe THIM_RAT : 193- 197: qrwka AneA-G yfnee THIM_RAT : 247- 252: egtvt AgnAsG msdga YKA3_CAEEL : 92- 96: iarea AllA-G vpdki YKA3_CAEEL : 131- 135: tgnan AiiA-G gvell YKA3_CAEEL : 131- 136: tgnan AiiAgG vells YKA3_CAEEL : 430- 435: qyavi AacAaG ghgvg YKA3_CAEEL : 431- 435: yavia AcaA-G ghgvg YKA3_CAEEL : 431- 436: yavia AcaAgG hgvgm N 14: 12.0102 48( 28) A-x-Q-x(1,2)-A Occurences: 48(28) NLTP_MOUSE : 42- 46: dmake AgQk-A ledaq NLTP_RAT : 42- 46: dlake AgQk-A ladrq THI1_RAT : 20- 24: sesss AlQa-A pcsag THI1_RAT : 205- 210: dafal AsQqkA asaqs THI1_RAT : 328- 332: yaipa AlQk-A gltvn THI2_RAT : 30- 34: pesss AlQa-A pcsat THI2_RAT : 215- 220: dafal AsQqkA asaqs THI2_RAT : 338- 342: yaipa AlQk-A gltvn THIK_CANTR : 373- 377: lgetg ArQy-A tiipl THIK_ECOLI : 179- 183: arawa AtQs-A afkne THIK_ECOLI : 179- 184: arawa AtQsaA fknei THIK_HUMAN : 30- 35: pclsg ApQasA advvv THIK_HUMAN : 205- 210: dtfal AsQqkA araqs THIK_HUMAN : 328- 332: yaipv AlQk-A gltvs THIK_HUMAN : 349- 353: ineaf AsQa-A ycvek THIK_PSEFR : 290- 294: ygpvp AtQk-A lkrag THIK_YARLI : 205- 209: yekaa AaQa-A gkfdq THIK_YARLI : 377- 381: lgatg ArQf-A tllse THIK_YEAST : 382- 386: lgctg ArQv-A tilre THIL_ALCEU : 66- 70: sgqnp ArQa-A ikagl THIL_ALCEU : 188- 192: qnkae AaQk-A gkfde THIL_ALCEU : 321- 326: ineaf AaQalA vhqqm THIL_BACSU : 37- 41: ivmke AlQq-A gvsgd THIL_BACSU : 382- 387: aicsg AaQgdA vlvqv THIL_CANTR : 373- 377: lgetg ArQy-A tiipl THIL_CHRVI : 99- 104: kavhl AmQaiA cgdad THIL_CHRVI : 189- 193: qqkte AaQk-A grfqd THIL_CLOAB : 181- 186: defal AsQkkA eeaik THIL_CLOAB : 320- 325: sneaf AaQslA vakdl THIL_CLODI : 71- 75: lgqni ArQi-A lgagi THIL_HAEIN : 66- 70: lgqnp ArQa-A lkagi THIL_HAEIN : 296- 300: lgpvp AtQk-A lkkag THIL_HUMAN : 71- 75: klgsi AiQg-A iekag THIL_MYCLE : 61- 66: vltag AgQmpA rqaav THIL_MYCLE : 66- 70: agqmp ArQa-A vaagi THIL_RAT : 57- 61: flgsl AsQp-A tklgt THIL_RAT : 68- 72: klgti AiQg-A iekag THIL_SACUV : 69- 73: lgqap ArQv-A ltagl THIL_THIVI : 99- 104: kavhl AmQavA cgdae THIL_THIVI : 182- 187: dafaa AsQqkA eaaiq THIL_YEAST : 69- 73: lgqap ArQv-A laagl THIL_YEAST : 287- 291: gwgea AhQp-A dftwa THIL_ZOORA : 66- 70: egqnp ArQa-A mkagv THIL_ZOORA : 180- 185: dafav AsQnkA eaaqk THIL_ZOORA : 319- 324: aneaf AaQacA vnkdl THIM_CANTR : 69- 73: vgqap ArQv-A lkagl THIM_HUMAN : 324- 329: vneaf ApQylA versl THIM_RAT : 324- 329: vneaf ApQflA vqksl YKA3_CAEEL : 357- 362: iheaf AgQvlA nlnam O 15: 12.0102 79( 28) G-x(2,3)-A-x(3)-A Occurences: 79(28) NLTP_MOUSE : 43- 50: makea Gqk-AledA qipys NLTP_MOUSE : 97- 104: nncst Gst-AlfmA hqliq NLTP_RAT : 97- 104: nncst Gst-AlfmA qqlvq NLTP_RAT : 152- 159: linky Gms-AcpfA pqlfg THI1_RAT : 281- 288: sqvsd Gaa-AvllA rrska THI1_RAT : 320- 328: dimgi GpayAipaA lqkag THI2_RAT : 291- 298: sqvsd Gaa-AvllA rrska THI2_RAT : 330- 338: dimgi GpayAipaA lqkag THIK_CANTR : 369- 377: lghpl GetgArqyA tiipl THIK_ECOLI : 65- 73: qtleq GfniArnaA llaev THIK_ECOLI : 148- 155: aagmm Glt-AemlA rmhgi THIK_ECOLI : 283- 291: simgy GpvpAsklA lkkag THIK_HUMAN : 43- 51: vvvvh GrrtAicrA grggf THIK_HUMAN : 281- 288: sqvsd Gaa-AillA rrska THIK_HUMAN : 320- 328: dimgi GpayAipvA lqkag THIK_PSEFR : 286- 294: aimgy GpvpAtqkA lkrag THIK_YARLI : 373- 381: ighpl GatgArqfA tllse THIK_YEAST : 378- 386: lghpl GctgArqvA tilre THIL_ALCEU : 18- 26: avgkf GgslAkipA pelga THIL_ALCEU : 19- 26: vgkfg Gsl-AkipA pelga THIL_ALCEU : 62- 70: ltags GqnpArqaA ikagl THIL_ALCEU : 74- 81: aaika Glp-AmvpA mtink THIL_ALCEU : 91- 98: kvcgs Glk-AvmlA anaim THIL_ALCEU : 158- 165: nqyhm Git-AenvA keygi THIL_ALCEU : 231- 239: ldsms GlkpAfdkA gtvta THIL_ALCEU : 292- 300: kvmgm GpvpAskrA lsrae THIL_BACSU : 161- 169: hmavh GntaAkeyA isrre THIL_BACSU : 283- 290: gfstt Gmp-AhelA aapgf THIL_CANTR : 369- 377: lghpl GetgArqyA tiipl THIL_CHRVI : 92- 99: kvcgs Glk-AvhlA mqaia THIL_CHRVI : 159- 166: nnyhm Gtt-AeniA qkygf THIL_CLOAB : 30- 37: pavdl Gat-AikeA vkkag THIL_CLOAB : 158- 165: ndyhm Git-AeniA erwni THIL_CLOAB : 291- 299: aimgy GpfyAtkaA iekag THIL_CLODI : 35- 42: savel Gvt-AakeA ikran THIL_CLODI : 67- 75: ltagl GqniArqiA lgagi THIL_HAEIN : 62- 70: lqagl GqnpArqaA lkagi THIL_HAEIN : 159- 166: nhyhm Git-AeniA eqygi THIL_HAEIN : 292- 300: svmgl GpvpAtqkA lkkag THIL_HUMAN : 68- 75: patkl Gsi-AiqgA iekag THIL_HUMAN : 129- 136: kvcas Gmk-AimmA sqslm THIL_HUMAN : 194- 201: nkihm Gsc-AentA kklni THIL_MYCLE : 62- 70: ltaga GqmpArqaA vaagi THIL_MYCLE : 91- 98: kmcls Gld-AialA dqlir THIL_MYCLE : 219- 226: ftede Gir-AntsA eslag THIL_MYCLE : 374- 381: rgsgy Gva-AlcgA ggqgd THIL_RAT : 54- 61: igsfl Gsl-AsqpA tklgt THIL_RAT : 65- 72: patkl Gti-AiqgA iekag THIL_RAT : 126- 133: kvcas Gmk-AimmA sqslm THIL_RAT : 191- 198: nkihm Gnc-AentA kklsi THIL_SACUV : 31- 38: tavel Gaa-AlkgA lakvp THIL_SACUV : 65- 73: lsanl GqapArqvA ltagl THIL_SACUV : 161- 