------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 18 sequences from file SIGMA54_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 18 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename SIGMA54_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: RP54_ACICA 484 RP54_ALCEU 493 RP54_AZOCA 514 RP54_AZOVI 502 RP54_BACSU 436 RP54_BRAJA 484 RP54_CAUCR 497 RP54_ECOLI 477 RP54_KLEPN 477 RP54_PSEPU 497 RP54_RHIME 523 RP54_RHISN 525 RP54_RHOCA 426 RP54_RHOSH 434 RP54_SALTY 477 RP54_THIFE 475 RP55_BRAJA 537 RP55_RHIME 513 Pratt run started at Thu Feb 6 21:13:03 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 33.3604 18( 18) G-x(4)-R-R-T-V-x-K-Y-R 2: 29.1904 18( 18) R-R-T-V-x-K-Y-R 3: 27.6904 19( 18) R-x(0,2)-R-x(0,1)-T-V-x-K-Y-R 4: 25.0203 18( 18) R-T-V-x-K-Y-R 5: 25.0203 18( 18) A-x(5)-H-x-S-T-x-S-R 6: 24.0203 18( 18) Q-x(2)-F-x(3)-G-x(5)-P-x(0,2)-L-x(5)-A 7: 20.8503 18( 18) T-V-x-K-Y-R 8: 20.8503 18( 18) H-x-S-T-x-S-R 9: 20.8503 18( 18) L-x(3)-Q-x(3)-P-x-G-x(2)-A 10: 19.8503 18( 18) A-R-R-x(1,2)-V-x(1,2)-K 11: 18.8503 18( 18) G-x(3)-A-R-x(2,4)-V-x(0,2)-Y 12: 18.8503 19( 18) G-x(4)-R-R-x(0,2)-T-x(2,4)-R 13: 16.6802 18( 18) V-x-K-Y-R 14: 16.6802 18( 18) S-T-x-S-R 15: 16.6802 18( 18) L-x-P-x-P-G 16: 16.6802 18( 18) Q-x(3)-P-x-G-x(2)-A 17: 15.6802 20( 18) R-R-x(1,2)-A-x(2,3)-R 18: 15.6802 19( 18) A-x(1,2)-L-x(0,1)-L-x(2)-S 19: 15.6802 18( 18) G-x(5)-P-x(0,2)-L-x(5)-A 20: 15.6802 18( 18) G-x(1,2)-A-x(2)-L-x(3,4)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 93.6566 18( 18) A-x(2)-[ILV]-x-[LM]-H-x-S-T-[IV]-S-R-[AV]-x(2)-[GNQT]-[KR]-x(3)-[ST]-[NPQ]-x(4)-[EP]-[FLM]-[KR]-x-F-F-[GST]-x(2)-[AIV]-x-[AST]-[ADEQST]-[DEGST]-[DGNP]-[EG]-[ADES]-[ACP]-x-[ANS]-x-[ADE] B 2: 83.2578 18( 18) H-x-S-T-[IV]-S-R-[AV]-x(2)-[GNQT]-[KR]-x(3)-[ST]-[NPQ]-x(4)-[EP]-[FLM]-[KR]-x-F-F-[GST]-x(2)-[AIV]-x-[AST]-[ADEQST]-[DEGST]-[DGNP]-[EG]-[ADES]-[ACP]-x-[ANS]-x-[ADE] C 3: 79.0878 18( 18) S-T-[IV]-S-R-[AV]-x(2)-[GNQT]-[KR]-x(3)-[ST]-[NPQ]-x(4)-[EP]-[FLM]-[KR]-x-F-F-[GST]-x(2)-[AIV]-x-[AST]-[ADEQST]-[DEGST]-[DGNP]-[EG]-[ADES]-[ACP]-x-[ANS]-x-[ADE] D 4: 59.8834 18( 18) L-x(2)-[ILV]-Q-x-[FL]-[DE]-P-x-G-[ILV]-x-A-[KR]-[DNST]-[ALV]-x-[DE]-[CS]-[IL]-x-[ILV]-Q-[AIL] E 5: 59.5591 18( 18) G-x(2)-[ILV]-[AS]-R-R-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] F 6: 53.0515 18( 18) Q-x-[FL]-[DE]-P-x-G-[ILV]-x-A-[KR]-[DNST]-[ALV]-x-[DE]-[CS]-[IL]-x-[ILV]-Q-[AIL] G 7: 49.5481 18( 18) R-R-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] H 8: 48.0481 19( 18) R-x(0,2)-R-x(0,1)-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] I 9: 45.3780 18( 18) R-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] J 10: 41.8509 18( 18) G-x(2)-[ILV]-[AS]-R-R-x(0,2)-T-x(2,4)-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] K 11: 41.2080 18( 18) T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] L 12: 38.2669 18( 18) Q-x-[ADEGN]-F-[FL]-x(2)-G-x(3)-[LM]-x-P-x(0,2)-L-x(3)-[ADE]-x-A-x(2)-[LMV] M 13: 37.0379 18( 18) V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] N 14: 33.6901 18( 18) G-x(2)-[FILV]-A-R-x(2,4)-V-x(0,2)-Y-x-[ES]-[APST]-x(2)-[FILV]-x(2)-[ACSV]-x(3)-[HKR] O 15: 28.6127 18( 18) Q-x-[ADEGN]-F-[FL]-x(2)-G-x(3)-[LM]-x-P-x(0,2)-L P 16: 27.8844 18( 18) A-R-R-x(1,2)-V-x(1,2)-K-x(2)-[ES]-[AST]-x(2)-[AILV] Q 17: 24.7313 18( 18) G-x(3)-[LM]-x-P-x(0,2)-L-x(3)-[ADE]-x-A-x(2)-[LMV] R 18: 22.7583 18( 18) R-R-x(1,2)-A-x(2,3)-R-[DEST]-[AQST]-x(2)-[ILV] S 19: 17.8954 18( 18) A-x(1,2)-L-x(0,1)-L-x(2)-S-[NQST] T 20: 16.6802 18( 