------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file SULFATASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename SULFATASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ARSA_HUMAN 507 ARSB_FELCA 535 ARSB_HUMAN 533 ARS_HEMPU 551 ARS_KLEAE 464 ASLA_ECOLI 551 GA6S_HUMAN 522 GL6S_HUMAN 552 IDS_HUMAN 550 IDS_MOUSE 563 STS_HUMAN 583 STS_RAT 26 YIDJ_ECOLI 497 Pratt run started at Thu Feb 6 21:16:19 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 24( 13) L-x(0,2)-G-x(3)-L 2: 11.5102 19( 13) D-x(0,1)-G-x(2,3)-L 3: 11.5102 21( 13) A-x(1,2)-D-x(0,1)-L 4: 11.5102 23( 13) A-x(1,2)-L-x(1,2)-G 5: 11.5102 24( 13) L-x(3,5)-D-D 6: 11.5102 23( 13) L-x(1,3)-D-D 7: 11.5102 24( 13) P-x(2,3)-L-x(2,3)-A 8: 11.5102 22( 13) P-x(3)-L-x(2,4)-D 9: 11.0102 23( 13) G-x(0,1)-Y-x(0,2)-G 10: 11.0102 31( 13) L-x(0,1)-G-x(2,4)-G 11: 11.0102 31( 13) D-x(1,2)-G-x(2,4)-G 12: 11.0102 34( 13) G-x(1,3)-L-x(0,1)-G 13: 11.0102 32( 13) G-x(3,4)-L-x(1,3)-G 14: 11.0102 33( 13) G-x(3,5)-L-x(0,1)-G 15: 11.0102 34( 13) G-x(2,4)-L-x(0,1)-G 16: 11.0102 24( 13) D-x(0,1)-L-x(1,3)-D 17: 11.0102 39( 13) D-x(0,2)-L-x(3,4)-L 18: 11.0102 24( 13) D-x(1,2)-G-x(1,3)-G 19: 11.0102 32( 13) D-x(1,3)-L-x(4,5)-L 20: 11.0102 37( 13) D-x(1,3)-L-x(3,4)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 13.7881 17( 13) A-x(1,2)-D-x(0,1)-L-[AGNQ] B 2: 13.5518 19( 13) L-x(1,3)-D-D-[FILMV] C 3: 12.9228 19( 13) D-x(1,2)-G-x(1,3)-G-[ADEQS] D 4: 11.5102 24( 13) L-x(0,2)-G-x(3)-L E 5: 11.5102 19( 13) D-x(0,1)-G-x(2,3)-L F 6: 11.5102 23( 13) A-x(1,2)-L-x(1,2)-G G 7: 11.5102 24( 13) L-x(3,5)-D-D H 8: 11.5102 24( 13) P-x(2,3)-L-x(2,3)-A I 9: 11.5102 22( 13) P-x(3)-L-x(2,4)-D J 10: 11.0102 23( 13) G-x(0,1)-Y-x(0,2)-G K 11: 11.0102 31( 13) L-x(0,1)-G-x(2,4)-G L 12: 11.0102 31( 13) D-x(1,2)-G-x(2,4)-G M 13: 11.0102 34( 13) G-x(1,3)-L-x(0,1)-G N 14: 11.0102 32( 13) G-x(3,4)-L-x(1,3)-G O 15: 11.0102 33( 13) G-x(3,5)-L-x(0,1)-G P 16: 11.0102 34( 13) G-x(2,4)-L-x(0,1)-G Q 17: 11.0102 24( 13) D-x(0,1)-L-x(1,3)-D R 18: 11.0102 39( 13) D-x(0,2)-L-x(3,4)-L S 19: 11.0102 32( 13) D-x(1,3)-L-x(4,5)-L T 20: 11.0102 37( 13) D-x(1,3)-L-x(3,4)-L Best patterns with alignements: fitness hits(seqs) Pattern A 1: 13.7881 17( 13) A-x(1,2)-D-x(0,1)-L-[AGNQ] Occurences: 17(13) ARSA_HUMAN : 28- 32: ivlif Ad-D-LG ygdlg ARSA_HUMAN : 264- 269: gtlmt AigD-LG lleet ARSB_FELCA : 54- 58: lvfvl Ad-D-LG wndvs ARSB_FELCA : 184- 190: sherc AliDsLN vtrca ARSB_HUMAN : 52- 56: lvfll Ad-D-LG wndvg ARS_HEMPU : 367- 371: diiat Aa-D-LG gttlp ARS_KLEAE : 222- 228: wlaft AphDpLQ apdew ASLA_ECOLI : 413- 417: dlfpt Al-D-LA ghpga GA6S_HUMAN : 362- 367: ppsdr Ai-DgLN llptl GL6S_HUMAN : 370- 375: skmlv AniD-LG ptild GL6S_HUMAN : 382- 387: tildi AgyD-LN ktqmd IDS_HUMAN : 317- 322: grlls AldD-LQ lanst IDS_HUMAN : 317- 322: grlls Al-DdLQ lanst IDS_MOUSE : 48- 53: aqgns At-DaLN illii STS_HUMAN : 34- 38: iilvm Ad-D-LG igdpg STS_RAT : 14- 18: fllim Ad-D-LG igdlg YIDJ_ECOLI : 170- 175: risnr Av-DfLQ qpara YIDJ_ECOLI : 218- 223: elgek AqdD-LA nkpeh YIDJ_ECOLI : 218- 223: elgek Aq-DdLA nkpeh B 2: 13.5518 19( 13) L-x(1,3)-D-D-[FILMV] Occurences: 19(13) ARSA_HUMAN : 25- 31: ppniv LifaDDL gygdl ARSB_FELCA : 53- 57: hlvfv La--DDL gwndv ARSB_HUMAN : 50- 55: phlvf Lla-DDL gwndv ARSB_HUMAN : 51- 55: hlvfl La--DDL gwndv ARS_HEMPU : 259- 265: hmhts LfssDDF sctsr ARS_KLEAE : 187- 191: gervs Lp--DDF yssea ASLA_ECOLI : 92- 96: nvvvf Ll--DDV gwmdv GA6S_HUMAN : 35- 41: ppnil LllmDDM gwgdl GA6S_HUMAN : 36- 41: pnill Llm-DDM gwgdl GA6S_HUMAN : 37- 41: nilll Lm--DDM gwgdl GL6S_HUMAN : 296- 302: krwqt LlsvDDL veklv GL6S_HUMAN : 297- 302: rwqtl Lsv-DDL veklv IDS_HUMAN : 41- 47: alnvl LiivDDL rpslg IDS_HUMAN : 