------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 11 sequences from file SYNDECAN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 11 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename SYNDECAN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: SDC1_HUMAN 310 SDC1_MESAU 309 SDC1_MOUSE 311 SDC1_RAT 313 SDC2_HUMAN 201 SDC2_MOUSE 202 SDC2_RAT 201 SDC3_CHICK 384 SDC3_RAT 353 SDC4_HUMAN 198 SDC4_RAT 202 Pratt run started at Thu Feb 6 21:20:53 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 94.9112 11( 11) R-x-E-V-L-x(3)-I-x-G-G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 2: 90.7411 11( 11) E-V-L-x(3)-I-x-G-G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 3: 86.5711 11( 11) V-L-x(3)-I-x-G-G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 4: 82.4010 11( 11) L-x(3)-I-x-G-G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 5: 78.2310 11( 11) I-x-G-G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 6: 77.7310 11( 11) L-x(1,2)-V-x(0,2)-G-G-x(2)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 7: 74.0609 11( 11) G-G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 8: 73.5609 13( 11) V-x(1,3)-G-x-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 9: 69.8909 19( 11) G-x(1,2)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 10: 69.8909 17( 11) G-x(0,1)-V-x(0,1)-G-x(2)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 11: 69.8909 11( 11) G-x(2)-G-x(0,1)-L-x(0,1)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 12: 65.7208 11( 11) G-x(0,1)-L-x(0,1)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 13: 65.2208 14( 11) V-x(1,3)-L-x(0,1)-F-A-x(2)-L-x(5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 14: 60.5508 11( 11) F-A-x(2)-L-x(2,4)-L-x(0,2)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 15: 53.2107 11( 11) L-x(3,4)-L-x(0,1)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 16: 52.7107 16( 11) F-x(2,3)-L-x(3,5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L 17: 45.3706 11( 11) L-x(1,2)-R-M-x-K-K-D-E-G-S-Y-x-L 18: 44.8706 11( 11) Y-R-M-x(0,1)-K-K-x(0,1)-D-E-G-S-Y-x-L 19: 40.7005 11( 11) M-x-K-K-D-E-G-S-Y-x-L-x(1,3)-K 20: 40.7005 11( 11) R-M-x(0,1)-K-K-x(0,1)-D-E-G-S-Y-x-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 137.3913 11( 11) R-x-E-V-L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] B 2: 133.2212 11( 11) E-V-L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] C 3: 129.0511 11( 11) V-L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] D 4: 124.8811 11( 11) L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] E 5: 114.3158 11( 11) L-x(1,2)-V-x(0,2)-G-G-[ILV]-[IV]-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] F 6: 112.1149 11( 11) I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] G 7: 106.4998 13( 11) V-x(1,3)-G-[GILV]-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] H 8: 104.7590 11( 11) G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] I 9: 103.1890 11( 11) G-[ILV]-[IV]-G-x(0,1)-L-x(0,1)-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] J 10: 100.5890 19( 11) G-x(1,2)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] K 11: 100.5890 17( 11) G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] L 12: 93.1323 11( 11) G-x(0,1)-L-x(0,1)-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] M 13: 92.6323 14( 11) V-x(1,3)-L-x(0,1)-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] N 14: 75.5078 11( 11) F-A-[AIV]-x-L-x(2,4)-L-x(0,2)-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] O 15: 65.5022 11( 11) L-x(3,4)-L-x(0,1)-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] P 16: 65.0022 16( 11) F-x(2,3)-L-x(3,5)-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Q 17: 57.6621 11( 11) L-x(1,2)-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] R 18: 53.9139 11( 11) Y-R-M-x(0,1)-K-K-x(0,1)-D-E-G-S-Y-[DST]-L-[EG]-[EK] S 19: 52.7107 16( 11) F-x(2,3)-L-x(3,5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L T 20: 49.7439 11( 11) R-M-x(0,1)-K-K-x(0,1)-D-E-G-S-Y-[DST]-L-[EG]-[EK] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 137.3913 11( 11) R-x-E-V-L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 249- 290: qglld RkEVLGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 248- 289: qglld RkEVLGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 250- 291: qslld RkEVLGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 252- 293: qglld RkEVLGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 142- 183: dslfk RtEVLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 143- 184: dnlfk RtEVLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 142- 183: dnlfk RtEVLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 324- 365: knile RkEVLIAVIVGGvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 324- 365: knile RkEVLIAVIVGG-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 293- 334: ksile RkEVLVAVIVGGvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 293- 334: ksile RkEVLVAVIVGG-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 143- 184: snife RtEVLAALIVGGiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 147- 188: snife RtEVLAALIVGGvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 147- 188: snife RtEVLAALIVGG-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk B 2: 133.2212 11( 11) E-V-L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 251- 290: lldrk EVLGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 250- 289: lldrk EVLGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 252- 291: lldrk EVLGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 254- 293: lldrk EVLGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 144- 183: lfkrt EVLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 145- 184: lfkrt EVLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 144- 183: lfkrt EVLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 326- 365: ilerk EVLIAVIVGGvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 326- 365: ilerk EVLIAVIVGG-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 295- 334: ilerk EVLVAVIVGGvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 295- 334: ilerk EVLVAVIVGG-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 145- 184: ifert EVLAALIVGGiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 149- 188: ifert EVLAALIVGGvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 149- 188: ifert EVLAALIVGG-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk C 3: 129.0511 11( 11) V-L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 252- 290: ldrke VLGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 251- 289: ldrke VLGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 253- 291: ldrke VLGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 255- 293: ldrke VLGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 145- 183: fkrte VLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 146- 184: fkrte VLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 145- 183: fkrte VLAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 327- 365: lerke VLIAVIVGGvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 327- 365: lerke VLIAVIVGG-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 296- 334: lerke VLVAVIVGGvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 296- 334: lerke VLVAVIVGG-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 146- 184: ferte VLAALIVGGiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 150- 188: ferte VLAALIVGGvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 150- 188: ferte VLAALIVGG-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk D 4: 124.8811 11( 11) L-[AGIV]-[AG]-[LV]-I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 253- 290: drkev LGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 252- 289: drkev LGGVIAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 254- 291: drkev LGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 256- 293: drkev LGGVIAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 146- 183: krtev LAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 147- 184: krtev LAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 146- 183: krtev LAAVIAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 328- 365: erkev LIAVIVGGvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 328- 365: erkev LIAVIVGG-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 297- 334: erkev LVAVIVGGvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 297- 334: erkev LVAVIVGG-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 147- 184: ertev LAALIVGGiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 151- 188: ertev LAALIVGGvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 151- 188: ertev LAALIVGG-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk E 5: 114.3158 11( 11) L-x(1,2)-V-x(0,2)-G-G-[ILV]-[IV]-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 253- 290: drkev LggViaGGLVGlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 252- 289: drkev LggViaGGLVGlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 254- 291: drkev LggViaGGLVGlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 256- 293: drkev LggViaGGLVGlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 146- 183: krtev LaaViaGGVIGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 147- 184: krtev LaaViaGGVIGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 146- 183: krtev LaaViaGGVIGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 328- 365: erkev LiaVivGGVVGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 297- 334: erkev LvaVivGGVVGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 150- 184: evlaa Li-V--GGIVGiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 154- 188: evlaa Li-V--GGVVGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk F 6: 112.1149 11( 11) I-[AV]-G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 257- 290: vlggv IAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 256- 289: vlggv IAGGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 258- 291: vlggv IAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 260- 293: vlggv IAGGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 150- 183: vlaav IAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 151- 184: vlaav IAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 150- 183: vlaav IAGG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 332- 365: vliav IVGGvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 332- 365: vliav IVGG-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 301- 334: vlvav IVGGvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 301- 334: vlvav IVGG-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 151- 184: vlaal IVGGiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 155- 188: vlaal IVGGvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 155- 188: vlaal IVGG-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk G 7: 106.4998 13( 11) V-x(1,3)-G-[GILV]-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 13(11) SDC1_HUMAN : 256- 290: evlgg ViagGLV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 255- 289: evlgg ViagGLV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 257- 291: evlgg ViagGLV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 259- 293: evlgg ViagGLV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 149- 183: evlaa Via-GGViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 150- 184: evlaa Via-GGViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 149- 183: evlaa Via-GGViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 331- 365: evlia VivgGVV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 331- 365: evlia Viv-GGVvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 333- 365: liavi Vg--GVV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 300- 334: evlva VivgGVV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 300- 334: evlva Viv-GGVvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 302- 334: lvavi Vg--GVV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 152- 184: laali Vg--GIV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 156- 188: laali Vg--GVV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk H 8: 104.7590 11( 11) G-G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 259- 290: ggvia GGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 258- 289: ggvia GGlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 260- 291: ggvia GGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 262- 293: ggvia GGlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 152- 183: aavia GG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 153- 184: aavia GG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 152- 183: aavia GG-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 334- 365: iaviv GGvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 334- 365: iaviv GG-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 303- 334: vaviv GGvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 303- 334: vaviv GG-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 153- 184: aaliv GGiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 157- 188: aaliv GGvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 157- 188: aaliv GG-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk I 9: 103.1890 11( 11) G-[ILV]-[IV]-G-x(0,1)-L-x(0,1)-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 260- 290: gviag GLVG-LiFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 259- 289: gviag