168: dglam Gvh-AekcA rdwdi THIL_SACUV : 284- 291: ivkgw Gea-AhlpA dftwa THIL_THIVI : 92- 99: kvcgs Glk-AvhlA mqava THIL_THIVI : 159- 166: nqchm Gvt-AeniA kkyaf THIL_YEAST : 31- 38: tavel Gav-AlkgA lakvp THIL_YEAST : 65- 73: lsanl GqapArqvA laagl THIL_YEAST : 161- 168: dglam Gvh-AekcA rdwdi THIL_YEAST : 284- 291: iikgw Gea-AhqpA dftwa THIL_ZOORA : 19- 26: vgsfn Gaf-AntpA helga THIL_ZOORA : 62- 70: lpage GqnpArqaA mkagv THIL_ZOORA : 157- 164: ygyhm Gtt-AenvA kqwql THIL_ZOORA : 290- 298: kvmgt GpipAsrkA lerag THIM_CANTR : 32- 39: tysdl Gah-AvkaA lakvp THIM_CANTR : 65- 73: lqanv GqapArqvA lkagl THIM_CANTR : 161- 168: eeklm Gva-AekcA kdhgf THIM_HUMAN : 256- 263: sgvad Gag-AviiA sedav THIM_HUMAN : 295- 303: simgi GpvpAisgA lkkag THIM_HUMAN : 373- 381: elrrr GgkyAvgsA ciggg THIM_HUMAN : 374- 381: lrrrg Gky-AvgsA ciggg THIM_RAT : 162- 169: vklpm Gmt-AenlA akyni THIM_RAT : 295- 303: aimgi GpvpAitgA lkkag THIM_RAT : 373- 381: elrrr GgkyAvgsA ciggg THIM_RAT : 374- 381: lrrrg Gky-AvgsA ciggg YKA3_CAEEL : 122- 129: mttgm Gml-AtgnA naiia YKA3_CAEEL : 358- 366: heafa GqvlAnlnA mdsdy YKA3_CAEEL : 408- 416: pfgat GvrlAthsA hrlke YKA3_CAEEL : 424- 431: lkeek Gqy-AviaA caagg P 16: 12.0102 75( 28) G-x-G-x(2,3)-A Occurences: 75(28) NLTP_MOUSE : 428- 433: ptssa GdGfk-A nlvfk NLTP_MOUSE : 466- 472: fkvkd GpGgkeA twvvd NLTP_RAT : 393- 398: lqhnl GlGga-A vvtly NLTP_RAT : 428- 433: ptssa GdGfk-A nlifk NLTP_RAT : 466- 472: fkvkd GpGgkeA twvvd THI1_RAT : 95- 101: nvlqp GaGaamA riaqf THI1_RAT : 318- 324: ppdim GiGpayA ipaal THI1_RAT : 410- 415: vsmci GtGmg-A aavfe THI1_RAT : 410- 416: vsmci GtGmgaA avfey THI1_RAT : 412- 417: mcigt GmGaa-A vfeyp THI2_RAT : 105- 111: nvlep GaGavmA riaqf THI2_RAT : 328- 334: ppdim GiGpayA ipaal THI2_RAT : 420- 425: vsmci GtGmg-A aavfe THI2_RAT : 420- 426: vsmci GtGmgaA avfey THI2_RAT : 422- 427: mcigt GmGaa-A vfeyp THIK_CANTR : 307- 313: ppeim GvGpayA ipevl THIK_CANTR : 396- 402: tsmci GsGmgsA silvr THIK_ECOLI : 281- 287: dpsim GyGpvpA sklal THIK_ECOLI : 375- 381: atmci GlGqgiA tvfer THIK_HUMAN : 95- 101: nvlqp GaGaimA riaqf THIK_HUMAN : 318- 324: ppdim GiGpayA ipval THIK_HUMAN : 410- 415: vsmci GtGmg-A aavfe THIK_HUMAN : 410- 416: vsmci GtGmgaA avfey THIK_HUMAN : 412- 417: mcigt GmGaa-A vfeyp THIK_PSEFR : 284- 290: dpaim GyGpvpA tqkal THIK_PSEFR : 378- 384: stmci GlGqgiA tvfer THIK_YARLI : 311- 317: ppelm GiGpayA ipavl THIK_YARLI : 402- 407: tsmci GtGmg-A aslvv THIK_YARLI : 402- 408: tsmci GtGmgaA slvva THIK_YEAST : 47- 53: nrsai GkGfkgA fkdvn THIK_YEAST : 316- 322: ppeim GvGpayA ipkvl THIK_YEAST : 405- 410: vsmci GtGmg-A aaifi THIK_YEAST : 405- 411: vsmci GtGmgaA aifik THIK_YEAST : 407- 412: mcigt GmGaa-A ifike THIL_ALCEU : 60- 66: qvlta GsGqnpA rqaai THIL_ALCEU : 89- 94: inkvc GsGlk-A vmlaa THIL_ALCEU : 290- 296: dpkvm GmGpvpA skral THIL_ALCEU : 381- 387: aslci GgGmgvA laver THIL_ALCEU : 383- 389: lcigg GmGvalA verk THIL_BACSU : 370- 376: elkrr GgGlgvA aicsg THIL_BACSU : 372- 377: krrgg GlGva-A icsga THIL_CANTR : 307- 313: ppeim GvGpafA ipevl THIL_CANTR : 396- 402: tsmci GsGmgsA silvr THIL_CHRVI : 61- 67: qvlta GvGqnpA rqttl THIL_CHRVI : 90- 95: inkvc GsGlk-A vhlam THIL_CHRVI : 291- 297: dpaim GtGpipA stkcl THIL_CHRVI : 382- 388: atlci GgGqgvA laver THIL_CHRVI : 384- 390: lcigg GqGvalA verm THIL_CLOAB : 60- 66: nvlqa GlGqnpA rqasf THIL_CLOAB : 289- 295: dpaim GyGpfyA tkaai THIL_CLOAB : 380- 386: atlci GgGqgtA illek THIL_CLODI : 65- 71: gvlta GlGqniA rqial THIL_HAEIN : 60- 66: nvlqa GlGqnpA rqaal THIL_HAEIN : 290- 296: dpsvm GlGpvpA tqkal THIL_HUMAN : 415- 421: asicn GgGgasA mliqk THIL_HUMAN : 416- 421: sicng GgGas-A mliqk THIL_MYCLE : 60- 66: qvlta GaGqmpA rqaav THIL_MYCLE : 370- 376: elarr GsGygvA alcga THIL_MYCLE : 372- 377: arrgs GyGva-A lcgag THIL_RAT : 107- 113: rqatl GaGlpiA tpctt THIL_RAT : 412- 418: asicn GgGgasA vliek THIL_RAT : 413- 418: sicng GgGas-A vliek THIL_SACUV : 282- 287: laivk GwGea-A hlpad THIL_THIVI : 61- 67: qvlta GcGqnpA rqttl THIL_THIVI : 90- 95: inkvc GsGlk-A vhlam THIL_THIVI : 291- 297: dpaim GtGpipA stdcl THIL_THIVI : 382- 388: atlci GgGqgvA laver THIL_THIVI : 384- 390: lcigg GqGvalA verl THIL_YEAST : 282- 287: laiik GwGea-A hqpad THIL_ZOORA : 60- 66: qvlpa GeGqnpA rqaam THIL_ZOORA : 89- 94: mnqlc GsGlr-A valgm THIL_ZOORA : 288- 294: dpkvm GtGpipA srkal THIL_ZOORA : 379- 385: atlci GgGmgvA mcies THIM_CANTR : 282- 287: lakis GwGea-A rtpfd THIM_CANTR : 385- 391: agvcn GgGgasA iviek THIM_CANTR : 386- 391: gvcng GgGas-A iviek THIM_HUMAN : 293- 299: dpsim GiGpvpA isgal THIM_HUMAN : 384- 390: gsaci GgGqgiA viiqs THIM_RAT : 293- 299: dpaim GiGpvpA itgal YKA3_CAEEL : 120- 125: vamtt GmGml-A tgnan Q 17: 12.0102 38( 28) G-x(3)-A-x(0,1)-L Occurences: 38(28) NLTP_MOUSE : 230- 236: cptsd GacaAiL sseef NLTP_MOUSE : 383- 388: krqvp