------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 29 sequences from file THIOLASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 29 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename THIOLASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: NLTP_MOUSE 547 NLTP_RAT 547 THI1_RAT 424 THI2_RAT 434 THIK_CANTR 408 THIK_ECOLI 387 THIK_HUMAN 424 THIK_PSEFR 390 THIK_YARLI 414 THIK_YEAST 417 THIL_ALCEU 393 THIL_BACSU 393 THIL_CANTR 408 THIL_CHRVI 394 THIL_CLOAB 392 THIL_CLODI 112 THIL_HAEIN 393 THIL_HUMAN 427 THIL_MYCLE 393 THIL_PIG 26 THIL_RAT 424 THIL_SACUV 398 THIL_THIVI 394 THIL_YEAST 398 THIL_ZOORA 391 THIM_CANTR 403 THIM_HUMAN 397 THIM_RAT 397 YKA3_CAEEL 448 Pratt run started at Thu Feb 6 21:26:12 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 64( 29) A-x(0,1)-G-x(1,2)-P 2: 11.5102 42( 29) L-x(0,1)-G-x(2,3)-L 3: 11.5102 59( 29) L-x(1,2)-A-x(0,1)-G 4: 11.5102 64( 29) L-x(1,3)-A-G 5: 11.5102 49( 29) L-x(2,4)-G-L 6: 11.5102 74( 29) A-x(3)-A-x(0,2)-G 7: 11.5102 103( 29) A-x(3,4)-A-x(0,1)-G 8: 11.5102 112( 29) A-x(2,3)-A-x(0,1)-G 9: 11.0102 65( 29) A-x(0,1)-G-x(0,2)-L 10: 11.0102 91( 29) G-x(0,2)-A-x(0,1)-G 11: 11.0102 90( 29) A-x(0,2)-V-x(0,1)-L 12: 11.0102 111( 29) A-x(1,2)-L-x(0,2)-G 13: 11.0102 77( 29) A-x(0,1)-L-x(0,2)-G 14: 11.0102 109( 29) A-x(0,1)-L-x(0,2)-A 15: 11.0102 78( 29) A-x(1,2)-G-x(1,3)-G 16: 10.5102 77( 29) A-x(0,2)-S-x(0,2)-G 17: 10.5102 92( 29) V-x(1,3)-A-x(1,3)-G 18: 10.5102 61( 29) V-x(0,2)-L-x(1,3)-G 19: 10.5102 86( 29) V-x(2,4)-A-x(0,2)-G 20: 8.3401 87( 29) S-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 14.2313 37( 29) G-x(0,2)-A-x(0,1)-G-x-[AP] B 2: 13.7494 42( 29) L-x(1,2)-A-x(0,1)-G-[AILV] C 3: 13.6722 43( 29) V-x(2,4)-A-x(0,2)-G-x(3)-[ADEGNQST]-x(4)-[AGILP] D 4: 13.2646 60( 29) A-x(1,2)-L-x(0,2)-G-x(2)-[AILP] E 5: 12.8914 58( 29) A-x(1,2)-G-x(1,3)-G-x-[AGPST] F 6: 12.7486 52( 29) A-x(0,1)-G-x(1,2)-P-x-[ADEGNQST] G 7: 11.5102 42( 29) L-x(0,1)-G-x(2,3)-L H 8: 11.5102 64( 29) L-x(1,3)-A-G I 9: 11.5102 49( 29) L-x(2,4)-G-L J 10: 11.5102 74( 29) A-x(3)-A-x(0,2)-G K 11: 11.5102 103( 29) A-x(3,4)-A-x(0,1)-G L 12: 11.5102 112( 29) A-x(2,3)-A-x(0,1)-G M 13: 11.0102 65( 29) A-x(0,1)-G-x(0,2)-L N 14: 11.0102 90( 29) A-x(0,2)-V-x(0,1)-L O 15: 11.0102 77( 29) A-x(0,1)-L-x(0,2)-G P 16: 11.0102 109( 29) A-x(0,1)-L-x(0,2)-A Q 17: 10.5102 77( 29) A-x(0,2)-S-x(0,2)-G R 18: 10.5102 92( 29) V-x(1,3)-A-x(1,3)-G S 19: 10.5102 61( 29) V-x(0,2)-L-x(1,3)-G T 20: 8.3401 87( 29) S-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 14.2313 37( 29) G-x(0,2)-A-x(0,1)-G-x-[AP] Occurences: 37(29) NLTP_MOUSE : 358- 363: kghpl G--AtGlA qcael NLTP_RAT : 358- 363: kghpl G--AtGlA qcael THI1_RAT : 95- 99: nvlqp G--A-GaA maria THI1_RAT : 371- 378: vnplg GaiAlGhP lgctg THI2_RAT : 19- 25: lqvvl GhlA-GrP esssa THI2_RAT : 381- 388: vnplg GaiAlGhP lgctg THIK_CANTR : 134- 139: geiec Gl-A-GgA esmst THIK_CANTR : 360- 367: lning GaiAlGhP lgetg THIK_ECOLI : 337- 344: inlng GaiAlGhP lgcsg THIK_HUMAN : 371- 378: vnplg GavAlGhP lgctg THIK_PSEFR : 340- 347: vnlhg GaiAlGhP fgcsg THIK_YARLI : 364- 371: vnprg GaiAiGhP lgatg THIK_YEAST : 369- 376: vnprg GaiAlGhP lgctg THIL_ALCEU : 343- 350: vnvng GaiAiGhP igasg THIL_BACSU : 343- 350: vnvng GaiAlGhP igasg THIL_BACSU : 381- 387: aaics Ga-AqGdA vlvqv THIL_CANTR : 134- 139: geiec Gl-A-GgA esmst THIL_CANTR : 360- 367: lning GaiAlGhP lgetg THIL_CHRVI : 344- 351: vnvng GaiAiGhP igasg THIL_CLOAB : 342- 349: vnvng GaiAlGhP igasg THIL_CLODI : 77- 81: rqial G--A-GiP vekpa THIL_HAEIN : 343- 350: tnihg GaiAlGhP igasg THIL_HUMAN : 110- 114: rqavl G--A-GlP istpc THIL_MYCLE : 343- 350: vnvng GaiAvGhP lgmsg THIL_PIG : 5- 9: qavl G--A-GlP cnttt THIL_RAT : 107- 111: rqatl G--A-GlP iatpc THIL_SACUV : 348- 355: vnvyg GavAlGhP lgcsg THIL_THIVI : 344- 351: vnvng GaiAiGhP igasg THIL_YEAST : 348- 355: vnvyg GavAlGhP lgcsg THIL_ZOORA : 341- 348: vnvng GaiAiGhP igasg THIM_CANTR : 347- 354: lnvyg GavAmGhP lgcsg THIM_HUMAN : 248- 254: gtvta Gn-AsGvA dgaga THIM_HUMAN : 346- 353: tnvng GaiAlGhP lggsg THIM_HUMAN : 374- 381: lrrrg GkyAvGsA ciggg THIM_RAT : 346- 353: tnvsg GaiAlGhP lggsg THIM_RAT : 374- 381: lrrrg GkyAvGsA ciggg YKA3_CAEEL : 122- 129: mttgm GmlAtGnA naiia B 2: 13.7494 42( 29) L-x(1,2)-A-x(0,1)-G-[AILV] Occurences: 42(29) NLTP_MOUSE : 357- 362: skghp Lg-AtGL aqcae NLTP_RAT : 357- 362: skghp Lg-AtGL aqcae THI1_RAT : 329- 334: aipaa LqkA-GL tvndi THI2_RAT : 339- 344: aipaa LqkA-GL tvndi THIK_CANTR : 81- 87: aignv LnqAaGA tehrg THIK_CANTR : 95- 99: hrgac La-A-GI pytaa THIK_ECOLI : 292- 297: askla LkkA-GL sasdi THIK_HUMAN : 329- 334: aipva LqkA-GL tvsdv THIK_PSEFR : 295- 300: atqka LkrA-GL nmadi THIK_YARLI : 84- 88: vcgnv La-A-GA gateh THIK_YARLI : 98- 102: hraac Lv-A-GI petvp THIK_YARLI : 372- 377: aighp Lg-AtGA rqfat THIK_YEAST : 327- 332: aipkv Le-AtGL qvqdi THIL_ALCEU : 38- 43: vikaa LerA-GV kpeqv THIL_BACSU : 38- 43: vmkea LqqA-GV sgddv THIL_CANTR : 81- 87: aignv LnqAaGA tehrg THIL_CANTR : 95- 99: hrgac La-A-GI pytaa THIL_CHRVI : 58- 62: ilgqv Lt-A-GV gqnpa THIL_CHRVI : 72- 76: arqtt Lh-A-GL phsvp THIL_CLOAB : 57- 61: ilgnv Lq-A-GL gqnpa THIL_CLODI : 62- 66: llggv Lt-A-GL gqnia THIL_CLODI : 76- 80: arqia Lg-A-GI pvekp THIL_HAEIN : 57- 61: imgnv Lq-A-GL gqnpa THIL_HAEIN : 71- 75: arqaa Lk-A-GI ekeip THIL_HAEIN : 301- 306: atqka LkkA-GI nlddi THIL_HUMAN : 109- 113: trqav Lg-A-GL pistp THIL_MYCLE : 57- 61: iigqv Lt-A-GA gqmpa THIL_PIG : 4- 8: qav Lg-A-GL pcntt THIL_RAT : 106- 110: trqat Lg-A-GL piatp THIL_RAT : 334- 339: avpkv LkyA-GL kkedi THIL_SACUV : 74- 78: arqva Lt-A-GL gnhiv THIL_SACUV : 305- 310: avpka LkhA-GI edins THIL_THIVI : 72- 76: arqtt Lm-A-GL phtvp THIL_YEAST : 74- 78: arqva La-A-GL snhiv THIL_YEAST : 305- 310: avpka LkhA-GI edins THIL_ZOORA : 38- 43: visav LerA-GV aagev THIM_CANTR : 74- 78: arqva Lk-A-GL pdsii THIM_HUMAN : 304- 309: aisga LkkA-GL slkdm THIM_RAT : 148- 152: kledt Lw-A-GL tdqhv THIM_RAT : 304- 309: aitga LkkA-GL slkdm YKA3_CAEEL : 93- 97: areaa Ll-A-GV pdkip YKA3_CAEEL : 337- 342: vipkl LdkA-GL tlkdv C 3: 13.6722 43( 29) V-x(2,4)-A-x(0,2)-G-x(3)-[ADEGNQST]-x(4)-[AGILP] Occurences: 43(29) NLTP_MOUSE : 57- 72: ipysa Veq--AcvGyvyGdstsG qraiy NLTP_RAT : 57- 72: ipysa Veq--AcvGyvyGestcG qraiy THI1_RAT : 130- 144: sglqa Vani-A--GgirNgsydI gmacg THI1_RAT : 130- 145: sglqa Vani-Ag-GirnGsydiG macgv THI1_RAT : 303- 320: lpilg VlrsyAvvGvppDimgiG payai THI2_RAT : 140- 154: sglqa Vani-A--GgirNgsydI gmacg THI2_RAT : 140- 155: sglqa Vani-Ag-GirnGsydiG macgv THI2_RAT : 313- 330: lpilg VlrsyAvvGvppDimgiG payai THIK_CANTR : 294- 309: iigky VlcstA--GvppEimgvG payai THIK_ECOLI : 267- 283: kprar Vrsm-AvvGcdpSimgyG pvpas THIK_HUMAN : 130- 144: sglqa Vasi-A--GgirNgsydI gmacg THIK_HUMAN : 130- 145: sglqa Vasi-Ag-GirnGsydiG macgv THIK_HUMAN : 303- 320: lpilg VlrsyAvvGvppDimgiG payai THIK_PSEFR : 269- 286: lepla VirsmAvaGvdpAimgyG pvpat THIK_YARLI : 83- 96: vvcgn Vla--A--GagaTehraA clvag THIK_YEAST : 276- 291: gnasq VsdgvA--GvllArrsvA nqlnl THIL_ALCEU : 56- 69: vimgq Vlt--A--GsgqNparqA aikag THIL_ALCEU : 56- 71: vimgq Vlt--AgsGqnpArqaaI kaglp THIL_BACSU : 155- 170: cafde Vhm--AvhGntaAkeyaI srreq THIL_CANTR : 294- 309: iigky VlcstA--GvppEimgvG pafai THIL_CHRVI : 57- 72: vilgq Vlt--AgvGqnpArqttL haglp THIL_CHRVI : 278- 293: pmarl VafasA--GvdpAimgtG pipas THIL_CHRVI : 278- 293: pmarl Vaf--AsaGvdpAimgtG pipas THIL_CLOAB : 56- 69: vilgn Vlq--A--GlgqNparqA sfkag THIL_CLOAB : 109- 122: agdad Vii--A--GgmeNmsraP ylann THIL_CLOAB : 276- 291: plaki VsygsA--GvdpAimgyG pfyat THIL_CLODI : 61- 74: sllgg Vlt--A--GlgqNiarqI algag THIL_CLODI : 61- 76: sllgg Vlt--AglGqniArqiaL gagip THIL_HAEIN : 56- 69: vimgn Vlq--A--GlgqNparqA alkag THIL_HAEIN : 56- 71: vimgn Vlq--AglGqnpArqaaL kagie THIL_HAEIN : 242- 258: kkegt VtagnAs-GindGaaalI lvses THIL_HUMAN : 147- 160: cghqd Vmv--A--GgmeSmsnvP yvmnr THIL_MYCLE : 109- 122: agefd Vvv--A--GgqeSmtkaP hllmd THIL_MYCLE : 274- 289: gltwl Veig-Ah-GvvaGpdstL qsqpa THIL_PIG : 3- 16: qa Vlg--A--GlpcNtttsP iikvc THIL_RAT : 144- 157: cghqd Vmv--A--GgmeSmsnvP yvmsr THIL_SACUV : 59- 74: iifgn Vls--AnlGqapArqvaL taglg THIL_SACUV : 112- 125: cgnad Vvv--A--GgceSmtnaP yympa THIL_THIVI : 57- 72: vilgq Vlt--AgcGqnpArqttL maglp THIL_THIVI : 278- 293: pmarl VafssA--GvdpAimgtG pipas THIL_YEAST : 59- 74: iifgn Vls--AnlGqapArqvaL aagls THIL_YEAST : 112- 125: cgnad Vvv--A--GgceSmtnaP yympa THIL_ZOORA : 56- 69: vilgq Vlp--A--GegqNparqA amkag THIL_ZOORA : 240- 256: dkegt VtagnAs-GlndGaaaaL lmsea THIM_CANTR : 59- 74: ivfgg Vlq--AnvGqapArqvaL