GLVG-LiFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 261- 291: gviag GLVG-LiFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 263- 293: gviag GLVG-LiFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 153- 183: aviag GVIGfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 154- 184: aviag GVIGfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 153- 183: aviag GVIGfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 335- 365: avivg GVVGaL-FAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 304- 334: avivg GVVGaL-FAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 154- 184: alivg GIVGiL-FAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 158- 188: alivg GVVGiL-FAVfLIlLLVYRMKKKDEGSYDLGK kpiyk J 10: 100.5890 19( 11) G-x(1,2)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 19(11) SDC1_HUMAN : 259- 290: ggvia GglV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_HUMAN : 260- 290: gviag Gl-V-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 258- 289: ggvia GglV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 259- 289: gviag Gl-V-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 260- 291: ggvia GglV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 261- 291: gviag Gl-V-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 262- 293: ggvia GglV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 263- 293: gviag Gl-V-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 152- 183: aavia Gg-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 153- 184: aavia Gg-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 152- 183: aavia Gg-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 334- 365: iaviv GgvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 334- 365: iaviv Gg-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 335- 365: avivg Gv-V-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 303- 334: vaviv GgvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 303- 334: vaviv Gg-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 304- 334: avivg Gv-V-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 153- 184: aaliv GgiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_HUMAN : 154- 184: alivg Gi-V-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 157- 188: aaliv GgvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 157- 188: aaliv Gg-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 158- 188: alivg Gv-V-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk K 11: 100.5890 17( 11) G-x(0,1)-V-x(0,1)-G-x-[IL]-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 17(11) SDC1_HUMAN : 260- 290: gviag GlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 259- 289: gviag GlV-GlIFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 261- 291: gviag GlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 263- 293: gviag GlV-GlIFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 152- 183: aavia GgViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_HUMAN : 153- 183: aviag G-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 153- 184: aavia GgViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 154- 184: aviag G-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 152- 183: aavia GgViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 153- 183: aviag G-ViGfLFAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 334- 365: iaviv GgVvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 335- 365: avivg GvV-GaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 335- 365: avivg G-VvGaLFAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 303- 334: vaviv GgVvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 304- 334: avivg GvV-GaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 304- 334: avivg G-VvGaLFAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 154- 184: alivg GiV-GiLFAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 157- 188: aaliv GgVvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 158- 188: alivg GvV-GiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 158- 188: alivg G-VvGiLFAVfLIlLLVYRMKKKDEGSYDLGK kpiyk L 12: 93.1323 11( 11) G-x(0,1)-L-x(0,1)-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 263- 290: agglv G-LiFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 262- 289: agglv G-LiFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 264- 291: agglv G-LiFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 266- 293: agglv G-LiFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 