------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 21 sequences from file SAA PATTERN CONSERVATION: CM: min Nr of Seqs to Match 21 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename SAA.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: SAA1_MESAU 122 SAA1_MOUSE 122 SAA1_MUSVI 129 SAA2_MESAU 122 SAA2_MOUSE 122 SAA2_MUSVI 129 SAA3_HUMAN 122 SAA3_MESAU 122 SAA3_MOUSE 122 SAA3_RABIT 122 SAA4_HUMAN 130 SAA5_MOUSE 130 SAA_ANAPL 106 SAA_BOVIN 112 SAA_CANFA 129 SAA_FELCA 90 SAA_HORSE 80 SAA_HUMAN 122 SAA_MACMU 76 SAA_RABIT 122 SAA_SHEEP 112 Pratt run started at Thu Feb 6 21:11:30 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 66.7208 21( 21) Y-x(2)-A-R-G-N-Y-x-A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 2: 62.5508 21( 21) A-R-G-N-Y-x-A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 3: 58.3807 21( 21) R-G-N-Y-x-A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 4: 54.2107 21( 21) G-N-Y-x-A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 5: 50.0406 21( 21) N-Y-x-A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 6: 45.8706 21( 21) Y-x-A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 7: 41.7005 21( 21) A-x(2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 8: 41.2005 40( 21) A-x(1,2)-R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 9: 37.5305 21( 21) R-G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 10: 33.3604 21( 21) G-x-G-G-x-W-A-x(3)-I-S-x(2)-R 11: 33.3604 21( 21) F-x(3)-A-x(2)-G-x(2)-D-x(2)-R-A-Y-x-D 12: 29.1904 21( 21) G-G-x-W-A-x(3)-I-S-x(2)-R 13: 29.1904 21( 21) A-x(2)-G-x(2)-D-x(2)-R-A-Y-x-D 14: 25.0203 21( 21) G-x-W-A-x(3)-I-S-x(2)-R 15: 25.0203 21( 21) G-x(2)-D-x(2)-R-A-Y-x-D 16: 20.8503 21( 21) W-A-x(3)-I-S-x(2)-R 17: 20.8503 21( 21) D-x(2)-R-A-Y-x-D 18: 19.3503 37( 21) E-A-x(5)-D-x(3,4)-A-x(2,4)-D 19: 16.6802 21( 21) A-x(3)-I-S-x(2)-R 20: 16.6802 21( 21) R-A-Y-x-D Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 132.2301 21( 21) G-[ASTV]-x-D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R B 2: 130.0467 21( 21) A-x(2)-G-[ASTV]-x-D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S C 3: 127.9184 21( 21) F-[FILMV]-x-[ADE]-A-x(2)-G-[ASTV]-x-D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT] D 4: 125.8738 21( 21) D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R E 5: 118.1369 21( 21) R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R F 6: 90.2137 21( 21) Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R G 7: 79.6031 21( 21) A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R H 8: 75.4330 21( 21) R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R I 9: 71.2630 21( 21) G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R J 10: 67.0929 21( 21) N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R K 11: 62.9229 21( 21) Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R L 12: 55.5822 21( 21) A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R M 13: 55.0822 40( 21) A-x(1,2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R N 14: 51.4122 21( 21) R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R O 15: 47.2421 21( 21) G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R P 16: 39.8841 21( 21) G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Q 17: 35.7141 21( 21) G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R R 18: 28.8786 21( 21) W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R S 19: 28.4935 35( 21) E-A-x(5)-D-x(3,4)-A-x(2,4)-D-x(4)-[GN]-x(2)-[GN]-[ASV] T 20: 24.7085 21( 21) A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Best patterns with alignements: fitness hits(seqs) Pattern A 1: 132.2301 21( 21) G-[ASTV]-x-D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 31- 80: keagq GTrDMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 31- 80: heafq GAgDMwRAYtDmkeAnWknSDkYFHARGNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 30- 79: geaaq GAwDMyRAYsDmieAkYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 31- 80: keagq GTrDMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 31- 80: geafq GAgDMwRAYtDmkeAgWkdGDkYFHARGNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 30- 79: geavq GAwDMyRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 31- 80: kaagq GAkDMwRAYsDmkeAnYkkSDkYFHARGNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 31- 80: keagq GStDMwRAYsDmreAnWknSDkYFHARGNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 