18) L-x-P-x-P-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 93.6566 18( 18) A-x(2)-[ILV]-x-[LM]-H-x-S-T-[IV]-S-R-[AV]-x(2)-[GNQT]-[KR]-x(3)-[ST]-[NPQ]-x(4)-[EP]-[FLM]-[KR]-x-F-F-[GST]-x(2)-[AIV]-x-[AST]-[ADEQST]-[DEGST]-[DGNP]-[EG]-[ADES]-[ACP]-x-[ANS]-x-[ADE] Occurences: 18(18) RP54_ACICA : 378- 426: vlrdv AeeVeLHeSTVSRVttNKfllTPrglfELKyFFSshVgTTSGGEAsStA iraki RP54_ALCEU : 388- 436: vlrei AdtLgLHeSTISRVttNKymaTPmgtfELKyFFGshVsTETGGAAsStA irali RP54_AZOCA : 396- 444: nlrtv AdaIgMHeSTVSRVtsNKyisTPrgvlEMKfFFSssIaSSGGGEAhAaE avrhr RP54_AZOVI : 396- 444: vlhdi AeaVgMHeSTISRVttQKymhTPrgiyELKyFFSshVsTAEGGECsStA iraii RP54_BACSU : 329- 377: tlrev AdcLsLHeSTVSRAikGKtiqTPyglfEMKlFFSakAeASGDGDAsNyA vkthl RP54_BRAJA : 360- 408: nlkav AeaIqMHeSTVSRVtaNKymaTNrgtfELKyFFTasIpSADGGEAhSaE avrhr RP54_CAUCR : 385- 433: nlrrv AdaIgMHeSTVSRVtsNKyiaTPrgvfELKfFFTsaIqSSEGGEAhSaA svrhk RP54_ECOLI : 371- 419: vladi AqaVeMHeSTISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_KLEPN : 371- 419: vladi AqaVeMHeSTISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_PSEPU : 391- 439: vlhdi AeaVgMHeSTISRVttQKymhTPrgiyELKyFFSshVsTSEGGECsStA iraii RP54_RHIME : 398- 446: nlriv AdaIkMHeSTVSRVtsNKymlTPrglfELKyFFTvsIgSAENGDAhSaE svrhr RP54_RHISN : 400- 448: nlriv AdaIkMHeSTVSRVtsNKyrlTPrglfELKyFFTvsIgSAENGDAhSaE svrhr RP54_RHOCA : 317- 365: tledv AseLgLHaSTISRAvsGRmiqTQtralPLRaFFSraVsTQGGGEAvSrD sldfv RP54_RHOSH : 324- 372: smeev AleLdLHpSTISRAtaTRlieTPrgliPLRaFFSrsVsSDGPEAPqSqD almal RP54_SALTY : 371- 419: vladi AqaVeMHeSTISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_THIFE : 370- 418: vlrhi AdaVeMHeSTVSRVtnQKymiTPrglyEFKyFFSshVgTDSGGSAsAtA irall RP55_BRAJA : 408- 456: nlkav AdaIqMHeSTVSRVtaNKymaTNrgtfELKyFFTasIaSADGGEAhSaE avrhh RP55_RHIME : 399- 447: nlrtv AdaIkMHeSTVSRVtsNKymlTPrglyELKyFFTasIgSAENGDAhSaE svrhr B 2: 83.2578 18( 18) H-x-S-T-[IV]-S-R-[AV]-x(2)-[GNQT]-[KR]-x(3)-[ST]-[NPQ]-x(4)-[EP]-[FLM]-[KR]-x-F-F-[GST]-x(2)-[AIV]-x-[AST]-[ADEQST]-[DEGST]-[DGNP]-[EG]-[ADES]-[ACP]-x-[ANS]-x-[ADE] Occurences: 18(18) RP54_ACICA : 384- 426: eevel HeSTVSRVttNKfllTPrglfELKyFFSshVgTTSGGEAsStA iraki RP54_ALCEU : 394- 436: dtlgl HeSTISRVttNKymaTPmgtfELKyFFGshVsTETGGAAsStA irali RP54_AZOCA : 402- 444: daigm HeSTVSRVtsNKyisTPrgvlEMKfFFSssIaSSGGGEAhAaE avrhr RP54_AZOVI : 402- 444: eavgm HeSTISRVttQKymhTPrgiyELKyFFSshVsTAEGGECsStA iraii RP54_BACSU : 335- 377: dclsl HeSTVSRAikGKtiqTPyglfEMKlFFSakAeASGDGDAsNyA vkthl RP54_BRAJA : 366- 408: eaiqm HeSTVSRVtaNKymaTNrgtfELKyFFTasIpSADGGEAhSaE avrhr RP54_CAUCR : 391- 433: daigm HeSTVSRVtsNKyiaTPrgvfELKfFFTsaIqSSEGGEAhSaA svrhk RP54_ECOLI : 377- 419: qavem HeSTISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_KLEPN : 377- 419: qavem HeSTISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_PSEPU : 397- 439: eavgm HeSTISRVttQKymhTPrgiyELKyFFSshVsTSEGGECsStA iraii RP54_RHIME : 404- 446: daikm HeSTVSRVtsNKymlTPrglfELKyFFTvsIgSAENGDAhSaE svrhr RP54_RHISN : 406- 448: daikm HeSTVSRVtsNKyrlTPrglfELKyFFTvsIgSAENGDAhSaE svrhr RP54_RHOCA : 323- 365: selgl HaSTISRAvsGRmiqTQtralPLRaFFSraVsTQGGGEAvSrD sldfv RP54_RHOSH : 330- 372: leldl HpSTISRAtaTRlieTPrgliPLRaFFSrsVsSDGPEAPqSqD almal RP54_SALTY : 377- 419: qavem HeSTISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_THIFE : 376- 418: davem HeSTVSRVtnQKymiTPrglyEFKyFFSshVgTDSGGSAsAtA irall RP55_BRAJA : 414- 456: daiqm HeSTVSRVtaNKymaTNrgtfELKyFFTasIaSADGGEAhSaE avrhh RP55_RHIME : 405- 447: daikm HeSTVSRVtsNKymlTPrglyELKyFFTasIgSAENGDAhSaE svrhr C 3: 79.0878 18( 