kaglp THIM_HUMAN : 245- 261: kkdgt VtagnAs-GvadGagavI iased THIM_HUMAN : 378- 393: ggkya Vgs--AciGggqGiaviI qsta THIM_RAT : 245- 261: kkegt VtagnAs-GmsdGagvvI iased THIM_RAT : 378- 393: ggkya Vgs--AciGggqGisliI qnta YKA3_CAEEL : 428- 445: kgqya ViaacAagGhgvGmlieA ygk D 4: 13.2646 60( 29) A-x(1,2)-L-x(0,2)-G-x(2)-[AILP] Occurences: 60(29) NLTP_MOUSE : 104- 113: talfm AhqLiqGglA ncvla NLTP_RAT : 104- 113: talfm AqqLvqGglA ncvla THI1_RAT : 293- 300: arrsk AeeL--GlpI lgvlr THI1_RAT : 372- 379: nplgg AiaL--GhpL gctga THI2_RAT : 303- 310: arrsk AeeL--GlpI lgvlr THI2_RAT : 382- 389: nplgg AiaL--GhpL gctga THIK_CANTR : 361- 368: ningg AiaL--GhpL getga THIK_ECOLI : 256- 263: msesr AheL--GlkP rarvr THIK_ECOLI : 338- 345: nlngg AiaL--GhpL gcsga THIK_HUMAN : 293- 300: arrsk AeeL--GlpI lgvlr THIK_HUMAN : 372- 379: nplgg AvaL--GhpL gctga THIK_PSEFR : 259- 266: msaqr AkdL--GleP lavir THIK_YARLI : 286- 293: mrrsv AekL--GqpI lakfv THIK_YEAST : 370- 377: nprgg AiaL--GhpL gctga THIL_ALCEU : 247- 256: vtaan AsgLndGaaA vvvms THIL_ALCEU : 265- 272: msaak AkeL--GltP latik THIL_BACSU : 265- 272: mseek AaeL--GkrP latil THIL_BACSU : 266- 272: seeka Ae-L--GkrP latil THIL_BACSU : 344- 351: nvngg AiaL--GhpI gasga THIL_CANTR : 361- 368: ningg AiaL--GhpL getga THIL_CHRVI : 33- 40: teigt Av-Lk-GllA rtgla THIL_CHRVI : 266- 273: mkesk AkeL--GlkP marlv THIL_CLOAB : 26- 33: lkdvp AvdL--GatA ikeav THIL_CLOAB : 59- 65: gnvlq Ag-L--GqnP arqas THIL_CLOAB : 264- 271: msaek AkeL--GvkP lakiv THIL_CLOAB : 343- 350: nvngg AiaL--GhpI gasga THIL_CLODI : 31- 38: fksvs AveL--GvtA akeai THIL_CLODI : 64- 70: ggvlt Ag-L--GqnI arqia THIL_HAEIN : 59- 65: gnvlq Ag-L--GqnP arqaa THIL_HAEIN : 265- 272: vsesk AhaL--GlkA iakir THIL_HAEIN : 344- 351: nihgg AiaL--GhpI gasga THIL_HUMAN : 64- 71: lsllp AtkL--GsiA iqgai THIL_HUMAN : 107- 113: aptrq Av-L--GagL pistp THIL_HUMAN : 107- 115: aptrq Av-LgaGlpI stpct THIL_HUMAN : 283- 292: vtaan AstLndGaaA lvlmt THIL_HUMAN : 380- 387: ningg AvsL--GhpI gmsga THIL_MYCLE : 226- 234: rants AesLa-GlkP afrcg THIL_MYCLE : 328- 335: valas AreL--GiaP elvnv THIL_PIG : 2- 8: q Av-L--GagL pcntt THIL_RAT : 61- 68: lasqp AtkL--GtiA iqgai THIL_RAT : 104- 110: aptrq At-L--GagL piatp THIL_RAT : 104- 112: aptrq At-LgaGlpI atpct THIL_RAT : 280- 289: vtaan AstLndGaaA vvlmt THIL_RAT : 377- 384: nvhgg AvsL--GhpI gmsga THIL_SACUV : 27- 34: lsskt AveL--GaaA lkgal THIL_SACUV : 32- 40: avelg AaaLk-GalA kvpel THIL_SACUV : 33- 40: velga Aa-Lk-GalA kvpel THIL_SACUV : 62- 68: gnvls An-L--GqaP arqva THIL_SACUV : 76- 82: qvalt Ag-L--GnhI vattv THIL_SACUV : 349- 356: nvygg AvaL--GhpL gcsga THIL_THIVI : 266- 273: mkesk AkeL--GltP marlv THIL_YEAST : 27- 34: lsskt AveL--GavA lkgal THIL_YEAST : 32- 40: avelg AvaLk-GalA kvpel THIL_YEAST : 62- 68: gnvls An-L--GqaP arqva THIL_YEAST : 349- 356: nvygg AvaL--GhpL gcsga THIL_ZOORA : 245- 254: vtagn AsgLndGaaA allms THIM_CANTR : 251- 260: vtapn AskLndGgaA lvlvs THIM_HUMAN : 347- 354: nvngg AiaL--GhpL ggsgs THIM_RAT : 2- 9: m Al-Lr-GvfI vaakr THIM_RAT : 39- 47: efaar Aa-LsaGkvP petid THIM_RAT : 347- 354: nvsgg AiaL--GhpL ggsgs YKA3_CAEEL : 282- 291: vtaan AsyLtdGasA alimt E 5: 12.8914 58( 29) A-x(1,2)-G-x(1,3)-G-x-[AGPST] Occurences: 58(29) NLTP_MOUSE : 60- 69: saveq AcvGyvyGdS tsgqr NLTP_RAT : 60- 69: saveq AcvGyvyGeS tcgqr THI1_RAT : 374- 382: lggai Al-GhplGcT garqv THI2_RAT : 384- 392: lggai Al-GhplGcT garqv THIK_CANTR : 363- 371: nggai Al-GhplGeT garqy THIK_ECOLI : 143- 150: rnvak Aa-Gmm-GlT aemla THIK_ECOLI : 340- 348: nggai Al-GhplGcS garis THIK_HUMAN : 374- 382: lggav Al-GhplGcT garqv THIK_PSEFR : 146- 153: lyaak As-Gmm-GlT aemlg THIK_PSEFR : 343- 351: hggai Al-GhpfGcS garis THIK_YARLI : 85- 91: cgnvl Aa-Ga--GaT ehraa THIK_YARLI : 367- 375: rggai Ai-GhplGaT garqf THIK_YEAST : 16- 22: hlves Am-Gk--GeS krkns THIK_YEAST : 372- 380: rggai Al-GhplGcT garqv THIL_ALCEU : 13- 20: saart Av-Gkf-GgS lakip THIL_ALCEU : 247- 255: vtaan As-GlndGaA avvvm THIL_ALCEU : 346- 354: nggai Ai-GhpiGaS gcril THIL_BACSU : 247- 255: itagn Ap-GvndGaG afvlm THIL_BACSU : 346- 354: nggai Al-GhpiGaS garil THIL_CANTR : 363- 371: nggai Al-GhplGeT garqy THIL_CHRVI : 14- 21: dagrs Ai-Gtf-GgS lssls THIL_CHRVI : 248- 256: vtagn As-GindGaA mvvvm THIL_CHRVI : 347- 355: nggai Ai-GhpiGaS garvl THIL_CLOAB : 13- 20: savrt Ai-Gsy-GkS lkdvp THIL_CLOAB : 128- 137: ylann ArwGyrmGnA kfvde THIL_CLOAB : 345- 353: nggai Al-GhpiGaS garil THIL_CLODI : 18- 25: saart Av-Gsf-GgA fksvs THIL_CLODI : 75- 81: iarqi Al-Ga--GiP vekpa THIL_HAEIN : 247- 255: vtagn As-GindGaA alilv THIL_HAEIN : 346- 354: hggai Al-GhpiGaS garil THIL_HUMAN : 107- 114: aptrq AvlGa--GlP istpc THIL_MYCLE : 346- 354: nggai Av-GhplGmS garit THIL_MYCLE : 367- 374: valel ArrGs--GyG vaalc THIL_MYCLE : 367- 376: valel ArrGsgyGvA alcga THIL_MYCLE : 377- 385: gygva AlcGag-GqG dalil THIL_MYCLE : 381- 387: aalcg Ag-Gq--GdA lilra THIL_PIG : 2- 9: q AvlGa--GlP cnttt THIL_RAT : 104- 111: aptrq AtlGa--GlP iatpc THIL_SACUV : 131- 140: yympa ArgGakfGqT vlidg THIL_SACUV : 351- 359: yggav Al-GhplGcS garvv THIL_THIVI : 14- 21: dagrt Ai-Gtf-GgA lsalq THIL_THIVI : 248- 256: vtagn As-GindGaA mvvvm THIL_THIVI : 347- 355: nggai Ai-GhpiGaS garvl THIL_YEAST : 131- 140: yympa AraGakfGqT vlvdg THIL_YEAST : 351- 359: yggav Al-GhplGcS garvv THIL_ZOORA : 150- 159: dgltd AfyGyhmGtT aenva THIL_ZOORA : 245- 253: vtagn As-GlndGaA aallm THIL_ZOORA : 344- 352: nggai Ai-GhpiGaS garil THIM_CANTR : 131- 140: yylps ArsGaryGdA vmvdg THIM_CANTR : 350- 358: yggav Am-GhplGcS garii THIM_CANTR : 379- 387: ggrfg Aa-GvcnGgG gasai THIM_HUMAN : 250- 258: vtagn As-GvadGaG aviia THIM_HUMAN : 349- 357: nggai Al-GhplGgS gsrit THIM_HUMAN : 381- 388: yavgs AciGg--GqG iavii THIM_HUMAN : 381- 390: yavgs AciGggqGiA viiqs THIM_RAT : 250- 258: vtagn As-GmsdGaG vviia THIM_RAT : 349- 357: sggai Al-GhplGgS gsrit THIM_RAT : 381- 388: yavgs AciGg--GqG islii THIM_RAT : 381- 390: yavgs AciGggqGiS liiqn YKA3_CAEEL : 433- 440: viaac AagGh--GvG mliea YKA3_CAEEL : 433- 440: viaac Aa-Ggh-GvG mliea YKA3_CAEEL : 434- 440: iaaca Ag-Gh--GvG mliea F 6: 12.7486 52( 29) A-x(0,1)-G-x(1,2)-P-x-[ADEGNQST] Occurences: 52(29) NLTP_MOUSE : 318- 325: litye AlGlcPeG qggtl NLTP_RAT : 318- 325: lltye AlGlcPeG qggal THI1_RAT : 28- 33: aapcs A-Gf-PqA sasdv THI1_RAT : 374- 380: lggai AlGh-PlG ctgar THI2_RAT : 22- 27: vlghl A-Gr-PeS ssalq THI2_RAT : 384- 390: lggai AlGh-PlG ctgar THIK_CANTR : 96- 102: rgacl AaGi-PyT aafia THIK_CANTR : 97- 102: gacla A-Gi-PyT aafia THIK_CANTR : 299- 304: vlcst A-Gv-PpE imgvg THIK_CANTR : 363- 369: nggai AlGh-PlG etgar THIK_ECOLI : 340- 346: nggai AlGh-PlG csgar THIK_HUMAN : 374- 380: lggav AlGh-PlG ctgar THIK_PSEFR : 343- 349: hggai AlGh-PfG csgar THIK_YARLI : 100- 105: aaclv A-Gi-PeT vpfva THIK_YARLI : 367- 373: rggai AiGh-PlG atgar THIK_YEAST : 109- 115: raacl AsGi-PyS tpfva THIK_YEAST : 372- 378: rggai AlGh-PlG ctgar THIL_ALCEU : 41- 47: aaler A-GvkPeQ vsevi THIL_ALCEU : 346- 352: nggai AiGh-PiG asgcr THIL_BACSU : 73- 78: laarl A-Gm-PwS vpset THIL_BACSU : 346- 352: nggai AlGh-PiG asgar THIL_CANTR : 96- 102: rgacl AaGi-PyT aafia THIL_CANTR : 97- 102: gacla A-Gi-PyT aafia THIL_CANTR : 299- 304: vlcst A-Gv-PpE imgvg THIL_CANTR : 363- 369: nggai AlGh-PlG etgar THIL_CHRVI : 74- 79: qttlh A-Gl-PhS vpamt THIL_CHRVI : 305- 311: kclek A-GwtPaD ldlie THIL_CHRVI : 347- 353: nggai AiGh-PiG asgar THIL_CLOAB : 41- 47: eavkk A-GikPeD vnevi THIL_CLOAB : 73- 78: qasfk A-Gl-PvE ipamt THIL_CLOAB : 345- 351: nggai AlGh-PiG asgar THIL_CLODI : 78- 83: qialg A-Gi-PvE kpamt THIL_HAEIN : 346- 352: hggai AlGh-PiG asgar THIL_HUMAN : 79- 84: gaiek A-Gi-PkE evkea THIL_HUMAN : 111- 116: qavlg A-Gl-PiS tpctt THIL_MYCLE : 346- 352: nggai AvGh-PlG msgar THIL_PIG : 6- 11: qavlg A-Gl-PcN tttsp THIL_RAT : 76- 81: gaiek A-Gi-PkE evkev THIL_RAT : 108- 113: qatlg A-Gl-PiA tpctt THIL_SACUV : 351- 357: yggav AlGh-PlG csgar THIL_THIVI : 74- 79: qttlm A-Gl-PhT vpamt THIL_THIVI : 305- 311: dclkk A-GwaPaD ldlve THIL_THIVI : 347- 353: nggai AiGh-PiG asgar THIL_YEAST : 351- 357: yggav AlGh-PlG csgar THIL_ZOORA : 73- 78: qaamk A-Gv-PqE atawg THIL_ZOORA : 344- 350: nggai AiGh-PiG asgar THIM_CANTR : 76- 81: qvalk A-Gl-PdS iiast THIM_CANTR : 350- 356: yggav AmGh-PlG csgar THIM_HUMAN : 349- 355: nggai AlGh-PlG gsgsr THIM_RAT : 43- 49: raals A-GkvPpE tidsv THIM_RAT : 349- 355: sggai AlGh-PlG gsgsr YKA3_CAEEL : 302- 309: eeyal AnGykPkA ylrdy G 7: 11.5102 42( 29) L-x(0,1)-G-x(2,3)-L Occurences: 42(29) NLTP_MOUSE : 357- 362: skghp L-GatgL aqcae NLTP_RAT : 357- 362: skghp L-GatgL aqcae THI1_RAT : 296- 301: skaee L-GlpiL gvlrs THI1_RAT : 369- 375: ekvnp LgGaiaL ghplg THI1_RAT : 375- 379: ggaia L-Ghp-L gctga THI2_RAT : 306- 311: skaee L-GlpiL gvlrs THI2_RAT : 379- 385: ekvnp LgGaiaL ghplg THI2_RAT : 385- 389: ggaia L-Ghp-L gctga THIK_CANTR : 364- 368: ggaia L-Ghp-L getga THIK_ECOLI : 341- 345: ggaia L-Ghp-L gcsga THIK_HUMAN : 296- 301: skaee L-GlpiL gvlrs THIK_HUMAN : 369- 375: ekvnp LgGavaL ghplg THIK_HUMAN : 375- 379: ggava L-Ghp-L gctga THIK_PSEFR : 262- 267: qrakd L-GlepL avirs THIK_YARLI : 289- 294: svaek L-GqpiL akfvh THIK_YEAST : 357- 361: ycihk L-Gid-L nkvnp THIK_YEAST : 373- 377: ggaia L-Ghp-L gctga THIL_ALCEU : 268- 273: akake L-GltpL atiks THIL_BACSU : 268- 273: ekaae L-GkrpL atilg THIL_CANTR : 364- 368: ggaia L-Ghp-L getga THIL_CHRVI : 54- 58: idevi L-Gqv-L tagvg THIL_CLOAB : 53- 57: vnevi L-Gnv-L qaglg THIL_CLOAB : 267- 272: ekake L-GvkpL akivs THIL_CLODI : 57- 62: mides LlGgv-L taglg THIL_CLODI : 58- 62: idesl L-Ggv-L taglg THIL_HAEIN : 373- 378: ekdkk L-GlatL ciggg THIL_HUMAN : 56- 61: pigsf L-GslsL lpatk THIL_HUMAN : 109- 113: trqav L-Gag-L pistp THIL_MYCLE : 268- 273: ekaqq L-GltwL veiga THIL_PIG : 4- 8: qav L-Gag-L pcntt THIL_RAT : 106- 110: trqat L-Gag-L piatp THIL_SACUV : 30- 35: ktave L-GaaaL kgala THIL_SACUV : 352- 356: ggava L-Ghp-L gcsga THIL_THIVI : 54- 58: vsevi L-Gqv-L tagcg THIL_YEAST : 30- 35: ktave L-GavaL kgala THIL_YEAST : 352- 356: ggava L-Ghp-L gcsga THIL_ZOORA : 53- 57: vnevi L-Gqv-L pageg THIL_ZOORA : 87- 92: wgmnq LcGsg-L raval THIM_CANTR : 272- 277: aklkq L-GlkpL akisg THIM_HUMAN : 350- 354: ggaia L-Ghp-L ggsgs THIM_RAT : 350- 354: ggaia L-Ghp-L ggsgs YKA3_CAEEL : 393- 398: mdkln LwGgs-L sighp H 8: 11.5102 64( 29) L-x(1,3)-A-G Occurences: 64(29) NLTP_MOUSE : 372- 377: elcwq LrgeAG krqvp NLTP_MOUSE : 523- 527: ffqgk Lki-AG nmgla NLTP_RAT : 38- 43: rdypd LakeAG qkala NLTP_RAT : 162- 167: pfapq LfgsAG kehme NLTP_RAT : 372- 377: elcwq LrgeAG krqvp NLTP_RAT : 523- 527: ffqgk Lki-AG nmgla THI1_RAT : 8- 13: rlqvv LghlAG rsess THI1_RAT : 92- 97: svgnv LqpgAG aamar THI1_RAT : 329- 333: aipaa Lqk-AG ltvnd THI2_RAT : 18- 23: rlqvv LghlAG rpess THI2_RAT : 102- 107: svgnv LepgAG avmar THI2_RAT : 339- 343: aipaa Lqk-AG ltvnd THIK_CANTR : 81- 86: aignv LnqaAG atehr THIK_CANTR : 95- 98: hrgac La--AG ipyta THIK_CANTR : 295- 300: igkyv LcstAG vppei THIK_ECOLI : 292- 296: askla Lkk-AG lsasd THIK_HUMAN : 92- 97: cvgnv LqpgAG aimar THIK_HUMAN : 329- 333: aipva Lqk-AG ltvsd THIK_PSEFR : 295- 299: atqka Lkr-AG lnmad THIK_YARLI : 84- 87: vcgnv La--AG agate THIK_YARLI : 84- 89: vcgnv LaagAG atehr THIK_YARLI : 98- 101: hraac Lv--AG ipetv THIK_YEAST : 94- 99: acgnv LnvgAG atehr THIL_ALCEU : 38- 42: vikaa Ler-AG vkpeq THIL_ALCEU : 57- 60: imgqv Lt--AG sgqnp THIL_BACSU : 38- 42: vmkea Lqq-AG vsgdd THIL_BACSU : 110- 113: qdadi Lv--AG gmesm THIL_CANTR : 81- 86: aignv LnqaAG atehr THIL_CANTR : 95- 98: hrgac La--AG ipyta THIL_CANTR : 295- 300: igkyv LcstAG vppei THIL_CHRVI : 58- 61: ilgqv Lt--AG vgqnp THIL_CHRVI : 72- 75: arqtt Lh--AG lphsv THIL_CHRVI : 302- 306: astkc Lek-AG wtpad THIL_CLOAB : 57- 60: ilgnv Lq--AG lgqnp THIL_CLODI : 62- 65: llggv Lt--AG lgqni THIL_CLODI : 76- 79: arqia Lg--AG ipvek THIL_HAEIN : 57- 60: imgnv Lq--AG lgqnp THIL_HAEIN : 71- 74: arqaa Lk--AG iekei THIL_HAEIN : 301- 305: atqka Lkk-AG inldd THIL_HUMAN : 109- 112: trqav Lg--AG lpist THIL_MYCLE : 57- 60: iigqv Lt--AG agqmp THIL_MYCLE : 57- 62: iigqv LtagAG qmpar THIL_MYCLE : 101- 105: aladq Lir-AG efdvv THIL_MYCLE : 378- 382: ygvaa Lcg-AG gqgda THIL_PIG : 4- 7: qav Lg--AG lpcnt THIL_RAT : 106- 109: trqat Lg--AG lpiat THIL_RAT : 334- 338: avpkv Lky-AG lkked THIL_SACUV : 74- 77: arqva Lt--AG lgnhi THIL_SACUV : 305- 309: avpka Lkh-AG iedin THIL_THIVI : 58- 61: ilgqv Lt--AG cgqnp THIL_THIVI : 72- 75: arqtt Lm--AG lphtv THIL_THIVI : 302- 306: astdc Lkk-AG wapad THIL_YEAST : 74- 77: arqva La--AG lsnhi THIL_YEAST : 305- 309: avpka Lkh-AG iedin THIL_ZOORA : 38- 42: visav Ler-AG vaage THIL_ZOORA : 57- 60: ilgqv Lp--AG egqnp THIL_ZOORA : 299- 303: asrka Ler-AG wkigd THIM_CANTR : 74- 77: arqva Lk--AG lpdsi THIM_HUMAN : 41- 44: aakaa Ls--AG kvspe THIM_HUMAN : 304- 308: aisga Lkk-AG lslkd THIM_RAT : 41- 44: aaraa Ls--AG kvppe THIM_RAT : 148- 151: kledt Lw--AG ltdqh THIM_RAT : 304- 308: aitga Lkk-AG lslkd YKA3_CAEEL : 93- 96: areaa Ll--AG vpdki YKA3_CAEEL : 336- 341: yvipk LldkAG ltlkd YKA3_CAEEL : 337- 341: vipkl Ldk-AG ltlkd I 9: 11.5102 49( 29) L-x(2,4)-G-L Occurences: 49(29) NLTP_MOUSE : 107- 112: fmahq Liqg-GL ancvl NLTP_MOUSE : 147- 153: khiev LidkyGL sahpi NLTP_MOUSE : 357- 362: skghp Lgat-GL aqcae NLTP_MOUSE : 388- 394: gakva LqhnlGL ggavv NLTP_RAT : 107- 112: fmaqq Lvqg-GL ancvl NLTP_RAT : 357- 362: skghp Lgat-GL aqcae NLTP_RAT : 388- 394: gakva LqhnlGL ggaav THI1_RAT : 329- 334: aipaa Lqka-GL tvndi THI2_RAT : 339- 344: aipaa Lqka-GL tvndi THIK_CANTR : 318- 323: aipev Lkrt-GL tvddi THIK_ECOLI : 292- 297: askla Lkka-GL sasdi THIK_HUMAN : 329- 334: aipva Lqka-GL tvsdv THIK_PSEFR : 295- 300: atqka Lkra-GL nmadi THIK_YARLI : 60- 64: ellas Lle--GL vkesk THIK_YARLI : 322- 327: aipav Ledl-GL tvndv THIK_YEAST : 327- 332: aipkv Leat-GL qvqdi THIL_ALCEU : 226- 232: rqgat LdsmsGL kpafd THIL_BACSU : 142- 148: gelrd LmvydGL tcafd THIL_BACSU : 300- 306: faink LlkknGL tvqdi THIL_BACSU : 301- 306: ainkl Lkkn-GL tvqdi THIL_CANTR : 318- 323: aipev Lkrt-GL tvddi THIL_CHRVI : 38- 44: avlkg LlartGL apeqi THIL_CHRVI : 39- 44: vlkgl Lart-GL apeqi THIL_CHRVI : 72- 76: arqtt Lha--GL phsvp THIL_CLOAB : 57- 61: ilgnv Lqa--GL gqnpa THIL_CLODI : 62- 66: llggv Lta--GL gqnia THIL_HAEIN : 57- 61: imgnv Lqa--GL gqnpa THIL_HUMAN : 109- 113: trqav Lga--GL pistp THIL_HUMAN : 178- 184: vkled LivkdGL tdvyn THIL_HUMAN : 337- 342: aasmv Lkdv-GL kkedi THIL_MYCLE : 143- 148: tivdh Layd-GL hdvft THIL_PIG : 4- 8: qav Lga--GL pcntt THIL_RAT : 15- 19: vvrrp Llr--GL lqevr THIL_RAT : 106- 110: trqat Lga--GL piatp THIL_RAT : 175- 181: vkled LivkdGL tdvyn THIL_RAT : 334- 339: avpkv Lkya-GL kkedi THIL_SACUV : 74- 78: arqva Lta--GL gnhiv THIL_THIVI : 72- 76: arqtt Lma--GL phtvp THIL_YEAST : 74- 78: arqva Laa--GL snhiv THIL_ZOORA : 87- 92: wgmnq Lcgs-GL raval THIM_CANTR : 74- 78: arqva Lka--GL pdsii THIM_CANTR : 269- 274: vseak Lkql-GL kplak THIM_HUMAN : 69- 75: sdaiy LarhvGL rvgip THIM_HUMAN : 304- 309: aisga Lkka-GL slkdm THIM_RAT : 69- 75: sdaay LarhvGL rvgvp THIM_RAT : 148- 152: kledt Lwa--GL tdqhv THIM_RAT : 304- 309: aitga Lkka-GL slkdm YKA3_CAEEL : 336- 342: yvipk LldkaGL tlkdv YKA3_CAEEL : 337- 342: vipkl Ldka-GL tlkdv J 10: 11.5102 74( 29) A-x(3)-A-x(0,2)-G Occurences: 74(29) NLTP_MOUSE : 56- 63: qipys AveqAcvG yvygd NLTP_RAT : 56- 63: qipys AveqAcvG yvyge THI1_RAT : 24- 29: salqa ApcsA--G fpqas THI1_RAT : 328- 333: yaipa AlqkA--G ltvnd THI2_RAT : 338- 343: yaipa AlqkA--G ltvnd THIK_CANTR : 32- 38: vviva AyrtAi-G kgfkg THIK_CANTR : 93- 98: tehrg AclaA--G ipyta THIK_CANTR : 202- 208: synka AkavAa-G afkse THIK_ECOLI : 291- 296: paskl AlkkA--G lsasd THIK_HUMAN : 47- 52: hgrrt AicrA--G rggfk THIK_HUMAN : 47- 54: hgrrt AicrAgrG gfkdt THIK_HUMAN : 328- 333: yaipv AlqkA--G ltvsd THIK_PSEFR : 294- 299: patqk AlkrA--G lnmad THIK_YARLI : 96- 101: tehra AclvA--G ipetv THIK_YARLI : 204- 210: syeka AaaqAa-G kfdqe THIK_YARLI : 205- 210: yekaa AaqaA--G kfdqe THIK_YEAST : 41- 47: vviva AnrsAi-G kgfkg THIK_YEAST : 105- 111: atehr AaclAs-G ipyst THIL_ALCEU : 9- 15: vvivs AartAv-G kfggs THIL_ALCEU : 37- 42: vvika AlerA--G vkpeq THIL_ALCEU : 69- 74: nparq AaikA--G lpamv THIL_ALCEU : 188- 193: qnkae AaqkA--G kfdee THIL_ALCEU : 235- 240: sglkp AfdkA--G tvtaa THIL_BACSU : 37- 42: ivmke AlqqA--G vsgdd THIL_BACSU : 69- 74: ipsrl AarlA--G mpwsv THIL_BACSU : 186- 193: rshar AakaAdeG kfqde THIL_BACSU : 233- 240: qlakl ApiyAsdG sitag THIL_CANTR : 32- 38: vviva AyrtAi-G kgfkg THIL_CANTR : 93- 98: tehrg AclaA--G ipyta THIL_CANTR : 202- 208: synka AkavAs-G afkse THIL_CHRVI : 10- 16: ivivd AgrsAi-G tfggs THIL_CHRVI : 189- 194: qqkte AaqkA--G rfqde THIL_CHRVI : 279- 284: marlv AfasA--G vdpai THIL_CLOAB : 9- 15: vvias AvrtAi-G sygks THIL_CLOAB : 37- 42: taike AvkkA--G ikped THIL_CLOAB : 69- 74: nparq AsfkA--G lpvei THIL_CLOAB : 299- 304: yatka AiekA--G wtvde THIL_CLODI : 14- 20: vvias AartAv-G sfgga THIL_CLODI : 71- 77: lgqni ArqiAl-G agipv THIL_HAEIN : 69- 74: nparq AalkA--G iekei THIL_HAEIN : 222- 228: deypk AdttAe-G laklk THIL_HAEIN : 300- 305: patqk AlkkA--G inldd THIL_HUMAN : 75- 80: iaiqg AiekA--G ipkee THIL_HUMAN : 107- 112: aptrq