31- 80: keagq GSrDMwRAYsDmkkAnWknSDkYFHARGNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 31- 80: keagq GAkDMwRAYsDmkeAnYknSDkYFHARGNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 31- 80: kealq GVgDMgRAYwDimiSnHqnSNrYLYARGNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 31- 80: reavq GTwDLwRAYrDnleAnYqnADqYFYARGNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 17- 66: ldaag GAwDMlRAYrDmreAnHigADkYFHARGNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 12- 61: geaye GAkDMwRAYsDmreAnYkgADkYFHARGNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 30- 79: seaaq GAwDMwRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 12- 61: geaaq GAwDMwRAYsDmreAnYigADkYFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 11- 60: geaar GTwDMlRAYnDmreAnYigADkYFHARGNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 31- 80: geafd GArDMwRAYsDmreAnYigSDkYFHARGNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 13- 62: geayd GArDMwRAYsDmkeAnYknSDkYFHARGNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 31- 80: geavr GAgDMwRAYsDmreAnYinADkYFHARGNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 12- 61: geaye GAkDMwRAYsDmreAnFkgADkYFHARGNYDAaqRGPGGVWAAEvISnGR ealqg B 2: 130.0467 21( 21) A-x(2)-G-[ASTV]-x-D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S Occurences: 21(21) SAA1_MESAU : 28- 77: qfmke AgqGTrDMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvIS dareg SAA1_MOUSE : 28- 77: sfvhe AfqGAgDMwRAYtDmkeAnWknSDkYFHARGNYDAaqRGPGGVWAAEkIS dgrea SAA1_MUSVI : 27- 76: sfige AaqGAwDMyRAYsDmieAkYknSDkYFHARGNYDAaqRGPGGAWAAKvIS darer SAA2_MESAU : 28- 77: qfmke AgqGTrDMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvIS dareg SAA2_MOUSE : 28- 77: sfige AfqGAgDMwRAYtDmkeAgWkdGDkYFHARGNYDAaqRGPGGVWAAEkIS dares SAA2_MUSVI : 27- 76: sfige AvqGAwDMyRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvIS darer SAA3_HUMAN : 28- 77: tflka AgqGAkDMwRAYsDmkeAnYkkSDkYFHARGNYDAvqRGPGGVWATEvIS daren SAA3_MESAU : 28- 77: qfmke AgqGStDMwRAYsDmreAnWknSDkYFHARGNYDAakRGPGGAWAAKvIS dareg SAA3_MOUSE : 28- 77: qfmke AgqGSrDMwRAYsDmkkAnWknSDkYFHARGNYDAarRGPGGAWAAKvIS darea SAA3_RABIT : 28- 77: tflke AgqGAkDMwRAYsDmkeAnYknSDkYFHARGNYDAakRGPGGVWAAEvIS daren SAA4_HUMAN : 28- 77: sffke AlqGVgDMgRAYwDimiSnHqnSNrYLYARGNYDAaqRGPGGVWAAKlIS rsrvy SAA5_MOUSE : 28- 77: sffre AvqGTwDLwRAYrDnleAnYqnADqYFYARGNYEAqqRGSGGIWAAKiIS tsrky SAA_ANAPL : 14- 63: rfvld AagGAwDMlRAYrDmreAnHigADkYFHARGNYDAarRGPGGAWAARvIS daren SAA_BOVIN : 9- 58: sffge AyeGAkDMwRAYsDmreAnYkgADkYFHARGNYDAaqRGPGGAWAAKvIS daren SAA_CANFA : 27- 76: sfvse AaqGAwDMwRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvIS daren SAA_FELCA : 9- 58: sflge AaqGAwDMwRAYsDmreAnYigADkYFHARGNYDAaqRGPGGAWAAKvIS daren SAA_HORSE : 8- 57: sflge AarGTwDMlRAYnDmreAnYigADkYFHARGNYDAakRGPGGAWAAKvIS daren SAA_HUMAN : 28- 77: sflge AfdGArDMwRAYsDmreAnYigSDkYFHARGNYDAakRGPGGVWAAEaIS daren SAA_MACMU : 10- 59: sflge AydGArDMwRAYsDmkeAnYknSDkYFHARGNYDAaqRGPGGVWAAEvIS daren SAA_RABIT : 28- 77: sfige AvrGAgDMwRAYsDmreAnYinADkYFHARGNYDAaqRGPGGVWAAKvIS dvred SAA_SHEEP : 9- 58: sflge AyeGAkDMwRAYsDmreAnFkgADkYFHARGNYDAaqRGPGGVWAAEvIS ngrea C 3: 127.9184 21( 21) F-[FILMV]-x-[ADE]-A-x(2)-G-[ASTV]-x-D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT] Occurences: 21(21) SAA1_MESAU : 24- 73: qrwfq FMkEAgqGTrDMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAA kvisd SAA1_MOUSE : 24- 73: ggffs FVhEAfqGAgDMwRAYtDmkeAnWknSDkYFHARGNYDAaqRGPGGVWAA ekisd SAA1_MUSVI : 23- 72: sqwys FIgEAaqGAwDMyRAYsDmieAkYknSDkYFHARGNYDAaqRGPGGAWAA kvisd SAA2_MESAU : 24- 73: qrwfq FMkEAgqGTrDMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAA kvisd SAA2_MOUSE : 24- 73: ggffs FIgEAfqGAgDMwRAYtDmkeAgWkdGDkYFHARGNYDAaqRGPGGVWAA ekisd SAA2_MUSVI : 23- 72: sqwys FIgEAvqGAwDMyRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAA kvisd SAA3_HUMAN : 24- 73: qgwlt FLkAAgqGAkDMwRAYsDmkeAnYkkSDkYFHARGNYDAvqRGPGGVWAT evisd SAA3_MESAU : 24- 73: qrwfq FMkEAgqGStDMwRAYsDmreAnWknSDkYFHARGNYDAakRGPGGAWAA kvisd SAA3_MOUSE : 24- 73: qrwvq FMkEAgqGSrDMwRAYsDmkkAnWknSDkYFHARGNYDAarRGPGGAWAA kvisd SAA3_RABIT : 24- 73: rewlt FLkEAgqGAkDMwRAYsDmkeAnYknSDkYFHARGNYDAakRGPGGVWAA evisd SAA4_HUMAN : 24- 73: eswrs FFkEAlqGVgDMgRAYwDimiSnHqnSNrYLYARGNYDAaqRGPGGVWAA klisr SAA5_MOUSE : 24- 73: dgwys FFrEAvqGTwDLwRAYrDnleAnYqnADqYFYARGNYEAqqRGSGGIWAA kiist SAA_ANAPL : 10- 59: trggr FVlDAagGAwDMlRAYrDmreAnHigADkYFHARGNYDAarRGPGGAWAA rvisd SAA_BOVIN : 5- 54: qwms FFgEAyeGAkDMwRAYsDmreAnYkgADkYFHARGNYDAaqRGPGGAWAA kvisd SAA_CANFA : 23- 72: gqwys FVsEAaqGAwDMwRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAA kvisd SAA_FELCA : 5- 54: ewys FLgEAaqGAwDMwRAYsDmreAnYigADkYFHARGNYDAaqRGPGGAWAA kvisd SAA_HORSE : 4- 53: lls FLgEAarGTwDMlRAYnDmreAnYigADkYFHARGNYDAakRGPGGAWAA kvisd SAA_HUMAN : 24- 73: rsffs FLgEAfdGArDMwRAYsDmreAnYigSDkYFHARGNYDAakRGPGGVWAA eaisd SAA_MACMU : 6- 55: rswfs FLgEAydGArDMwRAYsDmkeAnYknSDkYFHARGNYDAaqRGPGGVWAA evisd SAA_RABIT : 24- 73: qgwfs FIgEAvrGAgDMwRAYsDmreAnYinADkYFHARGNYDAaqRGPGGVWAA kvisd SAA_SHEEP : 5- 54: qwls FLgEAyeGAkDMwRAYsDmreAnFkgADkYFHARGNYDAaqRGPGGVWAA evisn D 4: 125.8738 21( 21) D-[LM]-x-R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 34- 80: gqgtr DMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 34- 80: fqgag DMwRAYtDmkeAnWknSDkYFHARGNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 33- 79: aqgaw DMyRAYsDmieAkYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 34- 80: gqgtr DMwRAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 34- 80: fqgag DMwRAYtDmkeAgWkdGDkYFHARGNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 33- 79: vqgaw DMyRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 34- 80: gqgak DMwRAYsDmkeAnYkkSDkYFHARGNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 34- 80: gqgst DMwRAYsDmreAnWknSDkYFHARGNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 34- 80: gqgsr DMwRAYsDmkkAnWknSDkYFHARGNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 34- 80: gqgak DMwRAYsDmkeAnYknSDkYFHARGNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 34- 80: lqgvg DMgRAYwDimiSnHqnSNrYLYARGNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 34- 80: vqgtw DLwRAYrDnleAnYqnADqYFYARGNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 20- 66: aggaw DMlRAYrDmreAnHigADkYFHARGNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 15- 61: yegak DMwRAYsDmreAnYkgADkYFHARGNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 33- 79: aqgaw DMwRAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 15- 61: aqgaw DMwRAYsDmreAnYigADkYFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 14- 60: argtw DMlRAYnDmreAnYigADkYFHARGNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 34- 80: fdgar DMwRAYsDmreAnYigSDkYFHARGNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 16- 62: ydgar DMwRAYsDmkeAnYknSDkYFHARGNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 34- 80: vrgag DMwRAYsDmreAnYinADkYFHARGNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 15- 61: yegak DMwRAYsDmreAnFkgADkYFHARGNYDAaqRGPGGVWAAEvISnGR ealqg E 5: 118.1369 21( 21) R-A-Y-x-D-x(3)-[AS]-x-[FHWY]-x(2)-[AGS]-[DN]-x-Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 37- 80: trdmw RAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 37- 80: agdmw RAYtDmkeAnWknSDkYFHARGNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 36- 79: awdmy RAYsDmieAkYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 37- 80: trdmw RAYtDmreAnWknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 37- 80: agdmw RAYtDmkeAgWkdGDkYFHARGNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 36- 79: awdmy RAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 37- 80: akdmw RAYsDmkeAnYkkSDkYFHARGNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 37- 80: stdmw RAYsDmreAnWknSDkYFHARGNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 37- 80: srdmw RAYsDmkkAnWknSDkYFHARGNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 37- 80: akdmw RAYsDmkeAnYknSDkYFHARGNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 37- 80: vgdmg RAYwDimiSnHqnSNrYLYARGNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 37- 80: twdlw RAYrDnleAnYqnADqYFYARGNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 23- 66: awdml RAYrDmreAnHigADkYFHARGNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 18- 61: akdmw RAYsDmreAnYkgADkYFHARGNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 36- 79: awdmw RAYsDmreAnYknSDkYFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 18- 61: awdmw RAYsDmreAnYigADkYFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 17- 60: twdml RAYnDmreAnYigADkYFHARGNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 37- 80: ardmw RAYsDmreAnYigSDkYFHARGNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 