------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 25 sequences from file SRF PATTERN CONSERVATION: CM: min Nr of Seqs to Match 25 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename SRF.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: AGL1_ARATH 248 AGL2_ARATH 248 AGL3_ARATH 106 AGL4_ARATH 250 AGL5_ARATH 246 AGL6_ARATH 252 AG_ARATH 285 AG_BRANA 252 AP1_ARATH 255 AP3_ARATH 232 ARG1_YEAST 177 DEFA_ANTMA 227 FBP1_PETHY 210 FBP2_PETHY 224 GLOB_ANTMA 215 GLOB_TOBAC 209 MAD1_PETHY 231 MAD2_PETHY 212 MCM1_YEAST 286 MEF2_DROME 515 MEF2_HUMAN 507 MEFX_HUMAN 363 SRF_HUMAN 508 SRF_XENLA 448 YB32_YEAST 452 Pratt run started at Thu Feb 6 21:14:55 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 20.8503 25( 25) K-K-A-x-E-x(3)-L 2: 16.6802 25( 25) K-A-x-E-x(3)-L 3: 16.6802 25( 25) I-x(5)-R-x(2)-T-x(2)-K 4: 16.1802 25( 25) K-x(0,1)-R-x(2)-G-x(3)-K 5: 15.6802 25( 25) G-x(4,5)-A-x-E-x(2,3)-L 6: 15.6802 25( 25) K-x(0,1)-R-x(2)-G-x(2,3)-K 7: 15.6802 25( 25) K-x(0,1)-R-x(1,2)-G-x(3)-K 8: 15.6802 30( 25) R-x(5)-K-R-x(3,5)-K 9: 15.1802 25( 25) G-x(1,2)-K-x(1,3)-A-x-E 10: 15.1802 25( 25) R-x(2)-G-x(2,3)-K-x(0,2)-K 11: 15.1802 26( 25) N-x(0,2)-R-x(2,3)-T-x(2)-K 12: 14.6802 31( 25) R-x(3,5)-K-x(0,2)-R-x(5)-K 13: 12.5102 38( 25) E-L-x(2)-L 14: 12.5102 25( 25) R-x(2)-T-x(2)-K 15: 12.5102 42( 25) R-x(5)-K-R 16: 12.0102 33( 25) K-x(2)-E-x(3,4)-L 17: 12.0102 28( 25) A-x(0,1)-E-x(3)-L 18: 12.0102 27( 25) A-x-E-x(2,3)-V 19: 12.0102 26( 25) A-x(3,4)-V-L 20: 12.0102 42( 25) R-x(4,5)-K-K Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 108.8315 25( 25) I-x-[DN]-x(2)-[NR]-R-x-[TV]-T-[FY]-x-K-[KR]-[KR]-x(2)-[ILV]-[FILM]-K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] B 2: 98.3174 25( 25) R-x-[TV]-T-[FY]-x-K-[KR]-[KR]-x(2)-[ILV]-[FILM]-K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] C 3: 97.8156 25( 25) N-x(0,2)-R-x(2,3)-T-[FY]-x-K-[KR]-[KR]-x(2)-[ILV]-[FILM]-K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] D 4: 67.8847 25( 25) K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] E 5: 63.7146 25( 25) K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] F 6: 59.0446 25( 25) A-x(0,1)-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] G 7: 54.0807 25( 25) K-A-x-E-x(3)-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] H 8: 49.0890 25( 25) K-x(0,1)-R-x(2)-G-x-[FILM]-x-K-[AQ]-x-[EK]-[IL]-x(3)-[CT]-[DEGQ]-[ACGTV]-x-[AIV]-x(3)-[FIMV]-x-[ADGNS]-x(2)-[AGNQ]-x(3)-[AEQT]-x(2)-[ADNST] I 9: 48.5890 25( 25) K-x(0,1)-R-x(1,2)-G-x-[FILM]-x-K-[AQ]-x-[EK]-[IL]-x(3)-[CT]-[DEGQ]-[ACGTV]-x-[AIV]-x(3)-[FIMV]-x-[ADGNS]-x(2)-[AGNQ]-x(3)-[AEQT]-x(2)-[ADNST] J 10: 42.8984 25( 25) K-x(0,1)-R-x(2)-G-x(2,3)-K-x(2)-[EK]-[IL]-x(3)-[CT]-[DEGQ]-[ACGTV]-x-[AIV]-x(3)-[FIMV]-x-[ADGNS]-x(2)-[AGNQ]-x(3)-[AEQT]-x(2)-[ADNST] K 11: 36.3727 30( 25) R-x(2)-[TV]-x(2)-K-R-x(2)-[GN]-x-[FILM]-x-[KR]-[AQ]-x-[ET]-[FIL]-[AST] L 12: 31.1403 30( 25) R-x(2)-[TV]-x(2)-K-R-x(3,5)-K-x-[AN]-x-[EQ]-[ILV]-[ST] M 13: 30.0400 25( 25) R-x(3,5)-K-x(0,2)-R-x(3)-[FILMV]-x-K-K-x(2)-[ER]-[IL]-x(3)-[ACT] N 14: 28.5674 25( 25) A-x-E-x(2,3)-V-x-[CT]-x-[ACTV]-x(3)-[ILV]-x(2)-[FILMV]-x(3)-[EGNQ]-x(3)-[AEQT]-x(2)-[DNQST] O 15: 25.4180 25( 25) G-x(1,2)-K-x(1,3)-A-x-E-x-[QST]-x(2)-[ACT]-[ADGQ]-x(2)-[AIV] P 16: 23.7873 25( 25) R-x(2)-G-x(2,3)-K-x(0,2)-K-x(4)-[ST]-x-[GL]-x-[ADGQ] Q 17: 21.1582 42( 25) R-x(4,5)-K-K-x(2)-[ER]-[IL]-x(3)-[ACT] R 18: 20.1858 25( 25) G-x(4,5)-A-x-E-x(2,3)-L-x-[ADGQ]-[ACTV] S 19: 16.3342 27( 25) E-L-x(2)-L-x-[DEGQS]-x(4)-[AGILV] T 20: 13.9193 25( 25) A-x(3,4)-V-L-x-[DGQST] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 108.8315 25( 25) I-x-[DN]-x(2)-[NR]-R-x-[TV]-T-[FY]-x-K-[KR]-[KR]-x(2)-[ILV]-[FILM]-K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 26- 74: ieikr IeNttNRqVTFcKRRngLLKKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 11- 59: velkr IeNkiNRqVTFaKRRngLLKKAyELSVLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 11- 59: velkr IeNkiNRqVTFaKRRngLLKKAyELSVLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 11- 59: velkr IeNkiNRqVTFaKRRngLLKKAyELSVLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 26- 74: ieikr IeNttNRqVTFcKRRngLLKKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 11- 59: vemkr IeNkiNRqVTFsKKKkrLLKKAyELSVLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 60- 108: ieikr IeNttNRqVTFcKRRngLLKKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 27- 75: ieikr IeNttNRqVTFcKRRngLLKKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 11- 59: vqlkr IeNkiNRqVTFsKRRagLLKKAhEISVLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 11- 59: iqikr IeNqtNRqVTYsKRRngLFKKAhELTVLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 88- 136: qpiry IeNktRRhVTFsKRRhgIMKKAyELSVLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 11- 59: iqikr IeNqtNRqVTYsKRRngLFKKAhELSVLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 11- 59: ieikr IeNssNRqVTYsKRRngILKKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 11- 59: velkr IeNkiNRqVTFaKRRngLLKKAyELSVLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 11- 59: ieikr IeNssNRqVTYsKRRngIMKKAkEISVLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 11- 59: ieikr IeNssNRqVTYsKRRngILKKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 11- 59: iqikr IeNqtNRqVTYsKRRngLFKKAnELTVLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 11- 59: ieikr IeNssNRqVTYsKRRngIIKKAkEITVLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 26- 74: ieikf IeNktRRhVTFsKRKhgIMKKAfELSVLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 11- 59: iqisr ItDerNRqVTFnKRKfgVMKKAyELSVLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 11- 59: iqitr ImDerNRqVTFtKRKfgLMKKAyELSVLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 11- 59: iqisr IlDqrNRqVTFtKRKfgLMKKAyELSVLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 151- 199: ikmef IdNklRRyTTFsKRKtgIMKKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 106- 154: ikmef IdNklRRyTTFsKRKtgIMKKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 11- 59: ieiep IkDdrNRtVTFiKRKagLFKKAhELSVLCQVdIaVIIlGsnNtFYEYsS vdmsn B 2: 98.3174 25( 25) R-x-[TV]-T-[FY]-x-K-[KR]-[KR]-x(2)-[ILV]-[FILM]-K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 32- 74: enttn RqVTFcKRRngLLKKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 17- 59: enkin RqVTFaKRRngLLKKAyELSVLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 17- 59: enkin RqVTFaKRRngLLKKAyELSVLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 17- 59: enkin RqVTFaKRRngLLKKAyELSVLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 32- 74: enttn RqVTFcKRRngLLKKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 17- 59: enkin RqVTFsKKKkrLLKKAyELSVLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 66- 108: enttn RqVTFcKRRngLLKKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 33- 75: enttn RqVTFcKRRngLLKKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 17- 59: enkin RqVTFsKRRagLLKKAhEISVLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 17- 59: enqtn RqVTYsKRRngLFKKAhELTVLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 94- 136: enktr RhVTFsKRRhgIMKKAyELSVLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 17- 59: enqtn RqVTYsKRRngLFKKAhELSVLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 17- 59: enssn RqVTYsKRRngILKKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 17- 59: enkin RqVTFaKRRngLLKKAyELSVLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 17- 59: enssn RqVTYsKRRngIMKKAkEISVLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 17- 59: enssn RqVTYsKRRngILKKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 17- 59: enqtn RqVTYsKRRngLFKKAnELTVLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 17- 59: enssn RqVTYsKRRngIIKKAkEITVLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 32- 74: enktr RhVTFsKRKhgIMKKAfELSVLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 17- 59: tdern RqVTFnKRKfgVMKKAyELSVLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 17- 59: mdern RqVTFtKRKfgLMKKAyELSVLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 17- 59: ldqrn RqVTFtKRKfgLMKKAyELSVLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 157- 199: dnklr RyTTFsKRKtgIMKKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 112- 154: dnklr RyTTFsKRKtgIMKKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 17- 59: kddrn RtVTFiKRKagLFKKAhELSVLCQVdIaVIIlGsnNtFYEYsS vdmsn C 3: 97.8156 25( 25) N-x(0,2)-R-x(2,3)-T-[FY]-x-K-[KR]-[KR]-x(2)-[ILV]-[FILM]-K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 31- 74: ientt N--Rqv-TFcKRRngLLKKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 16- 59: ienki N--Rqv-TFaKRRngLLKKAyELSVLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 16- 59: ienki N--Rqv-TFaKRRngLLKKAyELSVLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 16- 59: ienki N--Rqv-TFaKRRngLLKKAyELSVLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 31- 74: ientt N--Rqv-TFcKRRngLLKKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 16- 59: ienki N--Rqv-TFsKKKkrLLKKAyELSVLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 65- 108: ientt N--Rqv-TFcKRRngLLKKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 32- 75: ientt N--Rqv-TFcKRRngLLKKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 16- 59: ienki N--Rqv-TFsKRRagLLKKAhEISVLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 16- 59: ienqt N--Rqv-TYsKRRngLFKKAhELTVLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 90- 136: iryie NktRrhvTFsKRRhgIMKKAyELSVLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 16- 59: ienqt N--Rqv-TYsKRRngLFKKAhELSVLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 16- 59: ienss N--Rqv-TYsKRRngILKKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 16- 59: ienki N--Rqv-TFaKRRngLLKKAyELSVLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 16- 59: ienss N--Rqv-TYsKRRngIMKKAkEISVLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 16- 59: ienss N--Rqv-TYsKRRngILKKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 16- 59: ienqt N--Rqv-TYsKRRngLFKKAnELTVLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 16- 59: ienss N--Rqv-TYsKRRngIIKKAkEITVLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 28- 74: ikfie NktRrhvTFsKRKhgIMKKAfELSVLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 16- 59: itder N--Rqv-TFnKRKfgVMKKAyELSVLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 16- 59: imder