AvlgA--G lpist THIL_HUMAN : 224- 229: ytrsk AaweA--G kfgne THIL_MYCLE : 69- 74: mparq AavaA--G igwdv THIL_MYCLE : 69- 76: mparq AavaAgiG wdvpa THIL_MYCLE : 226- 231: rants AeslA--G lkpaf THIL_MYCLE : 363- 370: itlhv AlelArrG sgygv THIL_MYCLE : 377- 382: gygva AlcgA--G gqgda THIL_MYCLE : 377- 383: gygva AlcgAg-G qgdal THIL_PIG : 2- 7: q AvlgA--G lpcnt THIL_RAT : 72- 77: iaiqg AiekA--G ipkee THIL_RAT : 104- 109: aptrq AtlgA--G lpiat THIL_SACUV : 131- 138: yympa ArggAkfG qtvli THIL_SACUV : 304- 309: lavpk AlkhA--G iedin THIL_THIVI : 10- 16: ivivd AgrtAi-G tfgga THIL_THIVI : 279- 284: marlv AfssA--G vdpai THIL_YEAST : 131- 138: yympa AragAkfG qtvlv THIL_YEAST : 304- 309: lavpk AlkhA--G iedin THIL_ZOORA : 41- 46: avler AgvaA--G evnev THIL_ZOORA : 69- 74: nparq AamkA--G vpqea THIL_ZOORA : 298- 303: pasrk AlerA--G wkigd THIM_CANTR : 131- 138: yylps ArsgAryG davmv THIM_CANTR : 304- 309: lavpk AvkhA--G ltvdr THIM_HUMAN : 39- 44: efaak AalsA--G kvspe THIM_HUMAN : 192- 197: qqrwk AandA--G yfnde THIM_HUMAN : 250- 256: vtagn AsgvAd-G agavi THIM_HUMAN : 303- 308: paisg AlkkA--G lslkd THIM_HUMAN : 377- 384: rggky AvgsAciG ggqgi THIM_RAT : 39- 44: efaar AalsA--G kvppe THIM_RAT : 192- 197: qqrwk AaneA--G yfnee THIM_RAT : 303- 308: paitg AlkkA--G lslkd THIM_RAT : 377- 384: rggky AvgsAciG ggqgi YKA3_CAEEL : 91- 96: niare AallA--G vpdki YKA3_CAEEL : 224- 231: rshtl AseaAknG kftdv YKA3_CAEEL : 430- 435: qyavi AacaA--G ghgvg YKA3_CAEEL : 430- 436: qyavi AacaAg-G hgvgm K 11: 11.5102 103( 29) A-x(3,4)-A-x(0,1)-G Occurences: 103(29) NLTP_MOUSE : 113- 120: iqggl AncvlAlG fekme NLTP_MOUSE : 422- 428: hqvsa AptssA-G dgfka NLTP_RAT : 113- 120: vqggl AncvlAlG fekme NLTP_RAT : 422- 428: hqisa AptssA-G dgfka THI1_RAT : 23- 29: ssalq AapcsA-G fpqas THI1_RAT : 24- 29: salqa Apcs-A-G fpqas THI1_RAT : 129- 135: ssglq AvaniA-G girng THI1_RAT : 129- 136: ssglq AvaniAgG irngs THI1_RAT : 327- 333: ayaip AalqkA-G ltvnd THI1_RAT : 328- 333: yaipa Alqk-A-G ltvnd THI2_RAT : 139- 145: ssglq AvaniA-G girng THI2_RAT : 139- 146: ssglq AvaniAgG irngs THI2_RAT : 337- 343: ayaip AalqkA-G ltvnd THI2_RAT : 338- 343: yaipa Alqk-A-G ltvnd THIK_CANTR : 31- 38: dvviv AayrtAiG kgfkg THIK_CANTR : 32- 38: vviva Ayrt-AiG kgfkg THIK_CANTR : 93- 98: tehrg Acla-A-G ipyta THIK_CANTR : 201- 208: ksynk AakavAaG afkse THIK_CANTR : 202- 208: synka AkavaA-G afkse THIK_CANTR : 202- 208: synka Akav-AaG afkse THIK_ECOLI : 291- 296: paskl Alkk-A-G lsasd THIK_HUMAN : 47- 52: hgrrt Aicr-A-G rggfk THIK_HUMAN : 129- 135: ssglq AvasiA-G girng THIK_HUMAN : 129- 136: ssglq AvasiAgG irngs THIK_HUMAN : 328- 333: yaipv Alqk-A-G ltvsd THIK_PSEFR : 294- 299: patqk Alkr-A-G lnmad THIK_YARLI : 95- 101: atehr AaclvA-G ipetv THIK_YARLI : 96- 101: tehra Aclv-A-G ipetv THIK_YARLI : 126- 132: avndv AnkirA-G qidig THIK_YARLI : 203- 210: ksyek AaaaqAaG kfdqe THIK_YARLI : 204- 210: syeka AaaqaA-G kfdqe THIK_YARLI : 204- 210: syeka Aaaq-AaG kfdqe THIK_YARLI : 205- 210: yekaa Aaqa-A-G kfdqe THIK_YEAST : 40- 47: dvviv AanrsAiG kgfkg THIK_YEAST : 41- 47: vviva Anrs-AiG kgfkg THIK_YEAST : 105- 111: atehr Aacl-AsG ipyst THIL_ALCEU : 9- 15: vvivs Aart-AvG kfggs THIL_ALCEU : 36- 42: avvik AalerA-G vkpeq THIL_ALCEU : 37- 42: vvika Aler-A-G vkpeq THIL_ALCEU : 69- 74: nparq Aaik-A-G lpamv THIL_ALCEU : 99- 105: avmla AnaimA-G daeiv THIL_ALCEU : 107- 113: imagd AeivvA-G gqenm THIL_ALCEU : 107- 114: imagd AeivvAgG qenms THIL_ALCEU : 174- 181: gitre AqdefAvG sqnka THIL_ALCEU : 188- 193: qnkae Aaqk-A-G kfdee THIL_ALCEU : 235- 240: sglkp Afdk-A-G tvtaa THIL_BACSU : 37- 42: ivmke Alqq-A-G vsgdd THIL_BACSU : 69- 74: ipsrl Aarl-A-G mpwsv THIL_BACSU : 107- 113: iraqd AdilvA-G gmesm THIL_BACSU : 107- 114: iraqd AdilvAgG mesms THIL_CANTR : 31- 38: dvviv AayrtAiG kgfkg THIL_CANTR : 32- 38: vviva Ayrt-AiG kgfkg THIL_CANTR : 93- 98: tehrg Acla-A-G ipyta THIL_CANTR : 201- 208: ksynk AakavAsG afkse THIL_CANTR : 202- 208: synka Akav-AsG afkse THIL_CHRVI : 10- 16: ivivd Agrs-AiG tfggs THIL_CHRVI : 99- 106: kavhl AmqaiAcG dadiv THIL_CHRVI : 108- 114: iacgd AdiviA-G gqesm THIL_CHRVI : 108- 115: iacgd AdiviAgG qesms THIL_CHRVI : 189- 194: qqkte Aaqk-A-G rfqde THIL_CHRVI : 279- 284: marlv Afas-A-G vdpai THIL_CLOAB : 9- 15: vvias Avrt-AiG sygks THIL_CLOAB : 37- 42: taike Avkk-A-G ikped THIL_CLOAB : 69- 74: nparq Asfk-A-G lpvei THIL_CLOAB : 99- 105: tvsla AqiikA-G dadvi THIL_CLOAB : 107- 113: ikagd AdviiA-G gmenm THIL_CLOAB : 107- 114: ikagd AdviiAgG menms THIL_CLOAB : 298- 304: fyatk AaiekA-G wtvde THIL_CLOAB : 299- 304: yatka Aiek-A-G wtvde THIL_CLODI : 14- 20: vvias Aart-AvG sfgga THIL_CLODI : 71- 77: lgqni Arqi-AlG agipv THIL_HAEIN : 69- 74: nparq Aalk-A-G iekei THIL_HAEIN : 222- 228: deypk Adtt-AeG laklk THIL_HAEIN : 300- 305: patqk Alkk-A-G inldd THIL_HUMAN : 75- 80: iaiqg Aiek-A-G ipkee THIL_HUMAN : 107- 112: aptrq Avlg-A-G lpist THIL_HUMAN : 224- 229: ytrsk Aawe-A-G kfgne THIL_MYCLE : 69- 74: mparq Aava-A-G igwdv THIL_MYCLE : 226- 231: rants Aesl-A-G lkpaf THIL_MYCLE : 278- 284: lveig AhgvvA-G pdstl THIL_MYCLE : 376- 382: sgygv AalcgA-G gqgda THIL_MYCLE : 376- 383: sgygv AalcgAgG qgdal THIL_MYCLE : 377- 382: gygva Alcg-A-G gqgda THIL_MYCLE : 377- 383: gygva Alcg-AgG qgdal THIL_PIG : 2- 7: q Avlg-A-G lpcnt THIL_RAT : 72- 77: iaiqg Aiek-A-G ipkee THIL_RAT : 104- 109: aptrq Atlg-A-G lpiat THIL_SACUV : 110- 116: ikcgn AdvvvA-G gcesm THIL_SACUV : 110- 117: ikcgn AdvvvAgG cesmt THIL_SACUV : 154- 161: dglnd AydglAmG vhaek THIL_SACUV : 304- 309: lavpk Alkh-A-G iedin THIL_THIVI : 10- 16: ivivd Agrt-AiG tfgga THIL_THIVI : 99- 106: kavhl AmqavAcG daeiv THIL_THIVI : 108- 114: vacgd AeiviA-G gqesm THIL_THIVI : 108- 115: vacgd AeiviAgG qesms THIL_THIVI : 279- 284: marlv Afss-A-G vdpai THIL_YEAST : 110- 116: ikcgn AdvvvA-G gcesm THIL_YEAST : 110- 117: ikcgn AdvvvAgG cesmt THIL_YEAST : 154- 161: dglnd AydglAmG vhaek THIL_YEAST : 304- 309: lavpk Alkh-A-G iedin THIL_ZOORA : 8- 15: psivi AsartAvG sfnga THIL_ZOORA : 36- 42: atvis AvlerA-G vaage THIL_ZOORA : 41- 46: avler Agva-A-G evnev THIL_ZOORA : 69- 74: nparq Aamk-A-G vpqea THIL_ZOORA : 107- 113: iatgd AsiivA-G gmesm THIL_ZOORA : 107- 114: iatgd AsiivAgG mesms THIL_ZOORA : 298- 303: pasrk Aler-A-G wkigd THIM_CANTR : 304- 309: lavpk Avkh-A-G ltvdr THIM_HUMAN : 39- 44: efaak Aals-A-G kvspe THIM_HUMAN : 192- 197: qqrwk Aand-A-G yfnde THIM_HUMAN : 250- 256: vtagn Asgv-AdG agavi THIM_HUMAN : 303- 308: paisg Alkk-A-G lslkd THIM_RAT : 39- 44: efaar Aals-A-G kvppe THIM_RAT : 192- 197: qqrwk Aane-A-G yfnee THIM_RAT : 303- 308: paitg Alkk-A-G lslkd YKA3_CAEEL : 91- 96: niare Aall-A-G vpdki YKA3_CAEEL : 129- 135: latgn AnaiiA-G gvell YKA3_CAEEL : 129- 136: latgn AnaiiAgG vells YKA3_CAEEL : 430- 435: qyavi Aaca-A-G ghgvg YKA3_CAEEL : 430- 436: qyavi Aaca-AgG hgvgm L 12: 11.5102 112( 29) A-x(2,3)-A-x(0,1)-G Occurences: 112(29) NLTP_MOUSE : 39- 43: dypdm Ake-A-G qkale NLTP_RAT : 39- 43: dypdl Ake-A-G qkala THI1_RAT : 24- 29: salqa ApcsA-G fpqas THI1_RAT : 131- 135: glqav Ani-A-G girng THI1_RAT : 131- 136: glqav Ani-AgG irngs THI1_RAT : 328- 333: yaipa AlqkA-G ltvnd THI2_RAT : 141- 145: glqav Ani-A-G girng THI2_RAT : 141- 146: glqav Ani-AgG irngs THI2_RAT : 338- 343: yaipa AlqkA-G ltvnd THIK_CANTR : 32- 38: vviva AyrtAiG kgfkg THIK_CANTR : 93- 98: tehrg AclaA-G ipyta THIK_CANTR : 93- 98: tehrg Acl-AaG ipyta THIK_CANTR : 202- 208: synka AkavAaG afkse THIK_CANTR : 204- 208: nkaak Ava-A-G afkse THIK_ECOLI : 141- 145: lsrnv Aka-A-G mmglt THIK_ECOLI : 291- 296: paskl AlkkA-G lsasd THIK_HUMAN : 47- 52: hgrrt AicrA-G rggfk THIK_HUMAN : 131- 135: glqav Asi-A-G girng THIK_HUMAN : 131- 136: glqav Asi-AgG irngs THIK_HUMAN : 328- 333: yaipv AlqkA-G ltvsd THIK_PSEFR : 143- 148: hmsly Aak-AsG mmglt THIK_PSEFR : 294- 299: patqk AlkrA-G lnmad THIK_YARLI : 85- 89: cgnvl Aag-A-G atehr THIK_YARLI : 96- 101: tehra AclvA-G ipetv THIK_YARLI : 204- 210: syeka AaaqAaG kfdqe THIK_YARLI : 205- 210: yekaa AaqaA-G kfdqe THIK_YARLI : 205- 210: yekaa Aaq-AaG kfdqe THIK_YARLI : 206- 210: ekaaa Aqa-A-G kfdqe THIK_YARLI : 256- 261: gklkp Afs-AeG tthag THIK_YEAST : 41- 47: vviva AnrsAiG kgfkg THIK_YEAST : 105- 111: atehr AaclAsG ipyst THIK_YEAST : 106- 111: tehra Acl-AsG ipyst THIL_ALCEU : 9- 15: vvivs AartAvG kfggs THIL_ALCEU : 10- 15: vivsa Art-AvG kfggs THIL_ALCEU : 37- 42: vvika AlerA-G vkpeq THIL_ALCEU : 69- 74: nparq AaikA-G lpamv THIL_ALCEU : 70- 74: parqa Aik-A-G lpamv THIL_ALCEU : 101- 105: mlaan Aim-A-G daeiv THIL_ALCEU : 188- 193: qnkae AaqkA-G kfdee THIL_ALCEU : 189- 193: nkaea Aqk-A-G kfdee