18) S-T-[IV]-S-R-[AV]-x(2)-[GNQT]-[KR]-x(3)-[ST]-[NPQ]-x(4)-[EP]-[FLM]-[KR]-x-F-F-[GST]-x(2)-[AIV]-x-[AST]-[ADEQST]-[DEGST]-[DGNP]-[EG]-[ADES]-[ACP]-x-[ANS]-x-[ADE] Occurences: 18(18) RP54_ACICA : 386- 426: velhe STVSRVttNKfllTPrglfELKyFFSshVgTTSGGEAsStA iraki RP54_ALCEU : 396- 436: lglhe STISRVttNKymaTPmgtfELKyFFGshVsTETGGAAsStA irali RP54_AZOCA : 404- 444: igmhe STVSRVtsNKyisTPrgvlEMKfFFSssIaSSGGGEAhAaE avrhr RP54_AZOVI : 404- 444: vgmhe STISRVttQKymhTPrgiyELKyFFSshVsTAEGGECsStA iraii RP54_BACSU : 337- 377: lslhe STVSRAikGKtiqTPyglfEMKlFFSakAeASGDGDAsNyA vkthl RP54_BRAJA : 368- 408: iqmhe STVSRVtaNKymaTNrgtfELKyFFTasIpSADGGEAhSaE avrhr RP54_CAUCR : 393- 433: igmhe STVSRVtsNKyiaTPrgvfELKfFFTsaIqSSEGGEAhSaA svrhk RP54_ECOLI : 379- 419: vemhe STISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_KLEPN : 379- 419: vemhe STISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_PSEPU : 399- 439: vgmhe STISRVttQKymhTPrgiyELKyFFSshVsTSEGGECsStA iraii RP54_RHIME : 406- 446: ikmhe STVSRVtsNKymlTPrglfELKyFFTvsIgSAENGDAhSaE svrhr RP54_RHISN : 408- 448: ikmhe STVSRVtsNKyrlTPrglfELKyFFTvsIgSAENGDAhSaE svrhr RP54_RHOCA : 325- 365: lglha STISRAvsGRmiqTQtralPLRaFFSraVsTQGGGEAvSrD sldfv RP54_RHOSH : 332- 372: ldlhp STISRAtaTRlieTPrgliPLRaFFSrsVsSDGPEAPqSqD almal RP54_SALTY : 379- 419: vemhe STISRVttQKylhSPrgifELKyFFSshVnTEGGGEAsStA iralv RP54_THIFE : 378- 418: vemhe STVSRVtnQKymiTPrglyEFKyFFSshVgTDSGGSAsAtA irall RP55_BRAJA : 416- 456: iqmhe STVSRVtaNKymaTNrgtfELKyFFTasIaSADGGEAhSaE avrhh RP55_RHIME : 407- 447: ikmhe STVSRVtsNKymlTPrglyELKyFFTasIgSAENGDAhSaE svrhr D 4: 59.8834 18( 18) L-x(2)-[ILV]-Q-x-[FL]-[DE]-P-x-G-[ILV]-x-A-[KR]-[DNST]-[ALV]-x-[DE]-[CS]-[IL]-x-[ILV]-Q-[AIL] Occurences: 18(18) RP54_ACICA : 187- 211: evlvv LkhIQrLEPiGIgARSLaECLfVQI ealat RP54_ALCEU : 198- 222: evhai LtlLQsFDPpGVgARNAaECLaLQL rrlth RP54_AZOCA : 206- 230: qvadv LrvIQsFEPsGVgARSLsECLaLQL rdkdr RP54_AZOVI : 204- 228: evemv LrrIQqFEPaGIaARDLsESLlLQL rqlpp RP54_BACSU : 139- 163: eaeav LakLQsLEPaGIgARSLqECIlLQL qrlpn RP54_BRAJA : 170- 194: dvehv LavLQeFDPpGVcARNLrECLaIQL reldr RP54_CAUCR : 195- 219: lveet LsvLQgFEPvGVfARDVrECLaLQL kdlnr RP54_ECOLI : 179- 203: eveav LkrIQrFDPvGVaAKDLrDCLlIQL sqfdk RP54_KLEPN : 179- 203: eveav LkrIQrFDPvGVaAKDLrDCLlVQL sqfak RP54_PSEPU : 199- 223: eveav LhrIQqFEPaGVgARNLgECLlLQL rqlpa RP54_RHIME : 207- 231: dvarv LhvLQqFDPpGVfARTLgECLaIQL rarnr RP54_RHISN : 209- 233: dvtrv LvvLQqFDPpGVfARTLsECLaIQL rlrng RP54_RHOCA : 132- 156: raesm LavLQgFEPtGLfARDLsDCLiLQA readi RP54_RHOSH : 141- 165: ealvi LerLQaLEPaGLfARSLaECLaLQL edlgl RP54_SALTY : 179- 203: eveav LkrIQrFDPvGVaAKDLrDCLlIQL sqfdk RP54_THIFE : 179- 203: allav LlrVQdFDPpGVgARNLsECLlLQL kqmve RP55_BRAJA : 218- 242: evedv LavLQkFDPpGVcARNLsECLaIQL reldr RP55_RHIME : 208- 232: dvtrv LdvLQqFDPpGVfARTLgECLgLQL rarnr E 5: 59.5591 18( 18) G-x(2)-[ILV]-[AS]-R-R-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 18(18) RP54_ACICA : 457- 481: llkee GidVARRTVAKYRESlhIpsSsdRK vli RP54_ALCEU : 467- 491: llgeq GfvVARRTVAKYREAlkIpaVnlRK sl RP54_AZOCA : 476- 500: klkdd GidIARRTVAKYRESmnIpsSvqRR rekqa RP54_AZOVI : 475- 499: lleeq GiqVARRTVAKYRESlsIapSseRK rlm RP54_BACSU : 409- 433: lyeqh GiqISRRTVAKYRDQmnIpsSaaRK ryk RP54_BRAJA : 440- 464: rlrvs GidIARRTVAKYREAmrIrsSvqRR rdnmw RP54_CAUCR : 466- 490: ilkaa GvdIARRTVAKYREAmrIprAaeRR rlmke RP54_ECOLI : 450- 474: llseq GimVARRTVAKYRESlsIppSnqRK qlv RP54_KLEPN : 450- 474: mlsdq GimVARRTVAKYRESlsIppSnqRK qlv RP54_PSEPU : 470- 494: lleaq