315- 321: qvgrl LsalDDL qlans IDS_MOUSE : 56- 62: alnil LiivDDL rpslg IDS_MOUSE : 330- 336: qvghv LsalDDL rlahn STS_HUMAN : 31- 37: rpnii LvmaDDL gigdp STS_RAT : 11- 17: gpnfl LimaDDL gigdl YIDJ_ECOLI : 414- 418: nemhn Li--DDI rfadv C 3: 12.9228 19( 13) D-x(1,2)-G-x(1,3)-G-[ADEQS] Occurences: 19(13) ARSA_HUMAN : 29- 35: vlifa DdlGy--GD lgcyg ARSA_HUMAN : 30- 35: lifad Dl-Gy--GD lgcyg ARSB_FELCA : 524- 530: qdprc DpkGt--GA wgpwv ARSB_HUMAN : 59- 65: dlgwn Dv-Gfh-GS rirtp ARS_HEMPU : 60- 66: vllva DhmGs--GD ltsyg ARS_KLEAE : 355- 362: fdnsy DnvGrk-GS fvsyg ASLA_ECOLI : 415- 422: fptal DlaGhp-GA kvanl GA6S_HUMAN : 39- 45: llllm DdmGw--GD lgvyg GA6S_HUMAN : 40- 45: lllmd Dm-Gw--GD lgvyg GA6S_HUMAN : 45- 51: dmgwg Dl-Gvy-GE psret GL6S_HUMAN : 326- 333: ifyts Dn-GyhtGQ fslpi IDS_HUMAN : 334- 341: iafts Dh-GwalGE hgewa IDS_MOUSE : 349- 356: iafts Dh-GwalGE hgewa STS_HUMAN : 35- 41: ilvma DdlGi--GD pgcyg STS_HUMAN : 36- 41: lvmad Dl-Gi--GD pgcyg STS_RAT : 15- 21: llima DdlGi--GD lgxyg STS_RAT : 16- 21: limad Dl-Gi--GD lgxyg YIDJ_ECOLI : 107- 113: hldgh DyfGt--GE cppew YIDJ_ECOLI : 284- 291: viyts Dh-GemmGA hklis D 4: 11.5102 24( 13) L-x(0,2)-G-x(3)-L Occurences: 24(13) ARSA_HUMAN : 31- 36: ifadd L--GygdL gcygh ARSB_FELCA : 19- 26: sprrp LlpGvlpL llrll ARSB_FELCA : 20- 26: prrpl Lp-GvlpL llrll ARSB_FELCA : 77- 84: phlde LaaGgvlL dnyyt ARSB_HUMAN : 75- 82: phlda LaaGgvlL dnyyt ARS_HEMPU : 9- 15: apflf Ll-GllgL vtaqt ARS_HEMPU : 10- 15: pflfl L--GllgL vtaqt ARS_HEMPU : 370- 375: ataad L--GgttL ptdri ARS_HEMPU : 500- 507: ehkaa LvkGtplL dsfdh ARS_KLEAE : 128- 135: agynt LmaGkwhL gfvpg ASLA_ECOLI : 166- 172: gqpgg Lq-GlttL pqllh GA6S_HUMAN : 198- 205: efpin LktGeanL tqiyl GL6S_HUMAN : 61- 67: dqdev Lg-GmtpL kktka GL6S_HUMAN : 374- 379: vanid L--GptiL diagy GL6S_HUMAN : 400- 406: sllpi Lr-GasnL twrsd IDS_HUMAN : 410- 416: slfpt La-GlagL qvppr IDS_MOUSE : 425- 431: slfpt La-GlagL pvllg IDS_MOUSE : 428- 434: ptlag La-GlpvL lgaps IDS_MOUSE : 434- 440: aglpv Ll-GapsL lfmls IDS_MOUSE : 435- 440: glpvl L--GapsL lfmls STS_HUMAN : 58- 65: pnidr LasGgvkL tqhla STS_HUMAN : 131- 137: gysta Li-GkwhL gmsch STS_RAT : 17- 22: imadd L--GigdL gxyg YIDJ_ECOLI : 347- 353: ekpei Lp-GeniL avkep E 5: 11.5102 19( 13) D-x(0,1)-G-x(2,3)-L Occurences: 19(13) ARSA_HUMAN : 30- 36: lifad DlGygdL gcygh ARSA_HUMAN : 354- 358: pnvtl D-Gfd-L splll ARSB_FELCA : 302- 308: fifst DnGgqtL aggnn ARSB_HUMAN : 300- 306: fifst DnGgqtL aggnn ARS_HEMPU : 168- 172: ensst D-Gah-L pfnhg ARS_HEMPU : 369- 375: iataa DlGgttL ptdri ARS_KLEAE : 122- 128: aerfk DaGyntL magkw ASLA_ECOLI : 277- 283: dqrwm DyGvkfL dkmak ASLA_ECOLI : 401- 406: qprks D-GivdL adlfp GA6S_HUMAN : 40- 46: lllmd DmGwgdL gvyge GA6S_HUMAN : 288- 293: vffts DnGaa-L isape GA6S_HUMAN : 364- 368: sdrai D-Gln-L lptll GA6S_HUMAN : 364- 369: sdrai D-GlnlL ptllq GL6S_HUMAN : 373- 379: lvani DlGptiL diagy GL6S_HUMAN : 392- 396: nktqm D-Gms-L lpilr GL6S_HUMAN : 392- 397: nktqm D-GmslL pilrg IDS_HUMAN : 334- 339: iafts DhGwa-L gehge IDS_MOUSE : 349- 354: iafts DhGwa-L gehge STS_HUMAN : 422- 426: edrii D-Grd-L mplle STS_RAT : 16- 22: limad DlGigdL gxyg YIDJ_ECOLI : 125- 130: adywf D-GanyL selte F 6: 11.5102 23( 13) A-x(1,2)-L-x(1,2)-G Occurences: 23(13) ARSA_HUMAN : 28- 34: ivlif AddLgyG dlgcy ARSA_HUMAN : 74- 79: ctpsr AalLt-G rlpvr ARSA_HUMAN : 74- 79: ctpsr Aa-LltG rlpvr ARSA_HUMAN : 75- 79: tpsra Al-Lt-G rlpvr ARSA_HUMAN : 341- 345: llptl Aa-La-G aplpn ARSB_FELCA : 6- 12: mgrrg AasLprG psprr ARSB_FELCA : 7- 12: grrga As-LprG psprr ARSB_HUMAN : 6- 12: mgprg AasLprG pgprr ARSB_HUMAN : 7- 12: gprga As-LprG pgprr ARS_HEMPU : 367- 372: diiat AadLg-G ttlpt ARS_HEMPU : 368- 372: iiata Ad-Lg-G