19- 62: ardmw RAYsDmkeAnYknSDkYFHARGNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 37- 80: agdmw RAYsDmreAnYinADkYFHARGNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 18- 61: akdmw RAYsDmreAnFkgADkYFHARGNYDAaqRGPGGVWAAEvISnGR ealqg F 6: 90.2137 21( 21) Y-[FL]-[HY]-A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 53- 80: knsdk YFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 53- 80: knsdk YFHARGNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 52- 79: knsdk YFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 53- 80: knsdk YFHARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 53- 80: kdgdk YFHARGNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 52- 79: knsdk YFHARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 53- 80: kksdk YFHARGNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 53- 80: knsdk YFHARGNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 53- 80: knsdk YFHARGNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 53- 80: knsdk YFHARGNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 53- 80: qnsnr YLYARGNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 53- 80: qnadq YFYARGNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 39- 66: igadk YFHARGNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 34- 61: kgadk YFHARGNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 52- 79: knsdk YFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 34- 61: igadk YFHARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 33- 60: igadk YFHARGNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 53- 80: igsdk YFHARGNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 35- 62: knsdk YFHARGNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 53- 80: inadk YFHARGNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 34- 61: kgadk YFHARGNYDAaqRGPGGVWAAEvISnGR ealqg G 7: 79.6031 21( 21) A-R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 56- 80: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 56- 80: dkyfh ARGNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 55- 79: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 56- 80: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 56- 80: dkyfh ARGNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 55- 79: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 56- 80: dkyfh ARGNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 56- 80: dkyfh ARGNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 56- 80: dkyfh ARGNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 56- 80: dkyfh ARGNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 56- 80: nryly ARGNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 56- 80: dqyfy ARGNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 42- 66: dkyfh ARGNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 37- 61: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 55- 79: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 37- 61: dkyfh ARGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 36- 60: dkyfh ARGNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 56- 80: dkyfh ARGNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 38- 62: dkyfh ARGNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 56- 80: dkyfh ARGNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 37- 61: dkyfh ARGNYDAaqRGPGGVWAAEvISnGR ealqg H 8: 75.4330 21( 21) R-G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 57- 80: kyfha RGNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 57- 80: kyfha RGNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 56- 79: kyfha RGNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 57- 80: kyfha RGNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 57- 80: kyfha RGNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 56- 79: kyfha RGNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 57- 80: kyfha RGNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 57- 80: kyfha RGNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 57- 80: kyfha RGNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 57- 80: kyfha RGNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 57- 80: rylya RGNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 57- 80: qyfya RGNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 43- 66: kyfha RGNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 38- 