N--Rqv-TFtKRKfgLMKKAyELSVLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 16- 59: ildqr N--Rqv-TFtKRKfgLMKKAyELSVLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 153- 199: mefid NklRrytTFsKRKtgIMKKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 108- 154: mefid NklRrytTFsKRKtgIMKKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 16- 59: ikddr N--Rtv-TFiKRKagLFKKAhELSVLCQVdIaVIIlGsnNtFYEYsS vdmsn D 4: 67.8847 25( 25) K-K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 45- 74: rngll KKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 30- 59: rngll KKAyELSVLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 30- 59: rngll KKAyELSVLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 30- 59: rngll KKAyELSVLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 45- 74: rngll KKAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 30- 59: kkrll KKAyELSVLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 79- 108: rngll KKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 46- 75: rngll KKAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 30- 59: ragll KKAhEISVLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 30- 59: rnglf KKAhELTVLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 107- 136: rhgim KKAyELSVLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 30- 59: rnglf KKAhELSVLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 30- 59: rngil KKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 30- 59: rngll KKAyELSVLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 30- 59: rngim KKAkEISVLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 30- 59: rngil KKAkEISVLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 30- 59: rnglf KKAnELTVLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 30- 59: rngii KKAkEITVLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 45- 74: khgim KKAfELSVLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 30- 59: kfgvm KKAyELSVLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 30- 59: kfglm KKAyELSVLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 30- 59: kfglm KKAyELSVLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 170- 199: ktgim KKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 125- 154: ktgim KKAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 30- 59: kaglf KKAhELSVLCQVdIaVIIlGsnNtFYEYsS vdmsn E 5: 63.7146 25( 25) K-A-x-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 46- 74: ngllk KAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 31- 59: ngllk KAyELSVLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 31- 59: ngllk KAyELSVLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 31- 59: ngllk KAyELSVLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 46- 74: ngllk KAyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 31- 59: krllk KAyELSVLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 80- 108: ngllk KAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 47- 75: ngllk KAyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 31- 59: agllk KAhEISVLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 31- 59: nglfk KAhELTVLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 108- 136: hgimk KAyELSVLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 31- 59: nglfk KAhELSVLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 31- 59: ngilk KAkEISVLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 31- 59: ngllk KAyELSVLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 31- 59: ngimk KAkEISVLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 31- 59: ngilk KAkEISVLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 31- 59: nglfk KAnELTVLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 31- 59: ngiik KAkEITVLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 46- 74: hgimk KAfELSVLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 31- 59: fgvmk KAyELSVLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 31- 59: fglmk KAyELSVLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 31- 59: fglmk KAyELSVLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 171- 199: tgimk KAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 126- 154: tgimk KAyELSTLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 31- 59: aglfk KAhELSVLCQVdIaVIIlGsnNtFYEYsS vdmsn F 6: 59.0446 25( 25) A-x(0,1)-E-[IL]-[ST]-[TV]-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 47- 74: gllkk AyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 32- 59: gllkk AyELSVLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 32- 59: gllkk AyELSVLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 32- 59: gllkk AyELSVLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 47- 74: gllkk AyELSVLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 32- 59: rllkk AyELSVLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 81- 108: gllkk AyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 48- 75: gllkk AyELSVLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 32- 59: gllkk AhEISVLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 32- 59: glfkk AhELTVLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 109- 136: gimkk AyELSVLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 32- 59: glfkk AhELSVLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 32- 59: gilkk AkEISVLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 32- 59: gllkk AyELSVLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 32- 59: gimkk AkEISVLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 32- 59: gilkk AkEISVLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 32- 59: glfkk AnELTVLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 32- 59: giikk AkEITVLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 47- 74: gimkk AfELSVLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 32- 59: gvmkk AyELSVLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 32- 59: glmkk AyELSVLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 32- 59: glmkk AyELSVLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 172- 199: gimkk AyELSTLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 127- 154: gimkk AyELSTLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 32- 59: glfkk AhELSVLCQVdIaVIIlGsnNtFYEYsS vdmsn G 7: 54.0807 25( 25) K-A-x-E-x(3)-L-[CT]-[DGQ]-[ACTV]-x-[IV]-x-[ILV]-[ILV]-[IMV]-x-[AGNS]-x(2)-[GNQ]-x-[FLMV]-[FHY]-[EQT]-[FY]-x-[DNST] Occurences: 25(25) AGL1_ARATH : 46- 74: ngllk KAyElsvLCDAeVaLVIfStrGrLYEYaN nsvrg AGL2_ARATH : 31- 59: ngllk KAyElsvLCDAeVaLIIfSnrGkLYEFcS ssnml AGL3_ARATH : 31- 59: ngllk KAyElsvLCDAeIaLLIfSnrGkLYEFqD ylklk AGL4_ARATH : 31- 59: ngllk KAyElsvLCDAeVsLIVfSnrGkLYEFcS tsnml AGL5_ARATH : 46- 74: ngllk KAyElsvLCDAeVaLVIfStrGrLYEYaN nsvrg AGL6_ARATH : 31- 59: krllk KAyElsvLCDAeVaLIIfSsrGkLYEFgS vgies AG_ARATH : 80- 108: ngllk KAyElsvLCDAeVaLIVfSsrGrLYEYsN nsvkg AG_BRANA : 47- 75: ngllk KAyElsvLCDAeVaLIVfSsrGrLYEYsN nsvkg AP1_ARATH : 31- 59: agllk KAhEisvLCDAeVaLVVfShkGkLFEYsT dscme AP3_ARATH : 31- 59: nglfk KAhEltvLCDArVsIIMfSssNkLHEYiS pnttt ARG1_YEAST : 108- 136: hgimk KAyElsvLTGAnIlLLIlAnsGlVYTFtT pklep DEFA_ANTMA : 31- 59: nglfk KAhElsvLCDAkVsIIMiSstQkLHEYiS pttat FBP1_PETHY : 31- 59: ngilk KAkEisvLCDArVsVIIfAssGkMHEFsS tslvd FBP2_PETHY : 31- 59: ngllk KAyElsvLCDAeVaLIIfSnrGkLYEFcS sssml GLOB_ANTMA : 31- 59: ngimk KAkEisvLCDAhVsVIIfAssGkMHEFcS psttl GLOB_TOBAC : 31- 59: ngilk KAkEisvLCDArVsVIIfAssGkMHEFsS tslvd MAD1_PETHY : 31- 59: nglfk KAnEltvLCDAkVsIIMiSstGkLHEFiS psitt MAD2_PETHY : 31- 59: ngiik KAkEitvLCDAkVsLIIfGnsGkMHEYcS psttl MCM1_YEAST : 46- 74: hgimk KAfElsvLTGTqVlLLVvSetGlVYTFsT pkfep MEF2_DROME : 31- 59: fgvmk KAyElsvLCDCeIaLIIfSssNkLYQYaS tdmdr MEF2_HUMAN : 31- 59: fglmk KAyElsvLCDCeIaLIIfNssNkLFQYaS tdmdk MEFX_HUMAN : 31- 59: fglmk KAyElsvLCDCeIaLIIfNsaNrLFQYaS tdmdr SRF_HUMAN : 171- 199: tgimk KAyElstLTGTqVlLLVaSetGhVYTFaT rklqp SRF_XENLA : 126- 154: tgimk KAyElstLTGTqVlLLVaSetGhVYTFaT rklqp YB32_YEAST : 31- 59: aglfk KAhElsvLCQVdIaVIIlGsnNtFYEYsS vdmsn H 8: 49.0890 25( 25) K-x(0,1)-R-x(2)-G-x-[FILM]-x-K-[AQ]-x-[EK]-[IL]-x(3)-[CT]-[DEGQ]-[ACGTV]-x-[AIV]-x(3)-[FIMV]-x-[ADGNS]-x(2)-[AGNQ]-x(3)-[AEQT]-x(2)-[ADNST] Occurences: 25(25) AGL1_ARATH : 38- 74: qvtfc K-RrnGlLkKAyELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL2_ARATH : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeValiIfSnrGklyEfcS ssnml AGL3_ARATH : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeIallIfSnrGklyEfqD ylklk AGL4_ARATH : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeVsliVfSnrGklyEfcS tsnml AGL5_ARATH : 38- 74: qvtfc K-RrnGlLkKAyELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL6_ARATH : 155- 192: edlrk KeRqlGdInKQlKIkfeTEGhAfktFqDlwAnsaAsvA gdpnn AG_ARATH : 72- 108: qvtfc K-RrnGlLkKAyELsvlCDAeValiVfSsrGrlyEysN nsvkg AG_BRANA : 39- 75: qvtfc K-RrnGlLkKAyELsvlCDAeValiVfSsrGrlyEysN nsvkg AP1_ARATH : 23- 59: qvtfs K-RraGlLkKAhEIsvlCDAeValvVfShkGklfEysT dscme AP3_ARATH : 23- 59: qvtys K-RrnGlFkKAhELtvlCDArVsiiMfSssNklhEyiS pnttt ARG1_YEAST : 100- 136: hvtfs K-RrhGiMkKAyELsvlTGAnIlllIlAnsGlvyTftT pklep DEFA_ANTMA : 23- 59: qvtys K-RrnGlFkKAhELsvlCDAkVsiiMiSstQklhEyiS pttat FBP1_PETHY : 23- 59: qvtys K-RrnGiLkKAkEIsvlCDArVsviIfAssGkmhEfsS tslvd FBP2_PETHY : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeValiIfSnrGklyEfcS sssml GLOB_ANTMA : 23- 59: qvtys K-RrnGiMkKAkEIsvlCDAhVsviIfAssGkmhEfcS psttl GLOB_TOBAC : 23- 59: qvtys K-RrnGiLkKAkEIsvlCDArVsviIfAssGkmhEfsS tslvd MAD1_PETHY : 23- 59: qvtys K-RrnGlFkKAnELtvlCDAkVsiiMiSstGklhEfiS psitt MAD2_PETHY : 23- 59: qvtys K-RrnGiIkKAkEItvlCDAkVsliIfGnsGkmhEycS psttl MCM1_YEAST : 38- 74: hvtfs K-RkhGiMkKAfELsvlTGTqVlllVvSetGlvyTfsT pkfep MEF2_DROME : 23- 59: qvtfn K-RkfGvMkKAyELsvlCDCeIaliIfSssNklyQyaS tdmdr MEF2_HUMAN : 23- 59: qvtft K-RkfGlMkKAyELsvlCDCeIaliIfNssNklfQyaS tdmdk MEFX_HUMAN : 23- 59: qvtft K-RkfGlMkKAyELsvlCDCeIaliIfNsaNrlfQyaS tdmdr SRF_HUMAN : 163- 199: yttfs K-RktGiMkKAyELstlTGTqVlllVaSetGhvyTfaT rklqp SRF_XENLA : 118- 154: yttfs K-RktGiMkKAyELstlTGTqVlllVaSetGhvyTfaT rklqp YB32_YEAST : 23- 59: tvtfi K-RkaGlFkKAhELsvlCQVdIaviIlGsnNtfyEysS vdmsn I 9: 48.5890 25( 25) K-x(0,1)-R-x(1,2)-G-x-[FILM]-x-K-[AQ]-x-[EK]-[IL]-x(3)-[CT]-[DEGQ]-[ACGTV]-x-[AIV]-x(3)-[FIMV]-x-[ADGNS]-x(2)-[AGNQ]-x(3)-[AEQT]-x(2)-[ADNST] Occurences: 25(25) AGL1_ARATH : 38- 74: qvtfc KrRn-GlLkKAyELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL1_ARATH : 38- 74: qvtfc K-RrnGlLkKAyELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL2_ARATH : 23- 59: qvtfa KrRn-GlLkKAyELsvlCDAeValiIfSnrGklyEfcS ssnml AGL2_ARATH : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeValiIfSnrGklyEfcS ssnml AGL3_ARATH : 23- 59: qvtfa KrRn-GlLkKAyELsvlCDAeIallIfSnrGklyEfqD ylklk AGL3_ARATH : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeIallIfSnrGklyEfqD ylklk AGL4_ARATH : 23- 59: qvtfa KrRn-GlLkKAyELsvlCDAeVsliVfSnrGklyEfcS tsnml AGL4_ARATH : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeVsliVfSnrGklyEfcS tsnml AGL5_ARATH : 38- 74: qvtfc KrRn-GlLkKAyELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL5_ARATH : 38- 74: qvtfc K-RrnGlLkKAyELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL6_ARATH : 155- 192: edlrk KeRqlGdInKQlKIkfeTEGhAfktFqDlwAnsaAsvA gdpnn AG_ARATH : 72- 108: qvtfc KrRn-GlLkKAyELsvlCDAeValiVfSsrGrlyEysN nsvkg AG_ARATH : 72- 108: qvtfc K-RrnGlLkKAyELsvlCDAeValiVfSsrGrlyEysN nsvkg AG_BRANA : 39- 75: qvtfc KrRn-GlLkKAyELsvlCDAeValiVfSsrGrlyEysN nsvkg AG_BRANA : 39- 75: qvtfc K-RrnGlLkKAyELsvlCDAeValiVfSsrGrlyEysN nsvkg AP1_ARATH : 23- 59: qvtfs KrRa-GlLkKAhEIsvlCDAeValvVfShkGklfEysT dscme AP1_ARATH : 23- 59: qvtfs K-RraGlLkKAhEIsvlCDAeValvVfShkGklfEysT dscme AP3_ARATH : 23- 59: qvtys KrRn-GlFkKAhELtvlCDArVsiiMfSssNklhEyiS pnttt AP3_ARATH : 23- 59: qvtys K-RrnGlFkKAhELtvlCDArVsiiMfSssNklhEyiS pnttt ARG1_YEAST : 100- 136: hvtfs KrRh-GiMkKAyELsvlTGAnIlllIlAnsGlvyTftT pklep ARG1_YEAST : 100- 136: hvtfs K-RrhGiMkKAyELsvlTGAnIlllIlAnsGlvyTftT pklep DEFA_ANTMA : 23- 59: qvtys KrRn-GlFkKAhELsvlCDAkVsiiMiSstQklhEyiS pttat DEFA_ANTMA : 23- 59: qvtys K-RrnGlFkKAhELsvlCDAkVsiiMiSstQklhEyiS pttat FBP1_PETHY : 23- 59: qvtys KrRn-GiLkKAkEIsvlCDArVsviIfAssGkmhEfsS tslvd FBP1_PETHY : 23- 59: qvtys K-RrnGiLkKAkEIsvlCDArVsviIfAssGkmhEfsS tslvd FBP2_PETHY : 23- 59: qvtfa KrRn-GlLkKAyELsvlCDAeValiIfSnrGklyEfcS sssml FBP2_PETHY : 23- 59: qvtfa K-RrnGlLkKAyELsvlCDAeValiIfSnrGklyEfcS sssml GLOB_ANTMA : 23- 59: qvtys KrRn-GiMkKAkEIsvlCDAhVsviIfAssGkmhEfcS psttl GLOB_ANTMA : 23- 59: qvtys K-RrnGiMkKAkEIsvlCDAhVsviIfAssGkmhEfcS psttl GLOB_TOBAC : 23- 59: qvtys KrRn-GiLkKAkEIsvlCDArVsviIfAssGkmhEfsS tslvd GLOB_TOBAC : 23- 59: qvtys K-RrnGiLkKAkEIsvlCDArVsviIfAssGkmhEfsS tslvd MAD1_PETHY : 23- 59: qvtys KrRn-GlFkKAnELtvlCDAkVsiiMiSstGklhEfiS psitt MAD1_PETHY : 23- 59: qvtys K-RrnGlFkKAnELtvlCDAkVsiiMiSstGklhEfiS psitt MAD2_PETHY : 23- 59: qvtys KrRn-GiIkKAkEItvlCDAkVsliIfGnsGkmhEycS psttl MAD2_PETHY : 23- 59: qvtys K-RrnGiIkKAkEItvlCDAkVsliIfGnsGkmhEycS psttl MCM1_YEAST : 38- 74: hvtfs K-RkhGiMkKAfELsvlTGTqVlllVvSetGlvyTfsT pkfep MEF2_DROME : 23- 59: qvtfn K-RkfGvMkKAyELsvlCDCeIaliIfSssNklyQyaS tdmdr MEF2_HUMAN : 23- 59: qvtft K-RkfGlMkKAyELsvlCDCeIaliIfNssNklfQyaS tdmdk MEFX_HUMAN : 23- 59: qvtft K-RkfGlMkKAyELsvlCDCeIaliIfNsaNrlfQyaS tdmdr SRF_HUMAN : 163- 199: yttfs K-RktGiMkKAyELstlTGTqVlllVaSetGhvyTfaT rklqp SRF_XENLA : 118- 154: yttfs K-RktGiMkKAyELstlTGTqVlllVaSetGhvyTfaT rklqp YB32_YEAST : 23- 59: tvtfi K-RkaGlFkKAhELsvlCQVdIaviIlGsnNtfyEysS vdmsn J 10: 42.8984 25( 25) K-x(0,1)-R-x(2)-G-x(2,3)-K-x(2)-[EK]-[IL]-x(3)-[CT]-[DEGQ]-[ACGTV]-x-[AIV]-x(3)-[FIMV]-x-[ADGNS]-x(2)-[AGNQ]-x(3)-[AEQT]-x(2)-[ADNST] Occurences: 25(25) AGL1_ARATH : 38- 74: qvtfc K-RrnGllkKayELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL2_ARATH : 23- 59: qvtfa K-RrnGllkKayELsvlCDAeValiIfSnrGklyEfcS ssnml AGL3_ARATH : 23- 59: qvtfa K-RrnGllkKayELsvlCDAeIallIfSnrGklyEfqD ylklk AGL4_ARATH : 23- 59: qvtfa K-RrnGllkKayELsvlCDAeVsliVfSnrGklyEfcS tsnml AGL5_ARATH : 38- 74: qvtfc K-RrnGllkKayELsvlCDAeValvIfStrGrlyEyaN nsvrg AGL6_ARATH : 155- 192: edlrk KeRqlGdinKqlKIkfeTEGhAfktFqDlwAnsaAsvA gdpnn AG_ARATH : 72- 108: qvtfc K-RrnGllkKayELsvlCDAeValiVfSsrGrlyEysN nsvkg AG_BRANA : 39- 75: qvtfc K-RrnGllkKayELsvlCDAeValiVfSsrGrlyEysN nsvkg AP1_ARATH : 23- 59: qvtfs K-RraGllkKahEIsvlCDAeValvVfShkGklfEysT dscme AP3_ARATH : 23- 59: qvtys K-RrnGlfkKahELtvlCDArVsiiMfSssNklhEyiS pnttt ARG1_YEAST : 100- 136: hvtfs K-RrhGimkKayELsvlTGAnIlllIlAnsGlvyTftT pklep DEFA_ANTMA : 23- 59: qvtys K-RrnGlfkKahELsvlCDAkVsiiMiSstQklhEyiS pttat FBP1_PETHY : 23- 59: qvtys K-RrnGilkKakEIsvlCDArVsviIfAssGkmhEfsS tslvd FBP2_PETHY : 23- 59: qvtfa K-RrnGllkKayELsvlCDAeValiIfSnrGklyEfcS sssml GLOB_ANTMA : 23- 59: qvtys K-RrnGimkKakEIsvlCDAhVsviIfAssGkmhEfcS psttl GLOB_TOBAC : 23- 59: qvtys K-RrnGilkKakEIsvlCDArVsviIfAssGkmhEfsS tslvd MAD1_PETHY : 23- 59: qvtys K-RrnGlfkKanELtvlCDAkVsiiMiSstGklhEfiS psitt MAD2_PETHY : 23- 59: qvtys K-RrnGiikKakEItvlCDAkVsliIfGnsGkmhEycS psttl MCM1_YEAST : 38- 74: hvtfs K-RkhGimkKafELsvlTGTqVlllVvSetGlvyTfsT pkfep MEF2_DROME : 23- 59: qvtfn K-RkfGvmkKayELsvlCDCeIaliIfSssNklyQyaS tdmdr MEF2_HUMAN : 23- 59: qvtft K-RkfGlmkKayELsvlCDCeIaliIfNssNklfQyaS tdmdk MEFX_HUMAN : 23- 59: qvtft K-RkfGlmkKayELsvlCDCeIaliIfNsaNrlfQyaS tdmdr SRF_HUMAN : 163- 199: yttfs K-RktGimkKayELstlTGTqVlllVaSetGhvyTfaT rklqp SRF_XENLA : 118- 154: yttfs K-RktGimkKayELstlTGTqVlllVaSetGhvyTfaT rklqp YB32_YEAST : 23- 59: tvtfi K-RkaGlfkKahELsvlCQVdIaviIlGsnNtfyEysS vdmsn K 11: 36.3727 30( 25) R-x(2)-[TV]-x(2)-K-R-x(2)-[GN]-x-[FILM]-x-[KR]-[AQ]-x-[ET]-[FIL]-[AST] Occurences: 