ttlpt ARS_HEMPU : 498- 503: veehk Aa-LvkG tplld ARS_KLEAE : 460- 464: yrsrr Ae-Lr-G ASLA_ECOLI : 141- 146: ssptr AtiLt-G qysih ASLA_ECOLI : 413- 418: dlfpt AldLa-G hpgak GA6S_HUMAN : 84- 89: cspsr AalLt-G rlpir GA6S_HUMAN : 84- 89: cspsr Aa-LltG rlpir GA6S_HUMAN : 85- 89: spsra Al-Lt-G rlpir GL6S_HUMAN : 96- 101: ccpsr AsiLt-G kyphn IDS_HUMAN : 411- 415: lfptl Ag-La-G lqvpp IDS_MOUSE : 426- 430: lfptl Ag-La-G lpvll STS_HUMAN : 34- 40: iilvm AddLgiG dpgcy STS_HUMAN : 408- 412: ifptv Ak-La-G aplpe STS_RAT : 14- 20: fllim AddLgiG dlgxy YIDJ_ECOLI : 57- 62: ctpar Ag-LftG iyanq G 7: 11.5102 24( 13) L-x(3,5)-D-D Occurences: 24(13) ARSA_HUMAN : 25- 30: ppniv Lifa--DD lgygd ARSB_FELCA : 49- 56: drpph LvfvlaDD lgwnd ARSB_FELCA : 412- 418: cpgks Lapak-DD sshpa ARSB_HUMAN : 47- 54: srpph LvfllaDD lgwnd ARS_HEMPU : 226- 233: yqhkg LtqlftDD algfi ARS_HEMPU : 259- 264: hmhts Lfss--DD fscts ARS_KLEAE : 259- 265: arlka Lgiih-DD tplph ASLA_ECOLI : 242- 248: eyikq Lpfsk-DD vhavr GA6S_HUMAN : 34- 40: qppni Llllm-DD mgwgd GA6S_HUMAN : 35- 40: ppnil Lllm--DD mgwgd GL6S_HUMAN : 51- 56: rpnvv Lllt--DD qdevl GL6S_HUMAN : 296- 301: krwqt Llsv--DD lvekl GL6S_HUMAN : 464- 471: salwn LqycefDD qevfv IDS_HUMAN : 40- 46: dalnv Lliiv-DD lrpsl IDS_HUMAN : 41- 46: alnvl Liiv--DD lrpsl IDS_HUMAN : 314- 320: tqvgr Llsal-DD lqlan IDS_HUMAN : 315- 320: qvgrl Lsal--DD lqlan IDS_MOUSE : 55- 61: dalni Lliiv-DD lrpsl IDS_MOUSE : 56- 61: alnil Liiv--DD lrpsl IDS_MOUSE : 330- 335: qvghv Lsal--DD lrlah STS_HUMAN : 31- 36: rpnii Lvma--DD lgigd STS_RAT : 10- 16: pgpnf Llima-DD lgigd STS_RAT : 11- 16: gpnfl Lima--DD lgigd YIDJ_ECOLI : 214- 221: dfyye LgekaqDD lankp H 8: 11.5102 24( 13) P-x(2,3)-L-x(2,3)-A Occurences: 24(13) ARSA_HUMAN : 4- 10: mga Prs-Lll-A laagl ARSA_HUMAN : 4- 12: mga PrslLlalA aglav ARSA_HUMAN : 21- 28: avarp PnivLif-A ddlgy ARSA_HUMAN : 218- 224: qrqdr Pff-Lyy-A shhth ARSB_FELCA : 132- 138: dekll Pql-Lke-A gytth ARSB_FELCA : 233- 239: hppek Plf-Lyl-A lqsvh ARSB_FELCA : 408- 415: dispc PgksLap-A kddss ARSB_HUMAN : 25- 33: lpvvl PlllLlllA ppgsg ARSB_HUMAN : 130- 136: dekll Pql-Lke-A gytth ARSB_HUMAN : 231- 237: hppek Plf-Lyl-A lqsvh ARS_HEMPU : 52- 59: aplvk PnvvLlv-A dhmgs ARS_HEMPU : 134- 141: tktgl PkseLti-A eamke ARS_HEMPU : 245- 251: dnhad Pff-Lyv-A fahmh ARS_KLEAE : 49- 57: fggei PtpnLqamA eqgmr ASLA_ECOLI : 7- 13: efsfs Pkr-Lvv-A vaaal ASLA_ECOLI : 43- 51: agydh PnqyLvkpA ttiad ASLA_ECOLI : 411- 417: ladlf Pta-Ldl-A ghpga GA6S_HUMAN : 125- 131: seqll Pel-Lkk-A gyvsk GA6S_HUMAN : 225- 231: qarhh Pff-Lyw-A vdath GL6S_HUMAN : 376- 382: nidlg Pti-Ldi-A gydln IDS_HUMAN : 256- 263: pdpev Pdg-LppvA ynpwm IDS_MOUSE : 271- 278: pdphv Pds-LppvA ynpwm STS_HUMAN : 27- 34: haasr PniiLvm-A ddlgi STS_RAT : 7- 14: rpgpg PnflLim-A ddlgi STS_RAT : 7- 14: rpgpg Pnf-LlimA ddlgi YIDJ_ECOLI : 200- 208: hpftc PveyLekyA dfyye I 9: 11.5102 22( 13) P-x(3)-L-x(2,4)-D Occurences: 22(13) ARSA_HUMAN : 21- 29: avarp PnivLifa-D dlgyg ARSA_HUMAN : 21- 30: avarp PnivLifadD lgygd ARSA_HUMAN : 349- 357: agapl PnvtLdgf-D lspll ARSB_FELCA : 250- 258: eplqv PeeyLkpy-D fiqdk ARSB_FELCA : 389- 398: egsps PrkeLlhniD pnfvd ARSB_FELCA : 408- 417: dispc PgksLapakD dsshp ARSB_FELCA : 470- 478: pssdp PtktLwpf-D idqdp ARSB_HUMAN : 248- 256: eplqv PeeyLkpy-D fiqdk ARSB_HUMAN : 387- 396: egsps PrieLlhniD pnfvd ARSB_HUMAN : 468- 476: pssdp PtktLwlf-D idrdp ARS_HEMPU : 52- 60: aplvk PnvvLlva-D hmgsg ARS_KLEAE : 223- 231: lafta PhdpLqap-D ewikr ARS_KLEAE : 267- 274: ihddt PlphLel--D kewea ASLA_ECOLI : 227- 234: dvhvn PevaLsp--D rseyi GA6S_HUMAN : 30- 39: sgapq PpniLlllmD dmgwg GA6S_HUMAN : 31- 39: gapqp PnilLllm-D dmgwg GA6S_HUMAN : 31- 40: gapqp PnilLllmdD