------------------------------------------------------------
                Pratt version 2.1, Sept. 1996
                 Written by Inge Jonassen, 
                   University of Bergen
                           Norway
                   email: inge@ii.uib.no
                 For more information, see 
            http://www.ii.uib.no/~inge/Pratt.html
------------------------------------------------------------
                        Please quote:
             I.Jonassen, J.F.Collins, D.G.Higgins.
             Protein Science 1995;4(8):1587-1595.
------------------------------------------------------------



                Pratt version 2.1 

        Analysing 26 sequences from file SMALL_CYTOKINES_CC

PATTERN CONSERVATION:
   CM: min Nr of Seqs to Match                 26
   C%: min Percentage Seqs to Match         100.0

PATTERN RESTRICTIONS :
   PP: pos in seq [off,complete,start]        off
   PL: max Pattern Length                      50
   PN: max Nr of Pattern Symbols               50
   PX: max Nr of consecutive x's                5
   FN: max Nr of flexible spacers               2
   FL: max Flexibility                          2
   FP: max Flex.Product                        10
   BI: Input Pattern Symbol File              off
   BN: Nr of Pattern Symbols Initial Search    20

PATTERN SCORING:
   S: Scoring [info,mdl,tree,dist,ppv]       info

SEARCH PARAMETERS:
   G: Pattern Graph from [seq,al,query]       seq
   E: Search Greediness                         3
   R: Pattern Refinement                       on
   RG: Generalise ambiguous symbols           off

OUTPUT:
   OF: Output Filename       SMALL_CYTOKINES_CC.pratt2
   OP: PROSITE Pattern Format                  on
   ON: max number patterns                     20
   OA: max number Alignments                   20
   M: Print Patterns in sequences             off




Sequence lengths:
     C10_MOUSE    116
    EOTA_CAVPO     73
     G26_HUMAN     87
    I309_HUMAN     96
    MCP2_BOVIN     99
    MCP2_HUMAN     77
    MCPA_BOVIN     99
    MCPB_BOVIN     74
    MCPI_CAVPO    120
    MCPI_HUMAN     99
    MCPI_MOUSE    148
      MCPI_PIG     99
    MCPI_RABIT    125
      MCPI_RAT    148
    MCPT_HUMAN     99
    MCPT_MOUSE     97
    MI10_HUMAN     93
    MI1A_HUMAN     92
    MI1A_MOUSE     92
    MI1B_HUMAN     92
    MI1B_MOUSE     92
    MI1B_RABIT     92
    NAP4_HUMAN     31
    SISD_HUMAN     91
    SISD_MOUSE     91
    SISF_MOUSE     92

Pratt run started at Thu Feb  6 21:14:15 1997

No patterns found