61: kyfha RGNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 56- 79: kyfha RGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 38- 61: kyfha RGNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 37- 60: kyfha RGNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 57- 80: kyfha RGNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 39- 62: kyfha RGNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 57- 80: kyfha RGNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 38- 61: kyfha RGNYDAaqRGPGGVWAAEvISnGR ealqg I 9: 71.2630 21( 21) G-N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 58- 80: yfhar GNYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 58- 80: yfhar GNYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 57- 79: yfhar GNYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 58- 80: yfhar GNYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 58- 80: yfhar GNYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 57- 79: yfhar GNYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 58- 80: yfhar GNYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 58- 80: yfhar GNYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 58- 80: yfhar GNYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 58- 80: yfhar GNYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 58- 80: ylyar GNYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 58- 80: yfyar GNYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 44- 66: yfhar GNYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 39- 61: yfhar GNYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 57- 79: yfhar GNYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 39- 61: yfhar GNYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 38- 60: yfhar GNYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 58- 80: yfhar GNYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 40- 62: yfhar GNYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 58- 80: yfhar GNYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 39- 61: yfhar GNYDAaqRGPGGVWAAEvISnGR ealqg J 10: 67.0929 21( 21) N-Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 59- 80: fharg NYDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 59- 80: fharg NYDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 58- 79: fharg NYDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 59- 80: fharg NYDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 59- 80: fharg NYDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 58- 79: fharg NYDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 59- 80: fharg NYDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 59- 80: fharg NYDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 59- 80: fharg NYDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 59- 80: fharg NYDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 59- 80: lyarg NYDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 59- 80: fyarg NYEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 45- 66: fharg NYDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 40- 61: fharg NYDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 58- 79: fharg NYDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 40- 61: fharg NYDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 39- 60: fharg NYDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 59- 80: fharg NYDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 41- 62: fharg NYDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 59- 80: fharg NYDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 40- 61: fharg NYDAaqRGPGGVWAAEvISnGR ealqg K 11: 62.9229 21( 21) Y-[DE]-A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 60- 80: hargn YDAaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 60- 80: hargn YDAaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 59- 79: hargn YDAaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 60- 80: hargn YDAaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 60- 80: hargn YDAaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 59- 79: hargn YDAaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 60- 80: hargn YDAvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 60- 80: hargn YDAakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 60- 80: hargn YDAarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 60- 80: hargn YDAakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 60- 80: yargn YDAaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 60- 80: yargn YEAqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 46- 66: hargn YDAarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 41- 61: hargn YDAaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 59- 79: hargn YDAaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 41- 61: hargn YDAaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 40- 60: hargn YDAakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 60- 80: hargn YDAakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 42- 62: hargn YDAaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 60- 80: hargn YDAaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 41- 61: hargn YDAaqRGPGGVWAAEvISnGR ealqg L 12: 55.5822 21( 21) A-x(2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 62- 80: rgnyd AaqRGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 62- 80: rgnyd AaqRGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 61- 79: rgnyd AaqRGPGGAWAAKvISdAR ersqr SAA2_MESAU : 62- 80: rgnyd AaqRGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 62- 80: rgnyd AaqRGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 61- 79: rgnyd AaqRGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 62- 80: rgnyd AvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 62- 80: rgnyd AakRGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 62- 80: rgnyd AarRGPGGAWAAKvISdAR eavqk SAA3_RABIT : 62- 80: rgnyd AakRGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 62- 80: rgnyd AaqRGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 62- 80: rgnye AqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 48- 66: rgnyd AarRGPGGAWAARvISdAR enwqg SAA_BOVIN : 43- 61: rgnyd AaqRGPGGAWAAKvISdAR eniqr SAA_CANFA : 61- 79: rgnyd AaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 43- 61: rgnyd AaqRGPGGAWAAKvISdAR ensqr SAA_HORSE : 42- 60: rgnyd AakRGPGGAWAAKvISdAR enfqr SAA_HUMAN : 62- 80: rgnyd AakRGPGGVWAAEaISdAR eniqr SAA_MACMU : 44- 62: rgnyd AaqRGPGGVWAAEvISdAR eniqk SAA_RABIT : 62- 80: rgnyd AaqRGPGGVWAAKvISdVR edlqr SAA_SHEEP : 43- 61: rgnyd AaqRGPGGVWAAEvISnGR ealqg M 13: 55.0822 40( 21) A-x(1,2)-R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 40(21) SAA1_MESAU : 62- 80: rgnyd AaqRGPGGAWAAKvISdAR egfkr SAA1_MESAU : 63- 80: gnyda Aq-RGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 62- 80: rgnyd AaqRGPGGVWAAEkISdGR eafqe SAA1_MOUSE : 63- 80: gnyda Aq-RGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 61- 79: rgnyd AaqRGPGGAWAAKvISdAR ersqr SAA1_MUSVI : 62- 79: gnyda Aq-RGPGGAWAAKvISdAR ersqr SAA2_MESAU : 62- 80: rgnyd AaqRGPGGAWAAKvISdAR egfkr SAA2_MESAU : 63- 80: gnyda Aq-RGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 62- 80: rgnyd AaqRGPGGVWAAEkISdAR esfqe SAA2_MOUSE : 63- 80: gnyda Aq-RGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 61- 79: rgnyd AaqRGPGGAWAAKvISdAR ersqr SAA2_MUSVI : 62- 79: gnyda Aq-RGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 62- 80: rgnyd AvqRGPGGVWATEvISdAR envqr SAA3_MESAU : 62- 80: rgnyd AakRGPGGAWAAKvISdAR egiqr SAA3_MESAU : 63- 80: gnyda Ak-RGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 62- 80: rgnyd AarRGPGGAWAAKvISdAR eavqk SAA3_MOUSE : 63- 80: gnyda Ar-RGPGGAWAAKvISdAR eavqk SAA3_RABIT : 62- 80: rgnyd AakRGPGGVWAAEvISdAR enyqk SAA3_RABIT : 63- 80: gnyda Ak-RGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 62- 80: rgnyd AaqRGPGGVWAAKlISrSR vylqg SAA4_HUMAN : 63- 80: gnyda Aq-RGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 62- 80: rgnye AqqRGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 48- 66: rgnyd AarRGPGGAWAARvISdAR enwqg SAA_ANAPL : 49- 66: gnyda Ar-RGPGGAWAARvISdAR enwqg SAA_BOVIN : 43- 61: rgnyd AaqRGPGGAWAAKvISdAR eniqr SAA_BOVIN : 44- 61: gnyda Aq-RGPGGAWAAKvISdAR eniqr SAA_CANFA : 61- 79: rgnyd AaqRGPGGAWAAKvISdAR ensqr SAA_CANFA : 62- 79: gnyda Aq-RGPGGAWAAKvISdAR ensqr SAA_FELCA : 43- 61: rgnyd AaqRGPGGAWAAKvISdAR ensqr SAA_FELCA : 44- 61: gnyda Aq-RGPGGAWAAKvISdAR ensqr SAA_HORSE : 42- 60: rgnyd AakRGPGGAWAAKvISdAR enfqr SAA_HORSE : 43- 60: gnyda Ak-RGPGGAWAAKvISdAR enfqr SAA_HUMAN : 62- 80: rgnyd AakRGPGGVWAAEaISdAR eniqr SAA_HUMAN : 63- 80: gnyda Ak-RGPGGVWAAEaISdAR eniqr SAA_MACMU : 44- 62: rgnyd AaqRGPGGVWAAEvISdAR eniqk SAA_MACMU : 45- 62: gnyda