mgwgd GL6S_HUMAN : 47- 55: agtrr PnvvLllt-D dqdev GL6S_HUMAN : 47- 56: agtrr PnvvLlltdD qdevl IDS_HUMAN : 507- 516: wvgfn PdefLanfsD ihage IDS_MOUSE : 520- 529: wvgfd PsefLanfsD ihage STS_HUMAN : 27- 35: haasr PniiLvma-D dlgig STS_HUMAN : 27- 36: haasr PniiLvmadD lgigd STS_HUMAN : 564- 573: lqlcc PstgLscqcD rekqd STS_RAT : 7- 15: rpgpg PnflLima-D dlgig STS_RAT : 7- 16: rpgpg PnflLimadD lgigd YIDJ_ECOLI : 200- 209: hpftc PveyLekyaD fyyel J 10: 11.0102 23( 13) G-x(0,1)-Y-x(0,2)-G Occurences: 23(13) ARSA_HUMAN : 32- 34: faddl G-Y--G dlgcy ARSA_HUMAN : 37- 40: gygdl GcY--G hpsst ARSA_HUMAN : 86- 90: lpvrm GmYp-G vlvps ARSA_HUMAN : 115- 119: vlaar G-YltG magkw ARSB_FELCA : 169- 173: fdtyf G-YllG sedyy ARSB_FELCA : 445- 448: wkllt G-Yp-G cgcwf ARSB_HUMAN : 167- 171: fdtyf G-YllG sedyy ARSB_HUMAN : 443- 446: wkllt G-Yp-G cgywf ARS_HEMPU : 93- 96: lrftn G-Yv-G davct ARS_HEMPU : 148- 152: amkea G-YatG mvgkw ARS_HEMPU : 272- 275: ctsrr GrY--G dnlle ARS_KLEAE : 239- 244: ikrfk GqYeqG yaevy ASLA_ECOLI : 487- 490: aytqs G-Yq-G gftgt ASLA_ECOLI : 487- 491: aytqs G-YqgG ftgtv GA6S_HUMAN : 47- 50: gwgdl GvY--G epsre GA6S_HUMAN : 252- 255: gtsqr GrY--G davre GL6S_HUMAN : 328- 332: ytsdn G-YhtG qfslp IDS_HUMAN : 52- 55: lrpsl GcY--G dklvr IDS_MOUSE : 67- 70: lrpsl GcY--G dklvr STS_HUMAN : 43- 46: gigdp GcY--G nktir STS_HUMAN : 306- 309: gksqh GvY--G davee STS_HUMAN : 362- 366: hggsn GiYk-G gkann STS_HUMAN : 362- 367: hggsn GiYkgG kannw STS_RAT : 23- 26: gigdl GxY--G YIDJ_ECOLI : 20- 24: atnmv GcYs-G kplnt K 11: 11.0102 31( 13) L-x(0,1)-G-x(2,4)-G Occurences: 31(13) ARSA_HUMAN : 31- 37: ifadd L-GygdlG cyghp ARSA_HUMAN : 36- 40: lgygd L-Gcy--G hpsst ARSA_HUMAN : 117- 122: aargy LtGma--G kwhlg ARSA_HUMAN : 126- 132: agkwh L-GvgpeG aflpp ARSA_HUMAN : 441- 447: genyn LlGgva-G atpev ARSA_HUMAN : 442- 447: enynl LgGva--G atpev ARSA_HUMAN : 442- 447: enynl L-Ggva-G atpev ARSB_FELCA : 443- 448: gnwkl LtGyp--G cgcwf ARSB_FELCA : 443- 450: gnwkl LtGypgcG cwfpp ARSB_HUMAN : 55- 61: lladd L-GwndvG fhgsr ARSB_HUMAN : 441- 446: gnwkl LtGyp--G cgywf ARSB_HUMAN : 441- 448: gnwkl LtGypgcG ywfpp ARS_HEMPU : 9- 14: apflf LlGll--G lvtaq ARS_HEMPU : 10- 14: pflfl L-Gll--G lvtaq ARS_KLEAE : 135- 140: agkwh L-Gfvp-G atpkd ASLA_ECOLI : 416- 421: ptald LaGhp--G akvan ASLA_ECOLI : 444- 448: qtsff L-Gtn--G qsnrk GA6S_HUMAN : 46- 50: mgwgd L-Gvy--G epsre GA6S_HUMAN : 246- 252: askpf L-GtsqrG rygda GA6S_HUMAN : 444- 449: plifh L-Grdp-G erfpl GL6S_HUMAN : 31- 36: llllv LgGcl--G vfgva GL6S_HUMAN : 31- 36: llllv L-Ggcl-G vfgva GL6S_HUMAN : 35- 39: vlggc L-Gvf--G vaagt GL6S_HUMAN : 73- 78: kktka LiGem--G mtfss IDS_HUMAN : 51- 55: dlrps L-Gcy--G dklvr IDS_HUMAN : 339- 343: dhgwa L-Geh--G ewaky IDS_HUMAN : 410- 415: slfpt LaGla--G lqvpp IDS_MOUSE : 66- 70: dlrps L-Gcy--G dklvr IDS_MOUSE : 354- 358: dhgwa L-Geh--G ewaky IDS_MOUSE : 425- 430: slfpt LaGla--G lpvll STS_HUMAN : 37- 43: vmadd L-GigdpG cygnk STS_HUMAN : 131- 138: gysta LiGkwhlG mschs STS_RAT : 17- 23: imadd L-GigdlG xyg STS_RAT : 22- 26: lgigd L-Gxy--G YIDJ_ECOLI : 103- 110: igkwh LdGhdyfG tgecp L 12: 11.0102 31( 13) D-x(1,2)-G-x(2,4)-G Occurences: 31(13) ARSA_HUMAN : 29- 37: vlifa DdlGygdlG cyghp ARSA_HUMAN : 30- 37: lifad Dl-GygdlG cyghp ARSA_HUMAN : 35- 40: dlgyg Dl-Gcy--G hpsst ARSA_HUMAN : 169- 175: patpc Dg-Gcdq-G lvpip ARSB_FELCA : 302- 310: fifst DngGqtlaG gnnwp ARSB_FELCA : 524- 532: qdprc DpkGtgawG pwv ARSB_HUMAN : 53- 61: vflla DdlGwndvG fhgsr ARSB_HUMAN : 54- 61: fllad Dl-GwndvG fhgsr ARSB_HUMAN : 59- 64: dlgwn Dv-Gfh--G srirt ARSB_HUMAN : 300- 308: fifst DngGqtlaG gnnwp ARS_HEMPU : 430- 438: rvrsq DeyGlecaG gfple ARS_KLEAE : 355- 361: fdnsy DnvGrk--G sfvsy ASLA_ECOLI : 94- 102: vvfll DdvGwmdvG fnggg ASLA_ECOLI : 95- 102: vflld Dv-GwmdvG fnggg ASLA_ECOLI : 100- 105: dvgwm Dv-Gfn--G ggvav ASLA_ECOLI : 100- 106: dvgwm Dv-Gfng-G gvavg ASLA_ECOLI : 100- 107: dvgwm Dv-GfnggG vavgn ASLA_ECOLI : 415- 421: fptal DlaGhp--G akvan GA6S_HUMAN : 39- 47: llllm DdmGwgdlG vygep GA6S_HUMAN : 40- 47: lllmd Dm-GwgdlG vygep GA6S_HUMAN : 45- 50: dmgwg Dl-Gvy--G epsre GL6S_HUMAN : 326- 332: ifyts Dn-Gyht-G qfslp IDS_HUMAN : 334- 340: iafts Dh-Gwal-G ehgew IDS_MOUSE : 349- 355: iafts Dh-Gwal-G ehgew STS_HUMAN : 35- 43: ilvma DdlGigdpG cygnk STS_HUMAN : 36- 43: lvmad Dl-GigdpG cygnk STS_HUMAN : 41- 46: dlgig Dp-Gcy--G nktir STS_HUMAN : 298- 306: lfssk DfaGksqhG vygda STS_RAT : 15- 23: llima DdlGigdlG xyg STS_RAT : 16- 23: limad Dl-GigdlG xyg STS_RAT : 21- 26: dlgig Dl-Gxy--G YIDJ_ECOLI : 284- 290: viyts Dh-Gemm-G ahkli YIDJ_ECOLI : 480- 487: vvrdy Dt-GlptqG vkvee M 13: 11.0102 34( 13) G-x(1,3)-L-x(0,1)-G Occurences: 34(13) ARSA_HUMAN : 32- 37: faddl GygdL-G cyghp ARSA_HUMAN : 34- 37: ddlgy Gd--L-G cyghp ARSA_HUMAN : 115- 119: vlaar Gy--LtG magkw ARSA_HUMAN : 122- 127: ltgma GkwhL-G vgpeg ARSA_HUMAN : 266- 269: lmtai Gd--L-G lleet ARSB_FELCA : 146- 151: tthmv GkwhL-G myrke ARSB_FELCA : 169- 173: fdtyf Gyl-L-G sedyy ARSB_FELCA : 169- 173: fdtyf Gy--LlG sedyy ARSB_FELCA : 304- 310: fstdn GgqtLaG gnnwp ARSB_FELCA : 305- 310: stdng Gqt-LaG gnnwp ARSB_FELCA : 369- 375: rgstk GtkpLdG fdvwk ARSB_HUMAN : 144- 149: tthmv GkwhL-G myrke ARSB_HUMAN : 167- 171: fdtyf Gyl-L-G sedyy ARSB_HUMAN : 167- 171: fdtyf Gy--LlG sedyy ARSB_HUMAN : 302- 308: fstdn GgqtLaG gnnwp ARSB_HUMAN : 303- 308: stdng Gqt-LaG gnnwp ARSB_HUMAN : 367- 373: rghtn GtkpLdG fdvwk ARS_HEMPU : 11- 14: flfll Gl--L-G lvtaq ARS_HEMPU : 155- 160: atgmv GkwhL-G inens ARS_KLEAE : 131- 136: ntlma GkwhL-G fvpga ASLA_ECOLI : 164- 168: mygqp Gg--LqG lttlp GA6S_HUMAN : 42- 47: lmddm GwgdL-G vygep GA6S_HUMAN : 44- 47: ddmgw Gd--L-G vygep GA6S_HUMAN : 139- 144: vskiv GkwhL-G hrpqf GA6S_HUMAN : 304- 309: qggsn Gpf-LcG kqttf GA6S_HUMAN : 500- 505: nwapp GcekL-G kcltp GL6S_HUMAN : 32- 36: lllvl Ggc-L-G vfgva GL6S_HUMAN : 33- 36: llvlg Gc--L-G vfgva IDS_HUMAN : 9- 14: prtgr GllwL-G lvlss IDS_HUMAN : 336- 340: ftsdh Gwa-L-G ehgew IDS_MOUSE : 351- 355: ftsdh Gwa-L-G ehgew IDS_MOUSE : 430- 436: lagla GlpvLlG apsll STS_HUMAN : 133- 138: stali GkwhL-G mschs STS_RAT : 18- 23: maddl GigdL-G xyg STS_RAT : 20- 23: ddlgi Gd--L-G xyg YIDJ_ECOLI : 99- 105: htcyi GkwhLdG hdyfg N 14: 11.0102 32( 13) G-x(3,4)-L-x(1,3)-G Occurences: 32(13) ARSA_HUMAN : 32- 40: faddl Gygd-LgcyG hpsst ARSA_HUMAN : 122- 129: ltgma Gkwh-Lgv-G pegaf ARSA_HUMAN : 292- 301: mrmsr GgcsgLlrcG kgtty ARSA_HUMAN : 293- 301: rmsrg GcsglLrc-G kgtty ARSA_HUMAN : 293- 301: rmsrg Gcsg-LlrcG kgtty ARSA_HUMAN : 436- 443: lskdp GenynLl--G gvaga ARSA_HUMAN : 436- 444: lskdp GenynLlg-G vagat ARSB_FELCA : 5- 12: mgrr Gaas-Lpr-G psprr ARSB_FELCA : 304- 310: fstdn Ggqt-La--G gnnwp ARSB_FELCA : 304- 311: fstdn Ggqt-Lag-G nnwpl ARSB_FELCA : 311- 318: qtlag GnnwpLr--G rkwsl ARSB_FELCA : 318- 326: nwplr GrkwsLwe-G girgv ARSB_FELCA : 318- 327: nwplr GrkwsLwegG irgvg ARSB_FELCA : 369- 375: rgstk Gtkp-Ld--G fdvwk ARSB_FELCA : 438- 445: aairh GnwklLt--G ypgcg ARSB_FELCA : 438- 445: aairh Gnwk-Llt-G ypgcg ARSB_HUMAN : 5- 12: mgpr Gaas-Lpr-G pgprr ARSB_HUMAN : 302- 308: fstdn Ggqt-La--G gnnwp ARSB_HUMAN : 302- 309: fstdn Ggqt-Lag-G nnwpl ARSB_HUMAN : 309- 316: qtlag GnnwpLr--G rkwsl ARSB_HUMAN : 316- 324: nwplr GrkwsLwe-G gvrgv ARSB_HUMAN : 316- 325: nwplr GrkwsLwegG vrgvg ARSB_HUMAN : 367- 373: rghtn Gtkp-Ld--G fdvwk ARSB_HUMAN : 436- 443: aairh GnwklLt--G ypgcg ARSB_HUMAN : 436- 443: aairh Gnwk-Llt-G