GakvA-L qhnlg NLTP_RAT : 325- 330: glcpe GqggA-L vdrgd NLTP_RAT : 383- 388: krqvp GakvA-L qhnlg THI1_RAT : 370- 375: kvnpl GgaiA-L ghplg THI2_RAT : 380- 385: kvnpl GgaiA-L ghplg THIK_CANTR : 359- 364: klnin GgaiA-L ghplg THIK_ECOLI : 108- 114: rmimt GdaqAcL vggve THIK_ECOLI : 236- 241: gmvta GtssA-L sdgaa THIK_ECOLI : 336- 341: kinln GgaiA-L ghplg THIK_HUMAN : 370- 375: kvnpl GgavA-L ghplg THIK_PSEFR : 339- 344: kvnlh GgaiA-L ghpfg THIK_YARLI : 404- 410: mcigt GmgaAsL vvae THIK_YEAST : 368- 373: kvnpr GgaiA-L ghplg THIL_ALCEU : 383- 388: lcigg GmgvA-L averk THIL_BACSU : 342- 347: kvnvn GgaiA-L ghpig THIL_CANTR : 359- 364: klnin GgaiA-L ghplg THIL_CHRVI : 306- 312: cleka GwtpAdL dliea THIL_CHRVI : 384- 389: lcigg GqgvA-L averm THIL_CLOAB : 341- 346: kvnvn GgaiA-L ghpig THIL_CLOAB : 382- 388: lcigg GqgtAiL lekc THIL_CLODI : 60- 66: esllg GvltAgL gqnia THIL_HAEIN : 342- 347: ktnih GgaiA-L ghpig THIL_HUMAN : 417- 423: icngg GgasAmL iqkl THIL_MYCLE : 372- 378: arrgs GygvAaL cgagg THIL_MYCLE : 383- 388: lcgag GqgdA-L ilrav THIL_RAT : 414- 420: icngg GgasAvL iekl THIL_SACUV : 347- 352: kvnvy GgavA-L ghplg THIL_THIVI : 20- 25: igtfg GalsA-L qatdi THIL_THIVI : 306- 312: clkka GwapAdL dlvea THIL_THIVI : 384- 389: lcigg GqgvA-L averl THIL_YEAST : 347- 352: kvnvy GgavA-L ghplg THIL_ZOORA : 251- 256: sglnd GaaaA-L lmsea THIL_ZOORA : 251- 257: sglnd GaaaAlL mseae THIM_CANTR : 328- 334: afsvv GlanAeL vkipl THIM_HUMAN : 345- 350: ktnvn GgaiA-L ghplg THIM_RAT : 345- 350: ktnvs GgaiA-L ghplg YKA3_CAEEL : 288- 293: syltd GasaA-L imtee YKA3_CAEEL : 358- 364: heafa GqvlAnL namds R 18: 12.0102 63( 28) G-x(2,3)-G-A Occurences: 63(28) NLTP_MOUSE : 354- 359: glisk GhplGA tglaq NLTP_MOUSE : 393- 397: lqhnl Glg-GA vvvtl NLTP_RAT : 325- 329: glcpe Gqg-GA lvdrg NLTP_RAT : 354- 359: glisk GhplGA tglaq NLTP_RAT : 393- 397: lqhnl Glg-GA avvtl THI1_RAT : 380- 384: lghpl Gct-GA rqvvt THI1_RAT : 410- 415: vsmci GtgmGA aavfe THI2_RAT : 390- 394: lghpl Gct-GA rqvvt THI2_RAT : 420- 425: vsmci GtgmGA aavfe THIK_CANTR : 134- 139: geiec GlagGA esmst THIK_CANTR : 369- 373: lghpl Get-GA rqyat THIK_ECOLI : 346- 350: lghpl Gcs-GA ristt THIK_HUMAN : 380- 384: lghpl Gct-GA rqvit THIK_HUMAN : 410- 415: vsmci GtgmGA aavfe THIK_PSEFR : 349- 353: lghpf Gcs-GA risgt THIK_YARLI : 369- 374: gaiai GhplGA tgarq THIK_YARLI : 373- 377: ighpl Gat-GA rqfat THIK_YARLI : 402- 407: tsmci GtgmGA