30(25) AGL1_ARATH : 32- 51: enttn RqvTfcKRrnGlLkKAyELS vlcda AGL2_ARATH : 3- 22: mg RgrVelKRieNkInRQvTFA krrng AGL2_ARATH : 17- 36: enkin RqvTfaKRrnGlLkKAyELS vlcda AGL3_ARATH : 3- 22: mg RgkVelKRieNkInRQvTFA krrng AGL3_ARATH : 17- 36: enkin RqvTfaKRrnGlLkKAyELS vlcda AGL4_ARATH : 3- 22: mg RgrVelKRieNkInRQvTFA krrng AGL4_ARATH : 17- 36: enkin RqvTfaKRrnGlLkKAyELS vlcda AGL5_ARATH : 32- 51: enttn RqvTfcKRrnGlLkKAyELS vlcda AGL6_ARATH : 3- 22: mg RgrVemKRieNkInRQvTFS kkkkr AG_ARATH : 66- 85: enttn RqvTfcKRrnGlLkKAyELS vlcda AG_BRANA : 33- 52: enttn RqvTfcKRrnGlLkKAyELS vlcda AP1_ARATH : 3- 22: mg RgrVqlKRieNkInRQvTFS krrag AP1_ARATH : 17- 36: enkin RqvTfsKRraGlLkKAhEIS vlcda AP3_ARATH : 17- 36: enqtn RqvTysKRrnGlFkKAhELT vlcda ARG1_YEAST : 94- 113: enktr RhvTfsKRrhGiMkKAyELS vltga DEFA_ANTMA : 17- 36: enqtn RqvTysKRrnGlFkKAhELS vlcda FBP1_PETHY : 17- 36: enssn RqvTysKRrnGiLkKAkEIS vlcda FBP2_PETHY : 3- 22: mg RgrVelKRieNkInRQvTFA krrng FBP2_PETHY : 17- 36: enkin RqvTfaKRrnGlLkKAyELS vlcda GLOB_ANTMA : 17- 36: enssn RqvTysKRrnGiMkKAkEIS vlcda GLOB_TOBAC : 17- 36: enssn RqvTysKRrnGiLkKAkEIS vlcda MAD1_PETHY : 17- 36: enqtn RqvTysKRrnGlFkKAnELT vlcda MAD2_PETHY : 17- 36: enssn RqvTysKRrnGiIkKAkEIT vlcda MCM1_YEAST : 32- 51: enktr RhvTfsKRkhGiMkKAfELS vltgt MEF2_DROME : 17- 36: tdern RqvTfnKRkfGvMkKAyELS vlcdc MEF2_HUMAN : 17- 36: mdern RqvTftKRkfGlMkKAyELS vlcdc MEFX_HUMAN : 17- 36: ldqrn RqvTftKRkfGlMkKAyELS vlcdc SRF_HUMAN : 157- 176: dnklr RytTfsKRktGiMkKAyELS tltgt SRF_XENLA : 112- 131: dnklr RytTfsKRktGiMkKAyELS tltgt YB32_YEAST : 17- 36: kddrn RtvTfiKRkaGlFkKAhELS vlcqv L 12: 31.1403 30( 25) R-x(2)-[TV]-x(2)-K-R-x(3,5)-K-x-[AN]-x-[EQ]-[ILV]-[ST] Occurences: 30(25) AGL1_ARATH : 32- 51: enttn RqvTfcKRrngllKkAyELS vlcda AGL2_ARATH : 3- 20: mg RgrVelKRien--KiNrQVT fakrr AGL2_ARATH : 17- 36: enkin RqvTfaKRrngllKkAyELS vlcda AGL3_ARATH : 3- 20: mg RgkVelKRien--KiNrQVT fakrr AGL3_ARATH : 17- 36: enkin RqvTfaKRrngllKkAyELS vlcda AGL4_ARATH : 3- 20: mg RgrVelKRien--KiNrQVT fakrr AGL4_ARATH : 17- 36: enkin RqvTfaKRrngllKkAyELS vlcda AGL5_ARATH : 32- 51: enttn RqvTfcKRrngllKkAyELS vlcda AGL6_ARATH : 3- 20: mg RgrVemKRien--KiNrQVT fskkk AG_ARATH : 66- 85: enttn RqvTfcKRrngllKkAyELS vlcda AG_BRANA : 33- 52: enttn RqvTfcKRrngllKkAyELS vlcda AP1_ARATH : 3- 20: mg RgrVqlKRien--KiNrQVT fskrr AP1_ARATH : 17- 36: enkin RqvTfsKRragllKkAhEIS vlcda AP3_ARATH : 17- 36: enqtn RqvTysKRrnglfKkAhELT vlcda ARG1_YEAST : 94- 113: enktr RhvTfsKRrhgimKkAyELS vltga DEFA_ANTMA : 17- 36: enqtn RqvTysKRrnglfKkAhELS vlcda FBP1_PETHY : 17- 36: enssn RqvTysKRrngilKkAkEIS vlcda FBP2_PETHY : 3- 20: mg RgrVelKRien--KiNrQVT fakrr FBP2_PETHY : 17- 36: enkin RqvTfaKRrngllKkAyELS vlcda GLOB_ANTMA : 17- 36: enssn RqvTysKRrngimKkAkEIS vlcda GLOB_TOBAC : 17- 36: enssn RqvTysKRrngilKkAkEIS vlcda MAD1_PETHY : 17- 36: enqtn RqvTysKRrnglfKkAnELT vlcda MAD2_PETHY : 17- 36: enssn RqvTysKRrngiiKkAkEIT vlcda MCM1_YEAST : 32- 51: enktr RhvTfsKRkhgimKkAfELS vltgt MEF2_DROME : 17- 36: tdern RqvTfnKRkfgvmKkAyELS vlcdc MEF2_HUMAN : 17- 36: mdern RqvTftKRkfglmKkAyELS vlcdc MEFX_HUMAN : 17- 36: ldqrn RqvTftKRkfglmKkAyELS vlcdc SRF_HUMAN : 157- 176: dnklr RytTfsKRktgimKkAyELS tltgt SRF_XENLA : 112- 131: dnklr RytTfsKRktgimKkAyELS tltgt YB32_YEAST : 17- 36: kddrn RtvTfiKRkaglfKkAhELS vlcqv M 13: 30.0400 25( 25) R-x(3,5)-K-x(0,2)-R-x(3)-[FILMV]-x-K-K-x(2)-[ER]-[IL]-x(3)-[ACT] Occurences: 25(25) AGL1_ARATH : 32- 54: enttn RqvtfcK--RrngLlKKayELsvlC daeva AGL2_ARATH : 17- 39: enkin RqvtfaK--RrngLlKKayELsvlC daeva AGL3_ARATH : 17- 39: enkin RqvtfaK--RrngLlKKayELsvlC daeia AGL4_ARATH : 17- 39: enkin RqvtfaK--RrngLlKKayELsvlC daevs AGL5_ARATH : 32- 54: enttn RqvtfcK--RrngLlKKayELsvlC daeva AGL6_ARATH : 10- 32: rvemk Rien--KinRqvtFsKKkkRLlkkA yelsv AG_ARATH : 66- 88: enttn RqvtfcK--RrngLlKKayELsvlC daeva AG_BRANA : 33- 55: enttn RqvtfcK--RrngLlKKayELsvlC daeva AP1_ARATH : 17- 39: enkin RqvtfsK--RragLlKKahEIsvlC daeva AP3_ARATH : 17- 39: enqtn RqvtysK--RrngLfKKahELtvlC darvs ARG1_YEAST : 94- 116: enktr RhvtfsK--RrhgImKKayELsvlT ganil DEFA_ANTMA : 17- 39: enqtn RqvtysK--RrngLfKKahELsvlC dakvs FBP1_PETHY : 17- 39: enssn RqvtysK--RrngIlKKakEIsvlC darvs FBP2_PETHY : 17- 39: enkin RqvtfaK--RrngLlKKayELsvlC daeva GLOB_ANTMA : 17- 39: enssn RqvtysK--RrngImKKakEIsvlC dahvs GLOB_TOBAC : 17- 39: enssn RqvtysK--RrngIlKKakEIsvlC darvs MAD1_PETHY : 17- 39: enqtn RqvtysK--RrngLfKKanELtvlC dakvs MAD2_PETHY : 17- 39: enssn RqvtysK--RrngIiKKakEItvlC dakvs MCM1_YEAST : 32- 54: enktr RhvtfsK--RkhgImKKafELsvlT gtqvl MEF2_DROME : 17- 39: tdern RqvtfnK--RkfgVmKKayELsvlC dceia MEF2_HUMAN : 17- 39: mdern RqvtftK--RkfgLmKKayELsvlC dceia MEFX_HUMAN : 17- 39: ldqrn RqvtftK--RkfgLmKKayELsvlC dceia SRF_HUMAN : 157- 179: dnklr RyttfsK--RktgImKKayELstlT gtqvl SRF_XENLA : 112- 134: dnklr RyttfsK--RktgImKKayELstlT gtqvl YB32_YEAST : 17- 39: kddrn RtvtfiK--RkagLfKKahELsvlC qvdia N 14: 28.5674 25( 25) A-x-E-x(2,3)-V-x-[CT]-x-[ACTV]-x(3)-[ILV]-x(2)-[FILMV]-x(3)-[EGNQ]-x(3)-[AEQT]-x(2)-[DNQST] Occurences: 25(25) AGL1_ARATH : 47- 74: gllkk AyEls-VlCdAevaLviFstrGrlyEyaN nsvrg AGL2_ARATH : 32- 59: gllkk AyEls-VlCdAevaLiiFsnrGklyEfcS ssnml AGL3_ARATH : 32- 59: gllkk