ypgcg ARS_HEMPU : 63- 71: vadhm Gsgd-LtsyG hptqe ARS_HEMPU : 472- 481: lhrdp GeaypLeacG hedvf ARS_KLEAE : 124- 131: rfkda Gynt-Lma-G kwhlg ASLA_ECOLI : 161- 168: mppmy GqpggLq--G lttlp GA6S_HUMAN : 42- 50: lmddm Gwgd-LgvyG epsre GL6S_HUMAN : 375- 383: anidl Gpti-LdiaG ydlnk IDS_HUMAN : 7- 14: ppprt Grgl-Lwl-G lvlss IDS_HUMAN : 365- 374: ifyvp GrtasLpeaG eklfp IDS_MOUSE : 231- 239: kmkts GspffLav-G yhkph IDS_MOUSE : 380- 389: mlyvp GrtapLpaaG qklfp IDS_MOUSE : 430- 436: lagla Glpv-Ll--G apsll STS_HUMAN : 126- 133: llkdq GystaLi--G kwhlg STS_RAT : 18- 26: maddl Gigd-LgxyG YIDJ_ECOLI : 99- 105: htcyi Gkwh-Ld--G hdyfg YIDJ_ECOLI : 290- 298: hgemm Gahk-LiskG aamyd O 15: 11.0102 33( 13) G-x(3,5)-L-x(0,1)-G Occurences: 33(13) ARSA_HUMAN : 32- 37: faddl Gygd--L-G cyghp ARSA_HUMAN : 122- 127: ltgma Gkwh--L-G vgpeg ARSA_HUMAN : 140- 146: lpphq Gfhrf-L-G ipysh ARSA_HUMAN : 436- 443: lskdp GenynlL-G gvaga ARSA_HUMAN : 436- 443: lskdp Genyn-LlG gvaga ARSA_HUMAN : 436- 444: lskdp GenynlLgG vagat ARSB_FELCA : 146- 151: tthmv Gkwh--L-G myrke ARSB_FELCA : 304- 310: fstdn Ggqt--LaG gnnwp ARSB_FELCA : 310- 318: gqtla GgnnwpLrG rkwsl ARSB_FELCA : 311- 318: qtlag Gnnwp-LrG rkwsl ARSB_FELCA : 369- 375: rgstk Gtkp--LdG fdvwk ARSB_FELCA : 438- 445: aairh Gnwkl-LtG ypgcg ARSB_HUMAN : 144- 149: tthmv Gkwh--L-G myrke ARSB_HUMAN : 302- 308: fstdn Ggqt--LaG gnnwp ARSB_HUMAN : 308- 316: gqtla GgnnwpLrG rkwsl ARSB_HUMAN : 309- 316: qtlag Gnnwp-LrG rkwsl ARSB_HUMAN : 367- 373: rghtn Gtkp--LdG fdvwk ARSB_HUMAN : 436- 443: aairh Gnwkl-LtG ypgcg ARS_HEMPU : 155- 160: atgmv Gkwh--L-G inens ARS_KLEAE : 131- 136: ntlma Gkwh--L-G fvpga ASLA_ECOLI : 161- 168: mppmy Gqpgg-LqG lttlp GA6S_HUMAN : 42- 47: lmddm Gwgd--L-G vygep GA6S_HUMAN : 139- 144: vskiv Gkwh--L-G hrpqf GA6S_HUMAN : 301- 309: apeqg GsngpfLcG kqttf GA6S_HUMAN : 333- 340: ghvta GqvshqL-G simdl GA6S_HUMAN : 500- 505: nwapp Gcek--L-G kcltp GL6S_HUMAN : 161- 168: apdag GlehvpL-G wsywy IDS_HUMAN : 7- 14: ppprt GrgllwL-G lvlss IDS_HUMAN : 9- 14: prtgr Gllw--L-G lvlss IDS_MOUSE : 430- 436: lagla Glpvl-L-G apsll IDS_MOUSE : 430- 436: lagla Glpv--LlG apsll STS_HUMAN : 126- 133: llkdq Gysta-LiG kwhlg STS_HUMAN : 133- 138: stali Gkwh--L-G mschs STS_HUMAN : 207- 214: alncl GllhvpL-G vffsl STS_RAT : 18- 23: maddl Gigd--L-G xyg YIDJ_ECOLI : 99- 105: htcyi Gkwh--LdG hdyfg P 16: 11.0102 34( 13) G-x(2,4)-L-x(0,1)-G Occurences: 34(13) ARSA_HUMAN : 32- 37: faddl Gygd-L-G cyghp ARSA_HUMAN : 122- 127: ltgma Gkwh-L-G vgpeg ARSA_HUMAN : 140- 146: lpphq GfhrfL-G ipysh ARSA_HUMAN : 436- 443: lskdp GenynLlG gvaga ARSB_FELCA : 146- 151: tthmv Gkwh-L-G myrke ARSB_FELCA : 169- 173: fdtyf Gyl--L-G sedyy ARSB_FELCA : 304- 310: fstdn Ggqt-LaG gnnwp ARSB_FELCA : 305- 310: stdng Gqt--LaG gnnwp ARSB_FELCA : 311- 318: qtlag GnnwpLrG rkwsl ARSB_FELCA : 369- 375: rgstk Gtkp-LdG fdvwk ARSB_FELCA : 438- 445: aairh GnwklLtG ypgcg ARSB_HUMAN : 144- 149: tthmv Gkwh-L-G myrke ARSB_HUMAN : 167- 171: fdtyf Gyl--L-G sedyy ARSB_HUMAN : 302- 308: fstdn Ggqt-LaG gnnwp ARSB_HUMAN : 303- 308: stdng Gqt--LaG gnnwp ARSB_HUMAN : 309- 316: qtlag GnnwpLrG rkwsl ARSB_HUMAN : 367- 373: rghtn Gtkp-LdG fdvwk ARSB_HUMAN : 436- 443: aairh GnwklLtG ypgcg ARS_HEMPU : 155- 160: atgmv Gkwh-L-G inens ARS_KLEAE : 131- 136: ntlma Gkwh-L-G fvpga ASLA_ECOLI : 161- 168: mppmy GqpggLqG lttlp GA6S_HUMAN : 42- 47: lmddm Gwgd-L-G vygep GA6S_HUMAN : 139- 144: vskiv Gkwh-L-G hrpqf GA6S_HUMAN : 304- 309: qggsn Gpf--LcG kqttf GA6S_HUMAN : 500- 505: nwapp Gcek-L-G kcltp GL6S_HUMAN : 32- 36: lllvl Ggc--L-G vfgva IDS_HUMAN : 9- 14: prtgr Gllw-L-G lvlss IDS_HUMAN : 336- 340: ftsdh Gwa--L-G ehgew IDS_MOUSE : 351- 355: ftsdh Gwa--L-G ehgew