aslvv THIK_YEAST : 49- 53: saigk Gfk-GA fkdvn THIK_YEAST : 378- 382: lghpl Gct-GA rqvat THIK_YEAST : 405- 410: vsmci GtgmGA aaifi THIL_ALCEU : 249- 254: aanas GlndGA aavvv THIL_ALCEU : 348- 353: gaiai GhpiGA sgcri THIL_BACSU : 128- 132: yavpa Grw-GA rmgdg THIL_BACSU : 249- 254: agnap GvndGA gafvl THIL_BACSU : 348- 353: gaial GhpiGA sgari THIL_BACSU : 352- 356: lghpi Gas-GA rilmt THIL_CANTR : 134- 139: geiec GlagGA esmst THIL_CANTR : 369- 373: lghpl Get-GA rqyat THIL_CHRVI : 250- 255: agnas GindGA amvvv THIL_CHRVI : 349- 354: gaiai GhpiGA sgarv THIL_CHRVI : 353- 357: ighpi Gas-GA rvlvt THIL_CLOAB : 347- 352: gaial GhpiGA sgari THIL_CLOAB : 351- 355: lghpi Gas-GA rilvt THIL_CLODI : 20- 25: artav GsfgGA fksvs THIL_HAEIN : 15- 20: vrtpi GsfnGA lssvs THIL_HAEIN : 249- 254: agnas GindGA aalil THIL_HAEIN : 348- 353: gaial GhpiGA sgari THIL_HAEIN : 352- 356: lghpi Gas-GA rilvt THIL_HUMAN : 388- 392: lghpi Gms-GA rivgh THIL_HUMAN : 415- 419: asicn Ggg-GA samli THIL_MYCLE : 352- 356: vghpl Gms-GA ritlh THIL_RAT : 385- 389: lghpi Gms-GA rivvh THIL_RAT : 412- 416: asicn Ggg-GA savli THIL_SACUV : 357- 361: lghpl Gcs-GA rvvvt THIL_SACUV : 386- 390: aaicn Ggg-GA ssvvi THIL_THIVI : 16- 21: grtai GtfgGA lsalq THIL_THIVI : 250- 255: agnas GindGA amvvv THIL_THIVI : 349- 354: gaiai GhpiGA sgarv THIL_THIVI : 353- 357: ighpi Gas-GA rvlvt THIL_YEAST : 357- 361: lghpl Gcs-GA rvvvt THIL_YEAST : 386- 390: aaicn Ggg-GA ssivi THIL_ZOORA : 15- 20: artav GsfnGA fantp THIL_ZOORA : 247- 252: agnas GlndGA aaall THIL_ZOORA : 346- 351: gaiai GhpiGA sgari THIL_ZOORA : 350- 354: ighpi Gas-GA rilnt THIM_CANTR : 356- 360: mghpl Gcs-GA riivt THIM_CANTR : 374- 379: vltqe GgrfGA agvcn THIM_CANTR : 375- 379: ltqeg Grf-GA agvcn THIM_CANTR : 385- 389: agvcn Ggg-GA saivi THIM_HUMAN : 252- 257: agnas GvadGA gavii THIM_RAT : 252- 257: agnas GmsdGA gvvii YKA3_CAEEL : 401- 406: gslsi GhpfGA tgvrl S 19: 12.0102 57( 28) A-x(5)-G-x(2,3)-G Occurences: 57(28) NLTP_MOUSE : 75- 84: tsgqr AiyhslGlt-G ipiin NLTP_MOUSE : 387- 396: pgakv AlqhnlGlg-G avvvt NLTP_MOUSE : 460- 469: iggif AfkvkdGpg-G keatw NLTP_RAT : 75- 84: tcgqr AiyhslGlt-G ipiin NLTP_RAT : 387- 396: pgakv AlqhnlGlg-G aavvt NLTP_RAT : 460- 469: iggif AfkvkdGpg-G keatw THI1_RAT : 374- 383: lggai AlghplGct-G arqvv THI2_RAT : 384- 393: lggai AlghplGct-G arqvv THIK_CANTR : 363- 372: nggai AlghplGet-G arqya THIK_ECOLI : 9- 19: vvivd AirtpmGrskG gafrn THIK_ECOLI : 340- 349: nggai AlghplGcs-G arist THIK_HUMAN : 374- 383: lggav AlghplGct-G arqvi THIK_PSEFR : 343- 352: hggai AlghpfGcs-G arisg THIK_YARLI : 131- 141: ankir AgqidiGigcG vesms THIK_YARLI : 367- 376: rggai AighplGat-G arqfa THIK_YEAST : 273- 282: ttagn AsqvsdGva-G vllar THIK_YEAST : 372- 381: rggai AlghplGct-G arqva THIL_ALCEU : 9- 18: vvivs AartavGkf-G gslak THIL_ALCEU : 9- 19: vvivs AartavGkfgG slaki THIL_ALCEU : 121- 131: enmsa AphvlpGsrdG frmgd THIL_ALCEU : 346- 355: nggai AighpiGas-G crilv THIL_ALCEU : 376- 385: akkgl AslcigGgm-G valav THIL_BACSU : 9- 18: tvivs AartpfGkf-G gvlke THIL_BACSU : 9- 19: tvivs AartpfGkfgG vlkev THIL_BACSU : 346- 355: nggai AlghpiGas-G arilm THIL_CANTR : 363- 372: nggai AlghplGet-G arqya THIL_CHRVI : 10- 19: ivivd AgrsaiGtf-G gslss THIL_CHRVI : 10- 20: ivivd AgrsaiGtfgG slssl THIL_CHRVI : 347- 356: nggai AighpiGas-G arvlv THIL_CHRVI : 377- 386: akkgl AtlcigGgq-G valav THIL_CLOAB : 9- 18: vvias AvrtaiGsy-G kslkd THIL_CLOAB : 125- 135: rapyl AnnarwGyrmG nakfv THIL_CLOAB : 273- 282: gvkpl AkivsyGsa-G vdpai THIL_CLOAB : 345- 354: nggai AlghpiGas-G arilv THIL_CLOAB : 375- 384: akkgl AtlcigGgq-G taill THIL_CLODI : 14- 23: vvias AartavGsf-G gafks THIL_CLODI : 14- 24: vvias AartavGsfgG afksv THIL_HAEIN : 9- 19: vvivs AvrtpiGsfnG alssv THIL_HAEIN : 346- 355: hggai AlghpiGas-G arilv THIL_HAEIN : 376- 385: kklgl AtlcigGgq-G ismiv THIL_HUMAN : 47- 57: vvivs AtrtpiGsflG slsll THIL_MYCLE : 346- 355: nggai AvghplGms-G aritl THIL_MYCLE : 376- 385: sgygv AalcgaGgq-G dalil THIL_RAT : 44- 54: vvivs AtrtpiGsflG slasq THIL_RAT : 396- 405: ivvhl AhalkqGef-G lasic THIL_SACUV : 351- 360: yggav AlghplGcs-G arvvv THIL_THIVI : 10- 19: ivivd AgrtaiGtf-G galsa THIL_THIVI : 10- 20: ivivd AgrtaiGtfgG alsal THIL_THIVI : 347- 356: nggai AighpiGas-G arvlv THIL_THIVI : 377- 386: akkgl AtlcigGgq-G valav THIL_YEAST : 351- 360: yggav AlghplGcs-G arvvv THIL_ZOORA : 36- 46: atvis AvleraGvaaG evnev THIL_ZOORA : 344- 353: nggai AighpiGas-G ariln THIL_ZOORA : 374- 383: arkgl AtlcigGgm-G vamci THIM_CANTR : 203- 212: fksei ApvtikGfr-G kpdtv THIM_CANTR : 350- 359: yggav AmghplGcs-G ariiv THIM_CANTR : 379- 388: ggrfg AagvcnGgg-G asaiv THIM_HUMAN : 12- 21: vfvva AkrtpfGay-G gllkd THIM_HUMAN : 12- 22: vfvva AkrtpfGaygG llkdf THIM_HUMAN : 349- 358: nggai AlghplGgs-G srita THIM_RAT : 12- 21: vfiva AkrtpfGay-G gllkd