156- 183: aggvi GfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 157- 184: aggvi GfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 156- 183: aggvi GfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 338- 365: vggvv GaL-FAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 307- 334: vggvv GaL-FAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 157- 184: vggiv GiL-FAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 161- 188: vggvv GiL-FAVfLIlLLVYRMKKKDEGSYDLGK kpiyk M 13: 92.6323 14( 11) V-x(1,3)-L-x(0,1)-F-A-[AIV]-x-L-[IV]-x-[FL]-[LM]-[ILMV]-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 14(11) SDC1_HUMAN : 262- 290: iaggl Vg--LiFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 261- 289: iaggl Vg--LiFAVcLVgFMLYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 263- 291: iaggl Vg--LiFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC1_RAT : 265- 293: iaggl Vg--LiFAVcLVaFMLYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 154- 183: viagg VigfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 155- 184: viagg VigfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC2_RAT : 154- 183: viagg VigfL-FAIfLIlLLVYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 336- 365: vivgg VvgaL-FAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_CHICK : 337- 365: ivggv Vga-L-FAAfLVmLLIYRMKKKDEGSYTLEE pkqan SDC3_RAT : 305- 334: vivgg VvgaL-FAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC3_RAT : 306- 334: ivggv Vga-L-FAAfLVtLLIYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 156- 184: ivggi Vgi-L-FAVfLIlLLMYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 159- 188: livgg VvgiL-FAVfLIlLLVYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 160- 188: ivggv Vgi-L-FAVfLIlLLVYRMKKKDEGSYDLGK kpiyk N 14: 75.5078 11( 11) F-A-[AIV]-x-L-x(2,4)-L-x(0,2)-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 266- 290: lvgli FAVcLvgfmL--YRMKKKDEGSYSLEE pkqan SDC1_MESAU : 265- 289: lvgli FAVcLvgfmL--YRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 267- 291: lvgli FAVcLvafmL--YRMKKKDEGSYSLEE pkqan SDC1_RAT : 269- 293: lvgli FAVcLvafmL--YRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 159- 183: vigfl FAIfLill-Lv-YRMRKKDEGSYDLGE rkpss SDC2_HUMAN : 159- 183: vigfl FAIfLil--LlvYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 160- 184: vigfl FAIfLill-Lv-YRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 160- 184: vigfl FAIfLil--LlvYRMRKKDEGSYDLGE rkpss SDC2_RAT : 159- 183: vigfl FAIfLill-Lv-YRMRKKDEGSYDLGE rkpss SDC2_RAT : 159- 183: vigfl FAIfLil--LlvYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 341- 365: vvgal FAAfLvml-Li-YRMKKKDEGSYTLEE pkqan SDC3_CHICK : 341- 365: vvgal FAAfLvm--LliYRMKKKDEGSYTLEE pkqan SDC3_RAT : 310- 334: vvgal FAAfLvtl-Li-YRMKKKDEGSYTLEE pkqas SDC3_RAT : 310- 334: vvgal FAAfLvt--LliYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 160- 184: ivgil FAVfLill-Lm-YRMKKKDEGSYDLGK kpiyk SDC4_HUMAN : 160- 184: ivgil FAVfLil--LlmYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 164- 188: vvgil FAVfLill-Lv-YRMKKKDEGSYDLGK kpiyk SDC4_RAT : 164- 188: vvgil FAVfLil--LlvYRMKKKDEGSYDLGK kpiyk O 15: 65.5022 11( 11) L-x(3,4)-L-x(0,1)-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 270- 290: ifavc LvgfmL-YRMKKKDEGSYSLEE pkqan SDC1_MESAU : 269- 289: ifavc LvgfmL-YRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 271- 291: ifavc LvafmL-YRMKKKDEGSYSLEE pkqan SDC1_RAT : 273- 293: ifavc LvafmL-YRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 163- 183: lfaif Lill-LvYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 164- 184: lfaif Lill-LvYRMRKKDEGSYDLGE rkpss SDC2_RAT : 163- 183: lfaif Lill-LvYRMRKKDEGSYDLGE rkpss SDC3_CHICK : 345- 365: lfaaf Lvml-LiYRMKKKDEGSYTLEE pkqan SDC3_RAT : 314- 334: lfaaf Lvtl-LiYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 164- 184: lfavf Lill-LmYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 168- 188: lfavf Lill-LvYRMKKKDEGSYDLGK kpiyk P 16: 65.0022 16( 11) F-x(2,3)-L-x(3,5)-Y-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 16(11) SDC1_HUMAN : 266- 290: lvgli FavcLvgfmlYRMKKKDEGSYSLEE pkqan SDC1_MESAU : 265- 289: lvgli FavcLvgfmlYRMKKKDEGSYSLEE pkqan SDC1_MOUSE : 267- 291: lvgli FavcLvafmlYRMKKKDEGSYSLEE pkqan SDC1_RAT : 269- 293: lvgli FavcLvafmlYRMKKKDEGSYSLEE pkqan SDC2_HUMAN : 159- 183: vigfl FaifLilllvYRMRKKDEGSYDLGE rkpss SDC2_HUMAN : 162- 183: flfai Fli-Lllv--YRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 160- 184: vigfl FaifLilllvYRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 163- 184: flfai Fli-Lllv--YRMRKKDEGSYDLGE rkpss SDC2_RAT : 159- 183: vigfl FaifLilllvYRMRKKDEGSYDLGE rkpss SDC2_RAT : 162- 183: flfai Fli-Lllv--YRMRKKDEGSYDLGE rkpss SDC3_CHICK : 341- 365: vvgal FaafLvmlliYRMKKKDEGSYTLEE pkqan SDC3_RAT : 310- 334: vvgal FaafLvtlliYRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 160- 184: ivgil FavfLilllmYRMKKKDEGSYDLGK kpiyk SDC4_HUMAN : 163- 184: ilfav Fli-Lllm--YRMKKKDEGSYDLGK kpiyk SDC4_RAT : 164- 188: vvgil FavfLilllvYRMKKKDEGSYDLGK kpiyk SDC4_RAT : 167- 188: ilfav Fli-Lllv--YRMKKKDEGSYDLGK kpiyk Q 17: 57.6621 11( 11) L-x(1,2)-R-M-[KR]-K-K-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 275- 290: lvgfm Ly-RMKKKDEGSYSLEE pkqan SDC1_MESAU : 274- 289: lvgfm Ly-RMKKKDEGSYSLEE pkqan SDC1_MOUSE : 276- 291: lvafm Ly-RMKKKDEGSYSLEE pkqan SDC1_RAT : 278- 293: lvafm Ly-RMKKKDEGSYSLEE pkqan SDC2_HUMAN : 167- 183: flill LvyRMRKKDEGSYDLGE rkpss SDC2_MOUSE : 168- 184: flill LvyRMRKKDEGSYDLGE rkpss SDC2_RAT : 167- 183: flill LvyRMRKKDEGSYDLGE rkpss SDC3_CHICK : 349- 365: flvml LiyRMKKKDEGSYTLEE pkqan SDC3_RAT : 318- 334: flvtl LiyRMKKKDEGSYTLEE pkqas SDC4_HUMAN : 168- 184: flill LmyRMKKKDEGSYDLGK kpiyk SDC4_RAT : 172- 188: flill LvyRMKKKDEGSYDLGK kpiyk R 18: 53.9139 11( 11) Y-R-M-x(0,1)-K-K-x(0,1)-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 276- 290: vgfml YRMkKK-DEGSYSLEE pkqan SDC1_HUMAN : 276- 290: vgfml YRM-KKkDEGSYSLEE pkqan SDC1_MESAU : 275- 289: vgfml YRMkKK-DEGSYSLEE pkqan SDC1_MESAU : 275- 289: vgfml YRM-KKkDEGSYSLEE pkqan SDC1_MOUSE : 277- 291: vafml YRMkKK-DEGSYSLEE pkqan SDC1_MOUSE : 277- 291: vafml YRM-KKkDEGSYSLEE pkqan SDC1_RAT : 279- 293: vafml YRMkKK-DEGSYSLEE pkqan SDC1_RAT : 279- 293: vafml YRM-KKkDEGSYSLEE pkqan SDC2_HUMAN : 169- 183: illlv YRMrKK-DEGSYDLGE rkpss SDC2_MOUSE : 170- 184: illlv YRMrKK-DEGSYDLGE rkpss SDC2_RAT : 169- 183: illlv YRMrKK-DEGSYDLGE rkpss SDC3_CHICK : 351- 365: vmlli YRMkKK-DEGSYTLEE pkqan SDC3_CHICK : 351- 365: vmlli YRM-KKkDEGSYTLEE pkqan SDC3_RAT : 320- 334: vtlli YRMkKK-DEGSYTLEE pkqas SDC3_RAT : 320- 334: vtlli YRM-KKkDEGSYTLEE pkqas SDC4_HUMAN : 170- 184: illlm YRMkKK-DEGSYDLGK kpiyk SDC4_HUMAN : 170- 184: illlm YRM-KKkDEGSYDLGK kpiyk SDC4_RAT : 174- 188: illlv YRMkKK-DEGSYDLGK kpiyk SDC4_RAT : 174- 188: illlv YRM-KKkDEGSYDLGK kpiyk S 19: 52.7107 16( 11) F-x(2,3)-L-x(3,5)-Y-R-M-x-K-K-D-E-G-S-Y-x-L Occurences: 16(11) SDC1_HUMAN : 266- 288: lvgli FavcLvgfmlYRMkKKDEGSYsL eepkq SDC1_MESAU : 265- 287: lvgli FavcLvgfmlYRMkKKDEGSYsL eepkq SDC1_MOUSE : 267- 289: lvgli FavcLvafmlYRMkKKDEGSYsL eepkq SDC1_RAT : 269- 291: lvgli FavcLvafmlYRMkKKDEGSYsL eepkq SDC2_HUMAN : 159- 181: vigfl FaifLilllvYRMrKKDEGSYdL gerkp SDC2_HUMAN : 162- 181: flfai Fli-Lllv--YRMrKKDEGSYdL gerkp SDC2_MOUSE : 160- 182: vigfl FaifLilllvYRMrKKDEGSYdL gerkp SDC2_MOUSE : 163- 182: flfai Fli-Lllv--YRMrKKDEGSYdL gerkp SDC2_RAT : 159- 181: vigfl FaifLilllvYRMrKKDEGSYdL gerkp SDC2_RAT : 162- 181: flfai Fli-Lllv--YRMrKKDEGSYdL gerkp SDC3_CHICK : 341- 363: vvgal FaafLvmlliYRMkKKDEGSYtL eepkq SDC3_RAT : 310- 332: vvgal FaafLvtlliYRMkKKDEGSYtL eepkq SDC4_HUMAN : 160- 182: ivgil FavfLilllmYRMkKKDEGSYdL gkkpi SDC4_HUMAN : 163- 182: ilfav Fli-Lllm--YRMkKKDEGSYdL gkkpi SDC4_RAT : 164- 186: vvgil FavfLilllvYRMkKKDEGSYdL gkkpi SDC4_RAT : 167- 186: ilfav Fli-Lllv--YRMkKKDEGSYdL gkkpi T 20: 49.7439 11( 11) R-M-x(0,1)-K-K-x(0,1)-D-E-G-S-Y-[DST]-L-[EG]-[EK] Occurences: 11(11) SDC1_HUMAN : 277- 290: gfmly RMkKK-DEGSYSLEE pkqan SDC1_HUMAN : 277- 290: gfmly RM-KKkDEGSYSLEE pkqan SDC1_MESAU : 276- 289: gfmly RMkKK-DEGSYSLEE pkqan SDC1_MESAU : 276- 289: gfmly RM-KKkDEGSYSLEE pkqan SDC1_MOUSE : 278- 291: afmly RMkKK-DEGSYSLEE pkqan SDC1_MOUSE : 278- 291: afmly RM-KKkDEGSYSLEE pkqan SDC1_RAT : 280- 293: afmly RMkKK-DEGSYSLEE pkqan SDC1_RAT : 280- 293: afmly RM-KKkDEGSYSLEE pkqan SDC2_HUMAN : 170- 183: lllvy RMrKK-DEGSYDLGE rkpss SDC2_MOUSE : 171- 184: lllvy RMrKK-DEGSYDLGE rkpss SDC2_RAT : 170- 183: lllvy RMrKK-DEGSYDLGE rkpss SDC3_CHICK : 352- 365: mlliy RMkKK-DEGSYTLEE pkqan SDC3_CHICK : 352- 365: mlliy RM-KKkDEGSYTLEE pkqan SDC3_RAT : 321- 334: tlliy RMkKK-DEGSYTLEE pkqas SDC3_RAT : 321- 334: tlliy RM-KKkDEGSYTLEE pkqas SDC4_HUMAN : 171- 184: lllmy RMkKK-DEGSYDLGK kpiyk SDC4_HUMAN : 171- 184: lllmy RM-KKkDEGSYDLGK kpiyk SDC4_RAT : 175- 188: lllvy RMkKK-DEGSYDLGK kpiyk SDC4_RAT : 175- 188: lllvy RM-KKkDEGSYDLGK kpiyk Number of patterns evaluated by Pratt:5692 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