GiqVARRTVAKYRESlgIapSseRK rlm RP54_RHIME : 478- 502: vlkqa GvdIARRTVAKYREAmsIpsSvqRR rekra RP54_RHISN : 480- 504: ilkra GvdIARRTVAKYREAmnIpsSvqRR rekra RP54_RHOCA : 396- 420: laera GlrIARRTVAKYRSTlgLasSyeRR raaaa RP54_RHOSH : 404- 428: qakla GavLARRTVTKYRETlgIpsSydRK raaaa RP54_SALTY : 450- 474: llseq GimVARRTVAKYRESlsIppSnqRK qlv RP54_THIFE : 449- 473: vladq GiqIARRTVAKYREAanVppAsqRR rl RP55_BRAJA : 488- 512: rlras GidIARRTVAKYREAmrIpsSvqRR rdkqs RP55_RHIME : 479- 503: ilkka GvdIARRTVAKYREAmhIpsCvqRR rekra F 6: 53.0515 18( 18) Q-x-[FL]-[DE]-P-x-G-[ILV]-x-A-[KR]-[DNST]-[ALV]-x-[DE]-[CS]-[IL]-x-[ILV]-Q-[AIL] Occurences: 18(18) RP54_ACICA : 191- 211: vlkhi QrLEPiGIgARSLaECLfVQI ealat RP54_ALCEU : 202- 222: iltll QsFDPpGVgARNAaECLaLQL rrlth RP54_AZOCA : 210- 230: vlrvi QsFEPsGVgARSLsECLaLQL rdkdr RP54_AZOVI : 208- 228: vlrri QqFEPaGIaARDLsESLlLQL rqlpp RP54_BACSU : 143- 163: vlakl QsLEPaGIgARSLqECIlLQL qrlpn RP54_BRAJA : 174- 194: vlavl QeFDPpGVcARNLrECLaIQL reldr RP54_CAUCR : 199- 219: tlsvl QgFEPvGVfARDVrECLaLQL kdlnr RP54_ECOLI : 183- 203: vlkri QrFDPvGVaAKDLrDCLlIQL sqfdk RP54_KLEPN : 183- 203: vlkri QrFDPvGVaAKDLrDCLlVQL sqfak RP54_PSEPU : 203- 223: vlhri QqFEPaGVgARNLgECLlLQL rqlpa RP54_RHIME : 211- 231: vlhvl QqFDPpGVfARTLgECLaIQL rarnr RP54_RHISN : 213- 233: vlvvl QqFDPpGVfARTLsECLaIQL rlrng RP54_RHOCA : 136- 156: mlavl QgFEPtGLfARDLsDCLiLQA readi RP54_RHOSH : 145- 165: ilerl QaLEPaGLfARSLaECLaLQL edlgl RP54_SALTY : 183- 203: vlkri QrFDPvGVaAKDLrDCLlIQL sqfdk RP54_THIFE : 183- 203: vllrv QdFDPpGVgARNLsECLlLQL kqmve RP55_BRAJA : 222- 242: vlavl QkFDPpGVcARNLsECLaIQL reldr RP55_RHIME : 212- 232: vldvl QqFDPpGVfARTLgECLgLQL rarnr G 7: 49.5481 18( 18) R-R-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 18(18) RP54_ACICA : 462- 481: gidva RRTVAKYRESlhIpsSsdRK vli RP54_ALCEU : 472- 491: gfvva RRTVAKYREAlkIpaVnlRK sl RP54_AZOCA : 481- 500: gidia RRTVAKYRESmnIpsSvqRR rekqa RP54_AZOVI : 480- 499: giqva RRTVAKYRESlsIapSseRK rlm RP54_BACSU : 414- 433: giqis RRTVAKYRDQmnIpsSaaRK ryk RP54_BRAJA : 445- 464: gidia RRTVAKYREAmrIrsSvqRR rdnmw RP54_CAUCR : 471- 490: gvdia RRTVAKYREAmrIprAaeRR rlmke RP54_ECOLI : 455- 474: gimva RRTVAKYRESlsIppSnqRK qlv RP54_KLEPN : 455- 474: gimva RRTVAKYRESlsIppSnqRK qlv RP54_PSEPU : 475- 494: giqva RRTVAKYRESlgIapSseRK rlm RP54_RHIME : 483- 502: gvdia RRTVAKYREAmsIpsSvqRR rekra RP54_RHISN : 485- 504: gvdia RRTVAKYREAmnIpsSvqRR rekra RP54_RHOCA : 401- 420: glria RRTVAKYRSTlgLasSyeRR raaaa RP54_RHOSH : 409- 428: gavla RRTVTKYRETlgIpsSydRK raaaa RP54_SALTY : 455- 474: gimva RRTVAKYRESlsIppSnqRK qlv RP54_THIFE : 454- 473: giqia RRTVAKYREAanVppAsqRR rl RP55_BRAJA : 493- 512: gidia RRTVAKYREAmrIpsSvqRR rdkqs RP55_RHIME : 484- 503: gvdia RRTVAKYREAmhIpsCvqRR rekra H 8: 48.0481 19( 18) R-x(0,2)-R-x(0,1)-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 19(18) RP54_ACICA : 462- 481: gidva R--R-TVAKYRESlhIpsSsdRK vli RP54_ALCEU : 472- 491: gfvva R--R-TVAKYREAlkIpaVnlRK sl RP54_AZOCA : 481- 500: gidia R--R-TVAKYRESmnIpsSvqRR rekqa RP54_AZOVI : 480- 499: giqva R--R-TVAKYRESlsIapSseRK rlm RP54_BACSU : 414- 433: giqis R--R-TVAKYRDQmnIpsSaaRK ryk RP54_BRAJA : 445- 464: gidia R--R-TVAKYREAmrIrsSvqRR rdnmw RP54_CAUCR : 471- 490: gvdia R--R-TVAKYREAmrIprAaeRR rlmke RP54_ECOLI : 455- 474: gimva R--R-TVAKYRESlsIppSnqRK qlv RP54_KLEPN : 455- 474: gimva R--R-TVAKYRESlsIppSnqRK qlv RP54_PSEPU : 475- 494: giqva R--R-TVAKYRESlgIapSseRK rlm RP54_RHIME : 483- 502: gvdia R--R-TVAKYREAmsIpsSvqRR rekra RP54_RHISN : 485- 504: gvdia