THIM_RAT : 12- 22: vfiva AkrtpfGaygG llkdf THIM_RAT : 349- 358: sggai AlghplGgs-G srita YKA3_CAEEL : 430- 440: qyavi AacaagGhgvG mliea T 20: 11.5102 50( 28) N-x(2,3)-G-x(0,1)-G Occurences: 50(28) NLTP_MOUSE : 336- 340: vdrgd Nty-G-G kwvin NLTP_MOUSE : 345- 349: gkwvi Nps-G-G liskg NLTP_MOUSE : 391- 396: valqh NlglG-G avvvt NLTP_RAT : 336- 340: vdrgd Nty-G-G kwvin NLTP_RAT : 345- 349: gkwvi Nps-G-G liskg NLTP_RAT : 391- 396: valqh NlglG-G aavvt THI1_RAT : 132- 136: lqava Nia-G-G irngs THI1_RAT : 367- 371: paekv Npl-G-G aialg THI2_RAT : 142- 146: lqava Nia-G-G irngs THI2_RAT : 377- 381: paekv Npl-G-G aialg THIK_CANTR : 356- 360: peekl Nin-G-G aialg THIK_ECOLI : 333- 337: ideki Nln-G-G aialg THIK_HUMAN : 367- 371: ppekv Npl-G-G avalg THIK_PSEFR : 230- 234: lkpaf Npk-G-G tvtag THIK_PSEFR : 336- 340: mnekv Nlh-G-G aialg THIK_YARLI : 360- 364: deskv Npr-G-G aiaig THIK_YEAST : 365- 369: dlnkv Npr-G-G aialg THIL_ALCEU : 85- 91: pamti NkvcGsG lkavm THIL_ALCEU : 339- 343: dtskv Nvn-G-G aiaig THIL_BACSU : 339- 343: dlekv Nvn-G-G aialg THIL_CANTR : 356- 360: peekl Nin-G-G aialg THIL_CHRVI : 86- 92: pamti NkvcGsG lkavh THIL_CHRVI : 340- 344: dlskv Nvn-G-G aiaig THIL_CLOAB : 85- 91: pamti NkvcGsG lrtvs THIL_CLOAB : 338- 342: dmnkv Nvn-G-G aialg THIL_CLODI : 90- 96: pamti NivcGsG lrswr THIL_HAEIN : 85- 91: pslti NkvcGsG lksva THIL_HAEIN : 339- 343: dmnkt Nih-G-G aialg THIL_HUMAN : 93- 98: eaymg NvlqG-G egqap THIL_HUMAN : 375- 379: dpqkv Nin-G-G avslg THIL_HUMAN : 414- 418: lasic Ngg-G-G asaml THIL_MYCLE : 339- 343: apelv Nvn-G-G aiavg THIL_RAT : 90- 95: evymg NviqG-G egqap THIL_RAT : 372- 376: dpqkv Nvh-G-G avslg THIL_RAT : 411- 415: lasic Ngg-G-G asavl THIL_SACUV : 344- 348: dpskv Nvy-G-G avalg THIL_SACUV : 385- 389: vaaic Ngg-G-G assvv THIL_THIVI : 86- 92: pamti NkvcGsG lkavh THIL_THIVI : 340- 344: dlskv Nvn-G-G aiaig THIL_YEAST : 344- 348: dpskv Nvy-G-G avalg THIL_YEAST : 385- 389: vaaic Ngg-G-G assiv THIL_ZOORA : 85- 91: tawgm NqlcGsG lrava THIL_ZOORA : 337- 341: dpsiv Nvn-G-G aiaig THIM_CANTR : 343- 347: plekl Nvy-G-G avamg THIM_CANTR : 384- 388: aagvc Ngg-G-G asaiv THIM_HUMAN : 89- 95: palti NrlcGsG fqsiv THIM_HUMAN : 342- 346: diskt Nvn-G-G aialg THIM_RAT : 89- 95: galtl NrlcGsG fqsiv THIM_RAT : 342- 346: dpskt Nvs-G-G aialg YKA3_CAEEL : 392- 396: pmdkl Nlw-G-G slsig Number of patterns evaluated by Pratt:1906 Total running time: 5 seconds