IDS_MOUSE : 430- 436: lagla GlpvlL-G apsll IDS_MOUSE : 430- 436: lagla Glpv-LlG apsll STS_HUMAN : 126- 133: llkdq GystaLiG kwhlg STS_HUMAN : 133- 138: stali Gkwh-L-G mschs STS_RAT : 18- 23: maddl Gigd-L-G xyg YIDJ_ECOLI : 99- 105: htcyi Gkwh-LdG hdyfg Q 17: 11.0102 24( 13) D-x(0,1)-L-x(1,3)-D Occurences: 24(13) ARSA_HUMAN : 29- 35: vlifa DdLgygD lgcyg ARSA_HUMAN : 30- 35: lifad D-LgygD lgcyg ARSA_HUMAN : 207- 211: mafah D-Lma-D aqrqd ARSA_HUMAN : 249- 255: rgpfg DsLmelD aavgt ARSA_HUMAN : 430- 434: pplly D-Lsk-D pgeny ARSB_FELCA : 55- 61: vfvla DdLgwnD vsfhg ARSB_FELCA : 56- 61: fvlad D-LgwnD vsfhg ARSB_FELCA : 488- 492: peerh D-Lsr-D yphiv ARSB_HUMAN : 53- 59: vflla DdLgwnD vgfhg ARSB_HUMAN : 54- 59: fllad D-LgwnD vgfhg ARS_HEMPU : 466- 470: ppllf D-Lhr-D pgeay ARS_KLEAE : 225- 231: ftaph DpLqapD ewikr ASLA_ECOLI : 405- 408: sdgiv D-La--D lfpta GA6S_HUMAN : 274- 279: lellq D-LhvaD ntfvf GL6S_HUMAN : 202- 206: enysv DyLt--D vlanv IDS_HUMAN : 446- 450: hfrfr D-Lee-D pylpg IDS_HUMAN : 528- 532: yfvds DpLq--D hnmyn IDS_MOUSE : 541- 545: yfvds DpLq--D hnvyn STS_HUMAN : 35- 41: ilvma DdLgigD pgcyg STS_HUMAN : 36- 41: lvmad D-LgigD pgcyg STS_RAT : 15- 21: llima DdLgigD lgxyg STS_RAT : 16- 21: limad D-LgigD lgxyg YIDJ_ECOLI : 399- 403: nlfts DeLy--D rrndp YIDJ_ECOLI : 429- 433: rskmh DaLl--D ymdki R 18: 11.0102 39( 13) D-x(0,2)-L-x(3,4)-L Occurences: 39(13) ARSA_HUMAN : 29- 36: vlifa Dd-LgygdL gcygh ARSA_HUMAN : 30- 36: lifad D--LgygdL gcygh ARSA_HUMAN : 50- 57: ttpnl Dq-LaaggL rftdf ARSA_HUMAN : 173- 181: cdggc DqgLvpipL lanls ARSA_HUMAN : 267- 275: mtaig DlgLleetL vifta ARSA_HUMAN : 335- 340: lassl D--Llpt-L aalag ARSA_HUMAN : 357- 362: tldgf D--Lspl-L lgtgk ARSA_HUMAN : 357- 363: tldgf D--LspllL gtgks ARSB_FELCA : 127- 134: scvpl DekLlpq-L lkeag ARSB_FELCA : 127- 135: scvpl DekLlpqlL keagy ARSB_HUMAN : 125- 132: scvpl DekLlpq-L lkeag ARSB_HUMAN : 125- 133: scvpl DekLlpqlL keagy ARS_HEMPU : 22- 29: taqtq DpaLldl-L renpd ARS_HEMPU : 34- 39: lrenp D--Llsl-L lqsne ARS_HEMPU : 34- 40: lrenp Dl-Lsll-L qsneh ARS_HEMPU : 34- 40: lrenp D--LlsllL qsneh ARS_HEMPU : 369- 375: iataa D--LggttL ptdri ARS_HEMPU : 460- 467: cvteh DppLlfd-L hrdpg ARS_KLEAE : 265- 273: giihd DtpLphleL dkewe ASLA_ECOLI : 408- 414: ivdla D--LfptaL dlagh GA6S_HUMAN : 344- 350: lgsim D--LfttsL alagl GA6S_HUMAN : 388- 395: fyyrg Dt-LmaatL gqhka GL6S_HUMAN : 202- 208: enysv Dy-Ltdv-L anvsl GL6S_HUMAN : 206- 213: vdylt Dv-LanvsL dfldy GL6S_HUMAN : 300- 306: tllsv Dd-Lvek-L vkrle GL6S_HUMAN : 301- 306: llsvd D--Lvek-L vkrle GL6S_HUMAN : 373- 379: lvani D--LgptiL diagy IDS_HUMAN : 35- 41: anstt Da-Lnvl-L iivdd IDS_HUMAN : 45- 51: lliiv Dd-Lrps-L gcygd IDS_HUMAN : 46- 51: liivd D--Lrps-L gcygd IDS_HUMAN : 65- 72: rspni Dq-LashsL lfqna IDS_HUMAN : 175- 182: tcrgp DgeLhan-L lcpvd IDS_HUMAN : 175- 183: tcrgp DgeLhanlL cpvdv IDS_HUMAN : 543- 548: dsqgg D--Lfql-L mp IDS_MOUSE : 50- 56: gnsat Da-Lnil-L iivdd IDS_MOUSE : 60- 66: lliiv Dd-Lrps-L gcygd IDS_MOUSE : 61- 66: liivd D--Lrps-L gcygd IDS_MOUSE : 190- 197: tckgq DgkLhan-L lcpvd IDS_MOUSE : 190- 198: tckgq DgkLhanlL cpvdv STS_HUMAN : 258- 264: qpmsy Dn-Ltqr-L tveaa STS_HUMAN : 425- 430: iidgr D--Lmpl-L egksq STS_RAT : 15- 22: llima Dd-LgigdL gxyg STS_RAT : 16- 22: limad D--LgigdL gxyg YIDJ_ECOLI : 242- 250: pspvg DdgLyhhpL yfacn YIDJ_ECOLI : 243- 250: spvgd Dg-LyhhpL yfacn YIDJ_ECOLI : 388- 395: cwvtd DfkLvln-L ftsde S 19: 11.0102 32( 13) D-x(1,3)-L-x(4,5)-L Occurences: 32(13) ARSA_HUMAN : 29- 36: vlifa Dd--Lgygd-L gcygh ARSA_HUMAN : 50- 57: ttpnl Dq--Laagg-L rftdf ARSA_HUMAN : 173- 181: cdggc Dqg-Lvpip-L lanls ARSA_HUMAN : 173- 182: cdggc Dqg-LvpiplL anlsv ARSA_HUMAN : 267- 275: mtaig