Aq-RGPGGVWAAEvISdAR eniqk SAA_RABIT : 62- 80: rgnyd AaqRGPGGVWAAKvISdVR edlqr SAA_RABIT : 63- 80: gnyda Aq-RGPGGVWAAKvISdVR edlqr SAA_SHEEP : 43- 61: rgnyd AaqRGPGGVWAAEvISnGR ealqg SAA_SHEEP : 44- 61: gnyda Aq-RGPGGVWAAEvISnGR ealqg N 14: 51.4122 21( 21) R-G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 65- 80: ydaaq RGPGGAWAAKvISdAR egfkr SAA1_MOUSE : 65- 80: ydaaq RGPGGVWAAEkISdGR eafqe SAA1_MUSVI : 64- 79: ydaaq RGPGGAWAAKvISdAR ersqr SAA2_MESAU : 65- 80: ydaaq RGPGGAWAAKvISdAR egfkr SAA2_MOUSE : 65- 80: ydaaq RGPGGVWAAEkISdAR esfqe SAA2_MUSVI : 64- 79: ydaaq RGPGGAWAAKvISdAR ersqr SAA3_HUMAN : 65- 80: ydavq RGPGGVWATEvISdAR envqr SAA3_MESAU : 65- 80: ydaak RGPGGAWAAKvISdAR egiqr SAA3_MOUSE : 65- 80: ydaar RGPGGAWAAKvISdAR eavqk SAA3_RABIT : 65- 80: ydaak RGPGGVWAAEvISdAR enyqk SAA4_HUMAN : 65- 80: ydaaq RGPGGVWAAKlISrSR vylqg SAA5_MOUSE : 65- 80: yeaqq RGSGGIWAAKiIStSR kyfqg SAA_ANAPL : 51- 66: ydaar RGPGGAWAARvISdAR enwqg SAA_BOVIN : 46- 61: ydaaq RGPGGAWAAKvISdAR eniqr SAA_CANFA : 64- 79: ydaaq RGPGGAWAAKvISdAR ensqr SAA_FELCA : 46- 61: ydaaq RGPGGAWAAKvISdAR ensqr SAA_HORSE : 45- 60: ydaak RGPGGAWAAKvISdAR enfqr SAA_HUMAN : 65- 80: ydaak RGPGGVWAAEaISdAR eniqr SAA_MACMU : 47- 62: ydaaq RGPGGVWAAEvISdAR eniqk SAA_RABIT : 65- 80: ydaaq RGPGGVWAAKvISdVR edlqr SAA_SHEEP : 46- 61: ydaaq RGPGGVWAAEvISnGR ealqg O 15: 47.2421 21( 21) G-[PS]-G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 66- 80: daaqr GPGGAWAAKvISdAR egfkr SAA1_MOUSE : 66- 80: daaqr GPGGVWAAEkISdGR eafqe SAA1_MUSVI : 65- 79: daaqr GPGGAWAAKvISdAR ersqr SAA2_MESAU : 66- 80: daaqr GPGGAWAAKvISdAR egfkr SAA2_MOUSE : 66- 80: daaqr GPGGVWAAEkISdAR esfqe SAA2_MUSVI : 65- 79: daaqr GPGGAWAAKvISdAR ersqr SAA3_HUMAN : 66- 80: davqr GPGGVWATEvISdAR envqr SAA3_MESAU : 66- 80: daakr GPGGAWAAKvISdAR egiqr SAA3_MOUSE : 66- 80: daarr GPGGAWAAKvISdAR eavqk SAA3_RABIT : 66- 80: daakr GPGGVWAAEvISdAR enyqk SAA4_HUMAN : 66- 80: daaqr GPGGVWAAKlISrSR vylqg SAA5_MOUSE : 66- 80: eaqqr GSGGIWAAKiIStSR kyfqg SAA_ANAPL : 52- 66: daarr GPGGAWAARvISdAR enwqg SAA_BOVIN : 47- 61: daaqr GPGGAWAAKvISdAR eniqr SAA_CANFA : 65- 79: daaqr GPGGAWAAKvISdAR ensqr SAA_FELCA : 47- 61: daaqr GPGGAWAAKvISdAR ensqr SAA_HORSE : 46- 60: daakr GPGGAWAAKvISdAR enfqr SAA_HUMAN : 66- 80: daakr GPGGVWAAEaISdAR eniqr SAA_MACMU : 48- 62: daaqr GPGGVWAAEvISdAR eniqk SAA_RABIT : 66- 80: daaqr GPGGVWAAKvISdVR edlqr SAA_SHEEP : 47- 61: daaqr GPGGVWAAEvISnGR ealqg P 16: 39.8841 21( 21) G-G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 68- 80: aqrgp GGAWAAKvISdAR egfkr SAA1_MOUSE : 68- 80: aqrgp GGVWAAEkISdGR eafqe SAA1_MUSVI : 67- 79: aqrgp GGAWAAKvISdAR ersqr SAA2_MESAU : 68- 80: aqrgp GGAWAAKvISdAR egfkr SAA2_MOUSE : 68- 80: aqrgp GGVWAAEkISdAR esfqe SAA2_MUSVI : 67- 79: aqrgp GGAWAAKvISdAR ersqr SAA3_HUMAN : 68- 80: vqrgp GGVWATEvISdAR envqr SAA3_MESAU : 68- 80: akrgp GGAWAAKvISdAR egiqr SAA3_MOUSE : 68- 80: arrgp GGAWAAKvISdAR eavqk SAA3_RABIT : 68- 80: akrgp GGVWAAEvISdAR enyqk SAA4_HUMAN : 68- 80: aqrgp GGVWAAKlISrSR vylqg SAA5_MOUSE : 68- 80: qqrgs GGIWAAKiIStSR kyfqg SAA_ANAPL : 54- 66: arrgp GGAWAARvISdAR enwqg SAA_BOVIN : 49- 61: aqrgp GGAWAAKvISdAR eniqr SAA_CANFA : 67- 79: aqrgp GGAWAAKvISdAR ensqr SAA_FELCA : 49- 61: aqrgp GGAWAAKvISdAR ensqr SAA_HORSE : 48- 60: akrgp GGAWAAKvISdAR enfqr SAA_HUMAN : 68- 80: akrgp GGVWAAEaISdAR eniqr SAA_MACMU : 50- 62: aqrgp GGVWAAEvISdAR eniqk SAA_RABIT : 68- 80: aqrgp GGVWAAKvISdVR edlqr SAA_SHEEP : 49- 61: aqrgp GGVWAAEvISnGR ealqg Q 17: 35.7141 21( 21) G-[AIV]-W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 69- 80: qrgpg GAWAAKvISdAR egfkr SAA1_MOUSE : 69- 80: qrgpg GVWAAEkISdGR eafqe SAA1_MUSVI : 68- 79: qrgpg GAWAAKvISdAR ersqr SAA2_MESAU : 69- 80: qrgpg GAWAAKvISdAR egfkr SAA2_MOUSE : 69- 80: qrgpg GVWAAEkISdAR esfqe SAA2_MUSVI : 68- 79: qrgpg GAWAAKvISdAR ersqr SAA3_HUMAN : 69- 80: qrgpg GVWATEvISdAR envqr SAA3_MESAU : 69- 80: krgpg GAWAAKvISdAR egiqr SAA3_MOUSE : 69- 80: rrgpg GAWAAKvISdAR eavqk SAA3_RABIT : 69- 80: krgpg GVWAAEvISdAR enyqk SAA4_HUMAN : 69- 80: qrgpg GVWAAKlISrSR vylqg SAA5_MOUSE : 69- 80: qrgsg GIWAAKiIStSR kyfqg SAA_ANAPL : 55- 66: rrgpg GAWAARvISdAR enwqg SAA_BOVIN : 50- 61: qrgpg GAWAAKvISdAR eniqr SAA_CANFA : 68- 79: qrgpg GAWAAKvISdAR ensqr SAA_FELCA : 50- 61: qrgpg GAWAAKvISdAR ensqr SAA_HORSE : 49- 60: krgpg GAWAAKvISdAR enfqr SAA_HUMAN : 69- 80: krgpg GVWAAEaISdAR eniqr