R--R-TVAKYREAmnIpsSvqRR rekra RP54_RHOCA : 398- 420: eragl RiaRrTVAKYRSTlgLasSyeRR raaaa RP54_RHOCA : 401- 420: glria R--R-TVAKYRSTlgLasSyeRR raaaa RP54_RHOSH : 409- 428: gavla R--R-TVTKYRETlgIpsSydRK raaaa RP54_SALTY : 455- 474: gimva R--R-TVAKYRESlsIppSnqRK qlv RP54_THIFE : 454- 473: giqia R--R-TVAKYREAanVppAsqRR rl RP55_BRAJA : 493- 512: gidia R--R-TVAKYREAmrIpsSvqRR rdkqs RP55_RHIME : 484- 503: gvdia R--R-TVAKYREAmhIpsCvqRR rekra I 9: 45.3780 18( 18) R-T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 18(18) RP54_ACICA : 463- 481: idvar RTVAKYRESlhIpsSsdRK vli RP54_ALCEU : 473- 491: fvvar RTVAKYREAlkIpaVnlRK sl RP54_AZOCA : 482- 500: idiar RTVAKYRESmnIpsSvqRR rekqa RP54_AZOVI : 481- 499: iqvar RTVAKYRESlsIapSseRK rlm RP54_BACSU : 415- 433: iqisr RTVAKYRDQmnIpsSaaRK ryk RP54_BRAJA : 446- 464: idiar RTVAKYREAmrIrsSvqRR rdnmw RP54_CAUCR : 472- 490: vdiar RTVAKYREAmrIprAaeRR rlmke RP54_ECOLI : 456- 474: imvar RTVAKYRESlsIppSnqRK qlv RP54_KLEPN : 456- 474: imvar RTVAKYRESlsIppSnqRK qlv RP54_PSEPU : 476- 494: iqvar RTVAKYRESlgIapSseRK rlm RP54_RHIME : 484- 502: vdiar RTVAKYREAmsIpsSvqRR rekra RP54_RHISN : 486- 504: vdiar RTVAKYREAmnIpsSvqRR rekra RP54_RHOCA : 402- 420: lriar RTVAKYRSTlgLasSyeRR raaaa RP54_RHOSH : 410- 428: avlar RTVTKYRETlgIpsSydRK raaaa RP54_SALTY : 456- 474: imvar RTVAKYRESlsIppSnqRK qlv RP54_THIFE : 455- 473: iqiar RTVAKYREAanVppAsqRR rl RP55_BRAJA : 494- 512: idiar RTVAKYREAmrIpsSvqRR rdkqs RP55_RHIME : 485- 503: vdiar RTVAKYREAmhIpsCvqRR rekra J 10: 41.8509 18( 18) G-x(2)-[ILV]-[AS]-R-R-x(0,2)-T-x(2,4)-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 18(18) RP54_ACICA : 457- 481: llkee GidVARR--TvakyRESlhIpsSsdRK vli RP54_ALCEU : 467- 491: llgeq GfvVARR--TvakyREAlkIpaVnlRK sl RP54_AZOCA : 476- 500: klkdd GidIARR--TvakyRESmnIpsSvqRR rekqa RP54_AZOVI : 475- 499: lleeq GiqVARR--TvakyRESlsIapSseRK rlm RP54_BACSU : 409- 433: lyeqh GiqISRR--TvakyRDQmnIpsSaaRK ryk RP54_BRAJA : 440- 464: rlrvs GidIARR--TvakyREAmrIrsSvqRR rdnmw RP54_CAUCR : 466- 490: ilkaa GvdIARR--TvakyREAmrIprAaeRR rlmke RP54_ECOLI : 450- 474: llseq GimVARR--TvakyRESlsIppSnqRK qlv RP54_KLEPN : 450- 474: mlsdq GimVARR--TvakyRESlsIppSnqRK qlv RP54_PSEPU : 470- 494: lleaq GiqVARR--TvakyRESlgIapSseRK rlm RP54_RHIME : 478- 502: vlkqa GvdIARR--TvakyREAmsIpsSvqRR rekra RP54_RHISN : 480- 504: ilkra GvdIARR--TvakyREAmnIpsSvqRR rekra RP54_RHOCA : 396- 420: laera GlrIARR--TvakyRSTlgLasSyeRR raaaa RP54_RHOSH : 404- 428: qakla GavLARRtvTky--RETlgIpsSydRK raaaa RP54_RHOSH : 404- 428: qakla GavLARR--TvtkyRETlgIpsSydRK raaaa RP54_SALTY : 450- 474: llseq GimVARR--TvakyRESlsIppSnqRK qlv RP54_THIFE : 449- 473: vladq GiqIARR--TvakyREAanVppAsqRR rl RP55_BRAJA : 488- 512: rlras GidIARR--TvakyREAmrIpsSvqRR rdkqs RP55_RHIME : 479- 503: ilkka GvdIARR--TvakyREAmhIpsCvqRR rekra K 11: 41.2080 18( 18) T-V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 18(18) RP54_ACICA : 464- 481: dvarr TVAKYRESlhIpsSsdRK vli RP54_ALCEU : 474- 491: vvarr TVAKYREAlkIpaVnlRK sl RP54_AZOCA : 483- 500: diarr TVAKYRESmnIpsSvqRR rekqa RP54_AZOVI : 482- 499: qvarr TVAKYRESlsIapSseRK rlm RP54_BACSU : 416- 433: qisrr TVAKYRDQmnIpsSaaRK ryk RP54_BRAJA : 447- 464: diarr TVAKYREAmrIrsSvqRR rdnmw RP54_CAUCR : 473- 490: diarr TVAKYREAmrIprAaeRR rlmke RP54_ECOLI : 457- 474: mvarr TVAKYRESlsIppSnqRK qlv RP54_KLEPN : 457- 474: mvarr TVAKYRESlsIppSnqRK qlv RP54_PSEPU : 477- 494: qvarr TVAKYRESlgIapSseRK rlm RP54_RHIME : 485- 502: diarr TVAKYREAmsIpsSvqRR rekra RP54_RHISN : 487- 504: diarr