THIL_ALCEU : 235- 240: sglkp AfdkA-G tvtaa THIL_ALCEU : 244- 249: agtvt Aan-AsG lndga THIL_BACSU : 37- 42: ivmke AlqqA-G vsgdd THIL_BACSU : 69- 74: ipsrl AarlA-G mpwsv THIL_BACSU : 70- 74: psrla Arl-A-G mpwsv THIL_BACSU : 124- 128: snipy Avp-A-G rwgar THIL_BACSU : 244- 249: dgsit Agn-ApG vndga THIL_CANTR : 32- 38: vviva AyrtAiG kgfkg THIL_CANTR : 93- 98: tehrg AclaA-G ipyta THIL_CANTR : 93- 98: tehrg Acl-AaG ipyta THIL_CANTR : 202- 208: synka AkavAsG afkse THIL_CHRVI : 10- 16: ivivd AgrsAiG tfggs THIL_CHRVI : 189- 194: qqkte AaqkA-G rfqde THIL_CHRVI : 190- 194: qktea Aqk-A-G rfqde THIL_CHRVI : 245- 250: dgsvt Agn-AsG indga THIL_CHRVI : 279- 284: marlv AfasA-G vdpai THIL_CLOAB : 9- 15: vvias AvrtAiG sygks THIL_CLOAB : 37- 42: taike AvkkA-G ikped THIL_CLOAB : 69- 74: nparq AsfkA-G lpvei THIL_CLOAB : 243- 248: dgtvt Agn-AsG lndca THIL_CLOAB : 299- 304: yatka AiekA-G wtvde THIL_CLODI : 14- 20: vvias AartAvG sfgga THIL_CLODI : 15- 20: viasa Art-AvG sfgga THIL_CLODI : 71- 77: lgqni ArqiAlG agipv THIL_CLODI : 75- 79: iarqi Alg-A-G ipvek THIL_HAEIN : 69- 74: nparq AalkA-G iekei THIL_HAEIN : 70- 74: parqa Alk-A-G iekei THIL_HAEIN : 222- 228: deypk AdttAeG laklk THIL_HAEIN : 244- 249: egtvt Agn-AsG indga THIL_HAEIN : 300- 305: patqk AlkkA-G inldd THIL_HUMAN : 75- 80: iaiqg AiekA-G ipkee THIL_HUMAN : 107- 112: aptrq AvlgA-G lpist THIL_HUMAN : 224- 229: ytrsk AaweA-G kfgne THIL_HUMAN : 225- 229: trska Awe-A-G kfgne THIL_MYCLE : 69- 74: mparq AavaA-G igwdv THIL_MYCLE : 69- 74: mparq Aav-AaG igwdv THIL_MYCLE : 70- 74: parqa Ava-A-G igwdv THIL_MYCLE : 226- 231: rants AeslA-G lkpaf THIL_MYCLE : 377- 382: gygva AlcgA-G gqgda THIL_MYCLE : 377- 383: gygva AlcgAgG qgdal THIL_PIG : 2- 7: q AvlgA-G lpcnt THIL_RAT : 72- 77: iaiqg AiekA-G ipkee THIL_RAT : 104- 109: aptrq AtlgA-G lpiat THIL_RAT : 222- 226: trske Awd-A-G kfane THIL_SACUV : 73- 77: parqv Alt-A-G lgnhi THIL_SACUV : 304- 309: lavpk AlkhA-G iedin THIL_THIVI : 10- 16: ivivd AgrtAiG tfgga THIL_THIVI : 245- 250: qgtvt Agn-AsG indga THIL_THIVI : 279- 284: marlv AfssA-G vdpai THIL_YEAST : 73- 77: parqv Ala-A-G lsnhi THIL_YEAST : 130- 134: pyymp Aar-A-G akfgq THIL_YEAST : 304- 309: lavpk AlkhA-G iedin THIL_ZOORA : 10- 15: ivias Art-AvG sfnga THIL_ZOORA : 41- 46: avler AgvaA-G evnev THIL_ZOORA : 41- 46: avler Agv-AaG evnev THIL_ZOORA : 69- 74: nparq AamkA-G vpqea THIL_ZOORA : 70- 74: parqa Amk-A-G vpqea THIL_ZOORA : 125- 129: maphc Ahl-A-G gvkmg THIL_ZOORA : 125- 130: maphc Ahl-AgG vkmgd THIL_ZOORA : 242- 247: egtvt Agn-AsG lndga THIL_ZOORA : 298- 303: pasrk AlerA-G wkigd THIM_CANTR : 73- 77: parqv Alk-A-G lpdsi THIM_CANTR : 304- 309: lavpk AvkhA-G ltvdr THIM_HUMAN : 39- 44: efaak AalsA-G kvspe THIM_HUMAN : 40- 44: faaka Als-A-G kvspe THIM_HUMAN : 192- 197: qqrwk AandA-G yfnde THIM_HUMAN : 193- 197: qrwka And-A-G yfnde THIM_HUMAN : 247- 252: dgtvt Agn-AsG vadga THIM_HUMAN : 250- 256: vtagn AsgvAdG agavi THIM_HUMAN : 254- 258: nasgv Adg-A-G aviia THIM_HUMAN : 303- 308: paisg AlkkA-G lslkd THIM_RAT : 39- 44: efaar AalsA-G kvppe THIM_RAT : 40- 44: faara Als-A-G kvppe THIM_RAT : 192- 197: qqrwk AaneA-G yfnee THIM_RAT : 193- 197: qrwka Ane-A-G yfnee THIM_RAT : 247- 252: egtvt Agn-AsG msdga THIM_RAT : 303- 308: paitg AlkkA-G lslkd YKA3_CAEEL : 91- 96: niare AallA-G vpdki YKA3_CAEEL : 92- 96: iarea All-A-G vpdki YKA3_CAEEL : 131- 135: tgnan Aii-A-G gvell YKA3_CAEEL : 131- 136: tgnan Aii-AgG vells YKA3_CAEEL : 430- 435: qyavi AacaA-G ghgvg YKA3_CAEEL : 430- 435: qyavi Aac-AaG ghgvg YKA3_CAEEL : 430- 436: qyavi AacaAgG hgvgm YKA3_CAEEL : 431- 435: yavia Aca-A-G ghgvg YKA3_CAEEL : 431- 436: yavia Aca-AgG hgvgm M 13: 11.0102 65( 29) A-x(0,1)-G-x(0,2)-L Occurences: 65(29) NLTP_MOUSE : 318- 321: litye AlG--L cpegq NLTP_MOUSE : 359- 362: ghplg AtG--L aqcae NLTP_RAT : 318- 321: lltye AlG--L cpegq NLTP_RAT : 359- 362: ghplg AtG--L aqcae THI1_RAT : 332- 334: aalqk A-G--L tvndi THI1_RAT : 374- 379: lggai AlGhpL gctga THI2_RAT : 342- 344: aalqk A-G--L tvndi THI2_RAT : 384- 389: lggai AlGhpL gctga THIK_CANTR : 76- 81: liedv AiGnvL nqaag THIK_CANTR : 363- 368: nggai AlGhpL getga THIK_ECOLI : 197- 201: tgghd AdGv-L kqfny THIK_ECOLI : 295- 297: lalkk A-G--L sasdi THIK_ECOLI : 340- 345: nggai AlGhpL gcsga THIK_HUMAN : 332- 334: valqk A-G--L tvsdv THIK_HUMAN : 374- 379: lggav AlGhpL gctga THIK_PSEFR : 298- 300: kalkr A-G--L nmadi THIK_YARLI : 16- 19: leqnp AkG--L daits THIK_YARLI : 275- 279: qisdg A-GavL lmrrs THIK_YARLI : 367- 372: rggai AiGhpL gatga THIK_YEAST : 89- 94: lieev AcGnvL nvgag THIK_YEAST : 281- 284: vsdgv A-Gv-L larrs THIK_YEAST : 281- 285: vsdgv A-GvlL arrsv THIK_YEAST : 329- 332: pkvle AtG--L qvqdi THIK_YEAST : 372- 377: rggai AlGhpL gctga THIL_ALCEU : 73- 75: qaaik A-G--L pamvp THIL_ALCEU : 247- 250: vtaan AsG--L ndgaa THIL_BACSU : 89- 92: lnkvc AsG--L ravtl THIL_CANTR : 76- 81: liedv AiGnvL nqaag THIL_CANTR : 363- 368: nggai AlGhpL getga THIL_CHRVI : 74- 76: qttlh A-G--L phsvp THIL_CLOAB : 59- 61: gnvlq A-G--L gqnpa THIL_CLOAB : 73- 75: qasfk A-G--L pveip THIL_CLOAB : 246- 249: vtagn AsG--L ndcaa THIL_CLODI : 64- 66: ggvlt A-G--L gqnia THIL_HAEIN : 59- 61: gnvlq A-G--L gqnpa THIL_HAEIN : 226- 229: kadtt AeG--L aklkp THIL_HAEIN : 267- 270: eskah AlG--L kaiak THIL_HAEIN : 304- 308: kalkk A-GinL ddidl THIL_HUMAN : 111- 113: qavlg A-G--L pistp THIL_MYCLE : 230- 232: saesl A-G--L kpafr THIL_MYCLE : 346- 351: nggai AvGhpL gmsga THIL_PIG : 6- 8: qavlg A-G--L pcntt THIL_RAT : 108- 110: qatlg A-G--L piatp THIL_RAT : 337- 339: kvlky A-G--L kkedi THIL_SACUV : 76- 78: qvalt A-G--L gnhiv THIL_SACUV : 351- 356: yggav AlGhpL gcsga THIL_THIVI : 74- 76: qttlm A-G--L phtvp THIL_YEAST : 75- 78: rqval AaG--L snhiv THIL_YEAST : 76- 78: qvala A-G--L snhiv THIL_YEAST : 351- 356: yggav AlGhpL gcsga THIL_ZOORA : 245- 248: vtagn AsG--L ndgaa THIM_CANTR : 76- 78: qvalk A-G--L pdsii THIM_CANTR : 189- 193: nsykk A-GkaL segkf THIM_CANTR : 308- 310: kavkh A-G--L tvdrv THIM_CANTR : 350- 355: yggav AmGhpL gcsga THIM_HUMAN : 19- 23: rtpfg AyGg-L lkdft THIM_HUMAN : 19- 24: rtpfg AyGglL kdfta THIM_HUMAN : 307- 309: galkk A-G--L slkdm THIM_HUMAN : 307- 311: galkk A-GlsL kdmdl THIM_HUMAN : 349- 354: nggai AlGhpL ggsgs THIM_RAT : 19- 23: rtpfg AyGg-L lkdft THIM_RAT : 19- 24: rtpfg AyGglL kdfta THIM_RAT : 150- 152: edtlw A-G--L tdqhv THIM_RAT : 307- 309: galkk A-G--L slkdm THIM_RAT : 307- 311: galkk A-GlsL kdmdl THIM_RAT : 349- 354: sggai AlGhpL ggsgs YKA3_CAEEL : 134- 139: anaii AgGveL lsdvp YKA3_CAEEL : 340- 342: klldk A-G--L tlkdv YKA3_CAEEL : 340- 344: klldk A-GltL kdvdv YKA3_CAEEL : 357- 361: iheaf A-GqvL anlna YKA3_CAEEL : 406- 411: ghpfg AtGvrL athsa N 14: 11.0102 90( 29) A-x(0,2)-V-x(0,1)-L Occurences: 90(29) NLTP_MOUSE : 113- 117: iqggl AncV-L algfe NLTP_MOUSE : 384- 388: rqvpg Ak-VaL qhnlg NLTP_MOUSE : 397- 402: lglgg AvvVtL yrmgf NLTP_RAT : 113- 117: vqggl AncV-L algfe NLTP_RAT : 384- 388: rqvpg Ak-VaL qhnlg NLTP_RAT : 397- 402: lglgg AavVtL yrmgf NLTP_RAT : 398- 402: glgga Av-VtL yrmgf THI1_RAT : 67- 69: dells A--V-L tavlq THI1_RAT : 71- 73: savlt A--V-L qdvkl THI1_RAT : 282- 286: qvsdg AaaV-L larrs THI1_RAT : 282- 287: qvsdg AaaVlL arrsk THI1_RAT : 283- 286: vsdga Aa-V-L larrs THI1_RAT : 283- 287: vsdga Aa-VlL arrsk THI1_RAT : 284- 286: sdgaa A--V-L larrs THI1_RAT : 284- 287: sdgaa A--VlL arrsk THI2_RAT : 77- 79: dells A--V-L tavlq THI2_RAT : 81- 83: savlt A--V-L qdvkl THI2_RAT : 292- 296: qvsdg AaaV-L larrs THI2_RAT : 292- 297: qvsdg AaaVlL arrsk THI2_RAT : 293- 296: vsdga Aa-V-L larrs THI2_RAT : 293- 297: vsdga Aa-VlL arrsk THI2_RAT : 294- 296: sdgaa A--V-L larrs THI2_RAT : 294- 297: sdgaa A--VlL arrsk THIK_CANTR : 271- 275: qvsdg AaaV-L lmkrs THIK_CANTR : 271- 276: qvsdg AaaVlL mkrsl THIK_CANTR : 272- 275: vsdga Aa-V-L lmkrs THIK_CANTR : 272- 276: vsdga Aa-VlL mkrsl THIK_CANTR : 273- 275: sdgaa A--V-L lmkrs THIK_CANTR : 273- 276: sdgaa A--VlL mkrsl THIK_ECOLI : 197- 201: tgghd AdgV-L kqfny THIK_HUMAN : 71- 73: savmt A--V-L kdvnl THIK_HUMAN : 324- 329: igpay AipVaL qkagl THIK_HUMAN : 372- 375: nplgg A--VaL ghplg THIK_PSEFR : 318- 322: afaaq AlpV-L kdlkv THIK_YARLI : 275- 279: qisdg AgaV-L lmrrs THIK_YARLI : 275- 280: qisdg AgaVlL mrrsv THIK_YARLI : 277- 279: sdgag A--V-L lmrrs THIK_YARLI : 277- 280: sdgag A--VlL mrrsv THIK_YARLI : 320- 322: ayaip A--V-L edlgl THIK_YEAST : 281- 284: vsdgv Ag-V-L larrs THIK_YEAST : 281- 285: vsdgv Ag-VlL arrsv THIL_ALCEU : 94- 97: gsglk A--VmL aanai THIL_ALCEU : 121- 125: enmsa AphV-L pgsrd THIL_BACSU : 94- 97: asglr A--VtL cdqmi THIL_BACSU : 256- 259: ndgag Af-V-L mseek THIL_BACSU : 321- 325: vneaf AsvV-L tceki THIL_BACSU : 321- 325: vneaf As-VvL tceki THIL_BACSU : 387- 389: aaqgd A--V-L vqvh THIL_CANTR : 271- 275: qvsdg AaaV-L lmkrs THIL_CANTR : 271- 276: qvsdg AaaVlL mkrsl THIL_CANTR : 272- 275: vsdga Aa-V-L lmkrs THIL_CANTR : 272- 276: vsdga Aa-VlL mkrsl THIL_CANTR : 273- 275: sdgaa A--V-L lmkrs THIL_CANTR : 273- 276: sdgaa A--VlL mkrsl THIL_CHRVI : 33- 35: teigt A--V-L kglla THIL_CHRVI : 95- 98: gsglk A--VhL amqai THIL_CHRVI : 357- 360: igasg Ar-V-L vtlly THIL_CLOAB : 26- 29: lkdvp A--VdL gatai THIL_CLOAB : 253- 256: glndc Aa-V-L vimsa THIL_CLOAB : 254- 256: lndca A--V-L vimsa THIL_CLODI : 31- 34: fksvs A--VeL gvtaa THIL_HAEIN : 26- 29: lssvs A--VdL gaivi THIL_HAEIN : 190- 193: tlasq A--VqL gvfdk THIL_HUMAN : 2- 4: m A--V-L aallr THIL_HUMAN : 107- 109: aptrq A--V-L gaglp THIL_HUMAN : 291- 295: lndga AalV-L mtada THIL_HUMAN : 292- 295: ndgaa Al-V-L mtada THIL_HUMAN : 333- 337: apvya AsmV-L kdvgl THIL_HUMAN : 380- 383: ningg A--VsL ghpig THIL_MYCLE : 321- 325: ineaf Aa-VaL asare THIL_MYCLE : 322- 325: neafa A--VaL asare THIL_PIG : 2- 4: q A--V-L gaglp THIL_RAT : 3- 7: ma AlaV-L hgvvr THIL_RAT : 5- 7: maal A--V-L hgvvr THIL_RAT : 287- 292: tlndg AaaVvL mtaea THIL_RAT : 288- 292: lndga AavV-L mtaea THIL_RAT : 288- 292: lndga Aa-VvL mtaea THIL_RAT : 289- 292: ndgaa Av-V-L mtaea THIL_RAT : 289- 292: ndgaa A--VvL mtaea THIL_RAT : 377- 380: nvhgg A--VsL ghpig THIL_RAT : 416- 420: ngggg AsaV-L iekl THIL_RAT : 418- 420: gggas A--V-L iekl THIL_SACUV : 27- 30: lsskt A--VeL gaaal THIL_SACUV : 69- 74: lgqap ArqVaL taglg THIL_SACUV : 349- 352: nvygg A--VaL ghplg THIL_THIVI : 95- 98: gsglk A--VhL amqav THIL_THIVI : 357- 360: igasg Ar-V-L vtlly THIL_YEAST : 27- 30: lsskt A--VeL gaval THIL_YEAST : 32- 35: avelg A--VaL kgala THIL_YEAST : 69- 74: lgqap ArqVaL aagls THIL_YEAST : 258- 263: pindg AaaViL vsekv THIL_YEAST : 259- 263: indga Aa-ViL vsekv THIL_YEAST : 260- 263: ndgaa A--ViL vsekv THIL_YEAST : 349- 352: nvygg A--VaL ghplg THIL_ZOORA : 36- 38: atvis A--V-L eragv THIL_ZOORA : 94- 97: gsglr A--VaL gmqqi THIM_CANTR : 69- 74: vgqap ArqVaL kaglp THIM_CANTR : 259- 263: lndgg AalV-L vseak THIM_CANTR : 260- 263: ndgga Al-V-L vseak THIM_HUMAN : 70- 75: daiyl ArhVgL rvgip THIM_HUMAN : 111- 115: icvke AevV-L cggte THIM_HUMAN : 111- 115: icvke Ae-VvL cggte THIM_RAT : 70- 75: daayl ArhVgL rvgvp THIM_RAT : 111- 115: icskd AevV-L cggte THIM_RAT : 111- 115: icskd Ae-VvL cggte YKA3_CAEEL : 48- 51: fkdlm A--VdL qkeai YKA3_CAEEL : 103- 108: pdkip AhtVtL aciss YKA3_CAEEL : 134- 139: anaii AggVeL lsdvp YKA3_CAEEL : 357- 361: iheaf AgqV-L anlna YKA3_CAEEL : 406- 411: ghpfg AtgVrL athsa O 15: 11.0102 77( 29) A-x(0,1)-L-x(0,2)-G Occurences: 77(29) NLTP_MOUSE : 118- 120: ancvl A-L--G fekme NLTP_MOUSE : 318- 320: litye A-L--G lcpeg NLTP_MOUSE : 506- 510: dsdll A-LmtG kmnpq NLTP_RAT : 118- 120: ancvl A-L--G fekme NLTP_RAT : 318- 320: lltye A-L--G lcpeg NLTP_RAT : 506- 510: dsdll A-LmtG kmnpq THI1_RAT : 374- 376: lggai A-L--G hplgc THI2_RAT : 384- 386: lggai A-L--G hplgc THIK_CANTR : 93- 98: tehrg AcLaaG ipyta THIK_CANTR : 363- 365: nggai A-L--G hplge THIK_ECOLI : 112- 116: tgdaq AcLv-G gvehm THIK_ECOLI : 112- 117: tgdaq AcLvgG vehmg THIK_ECOLI : 240- 244: agtss A-LsdG aaaml THIK_ECOLI : 340- 342: nggai A-L--G hplgc THIK_HUMAN : 374- 376: lggav A-L--G hplgc THIK_PSEFR : 343- 345: hggai A-L--G hpfgc THIK_YARLI : 58- 63: ssell AsLleG lvkes THIK_YARLI : 96- 101: tehra AcLvaG ipetv THIK_YEAST : 106- 111: tehra AcLasG ipyst THIK_YEAST : 149- 151: idigl A-L--G vesmt THIK_YEAST : 372- 374: rggai A-L--G hplgc THIL_ALCEU : 376- 381: akkgl AsLciG ggmgv THIL_BACSU : 27- 30: kevka AeL--G givmk THIL_BACSU : 27- 31: kevka AeLg-G ivmke THIL_BACSU : 70- 74: psrla ArLa-G mpwsv THIL_BACSU : 266- 269: seeka AeL--G krpla THIL_BACSU : 346- 348: nggai A-L--G hpiga THIL_CANTR : 93- 98: tehrg AcLaaG ipyta THIL_CANTR : 363- 365: nggai A-L--G hplge THIL_CHRVI : 33- 37: teigt AvLk-G llart THIL_CHRVI : 377- 382: akkgl AtLciG ggqgv THIL_CLOAB : 59- 62: gnvlq AgL--G qnpar THIL_CLOAB : 345- 347: nggai A-L--G hpiga THIL_CLOAB : 375- 380: akkgl AtLciG ggqgt THIL_CLODI : 64- 67: ggvlt AgL--G qniar THIL_CLODI : 75- 77: iarqi A-L--G agipv THIL_CLODI : 75- 79: iarqi A-LgaG ipvek THIL_HAEIN : 59- 62: gnvlq AgL--G qnpar THIL_HAEIN : 69- 74: nparq AaLkaG iekei THIL_HAEIN : 70- 74: parqa A-LkaG iekei THIL_HAEIN : 96- 98: glksv A-L--G aqsii THIL_HAEIN : 267- 269: eskah A-L--G lkaia THIL_HAEIN : 346- 348: hggai A-L--G hpiga THIL_HAEIN : 376- 381: kklgl AtLciG ggqgi THIL_HUMAN : 6- 11: mavla AlLrsG arsrs THIL_HUMAN : 107- 110: aptrq AvL--G aglpi THIL_HUMAN : 107- 112: aptrq AvLgaG lpist THIL_HUMAN : 401- 405: ghlth A-LkqG eygla THIL_MYCLE : 376- 380: sgygv AaLc-G aggqg THIL_MYCLE : 377- 380: gygva A-Lc-G aggqg THIL_PIG : 2- 5: q AvL--G aglpc THIL_PIG : 2- 7: q AvLgaG lpcnt THIL_RAT : 5- 9: maal AvLh-G vvrrp THIL_RAT : 104- 107: aptrq AtL--G aglpi THIL_RAT : 104- 109: aptrq AtLgaG lpiat THIL_RAT : 398- 402: vhlah A-LkqG efgla THIL_SACUV : 33- 37: velga AaLk-G alakv THIL_SACUV : 34- 37: elgaa A-Lk-G alakv THIL_SACUV : 62- 65: gnvls AnL--G qapar THIL_SACUV : 73- 77: parqv A-LtaG lgnhi THIL_SACUV : 76- 79: qvalt AgL--G nhiva THIL_SACUV : 351- 353: yggav A-L--G hplgc THIL_THIVI : 377- 382: akkgl AtLciG ggqgv THIL_YEAST : 34- 37: elgav A-Lk-G alakv THIL_YEAST : 62- 65: gnvls AnL--G qapar THIL_YEAST : 73- 77: parqv A-LaaG lsnhi THIL_YEAST : 351- 353: yggav A-L--G hplgc THIL_ZOORA : 96- 98: glrav A-L--G mqqia THIL_ZOORA : 125- 129: maphc AhLa-G gvkmg THIL_ZOORA : 125- 130: maphc AhLagG vkmgd THIL_ZOORA : 374- 379: arkgl AtLciG ggmgv THIM_CANTR : 73- 77: parqv A-LkaG lpdsi THIM_CANTR : 192- 196: kkagk A-LseG kfkse THIM_HUMAN : 39- 44: efaak AaLsaG kvspe THIM_HUMAN : 40- 44: faaka A-LsaG kvspe THIM_HUMAN : 349- 351: nggai A-L--G hplgg THIM_RAT : 2- 6: m AlLr-G vfiva THIM_RAT : 2- 6: m A-LlrG vfiva THIM_RAT : 39- 44: efaar AaLsaG kvppe THIM_RAT : 40- 44: faara A-LsaG kvppe THIM_RAT : 349- 351: sggai A-L--G hplgg YKA3_CAEEL : 91- 96: niare AaLlaG vpdki YKA3_CAEEL : 92- 96: iarea AlLa-G vpdki YKA3_CAEEL : 92- 96: iarea A-LlaG vpdki YKA3_CAEEL : 154- 157: rnark AmL--G mnkak YKA3_CAEEL : 300- 304: mteey A-LanG ykpka P 16: 11.0102 109( 29) A-x(0,1)-L-x(0,2)-A Occurences: 109(29) NLTP_MOUSE : 46- 50: eagqk A-LedA qipys NLTP_MOUSE : 100- 104: stgst A-LfmA hqliq NLTP_RAT : 46- 48: eagqk A-L--A drqip NLTP_RAT : 100- 104: stgst A-LfmA qqlvq THI1_RAT : 20- 23: sesss A-Lq-A apcsa THI1_RAT : 20- 24: sesss A-LqaA pcsag THI1_RAT : 67- 71: dells AvLt-A vlqdv THI1_RAT : 203- 205: kqdaf A-L--A sqqka THI1_RAT : 258- 263: tmegl AkLkpA fkdgg THI1_RAT : 284- 288: sdgaa AvLl-A rrska THI1_RAT : 327- 332: ayaip AaLqkA gltvn THI1_RAT : 328- 332: yaipa A-LqkA gltvn THI2_RAT : 30- 33: pesss A-Lq-A apcsa THI2_RAT : 30- 34: pesss A-LqaA pcsat THI2_RAT : 77- 81: dells AvLt-A vlqdv THI2_RAT : 213- 215: kqdaf A-L--A sqqka THI2_RAT : 268- 273: tmegl AkLkpA fkdgg THI2_RAT : 294- 298: sdgaa AvLl-A rrska THI2_RAT : 337- 342: ayaip AaLqkA gltvn THI2_RAT : 338- 342: yaipa A-LqkA gltvn THIK_CANTR : 93- 96: tehrg AcL--A agipy THIK_CANTR : 93- 97: tehrg AcLa-A gipyt THIK_ECOLI : 44- 47: larnp A-Le-A aaldd THIK_ECOLI : 44- 48: larnp A-LeaA alddi THIK_ECOLI : 72- 76: niarn AaLl-A evphs THIK_ECOLI : 73- 76: iarna AlL--A evphs THIK_ECOLI : 73- 76: iarna A-Ll-A evphs THIK_ECOLI : 97- 101: gssmq A-LhdA armim THIK_ECOLI : 218- 220: ettve A-L--A tlrpa THIK_ECOLI : 220- 225: tveal AtLrpA fdpvn THIK_ECOLI : 291- 295: paskl A-LkkA glsas THIK_ECOLI : 295- 299: lalkk AgLs-A sdigv THIK_HUMAN : 203- 205: kqdtf A-L--A sqqka THIK_HUMAN : 258- 263: tmegl AkLkpA fkkdg THIK_HUMAN : 284- 288: sdgaa AiLl-A rrska THIK_HUMAN : 328- 332: yaipv A-LqkA gltvs THIK_PSEFR : 100- 104: gssms A-LhtA aqaim THIK_PSEFR : 223- 228: tlesl AaLkpA fnpkg THIK_PSEFR : 224- 228: lesla A-LkpA fnpkg THIK_PSEFR : 294- 298: patqk A-LkrA glnma THIK_PSEFR : 298- 303: kalkr AgLnmA didfi THIK_YARLI : 96- 100: tehra AcLv-A gipet THIK_YARLI : 408- 413: tgmga AsLvvA e THIK_YEAST : 106- 109: tehra AcL--A sgipy THIL_ALCEU : 36- 41: avvik AaLerA gvkpe THIL_ALCEU : 37- 41: vvika A-LerA gvkpe THIL_ALCEU : 73- 77: qaaik AgLp-A mvpam THIL_ALCEU : 300- 304: paskr A-LsrA ewtpq THIL_ALCEU : 324- 326: afaaq A-L--A vhqqm THIL_ALCEU : 387- 389: ggmgv A-L--A verk THIL_BACSU : 37- 41: ivmke A-LqqA gvsgd THIL_BACSU : 70- 73: psrla ArL--A gmpws THIL_BACSU : 230- 233: sldql AkL--A piyas THIL_CANTR : 93- 96: tehrg AcL--A agipy THIL_CANTR : 93- 97: tehrg AcLa-A gipyt THIL_CHRVI : 275- 279: glkpm ArLv-A fasag THIL_CHRVI : 388- 390: ggqgv A-L--A verm THIL_CLOAB : 179- 181: eqdef A-L--A sqkka THIL_CLOAB : 229- 234: tiegl AkLkpA fkkdg THIL_CLODI : 75- 78: iarqi A-Lg-A gipve THIL_HAEIN : 69- 73: nparq AaLk-A gieke THIL_HAEIN : 70- 73: parqa A-Lk-A gieke THIL_HAEIN : 96- 99: glksv A-Lg-A qsiis THIL_HAEIN : 230- 235: taegl AkLkpA fkkeg THIL_HAEIN : 300- 304: patqk A-LkkA ginld THIL_HUMAN : 2- 5: m AvL--A allrs THIL_HUMAN : 2- 6: m AvLa-A llrsg THIL_HUMAN : 107- 111: aptrq AvLg-A glpis THIL_MYCLE : 36- 41: aitia AaLkkA nvaps THIL_MYCLE : 37- 41: itiaa A-LkkA nvaps THIL_MYCLE : 96- 98: gldai A-L--A dqlir THIL_MYCLE : 230- 235: saesl AgLkpA frcgg THIL_MYCLE : 324- 326: afaav A-L--A sarel THIL_MYCLE : 324- 328: afaav A-LasA relgi THIL_MYCLE : 363- 367: itlhv A-LelA rrgsg THIL_MYCLE : 376- 381: sgygv AaLcgA ggqgd THIL_MYCLE : 377- 381: gygva A-LcgA ggqgd THIL_PIG : 2- 6: q AvLg-A glpcn THIL_RAT : 2- 5: m AaL--A vlhgv THIL_RAT : 3- 5: ma A-L--A vlhgv THIL_RAT : 104- 108: aptrq AtLg-A glpia THIL_RAT : 108- 113: qatlg AgLpiA tpctt THIL_SACUV : 33- 38: velga AaLkgA lakvp THIL_SACUV : 34- 38: elgaa A-LkgA lakvp THIL_SACUV : 38- 40: aalkg A-L--A kvpel THIL_SACUV : 62- 67: gnvls AnLgqA parqv THIL_SACUV : 73- 76: parqv A-Lt-A glgnh THIL_SACUV : 287- 291: gwgea AhLp-A dftwa THIL_SACUV : 304- 308: lavpk A-LkhA giedi THIL_THIVI : 21- 24: gtfgg A-Ls-A lqatd THIL_THIVI : 24- 27: ggals A-Lq-A tdigt THIL_THIVI : 275- 279: gltpm ArLv-A fssag THIL_THIVI : 388- 390: ggqgv A-L--A verl THIL_YEAST : 34- 38: elgav A-LkgA lakvp THIL_YEAST : 38- 40: valkg A-L--A kvpel THIL_YEAST : 62- 67: gnvls AnLgqA parqv THIL_YEAST : 73- 75: parqv A-L--A aglsn THIL_YEAST : 73- 76: parqv A-La-A glsnh THIL_YEAST : 304- 308: lavpk A-LkhA giedi THIL_ZOORA : 36- 41: atvis AvLerA gvaag THIL_ZOORA : 125- 128: maphc AhL--A ggvkm THIL_ZOORA : 228- 233: tldsm AkLrpA fdkeg THIL_ZOORA : 298- 302: pasrk A-LerA gwkig THIM_CANTR : 38- 41: ahavk AaL--A kvpqi THIM_CANTR : 39- 41: havka A-L--A kvpqi THIM_CANTR : 73- 76: parqv A-Lk-A glpds THIM_CANTR : 298- 300: ftiap A-L--A vpkav THIM_HUMAN : 39- 43: efaak AaLs-A gkvsp THIM_HUMAN : 40- 43: faaka A-Ls-A gkvsp THIM_HUMAN : 303- 307: paisg A-LkkA glslk THIM_RAT : 39- 43: efaar AaLs-A gkvpp THIM_RAT : 40- 43: faara A-Ls-A gkvpp THIM_RAT : 67- 70: sssda AyL--A rhvgl THIM_RAT : 303- 307: paitg A-LkkA glslk YKA3_CAEEL : 91- 95: niare AaLl-A gvpdk YKA3_CAEEL : 92- 95: iarea AlL--A gvpdk YKA3_CAEEL : 92- 95: iarea A-Ll-A gvpdk YKA3_CAEEL : 300- 302: mteey A-L--A ngykp YKA3_CAEEL : 362- 366: agqvl AnLn-A mdsdy Q 17: 10.5102 77( 29) A-x(0,2)-S-x(0,2)-G Occurences: 77(29) NLTP_MOUSE : 422- 428: hqvsa AptSsaG dgfka NLTP_RAT : 422- 428: hqisa AptSsaG dgfka THI1_RAT : 24- 29: salqa ApcSa-G fpqas THI1_RAT : 213- 217: qkaas Aq-Sk-G cfrae THI2_RAT : 223- 227: qkaas Aq-Sk-G cfrae THIK_CANTR : 245- 249: regvt Ae-Sl-G klrpa THIK_ECOLI : 240- 244: agtss Al-Sd-G aaaml THIK_ECOLI : 299- 303: kagls A--SdiG vfemn THIK_HUMAN : 15- 18: hlrgp Ad-S--G wmpqa THIK_HUMAN : 129- 135: ssglq AvaSiaG girng THIK_HUMAN : 131- 135: glqav A--SiaG girng THIK_HUMAN : 213- 217: qkaar Aq-Sk-G cfqae THIK_PSEFR : 144- 148: mslya AkaS--G mmglt THIK_PSEFR : 146- 148: lyaak A--S--G mmglt THIK_PSEFR : 353- 357: fgcsg AriS--G tllnv THIK_YARLI : 256- 261: gklkp Af-SaeG tthag THIK_YEAST : 41- 47: vviva AnrSaiG kgfkg THIK_YEAST : 109- 111: raacl A--S--G ipyst THIL_ALCEU : 59- 62: gqvlt Ag-S--G qnpar THIL_ALCEU : 245- 249: gtvta AnaS--G lndga THIL_ALCEU : 247- 249: vtaan A--S--G lndga THIL_ALCEU : 353- 355: ghpig A--S--G crilv THIL_BACSU : 41- 45: ealqq AgvS--G ddveg THIL_BACSU : 59- 62: gmvvq Ag-S--G qipsr THIL_BACSU : 89- 91: lnkvc A--S--G lravt THIL_BACSU : 237- 240: lapiy A--Sd-G sitag THIL_BACSU : 353- 355: ghpig A--S--G arilm THIL_BACSU : 377- 381: glgva AicS--G aaqgd THIL_CANTR : 204- 208: nkaak AvaS--G afkse THIL_CANTR : 206- 208: aakav A--S--G afkse THIL_CANTR : 245- 249: regvt Ae-Sl-G klrpa THIL_CHRVI : 10- 16: ivivd AgrSaiG tfggs THIL_CHRVI : 227- 231: rhgtt Ae-Sl-G klrpa THIL_CHRVI : 236- 241: gklrp Af-SkdG svtag THIL_CHRVI : 248- 250: vtagn A--S--G indga THIL_CHRVI : 279- 284: marlv AfaSa-G vdpai THIL_CHRVI : 281- 284: rlvaf A--Sa-G vdpai THIL_CHRVI : 354- 356: ghpig A--S--G arvlv THIL_CLOAB : 13- 18: savrt AigSy-G kslkd THIL_CLOAB : 189- 193: kkaee AikS--G qfkde THIL_CLOAB : 246- 248: vtagn A--S--G lndca THIL_CLOAB : 352- 354: ghpig A--S--G arilv THIL_CLODI : 18- 23: saart AvgSf-G gafks THIL_CLODI : 18- 24: saart AvgSfgG afksv THIL_HAEIN : 247- 249: vtagn A--S--G indga THIL_HAEIN : 280- 282: kirsy A--S--G gvdps THIL_HAEIN : 280- 283: kirsy A--Sg-G vdpsv THIL_HAEIN : 353- 355: ghpig A--S--G arilv THIL_HUMAN : 127- 129: inkvc A--S--G mkaim THIL_HUMAN : 380- 384: ningg Av-Sl-G hpigm THIL_MYCLE : 26- 30: lkdfs A--SdlG aitia THIL_MYCLE : 226- 231: rants Ae-SlaG lkpaf THIL_PIG : 22- 24: iikvc A--S--G mk THIL_RAT : 124- 126: vnkvc A--S--G mkaim THIL_RAT : 377- 381: nvhgg Av-Sl-G hpigm THIL_SACUV : 324- 329: fefne Af-SvvG lvntk THIL_THIVI : 190- 194: qkaea AiqS--G rfade THIL_THIVI : 248- 250: vtagn A--S--G indga THIL_THIVI : 279- 284: marlv AfsSa-G vdpai THIL_THIVI : 279- 284: marlv Af-SsaG vdpai THIL_THIVI : 354- 356: ghpig A--S--G arvlv THIL_YEAST : 324- 329: fefne Af-SvvG lvntk THIL_ZOORA : 13- 19: asart AvgSfnG afant THIL_ZOORA : 245- 247: vtagn A--S--G lndga THIL_ZOORA : 261- 267: llmse AeaSrrG iqplg THIL_ZOORA : 263- 267: mseae A--SrrG iqplg THIL_ZOORA : 351- 353: ghpig A--S--G ariln THIM_CANTR : 92- 94: inkvc A--S--G mkavi THIM_CANTR : 131- 134: yylps Ar-S--G arygd THIM_CANTR : 192- 196: kkagk Al-Se-G kfkse THIM_CANTR : 278- 282: glkpl AkiS--G wgeaa THIM_CANTR : 278- 284: glkpl AkiSgwG eaart THIM_CANTR : 323- 328: felne Af-SvvG lanae THIM_HUMAN : 39- 44: efaak AalSa-G kvspe THIM_HUMAN : 40- 44: faaka Al-Sa-G kvspe THIM_HUMAN : 250- 252: vtagn A--S--G vadga THIM_HUMAN : 299- 302: igpvp Ai-S--G alkka THIM_RAT : 39- 44: efaar AalSa-G kvppe THIM_RAT : 40- 44: faara Al-Sa-G kvppe THIM_RAT : 250- 252: vtagn A--S--G msdga YKA3_CAEEL : 187- 192: elpav AefSt-G etmgh R 18: 10.5102 92( 29) V-x(1,3)-A-x(1,3)-G Occurences: 92(29) NLTP_MOUSE : 57- 63: ipysa Veq-Acv-G yvygd NLTP_MOUSE : 116- 120: glanc Vl--Al--G fekme NLTP_MOUSE : 178- 185: kygtk VehfAki-G wknhk NLTP_RAT : 57- 63: ipysa Veq-Acv-G yvyge NLTP_RAT : 116- 120: glanc Vl--Al--G fekme NLTP_RAT : 178- 185: tygtk VehfAki-G wknhk THI1_RAT : 130- 136: sglqa VaniAg--G irngs THI2_RAT : 140- 146: sglqa VaniAg--G irngs THIK_CANTR : 80- 86: vaign VlnqAa--G atehr THIK_CANTR : 243- 249: gpreg Vt--AeslG klrpa THIK_ECOLI : 140- 145: glsrn Vak-Aa--G mmglt THIK_ECOLI : 140- 148: glsrn VakaAgmmG ltaem THIK_ECOLI : 267- 274: kprar VrsmAvv-G cdpsi THIK_HUMAN : 130- 136: sglqa VasiAg--G irngs THIK_PSEFR : 278- 284: mavag Vdp-Aim-G ygpvp THIK_YARLI : 83- 87: vvcgn Vl--Aa--G agate THIK_YARLI : 83- 89: vvcgn Vla-Aga-G atehr THIK_YARLI : 83- 89: vvcgn Vl--AagaG atehr THIK_YARLI : 245- 251: girpg Vt--AeklG klkpa THIK_YEAST : 13- 18: ikdhl Ves-Am--G kgesk THIK_YEAST : 13- 20: ikdhl Ves-AmgkG eskrk THIK_YEAST : 326- 331: yaipk Vle-At--G lqvqd THIL_ALCEU : 56- 62: vimgq Vlt-Ags-G qnpar THIL_ALCEU : 110- 114: gdaei Vv--Ag--G qenms THIL_ALCEU : 242- 249: dkagt Vta-AnasG lndga THIL_ALCEU : 340- 348: tskvn VnggAiaiG hpiga THIL_BACSU : 24- 30: gvlke Vka-Ael-G givmk THIL_BACSU : 24- 30: gvlke Vk--AaelG givmk THIL_BACSU : 24- 31: gvlke Vka-AelgG ivmke THIL_BACSU : 56- 62: nvmgm Vvq-Ags-G qipsr THIL_BACSU : 57- 62: vmgmv Vq--Ags-G qipsr THIL_BACSU : 87- 91: etlnk Vc--As--G lravt THIL_BACSU : 125- 131: nipya Vp--AgrwG armgd THIL_BACSU : 155- 161: cafde Vhm-Avh-G ntaak THIL_BACSU : 340- 348: lekvn VnggAialG hpiga THIL_BACSU : 375- 381: ggglg Va--AicsG aaqgd THIL_CANTR : 80- 86: vaign VlnqAa--G atehr THIL_CANTR : 243- 249: gpreg Vt--AeslG klrpa THIL_CHRVI : 57- 63: vilgq Vlt-Agv-G qnpar THIL_CHRVI : 111- 115: gdadi Vi--Ag--G qesms THIL_CHRVI : 278- 284: pmarl Vaf-Asa-G vdpai THIL_CHRVI : 285- 291: fasag Vdp-Aim-G tgpip THIL_CHRVI : 341- 349: lskvn VnggAiaiG hpiga THIL_CLOAB : 10- 15: viasa Vrt-Ai--G sygks THIL_CLOAB : 24- 30: kslkd Vp--AvdlG ataik THIL_CLOAB : 56- 62: vilgn Vlq-Agl-G qnpar THIL_CLOAB : 109- 114: agdad Vii-Ag--G menms THIL_CLOAB : 283- 289: ygsag Vdp-Aim-G ygpfy THIL_CLOAB : 339- 347: mnkvn VnggAialG hpiga THIL_CLODI : 29- 35: gafks Vs--AvelG vtaak THIL_CLODI : 61- 67: sllgg Vlt-Agl-G qniar THIL_HAEIN : 24- 30: galss Vs--AvdlG aiviq THIL_HAEIN : 56- 62: vimgn Vlq-Agl-G qnpar THIL_HUMAN : 86- 92: ipkee Vke-Aym-G nvlqg THIL_HUMAN : 125- 129: ttink Vc--As--G mkaim THIL_HUMAN : 147- 152: cghqd Vmv-Ag--G mesms THIL_MYCLE : 56- 62: viigq Vlt-Aga-G qmpar THIL_MYCLE : 71- 76: arqaa Va--Agi-G wdvpa THIL_MYCLE : 109- 114: agefd Vvv-Ag--G qesmt THIL_MYCLE : 110- 114: gefdv Vv--Ag--G qesmt THIL_MYCLE : 140- 147: gdvti VdhlAyd-G lhdvf THIL_MYCLE : 274- 280: gltwl VeigAh--G vvagp THIL_MYCLE : 340- 348: pelvn VnggAiavG hplgm THIL_MYCLE : 375- 380: gsgyg Va--Alc-G aggqg THIL_PIG : 20- 24: spiik Vc--As--G mk THIL_RAT : 122- 126: ttvnk Vc--As--G mkaim THIL_RAT : 144- 149: cghqd Vmv-Ag--G mesms THIL_RAT : 373- 381: pqkvn VhggAvslG hpigm THIL_SACUV : 59- 65: iifgn Vls-Anl-G qapar THIL_SACUV : 72- 79: aparq ValtAgl-G nhiva THIL_SACUV : 112- 117: cgnad Vvv-Ag--G cesmt THIL_SACUV : 113- 117: gnadv Vv--Ag--G cesmt THIL_SACUV : 345- 353: pskvn VyggAvalG hplgc THIL_SACUV : 380- 386: ggkig Va--AicnG gggas THIL_THIVI : 57- 63: vilgq Vlt-Agc-G qnpar THIL_THIVI : 111- 115: gdaei Vi--Ag--G qesms THIL_THIVI : 285- 291: fssag Vdp-Aim-G tgpip THIL_THIVI : 341- 349: lskvn VnggAiaiG hpiga THIL_YEAST : 59- 65: iifgn Vls-Anl-G qapar THIL_YEAST : 72- 77: aparq Val-Aa--G lsnhi THIL_YEAST : 112- 117: cgnad Vvv-Ag--G cesmt THIL_YEAST : 113- 117: gnadv Vv--Ag--G cesmt THIL_YEAST : 345- 353: pskvn VyggAvalG hplgc THIL_YEAST : 380- 386: ggkig Va--AicnG gggas THIL_ZOORA : 56- 62: vilgq Vlp-Age-G qnpar THIL_ZOORA : 75- 83: amkag VpqeAtawG mnqlc THIL_ZOORA : 275- 281: plgri Vsw-Atv-G vdpkv THIL_ZOORA : 338- 346: psivn VnggAiaiG hpiga THIM_CANTR : 59- 65: ivfgg Vlq-Anv-G qapar THIM_CANTR : 90- 94: stink Vc--As--G mkavi THIM_CANTR : 344- 352: lekln VyggAvamG hplgc THIM_HUMAN : 297- 302: mgigp Vp--Ais-G alkka THIM_HUMAN : 343- 351: isktn VnggAialG hplgg THIM_HUMAN : 378- 384: ggkya Vgs-Aci-G ggqgi THIM_HUMAN : 378- 385: ggkya Vgs-AcigG gqgia THIM_RAT : 297- 302: mgigp Vp--Ait-G alkka THIM_RAT : 343- 351: psktn VsggAialG hplgg THIM_RAT : 378- 384: ggkya Vgs-Aci-G ggqgi THIM_RAT : 378- 385: ggkya Vgs-AcigG gqgis YKA3_CAEEL : 428- 435: kgqya Via-AcaaG ghgvg S 19: 10.5102 61( 29) V-x(0,2)-L-x(1,3)-G Occurences: 61(29) NLTP_MOUSE : 116- 120: glanc V--Lal-G fekme NLTP_MOUSE : 399- 406: lggav VvtLyrmG fpeaa NLTP_MOUSE : 400- 406: ggavv Vt-LyrmG fpeaa NLTP_RAT : 116- 120: glanc V--Lal-G fekme NLTP_RAT : 399- 406: lggaa VvtLyrmG fpeaa NLTP_RAT : 400- 406: ggaav Vt-LyrmG fpeaa THI1_RAT : 91- 95: isvgn V--Lqp-G agaam THI1_RAT : 230- 235: pvttt V--LddkG drkti THI1_RAT : 366- 371: ipaek VnpLg--G aialg THI2_RAT : 101- 105: isvgn V--Lep-G agavm THI2_RAT : 240- 245: pvttt V--LddkG drkti THI2_RAT : 376- 381: ipaek VnpLg--G aialg THIK_CANTR : 317- 322: yaipe V--LkrtG ltvdd THIK_ECOLI : 87- 92: vpavt VnrLc--G ssmqa THIK_HUMAN : 91- 95: icvgn V--Lqp-G agaim THIK_HUMAN : 327- 333: ayaip Va-LqkaG ltvsd THIK_HUMAN : 366- 371: lppek VnpLg--G avalg THIK_PSEFR : 90- 95: saaqt VsrLc--G ssmsa THIK_PSEFR : 335- 339: kmnek Vn-Lh--G gaial THIK_PSEFR : 335- 340: kmnek Vn-Lhg-G aialg THIK_YARLI : 83- 87: vvcgn V--Laa-G agate THIK_YARLI : 321- 326: yaipa V--LedlG ltvnd THIK_YEAST : 93- 97: vacgn V--Lnv-G agate THIK_YEAST : 326- 331: yaipk V--LeatG lqvqd THIL_ALCEU : 56- 60: vimgq V--Lta-G sgqnp THIL_ALCEU : 124- 127: saaph V--Lp--G srdgf THIL_BACSU : 363- 370: ilmtl VyeLkrrG gglgv THIL_CANTR : 317- 322: faipe V--LkrtG ltvdd THIL_CHRVI : 34- 37: eigta V--Lk--G llart THIL_CHRVI : 57- 61: vilgq V--Lta-G vgqnp THIL_CLOAB : 56- 60: vilgn V--Lqa-G lgqnp THIL_CLODI : 61- 65: sllgg V--Lta-G lgqni THIL_HAEIN : 56- 60: vimgn V--Lqa-G lgqnp THIL_HUMAN : 94- 97: aymgn V--Lq--G gegqa THIL_HUMAN : 94- 98: aymgn V--Lqg-G egqap THIL_HUMAN : 108- 112: ptrqa V--Lga-G lpist THIL_HUMAN : 336- 341: yaasm V--LkdvG lkked THIL_MYCLE : 56- 60: viigq V--Lta-G agqmp THIL_MYCLE : 140- 147: gdvti VdhLaydG lhdvf THIL_MYCLE : 375- 380: gsgyg VaaLc--G aggqg THIL_MYCLE : 375- 382: gsgyg VaaLcgaG gqgda THIL_PIG : 3- 7: qa V--Lga-G lpcnt THIL_RAT : 6- 9: maala V--Lh--G vvrrp THIL_RAT : 333- 338: yavpk V--LkyaG lkked THIL_SACUV : 72- 77: aparq Va-Lta-G lgnhi THIL_SACUV : 141- 145: kfgqt V--Lid-G verdg THIL_THIVI : 57- 61: vilgq V--Lta-G cgqnp THIL_YEAST : 33- 37: velga Va-Lk--G alakv THIL_YEAST : 72- 77: aparq Va-Laa-G lsnhi THIL_YEAST : 141- 145: kfgqt V--Lvd-G verdg THIL_ZOORA : 37- 42: tvisa V--LeraG vaage THIL_ZOORA : 56- 60: vilgq V--Lpa-G egqnp THIM_CANTR : 72- 77: aparq Va-Lka-G lpdsi THIM_CANTR : 369- 374: vtlls V--LtqeG grfga THIM_HUMAN : 73- 78: ylarh Vg-Lrv-G ipket THIM_HUMAN : 113- 117: vkeae Vv-Lc--G gtesm THIM_HUMAN : 113- 118: vkeae Vv-Lcg-G tesms THIM_HUMAN : 114- 117: keaev V--Lc--G gtesm THIM_HUMAN : 114- 118: keaev V--Lcg-G tesms THIM_HUMAN : 366- 373: itahl VheLrrrG gkyav THIM_RAT : 73- 78: ylarh Vg-Lrv-G vptet THIM_RAT : 113- 117: skdae Vv-Lc--G gtesm THIM_RAT : 113- 118: skdae Vv-Lcg-G tesms THIM_RAT : 114- 117: kdaev V--Lc--G gtesm THIM_RAT : 114- 118: kdaev V--Lcg-G tesms THIM_RAT : 157- 162: ltdqh Vk-Lpm-G mtaen THIM_RAT : 366- 373: itahl VheLrrrG gkyav YKA3_CAEEL : 239- 243: tdvvp Vf-Ld--G kkpkt T 20: 8.3401 87( 29) S-G Occurences: 87(29) NLTP_MOUSE : 71- 72: ygdst SG qraiy NLTP_MOUSE : 292- 293: rcyek SG ltpnd NLTP_MOUSE : 347- 348: wvinp SG glisk NLTP_RAT : 292- 293: kcyek SG lgpsd NLTP_RAT : 347- 348: wvinp SG glisk THI1_RAT : 108- 109: iaqfl SG ipetv THI1_RAT : 125- 126: nrqcs SG lqava THI2_RAT : 118- 119: iaqfl SG ipetv THI2_RAT : 135- 136: nrqcs SG lqava THIK_CANTR : 8- 9: rlnql SG qlkpn THIK_CANTR : 114- 115: nrfcs SG lmais THIK_CANTR : 397- 398: smcig SG mgsas THIK_ECOLI : 348- 349: hplgc SG arist THIK_HUMAN : 17- 18: rgpad SG wmpqa THIK_HUMAN : 28- 29: aapcl SG apqas THIK_HUMAN : 125- 126: nrqcs SG lqava THIK_PSEFR : 147- 148: yaaka SG mmglt THIK_PSEFR : 351- 352: hpfgc SG arisg THIK_PSEFR : 356- 357: sgari SG tllnv THIK_YARLI : 117- 118: nrqcs SG lmavn THIK_YARLI : 390- 391: selke SG kkvgv THIK_YEAST : 110- 111: aacla SG ipyst THIK_YEAST : 127- 128: nrqcs SG ltavn THIL_ALCEU : 61- 62: vltag SG qnpar THIL_ALCEU : 90- 91: nkvcg SG lkavm THIL_ALCEU : 230- 231: tldsm SG lkpaf THIL_ALCEU : 248- 249: taana SG lndga THIL_ALCEU : 354- 355: hpiga SG crilv THIL_BACSU : 44- 45: qqagv SG ddveg THIL_BACSU : 61- 62: vvqag SG qipsr THIL_BACSU : 90- 91: nkvca SG lravt THIL_BACSU : 354- 355: hpiga SG arilm THIL_BACSU : 380- 381: vaaic SG aaqgd THIL_CANTR : 8- 9: rlnql SG qlkpn THIL_CANTR : 114- 115: nrfcs SG lmais THIL_CANTR : 207- 208: akava SG afkse THIL_CANTR : 397- 398: smcig SG mgsas THIL_CHRVI : 91- 92: nkvcg SG lkavh THIL_CHRVI : 249- 250: tagna SG indga THIL_CHRVI : 355- 356: hpiga SG arvlv THIL_CLOAB : 90- 91: nkvcg SG lrtvs THIL_CLOAB : 192- 193: eeaik SG qfkde THIL_CLOAB : 247- 248: tagna SG lndca THIL_CLOAB : 353- 354: hpiga SG arilv THIL_CLODI : 95- 96: nivcg SG lrswr THIL_HAEIN : 90- 91: nkvcg SG lksva THIL_HAEIN : 104- 105: aqsii SG dadiv THIL_HAEIN : 248- 249: tagna SG indga THIL_HAEIN : 281- 282: irsya SG gvdps THIL_HAEIN : 354- 355: hpiga SG arilv THIL_HUMAN : 10- 11: aallr SG arsrs THIL_HUMAN : 128- 129: nkvca SG mkaim THIL_HUMAN : 390- 391: hpigm SG arivg THIL_MYCLE : 90- 91: nkmcl SG ldaia THIL_MYCLE : 130- 131: lmdsr SG ykygd THIL_MYCLE : 354- 355: hplgm SG aritl THIL_MYCLE : 371- 372: larrg SG ygvaa THIL_PIG : 23- 24: ikvca SG mk THIL_RAT : 125- 126: nkvca SG mkaim THIL_RAT : 387- 388: hpigm SG arivv THIL_SACUV : 359- 360: hplgc SG arvvv THIL_THIVI : 91- 92: nkvcg SG lkavh THIL_THIVI : 193- 194: eaaiq SG rfade THIL_THIVI : 249- 250: tagna SG indga THIL_THIVI : 355- 356: hpiga SG arvlv THIL_YEAST : 359- 360: hplgc SG arvvv THIL_ZOORA : 90- 91: nqlcg SG lrava THIL_ZOORA : 246- 247: tagna SG lndga THIL_ZOORA : 352- 353: hpiga SG ariln THIM_CANTR : 93- 94: nkvca SG mkavi THIM_CANTR : 133- 134: lpsar SG arygd THIM_CANTR : 281- 282: plaki SG wgeaa THIM_CANTR : 358- 359: hplgc SG ariiv THIM_HUMAN : 94- 95: nrlcg SG fqsiv THIM_HUMAN : 251- 252: tagna SG vadga THIM_HUMAN : 285- 286: vgyfv SG cdpsi THIM_HUMAN : 301- 302: pvpai SG alkka THIM_HUMAN : 357- 358: hplgg SG srita THIM_RAT : 94- 95: nrlcg SG fqsiv THIM_RAT : 101- 102: fqsiv SG cqeic THIM_RAT : 251- 252: tagna SG msdga THIM_RAT : 285- 286: vgyfv SG cdpai THIM_RAT : 344- 345: sktnv SG gaial THIM_RAT : 357- 358: hplgg SG srita YKA3_CAEEL : 39- 40: tpfvv SG tvfkd YKA3_CAEEL : 198- 199: etmgh SG drlaa YKA3_CAEEL : 380- 381: eqmkr SG kfgrv Number of patterns evaluated by Pratt:219 Total running time: 2 seconds