SAA_MACMU : 51- 62: qrgpg GVWAAEvISdAR eniqk SAA_RABIT : 69- 80: qrgpg GVWAAKvISdVR edlqr SAA_SHEEP : 50- 61: qrgpg GVWAAEvISnGR ealqg R 18: 28.8786 21( 21) W-A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 71- 80: gpgga WAAKvISdAR egfkr SAA1_MOUSE : 71- 80: gpggv WAAEkISdGR eafqe SAA1_MUSVI : 70- 79: gpgga WAAKvISdAR ersqr SAA2_MESAU : 71- 80: gpgga WAAKvISdAR egfkr SAA2_MOUSE : 71- 80: gpggv WAAEkISdAR esfqe SAA2_MUSVI : 70- 79: gpgga WAAKvISdAR ersqr SAA3_HUMAN : 71- 80: gpggv WATEvISdAR envqr SAA3_MESAU : 71- 80: gpgga WAAKvISdAR egiqr SAA3_MOUSE : 71- 80: gpgga WAAKvISdAR eavqk SAA3_RABIT : 71- 80: gpggv WAAEvISdAR enyqk SAA4_HUMAN : 71- 80: gpggv WAAKlISrSR vylqg SAA5_MOUSE : 71- 80: gsggi WAAKiIStSR kyfqg SAA_ANAPL : 57- 66: gpgga WAARvISdAR enwqg SAA_BOVIN : 52- 61: gpgga WAAKvISdAR eniqr SAA_CANFA : 70- 79: gpgga WAAKvISdAR ensqr SAA_FELCA : 52- 61: gpgga WAAKvISdAR ensqr SAA_HORSE : 51- 60: gpgga WAAKvISdAR enfqr SAA_HUMAN : 71- 80: gpggv WAAEaISdAR eniqr SAA_MACMU : 53- 62: gpggv WAAEvISdAR eniqk SAA_RABIT : 71- 80: gpggv WAAKvISdVR edlqr SAA_SHEEP : 52- 61: gpggv WAAEvISnGR ealqg S 19: 28.4935 35( 21) E-A-x(5)-D-x(3,4)-A-x(2,4)-D-x(4)-[GN]-x(2)-[GN]-[ASV] Occurences: 35(21) SAA1_MESAU : 27- 50: fqfmk EAgqgtrDmwr-Ayt--DmreaNwkNS dkyfh SAA1_MESAU : 44- 70: ytdmr EAnwknsDkyfhArgnyDaaqrGpgGA waakv SAA1_MOUSE : 27- 50: fsfvh EAfqgagDmwr-Ayt--DmkeaNwkNS dkyfh SAA1_MOUSE : 44- 70: ytdmk EAnwknsDkyfhArgnyDaaqrGpgGV waaek SAA1_MUSVI : 43- 69: ysdmi EAkyknsDkyfhArgnyDaaqrGpgGA waakv SAA2_MESAU : 27- 50: fqfmk EAgqgtrDmwr-Ayt--DmreaNwkNS dkyfh SAA2_MESAU : 44- 70: ytdmr EAnwknsDkyfhArgnyDaaqrGpgGA waakv SAA2_MOUSE : 44- 70: ytdmk EAgwkdgDkyfhArgnyDaaqrGpgGV waaek SAA2_MUSVI : 26- 49: ysfig EAvqgawDmyr-Ays--DmreaNykNS dkyfh SAA2_MUSVI : 43- 69: ysdmr EAnyknsDkyfhArgnyDaaqrGpgGA waakv SAA3_HUMAN : 44- 70: ysdmk EAnykksDkyfhArgnyDavqrGpgGV watev SAA3_MESAU : 27- 50: fqfmk EAgqgstDmwr-Ays--DmreaNwkNS dkyfh SAA3_MESAU : 44- 70: ysdmr EAnwknsDkyfhArgnyDaakrGpgGA waakv SAA3_MOUSE : 27- 50: vqfmk EAgqgsrDmwr-Ays--DmkkaNwkNS dkyfh SAA3_RABIT : 27- 50: ltflk EAgqgakDmwr-Ays--DmkeaNykNS dkyfh SAA3_RABIT : 44- 70: ysdmk EAnyknsDkyfhArgnyDaakrGpgGV waaev SAA4_HUMAN : 27- 50: rsffk EAlqgvgDmgr-Ayw--DimisNhqNS nryly SAA5_MOUSE : 27- 50: ysffr EAvqgtwDlwr-Ayr--DnleaNyqNA dqyfy SAA_ANAPL : 30- 56: yrdmr EAnhigaDkyfhArgnyDaarrGpgGA waarv SAA_BOVIN : 8- 31: msffg EAyegakDmwr-Ays--DmreaNykGA dkyfh SAA_BOVIN : 25- 51: ysdmr EAnykgaDkyfhArgnyDaaqrGpgGA waakv SAA_CANFA : 26- 49: ysfvs EAaqgawDmwr-Ays--DmreaNykNS dkyfh SAA_CANFA : 43- 69: ysdmr EAnyknsDkyfhArgnyDaaqrGpgGA waakv SAA_FELCA : 8- 31: ysflg EAaqgawDmwr-Ays--DmreaNyiGA dkyfh SAA_FELCA : 25- 51: ysdmr EAnyigaDkyfhArgnyDaaqrGpgGA waakv SAA_HORSE : 7- 30: lsflg EAargtwDmlr-Ayn--DmreaNyiGA dkyfh SAA_HORSE : 24- 50: yndmr EAnyigaDkyfhArgnyDaakrGpgGA waakv SAA_HUMAN : 27- 50: fsflg EAfdgarDmwr-Ays--DmreaNyiGS dkyfh SAA_HUMAN : 44- 70: ysdmr EAnyigsDkyfhArgnyDaakrGpgGV waaea SAA_MACMU : 9- 32: fsflg EAydgarDmwr-Ays--DmkeaNykNS dkyfh SAA_MACMU : 26- 52: ysdmk EAnyknsDkyfhArgnyDaaqrGpgGV waaev SAA_RABIT : 27- 50: fsfig EAvrgagDmwr-Ays--DmreaNyiNA dkyfh SAA_RABIT : 44- 70: ysdmr EAnyinaDkyfhArgnyDaaqrGpgGV waakv SAA_SHEEP : 8- 31: lsflg EAyegakDmwr-Ays--DmreaNfkGA dkyfh SAA_SHEEP : 25- 51: ysdmr EAnfkgaDkyfhArgnyDaaqrGpgGV waaev T 20: 24.7085 21( 21) A-[AT]-[EKR]-x-I-S-x-[AGSV]-R Occurences: 21(21) SAA1_MESAU : 72- 80: pggaw AAKvISdAR egfkr SAA1_MOUSE : 72- 80: pggvw AAEkISdGR eafqe SAA1_MUSVI : 71- 79: pggaw AAKvISdAR ersqr SAA2_MESAU : 72- 80: pggaw AAKvISdAR egfkr SAA2_MOUSE : 72- 80: pggvw AAEkISdAR esfqe SAA2_MUSVI : 71- 79: pggaw AAKvISdAR ersqr SAA3_HUMAN : 72- 80: pggvw ATEvISdAR envqr SAA3_MESAU : 72- 80: pggaw AAKvISdAR egiqr SAA3_MOUSE : 72- 80: pggaw AAKvISdAR eavqk SAA3_RABIT : 72- 80: pggvw AAEvISdAR enyqk SAA4_HUMAN : 72- 80: pggvw AAKlISrSR vylqg SAA5_MOUSE : 72- 80: sggiw AAKiIStSR kyfqg SAA_ANAPL : 58- 66: pggaw AARvISdAR enwqg SAA_BOVIN : 53- 61: pggaw AAKvISdAR eniqr SAA_CANFA : 71- 79: pggaw AAKvISdAR ensqr SAA_FELCA : 53- 61: pggaw AAKvISdAR ensqr SAA_HORSE : 52- 60: pggaw AAKvISdAR enfqr SAA_HUMAN : 72- 80: pggvw AAEaISdAR eniqr SAA_MACMU : 54- 62: pggvw AAEvISdAR eniqk SAA_RABIT : 72- 80: pggvw AAKvISdVR edlqr SAA_SHEEP : 53- 61: pggvw AAEvISnGR ealqg Number of patterns evaluated by Pratt:2040 Total running time: 1 seconds