AyEls-VlCdAeiaLliFsnrGklyEfqD ylklk AGL4_ARATH : 32- 59: gllkk AyEls-VlCdAevsLivFsnrGklyEfcS tsnml AGL5_ARATH : 47- 74: gllkk AyEls-VlCdAevaLviFstrGrlyEyaN nsvrg AGL6_ARATH : 32- 59: rllkk AyEls-VlCdAevaLiiFssrGklyEfgS vgies AG_ARATH : 81- 108: gllkk AyEls-VlCdAevaLivFssrGrlyEysN nsvkg AG_BRANA : 48- 75: gllkk AyEls-VlCdAevaLivFssrGrlyEysN nsvkg AP1_ARATH : 32- 59: gllkk AhEis-VlCdAevaLvvFshkGklfEysT dscme AP3_ARATH : 32- 59: glfkk AhElt-VlCdArvsIimFsssNklhEyiS pnttt ARG1_YEAST : 109- 136: gimkk AyEls-VlTgAnilLliLansGlvyTftT pklep DEFA_ANTMA : 32- 59: glfkk AhEls-VlCdAkvsIimIsstQklhEyiS pttat FBP1_PETHY : 32- 59: gilkk AkEis-VlCdArvsViiFassGkmhEfsS tslvd FBP2_PETHY : 32- 59: gllkk AyEls-VlCdAevaLiiFsnrGklyEfcS sssml GLOB_ANTMA : 32- 59: gimkk AkEis-VlCdAhvsViiFassGkmhEfcS psttl GLOB_TOBAC : 32- 59: gilkk AkEis-VlCdArvsViiFassGkmhEfsS tslvd MAD1_PETHY : 32- 59: glfkk AnElt-VlCdAkvsIimIsstGklhEfiS psitt MAD2_PETHY : 32- 59: giikk AkEit-VlCdAkvsLiiFgnsGkmhEycS psttl MCM1_YEAST : 47- 74: gimkk AfEls-VlTgTqvlLlvVsetGlvyTfsT pkfep MEF2_DROME : 32- 59: gvmkk AyEls-VlCdCeiaLiiFsssNklyQyaS tdmdr MEF2_HUMAN : 32- 59: glmkk AyEls-VlCdCeiaLiiFnssNklfQyaS tdmdk MEFX_HUMAN : 32- 59: glmkk AyEls-VlCdCeiaLiiFnsaNrlfQyaS tdmdr SRF_HUMAN : 188- 216: vlllv AsEtghVyTfAtrkLqpMitsEtgkAliQ tclns SRF_XENLA : 143- 171: vlllv AsEtghVyTfAtrkLqpMitsEtgkAliQ tclns YB32_YEAST : 32- 59: glfkk AhEls-VlCqVdiaViiLgsnNtfyEysS vdmsn O 15: 25.4180 25( 25) G-x(1,2)-K-x(1,3)-A-x-E-x-[QST]-x(2)-[ACT]-[ADGQ]-x(2)-[AIV] Occurences: 25(25) AGL1_ARATH : 42- 58: ckrrn GllKk--AyElSvlCDaeV alvif AGL2_ARATH : 27- 43: akrrn GllKk--AyElSvlCDaeV aliif AGL3_ARATH : 27- 43: akrrn GllKk--AyElSvlCDaeI allif AGL4_ARATH : 27- 43: akrrn GllKk--AyElSvlCDaeV slivf AGL5_ARATH : 42- 58: ckrrn GllKk--AyElSvlCDaeV alvif AGL6_ARATH : 119- 136: dlgem Gv-KelqAlErQleAAltA trqrk AG_ARATH : 76- 92: ckrrn GllKk--AyElSvlCDaeV alivf AG_BRANA : 43- 59: ckrrn GllKk--AyElSvlCDaeV alivf AP1_ARATH : 27- 43: skrra GllKk--AhEiSvlCDaeV alvvf AP3_ARATH : 27- 43: skrrn GlfKk--AhElTvlCDarV siimf ARG1_YEAST : 104- 120: skrrh GimKk--AyElSvlTGanI lllil DEFA_ANTMA : 27- 43: skrrn GlfKk--AhElSvlCDakV siimi FBP1_PETHY : 27- 43: skrrn GilKk--AkEiSvlCDarV sviif FBP2_PETHY : 27- 43: akrrn GllKk--AyElSvlCDaeV aliif GLOB_ANTMA : 27- 43: skrrn GimKk--AkEiSvlCDahV sviif GLOB_TOBAC : 27- 43: skrrn GilKk--AkEiSvlCDarV sviif MAD1_PETHY : 27- 43: skrrn GlfKk--AnElTvlCDakV siimi MAD2_PETHY : 27- 43: skrrn GiiKk--AkEiTvlCDakV sliif MCM1_YEAST : 42- 58: skrkh GimKk--AfElSvlTGtqV lllvv MEF2_DROME : 27- 43: nkrkf GvmKk--AyElSvlCDceI aliif MEF2_HUMAN : 27- 43: tkrkf GlmKk--AyElSvlCDceI aliif MEFX_HUMAN : 27- 43: tkrkf GlmKk--AyElSvlCDceI aliif SRF_HUMAN : 167- 183: skrkt GimKk--AyElStlTGtqV lllva SRF_XENLA : 122- 138: skrkt GimKk--AyElStlTGtqV lllva YB32_YEAST : 27- 43: ikrka GlfKk--AhElSvlCQvdI aviil P 16: 23.7873 25( 25) R-x(2)-G-x(2,3)-K-x(0,2)-K-x(4)-[ST]-x-[GL]-x-[ADGQ] Occurences: 25(25) AGL1_ARATH : 39- 55: vtfck RrnGll-K--KayelSvLcD aeval AGL2_ARATH : 24- 40: vtfak RrnGll-K--KayelSvLcD aeval AGL3_ARATH : 24- 40: vtfak RrnGll-K--KayelSvLcD aeial AGL4_ARATH : 24- 40: vtfak RrnGll-K--KayelSvLcD aevsl AGL5_ARATH : 39- 55: vtfck RrnGll-K--KayelSvLcD aeval AGL6_ARATH : 157- 176: lrkke RqlGdinKqlKikfeTeGhA fktfq AG_ARATH : 73- 89: vtfck RrnGll-K--KayelSvLcD aeval AG_BRANA : 40- 56: vtfck RrnGll-K--KayelSvLcD aeval AP1_ARATH : 24- 40: vtfsk RraGll-K--KaheiSvLcD aeval AP3_ARATH : 24- 40: vtysk RrnGlf-K--KahelTvLcD arvsi ARG1_YEAST : 101- 117: vtfsk RrhGim-K--KayelSvLtG anill DEFA_ANTMA : 24- 40: vtysk RrnGlf-K--KahelSvLcD akvsi FBP1_PETHY : 24- 40: vtysk RrnGil-K--KakeiSvLcD arvsv FBP2_PETHY : 24- 40: vtfak RrnGll-K--KayelSvLcD aeval GLOB_ANTMA : 24- 40: vtysk RrnGim-K--KakeiSvLcD ahvsv GLOB_TOBAC : 24- 40: vtysk RrnGil-K--KakeiSvLcD arvsv MAD1_PETHY : 24- 40: vtysk RrnGlf-K--KanelTvLcD akvsi MAD2_PETHY : 24- 40: vtysk RrnGii-K--KakeiTvLcD akvsl MCM1_YEAST : 39- 55: vtfsk RkhGim-K--KafelSvLtG tqvll MEF2_DROME : 24- 40: vtfnk RkfGvm-K--KayelSvLcD ceial MEF2_HUMAN : 24- 40: vtftk RkfGlm-K--KayelSvLcD ceial MEFX_HUMAN : 24- 40: vtftk RkfGlm-K--KayelSvLcD ceial SRF_HUMAN : 164- 180: ttfsk RktGim-K--KayelStLtG tqvll SRF_XENLA : 119- 135: ttfsk RktGim-K--KayelStLtG tqvll YB32_YEAST : 24- 40: vtfik RkaGlf-K--KahelSvLcQ vdiav Q 17: 21.1582 42( 25) R-x(4,5)-K-K-x(2)-[ER]-[IL]-x(3)-[ACT] Occurences: 42(25) AGL1_ARATH : 39- 54: vtfck RrngllKKayELsvlC daeva AGL1_ARATH : 40- 54: tfckr Rngll-KKayELsvlC daeva AGL2_ARATH : 24- 39: vtfak RrngllKKayELsvlC daeva AGL2_ARATH : 25- 39: tfakr Rngll-KKayELsvlC daeva AGL3_ARATH : 24- 39: vtfak RrngllKKayELsvlC daeia AGL3_ARATH : 25- 39: tfakr Rngll-KKayELsvlC daeia AGL4_ARATH : 24- 39: vtfak RrngllKKayELsvlC daevs AGL4_ARATH : 25- 39: tfakr Rngll-KKayELsvlC daevs AGL5_ARATH : 39- 54: vtfck RrngllKKayELsvlC daeva AGL5_ARATH : 40- 54: tfckr Rngll-KKayELsvlC daeva AGL6_ARATH : 17- 32: enkin RqvtfsKKkkRLlkkA yelsv AG_ARATH : 73- 88: vtfck RrngllKKayELsvlC daeva AG_ARATH : 74- 88: tfckr Rngll-KKayELsvlC daeva AG_BRANA : 40- 55: vtfck RrngllKKayELsvlC daeva AG_BRANA : 41- 55: tfckr Rngll-KKayELsvlC daeva AP1_ARATH : 24- 39: vtfsk RragllKKahEIsvlC daeva AP1_ARATH : 25- 39: tfskr Ragll-KKahEIsvlC daeva AP3_ARATH : 24- 39: vtysk RrnglfKKahELtvlC darvs AP3_ARATH : 25- 39: tyskr Rnglf-KKahELtvlC darvs ARG1_YEAST : 101- 116: vtfsk RrhgimKKayELsvlT ganil ARG1_YEAST : 102- 116: tfskr Rhgim-KKayELsvlT ganil DEFA_ANTMA : 24- 39: vtysk RrnglfKKahELsvlC dakvs DEFA_ANTMA : 25- 39: tyskr Rnglf-KKahELsvlC dakvs FBP1_PETHY : 24- 39: vtysk RrngilKKakEIsvlC darvs FBP1_PETHY : 25- 39: tyskr Rngil-KKakEIsvlC darvs FBP2_PETHY : 24- 39: vtfak RrngllKKayELsvlC daeva FBP2_PETHY : 25- 39: tfakr Rngll-KKayELsvlC daeva GLOB_ANTMA : 24- 39: vtysk RrngimKKakEIsvlC dahvs GLOB_ANTMA : 25- 39: tyskr Rngim-KKakEIsvlC dahvs GLOB_TOBAC : 24- 39: vtysk RrngilKKakEIsvlC darvs GLOB_TOBAC : 25- 39: tyskr Rngil-KKakEIsvlC darvs MAD1_PETHY : 24- 39: vtysk RrnglfKKanELtvlC dakvs MAD1_PETHY : 25- 39: tyskr Rnglf-KKanELtvlC dakvs MAD2_PETHY : 24- 39: vtysk RrngiiKKakEItvlC dakvs MAD2_PETHY : 25- 39: tyskr Rngii-KKakEItvlC dakvs MCM1_YEAST : 39- 54: vtfsk RkhgimKKafELsvlT gtqvl MEF2_DROME : 24- 39: vtfnk RkfgvmKKayELsvlC dceia MEF2_HUMAN : 24- 39: vtftk RkfglmKKayELsvlC dceia MEFX_HUMAN : 24- 39: vtftk RkfglmKKayELsvlC dceia SRF_HUMAN : 164- 179: ttfsk RktgimKKayELstlT gtqvl SRF_XENLA : 119- 134: ttfsk RktgimKKayELstlT gtqvl YB32_YEAST : 24- 39: vtfik RkaglfKKahELsvlC qvdia R 18: 20.1858 25( 25) G-x(4,5)-A-x-E-x(2,3)-L-x-[ADGQ]-[ACTV] Occurences: 25(25) AGL1_ARATH : 42- 56: ckrrn Gllkk-AyElsvLcDA evalv AGL2_ARATH : 27- 41: akrrn Gllkk-AyElsvLcDA evali AGL3_ARATH : 27- 41: akrrn Gllkk-AyElsvLcDA eiall AGL4_ARATH : 27- 41: akrrn Gllkk-AyElsvLcDA evsli AGL5_ARATH : 42- 56: ckrrn Gllkk-AyElsvLcDA evalv AGL6_ARATH : 119- 133: dlgem GvkelqAlErq-LeAA ltatr AG_ARATH : 76- 90: ckrrn Gllkk-AyElsvLcDA evali AG_BRANA : 43- 57: ckrrn Gllkk-AyElsvLcDA evali AP1_ARATH : 27- 41: skrra Gllkk-AhEisvLcDA evalv AP3_ARATH : 27- 41: skrrn Glfkk-AhEltvLcDA rvsii ARG1_YEAST : 104- 118: skrrh Gimkk-AyElsvLtGA nilll DEFA_ANTMA : 27- 41: skrrn Glfkk-AhElsvLcDA kvsii FBP1_PETHY : 27- 41: skrrn Gilkk-AkEisvLcDA rvsvi FBP2_PETHY : 27- 41: akrrn Gllkk-AyElsvLcDA evali GLOB_ANTMA : 27- 41: skrrn Gimkk-AkEisvLcDA hvsvi GLOB_TOBAC : 27- 41: skrrn Gilkk-AkEisvLcDA rvsvi MAD1_PETHY : 27- 41: skrrn Glfkk-AnEltvLcDA kvsii MAD2_PETHY : 27- 41: skrrn Giikk-AkEitvLcDA kvsli MCM1_YEAST : 42- 56: skrkh Gimkk-AfElsvLtGT qvlll MEF2_DROME : 27- 41: nkrkf Gvmkk-AyElsvLcDC eiali MEF2_HUMAN : 27- 41: tkrkf Glmkk-AyElsvLcDC eiali MEFX_HUMAN : 27- 41: tkrkf Glmkk-AyElsvLcDC eiali SRF_HUMAN : 167- 181: skrkt Gimkk-AyElstLtGT qvlll SRF_XENLA : 122- 136: skrkt Gimkk-AyElstLtGT qvlll YB32_YEAST : 27- 41: ikrka Glfkk-AhElsvLcQV diavi S 19: 16.3342 27( 25) E-L-x(2)-L-x-[DEGQS]-x(4)-[AGILV] Occurences: 27(25) AGL1_ARATH : 49- 60: lkkay ELsvLcDaevaL vifst AGL1_ARATH : 138- 149: slnfk ELknLeGrlekG isrvr AGL2_ARATH : 34- 45: lkkay ELsvLcDaevaL iifsn AGL3_ARATH : 34- 45: lkkay ELsvLcDaeiaL lifsn AGL4_ARATH : 34- 45: lkkay ELsvLcDaevsL ivfsn AGL5_ARATH : 49- 60: lkkay ELsvLcDaevaL vifst AGL5_ARATH : 138- 149: slnfk ELknLeSrlekG isrvr AGL6_ARATH : 34- 45: lkkay ELsvLcDaevaL iifss AG_ARATH : 83- 94: lkkay ELsvLcDaevaL ivfss AG_BRANA : 50- 61: lkkay ELsvLcDaevaL ivfss AP1_ARATH : 124- 135: amspk ELqnLeQqldtA lkhir AP3_ARATH : 34- 45: fkkah ELtvLcDarvsI imfss ARG1_YEAST : 111- 122: mkkay ELsvLtGanilL lilan DEFA_ANTMA : 34- 45: fkkah ELsvLcDakvsI imiss FBP1_PETHY : 118- 129: slnhr ELmiLeDalenG ltsir FBP2_PETHY : 34- 45: lkkay ELsvLcDaevaL iifsn GLOB_ANTMA : 120- 131: tlnyk ELmvLeDalenG tsalk GLOB_TOBAC : 118- 129: slnhr ELmmLeDaldnG ltsir MAD1_PETHY : 34- 45: fkkan ELtvLcDakvsI imiss MAD2_PETHY : 120- 131: slnhk ELmvLeEgltnG lssis MCM1_YEAST : 49- 60: mkkaf ELsvLtGtqvlL lvvse MEF2_DROME : 34- 45: mkkay ELsvLcDceiaL iifss MEF2_HUMAN : 34- 45: mkkay ELsvLcDceiaL iifns MEFX_HUMAN : 34- 45: mkkay ELsvLcDceiaL iifns SRF_HUMAN : 174- 185: mkkay ELstLtGtqvlL lvase SRF_XENLA : 129- 140: mkkay ELstLtGtqvlL lvase YB32_YEAST : 34- 45: fkkah ELsvLcQvdiaV iilgs T 20: 13.9193 25( 25) A-x(3,4)-V-L-x-[DGQST] Occurences: 25(25) AGL1_ARATH : 47- 55: gllkk AyelsVLcD aeval AGL2_ARATH : 32- 40: gllkk AyelsVLcD aeval AGL3_ARATH : 32- 40: gllkk AyelsVLcD aeial AGL4_ARATH : 32- 40: gllkk AyelsVLcD aevsl AGL5_ARATH : 47- 55: gllkk AyelsVLcD aeval AGL6_ARATH : 32- 40: rllkk AyelsVLcD aeval AG_ARATH : 81- 89: gllkk AyelsVLcD aeval AG_BRANA : 48- 56: gllkk AyelsVLcD aeval AP1_ARATH : 32- 40: gllkk AheisVLcD aeval AP3_ARATH : 32- 40: glfkk AheltVLcD arvsi ARG1_YEAST : 109- 117: gimkk AyelsVLtG anill DEFA_ANTMA : 32- 40: glfkk AhelsVLcD akvsi FBP1_PETHY : 32- 40: gilkk AkeisVLcD arvsv FBP2_PETHY : 32- 40: gllkk AyelsVLcD aeval GLOB_ANTMA : 32- 40: gimkk AkeisVLcD ahvsv GLOB_TOBAC : 32- 40: gilkk AkeisVLcD arvsv MAD1_PETHY : 32- 40: glfkk AneltVLcD akvsi MAD2_PETHY : 32- 40: giikk AkeitVLcD akvsl MCM1_YEAST : 47- 55: gimkk AfelsVLtG tqvll MEF2_DROME : 32- 40: gvmkk AyelsVLcD ceial MEF2_HUMAN : 32- 40: glmkk AyelsVLcD ceial MEFX_HUMAN : 32- 40: glmkk AyelsVLcD ceial SRF_HUMAN : 318- 325: savss Angt-VLkS tgsgp SRF_XENLA : 263- 270: apvts Angt-VLkT eggam YB32_YEAST : 32- 40: glfkk AhelsVLcQ vdiav Number of patterns evaluated by Pratt:726 Total running time: 3 seconds