TVAKYREAmnIpsSvqRR rekra RP54_RHOCA : 403- 420: riarr TVAKYRSTlgLasSyeRR raaaa RP54_RHOSH : 411- 428: vlarr TVTKYRETlgIpsSydRK raaaa RP54_SALTY : 457- 474: mvarr TVAKYRESlsIppSnqRK qlv RP54_THIFE : 456- 473: qiarr TVAKYREAanVppAsqRR rl RP55_BRAJA : 495- 512: diarr TVAKYREAmrIpsSvqRR rdkqs RP55_RHIME : 486- 503: diarr TVAKYREAmhIpsCvqRR rekra L 12: 38.2669 18( 18) Q-x-[ADEGN]-F-[FL]-x(2)-G-x(3)-[LM]-x-P-x(0,2)-L-x(3)-[ADE]-x-A-x(2)-[LMV] Occurences: 18(18) RP54_ACICA : 358- 381: civqh QrEFLeiGaegMkP--LvlrDvAeeV elhes RP54_ALCEU : 368- 391: aiver QkNFFshGeiaMrP--LvlrEiAdtL glhes RP54_AZOCA : 376- 401: eivrq QdAFLvhGvrhLrPlnLrtvAdAigM hestv RP54_AZOVI : 376- 399: qiveh QrGFLdyGeeaMkP--LvlhDiAeaV gmhes RP54_AZOVI : 376- 401: qiveh QrGFLdyGeeaMkPlvLhdiAeAvgM hesti RP54_BACSU : 309- 332: elitr QkDFFlkGrsaMkP--LtlrEvAdcL slhes RP54_BRAJA : 340- 365: eivrq QdGFFtlGvahLrPlnLkavAeAiqM hestv RP54_CAUCR : 365- 390: eivrq QdGFLafGvehLrPlnLrrvAdAigM hestv RP54_ECOLI : 351- 376: civeq QqAFFeqGeeyMkPmvLadiAqAveM hesti RP54_KLEPN : 351- 376: civeq QqAFFeqGeefMkPmvLadiAqAveM hesti RP54_PSEPU : 371- 394: riveh QrGFLdhGdeaMkP--LvlhDiAeaV gmhes RP54_PSEPU : 371- 396: riveh QrGFLdhGdeaMkPlvLhdiAeAvgM hesti RP54_RHIME : 378- 403: eivrq QdAFLihGvghLrPlnLrivAdAikM hestv RP54_RHISN : 380- 405: eivrq QdAFLvhGvdhLrPlnLrivAdAikM hestv RP54_RHOCA : 297- 320: vlvar QsAFLdkGpahLvP--LtleDvAseL glhas RP54_RHOSH : 304- 327: clvrh QaDFLdqGpraLrP--LsmeEvAleL dlhps RP54_SALTY : 351- 376: civeq QqAFFeqGeeyMkPmvLadiAqAveM hesti RP54_THIFE : 350- 375: aiver QkDFFanGpesMrPmvLrhiAdAveM hestv RP55_BRAJA : 388- 413: eivrq QdGFFthGvahLrPlnLkavAdAiqM hestv RP55_RHIME : 379- 404: eivrq QdAFLmhGvghLrPlnLrtvAdAikM hestv M 13: 37.0379 18( 18) V-[AT]-K-Y-R-[DES]-[AQST]-x(2)-[ILV]-x(2)-[ACSV]-x(2)-R-[KR] Occurences: 18(18) RP54_ACICA : 465- 481: varrt VAKYRESlhIpsSsdRK vli RP54_ALCEU : 475- 491: varrt VAKYREAlkIpaVnlRK sl RP54_AZOCA : 484- 500: iarrt VAKYRESmnIpsSvqRR rekqa RP54_AZOVI : 483- 499: varrt VAKYRESlsIapSseRK rlm RP54_BACSU : 417- 433: isrrt VAKYRDQmnIpsSaaRK ryk RP54_BRAJA : 448- 464: iarrt VAKYREAmrIrsSvqRR rdnmw RP54_CAUCR : 474- 490: iarrt VAKYREAmrIprAaeRR rlmke RP54_ECOLI : 458- 474: varrt VAKYRESlsIppSnqRK qlv RP54_KLEPN : 458- 474: varrt VAKYRESlsIppSnqRK qlv RP54_PSEPU : 478- 494: varrt VAKYRESlgIapSseRK rlm RP54_RHIME : 486- 502: iarrt VAKYREAmsIpsSvqRR rekra RP54_RHISN : 488- 504: iarrt VAKYREAmnIpsSvqRR rekra RP54_RHOCA : 404- 420: iarrt VAKYRSTlgLasSyeRR raaaa RP54_RHOSH : 412- 428: larrt VTKYRETlgIpsSydRK raaaa RP54_SALTY : 458- 474: varrt VAKYRESlsIppSnqRK qlv RP54_THIFE : 457- 473: iarrt VAKYREAanVppAsqRR rl RP55_BRAJA : 496- 512: iarrt VAKYREAmrIpsSvqRR rdkqs RP55_RHIME : 487- 503: iarrt VAKYREAmhIpsCvqRR rekra N 14: 33.6901 18( 18) G-x(2)-[FILV]-A-R-x(2,4)-V-x(0,2)-Y-x-[ES]-[APST]-x(2)-[FILV]-x(2)-[ACSV]-x(3)-[HKR] Occurences: 18(18) RP54_ACICA : 457- 481: llkee GidVARrt--VakYrESlhIpsSsdrK vli RP54_ALCEU : 467- 491: llgeq GfvVARrt--VakYrEAlkIpaVnlrK sl RP54_AZOCA : 476- 500: klkdd GidIARrt--VakYrESmnIpsSvqrR rekqa RP54_AZOVI : 475- 499: lleeq GiqVARrt--VakYrESlsIapSserK rlm RP54_BACSU : 218- 242: lhprp GllFARpeqdV--YiEPdiFitVkngH iaael RP54_BRAJA : 440- 464: rlrvs GidIARrt--VakYrEAmrIrsSvqrR rdnmw RP54_CAUCR : 466- 490: ilkaa GvdIARrt--VakYrEAmrIprAaerR rlmke RP54_ECOLI : 450- 474: llseq GimVARrt--VakYrESlsIppSnqrK qlv RP54_KLEPN : 450- 474: mlsdq GimVARrt--VakYrESlsIppSnqrK qlv RP54_PSEPU : 470- 494: lleaq GiqVARrt--VakYrESlgIapSserK rlm RP54_RHIME : 478- 502: vlkqa GvdIARrt--VakYrEAmsIpsSvqrR rekra RP54_RHISN : 480- 504: ilkra GvdIARrt--VakYrEAmnIpsSvqrR rekra RP54_RHOCA : 396- 420: laera GlrIARrt--VakYrSTlgLasSyerR raaaa RP54_RHOSH : 404- 428: qakla GavLARrt--VtkYrETlgIpsSydrK raaaa RP54_SALTY : 450- 474: llseq GimVARrt--VakYrESlsIppSnqrK qlv RP54_THIFE : 449- 473: vladq GiqIARrt--VakYrEAanVppAsqrR rl RP55_BRAJA : 488- 512: rlras GidIARrt--VakYrEAmrIpsSvqrR rdkqs RP55_RHIME : 479- 503: ilkka GvdIARrt--VakYrEAmhIpsCvqrR rekra O 15: 28.6127 18( 18) Q-x-[ADEGN]-F-[FL]-x(2)-G-x(3)-[LM]-x-P-x(0,2)-L Occurences: 18(18) RP54_ACICA : 358- 372: civqh QrEFLeiGaegMkP--L vlrdv RP54_ALCEU : 368- 382: aiver QkNFFshGeiaMrP--L vlrei RP54_AZOCA : 376- 390: eivrq QdAFLvhGvrhLrP--L nlrtv RP54_AZOCA : 376- 392: eivrq QdAFLvhGvrhLrPlnL rtvad RP54_AZOVI : 376- 390: qiveh QrGFLdyGeeaMkP--L vlhdi RP54_AZOVI : 376- 392: qiveh QrGFLdyGeeaMkPlvL hdiae RP54_BACSU : 309- 323: elitr QkDFFlkGrsaMkP--L tlrev RP54_BRAJA : 340- 354: eivrq QdGFFtlGvahLrP--L nlkav RP54_BRAJA : 340- 356: eivrq QdGFFtlGvahLrPlnL kavae RP54_CAUCR : 365- 379: eivrq QdGFLafGvehLrP--L nlrrv RP54_CAUCR : 365- 381: eivrq QdGFLafGvehLrPlnL rrvad RP54_ECOLI : 351- 367: civeq QqAFFeqGeeyMkPmvL adiaq RP54_KLEPN : 351- 367: civeq QqAFFeqGeefMkPmvL adiaq RP54_PSEPU : 371- 385: riveh QrGFLdhGdeaMkP--L vlhdi RP54_PSEPU : 371- 387: riveh QrGFLdhGdeaMkPlvL hdiae RP54_RHIME : 378- 392: eivrq QdAFLihGvghLrP--L nlriv RP54_RHIME : 378- 394: eivrq QdAFLihGvghLrPlnL rivad RP54_RHISN : 380- 394: eivrq QdAFLvhGvdhLrP--L nlriv RP54_RHISN : 380- 396: eivrq QdAFLvhGvdhLrPlnL rivad RP54_RHOCA : 297- 311: vlvar QsAFLdkGpahLvP--L tledv RP54_RHOSH : 304- 318: clvrh QaDFLdqGpraLrP--L smeev RP54_SALTY : 351- 367: civeq QqAFFeqGeeyMkPmvL adiaq RP54_THIFE : 350- 366: aiver QkDFFanGpesMrPmvL rhiad RP55_BRAJA : 388- 402: eivrq QdGFFthGvahLrP--L nlkav RP55_BRAJA : 388- 404: eivrq QdGFFthGvahLrPlnL kavad RP55_RHIME : 379- 393: eivrq QdAFLmhGvghLrP--L nlrtv RP55_RHIME : 379- 395: eivrq QdAFLmhGvghLrPlnL rtvad P 16: 27.8844 18( 18) A-R-R-x(1,2)-V-x(1,2)-K-x(2)-[ES]-[AST]-x(2)-[AILV] Occurences: 18(18) RP54_ACICA : 461- 474: egidv ARRt-Va-KyrESlhI psssd RP54_ALCEU : 471- 484: qgfvv ARRt-Va-KyrEAlkI pavnl RP54_AZOCA : 480- 493: dgidi ARRt-Va-KyrESmnI pssvq RP54_AZOVI : 479- 492: qgiqv ARRt-Va-KyrESlsI apsse RP54_BACSU : 125- 140: dieea ARRlsVsaKeaEAvlA klqsl RP54_BRAJA : 444- 457: sgidi ARRt-Va-KyrEAmrI rssvq RP54_CAUCR : 470- 483: agvdi ARRt-Va-KyrEAmrI praae RP54_ECOLI : 454- 467: qgimv ARRt-Va-KyrESlsI ppsnq RP54_KLEPN : 454- 467: qgimv ARRt-Va-KyrESlsI ppsnq RP54_PSEPU : 474- 487: qgiqv ARRt-Va-KyrESlgI apsse RP54_RHIME : 482- 495: agvdi ARRt-Va-KyrEAmsI pssvq RP54_RHISN : 484- 497: agvdi ARRt-Va-KyrEAmnI pssvq RP54_RHOCA : 400- 413: aglri ARRt-Va-KyrSTlgL assye RP54_RHOSH : 408- 421: agavl ARRt-Vt-KyrETlgI pssyd RP54_SALTY : 454- 467: qgimv ARRt-Va-KyrESlsI ppsnq RP54_THIFE : 453- 466: qgiqi ARRt-Va-KyrEAanV ppasq RP55_BRAJA : 492- 505: sgidi ARRt-Va-KyrEAmrI pssvq RP55_RHIME : 483- 496: agvdi ARRt-Va-KyrEAmhI pscvq Q 17: 24.7313 18( 18) G-x(3)-[LM]-x-P-x(0,2)-L-x(3)-[ADE]-x-A-x(2)-[LMV] Occurences: 18(18) RP54_ACICA : 365- 381: eflei GaegMkP--LvlrDvAeeV elhes RP54_ALCEU : 375- 391: nffsh GeiaMrP--LvlrEiAdtL glhes RP54_AZOCA : 383- 401: aflvh GvrhLrPlnLrtvAdAigM hestv RP54_AZOVI : 383- 399: gfldy GeeaMkP--LvlhDiAeaV gmhes RP54_AZOVI : 383- 401: gfldy GeeaMkPlvLhdiAeAvgM hesti RP54_BACSU : 316- 332: dfflk GrsaMkP--LtlrEvAdcL slhes RP54_BRAJA : 347- 365: gfftl GvahLrPlnLkavAeAiqM hestv RP54_CAUCR : 372- 390: gflaf GvehLrPlnLrrvAdAigM hestv RP54_ECOLI : 358- 376: affeq GeeyMkPmvLadiAqAveM hesti RP54_KLEPN : 358- 376: affeq GeefMkPmvLadiAqAveM hesti RP54_PSEPU : 378- 394: gfldh GdeaMkP--LvlhDiAeaV gmhes RP54_PSEPU : 378- 396: gfldh GdeaMkPlvLhdiAeAvgM hesti RP54_RHIME : 385- 403: aflih GvghLrPlnLrivAdAikM hestv RP54_RHISN : 387- 405: aflvh GvdhLrPlnLrivAdAikM hestv RP54_RHOCA : 304- 320: afldk GpahLvP--LtleDvAseL glhas RP54_RHOSH : 311- 327: dfldq GpraLrP--LsmeEvAleL dlhps RP54_SALTY : 358- 376: affeq GeeyMkPmvLadiAqAveM hesti RP54_THIFE : 357- 375: dffan GpesMrPmvLrhiAdAveM hestv RP55_BRAJA : 395- 413: gffth GvahLrPlnLkavAdAiqM hestv RP55_RHIME : 386- 404: aflmh GvghLrPlnLrtvAdAikM hestv R 18: 22.7583 18( 18) R-R-x(1,2)-A-x(2,3)-R-[DEST]-[AQST]-x(2)-[ILV] Occurences: 18(18) RP54_ACICA : 462- 474: gidva RRtvAky-RESlhI psssd RP54_ALCEU : 472- 484: gfvva RRtvAky-REAlkI pavnl RP54_AZOCA : 481- 493: gidia RRtvAky-RESmnI pssvq RP54_AZOVI : 480- 492: giqva RRtvAky-RESlsI apsse RP54_BACSU : 414- 426: giqis RRtvAky-RDQmnI pssaa RP54_BRAJA : 445- 457: gidia RRtvAky-REAmrI rssvq RP54_CAUCR : 471- 483: gvdia RRtvAky-REAmrI praae RP54_ECOLI : 455- 467: gimva RRtvAky-RESlsI ppsnq RP54_KLEPN : 455- 467: gimva RRtvAky-RESlsI ppsnq RP54_PSEPU : 475- 487: giqva RRtvAky-RESlgI apsse RP54_RHIME : 483- 495: gvdia RRtvAky-REAmsI pssvq RP54_RHISN : 485- 497: gvdia RRtvAky-REAmnI pssvq RP54_RHOCA : 401- 413: glria RRtvAky-RSTlgL assye RP54_RHOSH : 288- 300: erave RRq-AtllRTAvcL vrhqa RP54_SALTY : 455- 467: gimva RRtvAky-RESlsI ppsnq RP54_THIFE : 454- 466: giqia RRtvAky-REAanV ppasq RP55_BRAJA : 493- 505: gidia RRtvAky-REAmrI pssvq RP55_RHIME : 484- 496: gvdia RRtvAky-REAmhI pscvq S 19: 17.8954 18( 18) A-x(1,2)-L-x(0,1)-L-x(2)-S-[NQST] Occurences: 18(18) RP54_ACICA : 24- 32: pqlqq AirL-LqlSS leleq RP54_ALCEU : 388- 397: vlrei AdtLgLheST isrvt RP54_AZOCA : 24- 32: pqlmq AikL-LqlSN lelva RP54_AZOVI : 22- 30: pqlqq AirL-LqlST ldlqq RP54_BACSU : 329- 338: tlrev AdcLsLheST vsrai RP54_BRAJA : 24- 32: pqlmq AikL-LqlSN ldlmt RP54_CAUCR : 24- 32: pqlqq AimL-LqlSN ielda RP54_ECOLI : 22- 30: pqlqq AirL-LqlST lelqq RP54_KLEPN : 22- 30: pqlqq AirL-LqlST lelqq RP54_PSEPU : 22- 30: pqlqq AirL-LqlST ldlqq RP54_RHIME : 5- 13: mals As-LhLrqSQ slvmt RP54_RHISN : 5- 13: mals As-LhLrqSQ slvmt RP54_RHOCA : 317- 326: tledv AseLgLhaST israv RP54_RHOSH : 324- 333: smeev AleLdLhpST israt RP54_SALTY : 22- 30: pqlqq AirL-LqlST lelqq RP54_THIFE : 22- 30: pqlqq AirL-LqlST vdlqq RP55_BRAJA : 24- 32: pqlmq AikL-LqlSN ldltt RP55_RHIME : 5- 13: mals As-LhLrqSQ slvmt T 20: 16.6802 18( 18) L-x-P-x-P-G Occurences: 18(18) RP54_ACICA : 263- 268: dllkt LkPyPG aefeq RP54_ALCEU : 273- 278: elirs LaPyPG haysr RP54_AZOCA : 279- 284: geirr LdPkPG laygg RP54_AZOVI : 281- 286: eliqs LnPrPG aqies RP54_BACSU : 213- 218: ddiaa LhPrPG llfar RP54_BRAJA : 243- 248: delrr LsPkPG mkfgs RP54_CAUCR : 268- 273: geirs LnPrPG aayhs RP54_ECOLI : 256- 261: nliqs LdPrPG qsiqt RP54_KLEPN : 256- 261: nliqs LdPrPG qsiqt RP54_PSEPU : 276- 281: elvqs LnPrPG sqies RP54_RHIME : 280- 285: aeirk LdPkPG tsfet RP54_RHISN : 282- 287: aeirk LdPkPG tsfet RP54_RHOCA : 205- 210: kqirh LnPkPG lafdh RP54_RHOSH : 214- 219: alirs LsPkPG eafaa RP54_SALTY : 256- 261: nliqs LdPrPG qsiqt RP54_THIFE : 257- 262: alisa LnPkPG edvgt RP55_BRAJA : 291- 296: geirr LnPkPG mkfga RP55_RHIME : 281- 286: aeirk LdPkPG tsfet Number of patterns evaluated by Pratt:11795 Total running time: 17 seconds