Dlg-Lleet-L vifta ARSA_HUMAN : 335- 343: lassl Dl--LptlaaL agapl ARSA_HUMAN : 354- 363: pnvtl DgfdLspll-L gtgks ARSB_FELCA : 75- 83: rtphl De--LaaggvL ldnyy ARSB_FELCA : 127- 135: scvpl Dek-Llpql-L keagy ARSB_FELCA : 354- 362: lihis Dw--LptlvkL argst ARSB_HUMAN : 73- 81: rtphl Da--LaaggvL ldnyy ARSB_HUMAN : 125- 133: scvpl Dek-Llpql-L keagy ARSB_HUMAN : 352- 360: lihis Dw--LptlvkL arght ARS_HEMPU : 27- 35: dpall Dl--LrenpdL lslll ARS_KLEAE : 264- 273: lgiih DdtpLphle-L dkewe ARS_KLEAE : 265- 273: giihd Dtp-Lphle-L dkewe ASLA_ECOLI : 405- 414: sdgiv DladLfpta-L dlagh GA6S_HUMAN : 119- 128: vggip DseqLlpel-L kkagy GA6S_HUMAN : 364- 373: sdrai DglnLlptl-L qgrlm GA6S_HUMAN : 364- 372: sdrai Dg--LnllptL lqgrl GA6S_HUMAN : 388- 395: fyyrg Dt--Lmaat-L gqhka GA6S_HUMAN : 434- 444: thnle DhtkLplifhL grdpg GL6S_HUMAN : 58- 67: ltddq Dev-LggmtpL kktka GL6S_HUMAN : 158- 167: eygap DaggLehvp-L gwsyw GL6S_HUMAN : 206- 213: vdylt Dv--Lanvs-L dfldy IDS_HUMAN : 65- 72: rspni Dq--Lashs-L lfqna IDS_HUMAN : 65- 73: rspni Dq--LashslL fqnaf IDS_HUMAN : 175- 183: tcrgp Dge-Lhanl-L cpvdv IDS_MOUSE : 80- 88: rspni Dq--LashsvL fqnaf IDS_MOUSE : 190- 198: tckgq Dgk-Lhanl-L cpvdv STS_HUMAN : 327- 336: ilnll DelrLandt-L iyfts STS_RAT : 15- 22: llima Dd--Lgigd-L gxyg YIDJ_ECOLI : 242- 250: pspvg Ddg-Lyhhp-L yfacn YIDJ_ECOLI : 243- 250: spvgd Dg--Lyhhp-L yfacn YIDJ_ECOLI : 330- 338: pvshi Dl--LptmmaL adiek T 20: 11.0102 37( 13) D-x(1,3)-L-x(3,4)-L Occurences: 37(13) ARSA_HUMAN : 29- 36: vlifa Dd--LgygdL gcygh ARSA_HUMAN : 50- 57: ttpnl Dq--LaaggL rftdf ARSA_HUMAN : 173- 181: cdggc Dqg-LvpipL lanls ARSA_HUMAN : 267- 275: mtaig DlglLeet-L vifta ARSA_HUMAN : 267- 275: mtaig Dlg-LleetL vifta ARSA_HUMAN : 354- 362: pnvtl DgfdLspl-L lgtgk ARSA_HUMAN : 354- 363: pnvtl DgfdLspllL gtgks ARSB_FELCA : 127- 134: scvpl Dek-Llpq-L lkeag ARSB_FELCA : 127- 135: scvpl DeklLpql-L keagy ARSB_FELCA : 127- 135: scvpl Dek-LlpqlL keagy ARSB_HUMAN : 125- 132: scvpl Dek-Llpq-L lkeag ARSB_HUMAN : 125- 133: scvpl DeklLpql-L keagy ARSB_HUMAN : 125- 133: scvpl Dek-LlpqlL keagy ARS_HEMPU : 22- 29: taqtq Dpa-Lldl-L renpd ARS_HEMPU : 34- 40: lrenp Dl--Lsll-L qsneh ARS_HEMPU : 460- 467: cvteh Dpp-Llfd-L hrdpg ARS_KLEAE : 264- 273: lgiih DdtpLphleL dkewe ARS_KLEAE : 265- 273: giihd Dtp-LphleL dkewe ARS_KLEAE : 319- 327: kqtgr DkntLlvf-L tdnga ASLA_ECOLI : 405- 414: sdgiv DladLfptaL dlagh GA6S_HUMAN : 119- 127: vggip DseqLlpe-L lkkag GA6S_HUMAN : 119- 128: vggip DseqLlpelL kkagy GA6S_HUMAN : 364- 372: sdrai DglnLlpt-L lqgrl GA6S_HUMAN : 364- 373: sdrai DglnLlptlL qgrlm GA6S_HUMAN : 388- 395: fyyrg Dt--LmaatL gqhka GL6S_HUMAN : 158- 167: eygap DaggLehvpL gwsyw GL6S_HUMAN : 202- 208: enysv Dy--Ltdv-L anvsl GL6S_HUMAN : 206- 213: vdylt Dv--LanvsL dfldy GL6S_HUMAN : 300- 306: tllsv Dd--Lvek-L vkrle GL6S_HUMAN : 392- 400: nktqm DgmsLlpi-L rgasn IDS_HUMAN : 35- 41: anstt Da--Lnvl-L iivdd IDS_HUMAN : 45- 51: lliiv Dd--Lrps-L gcygd IDS_HUMAN : 65- 72: rspni Dq--LashsL lfqna IDS_HUMAN : 175- 182: tcrgp Dge-Lhan-L lcpvd IDS_HUMAN : 175- 183: tcrgp Dge-LhanlL cpvdv IDS_MOUSE : 50- 56: gnsat Da--Lnil-L iivdd IDS_MOUSE : 60- 66: lliiv Dd--Lrps-L gcygd IDS_MOUSE : 190- 197: tckgq Dgk-Lhan-L lcpvd IDS_MOUSE : 190- 198: tckgq Dgk-LhanlL cpvdv STS_HUMAN : 258- 264: qpmsy Dn--Ltqr-L tveaa STS_HUMAN : 327- 336: ilnll DelrLandtL iyfts STS_HUMAN : 422- 430: edrii DgrdLmpl-L egksq STS_RAT : 15- 22: llima Dd--LgigdL gxyg YIDJ_ECOLI : 242- 250: pspvg Ddg-LyhhpL yfacn YIDJ_ECOLI : 243- 250: spvgd Dg--LyhhpL yfacn YIDJ_ECOLI : 387- 395: rcwvt DdfkLvln-L ftsde YIDJ_ECOLI : 388- 395: cwvtd Dfk-Lvln-L ftsde Number of patterns evaluated by Pratt:538 Total running time: 1 seconds