------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 48 sequences from file RIBOSOMAL_S7 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 48 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_S7.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: RS5_HUMAN 204 RS5_PODCA 210 RS5_RAT 204 RS5_YEAST 224 RS7_ANANI 156 RS7_ASTLO 178 RS7_BACST 155 RS7_BACSU 27 RS7_CHLTR 157 RS7_CRYPH 156 RS7_CUSEU 155 RS7_CUSRE 155 RS7_CYAPA 156 RS7_DESMO 170 RS7_ECOLI 178 RS7_EIKCO 157 RS7_EPIVI 155 RS7_EUGGR 155 RS7_HAEIN 155 RS7_HALHA 210 RS7_HALMA 205 RS7_HALMO 203 RS7_LEPBI 158 RS7_MAIZE 156 RS7_MARPO 155 RS7_METVA 194 RS7_MICLU 156 RS7_MYCIT 8 RS7_MYCLE 155 RS7_MYCSM 155 RS7_MYCTU 12 RS7_ORYSA 156 RS7_PINTH 155 RS7_RICPR 160 RS7_SALTY 155 RS7_SOYBN 155 RS7_SPIMX 155 RS7_SPIPL 156 RS7_SULAC 195 RS7_SULSO 193 RS7_THECE 215 RS7_THEMA 108 RS7_THETH 155 RS7_TOBAC 155 RT07_ACACA 337 RT07_MARPO 230 RT07_PROWI 222 RT07_WHEAT 148 Pratt run started at Thu Feb 6 21:06:30 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 7.8401 102( 48) G-x(3,4)-K 2: 7.8401 176( 48) R-x(3,4)-A 3: 7.3401 237( 48) A-x(0,2)-K 4: 7.3401 176( 48) R-x(0,2)-K 5: 7.3401 195( 48) R-x(1,3)-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 7.8401 102( 48) G-x(3,4)-K B 2: 7.8401 176( 48) R-x(3,4)-A C 3: 7.3401 237( 48) A-x(0,2)-K D 4: 7.3401 176( 48) R-x(0,2)-K E 5: 7.3401 195( 48) R-x(1,3)-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 7.8401 102( 48) G-x(3,4)-K Occurences: 102(48) RS5_HUMAN : 80- 85: smmmh GrnngK klmtv RS5_PODCA : 86- 91: slmmh GrnngK klmav RS5_RAT : 80- 85: smmmh GrnngK klmtv RS5_YEAST : 74- 79: vahta GryanK rfrka RS5_YEAST : 100- 105: slmmn GrnngK klkav RS5_YEAST : 104- 108: ngrnn Gkkl-K avrii RS7_ANANI : 132- 137: aanet GssvrK reetd RS7_ASTLO : 83- 87: qkrkk Gqis-K isikt RS7_ASTLO : 133- 138: aynnt GaavqK keeie RS7_BACST : 4- 8: prr Gpva-K rdvlp RS7_BACST : 33- 37: kimid Gkks-K aqkil RS7_BACST : 54- 59: irert GkdpmK vfeqa RS7_BACST : 131- 135: aannt Gaav-K kredt RS7_BACST : 131- 136: aannt GaavkK redth RS7_BACSU : 4- 8: prk Gpva-K rdvlp RS7_CHLTR : 133- 137: cfnkq Gati-K kredt RS7_CHLTR : 133- 138: cfnkq GatikK redth RS7_CRYPH : 132- 137: aanet GssirK reeih RS7_CUSEU : 5- 9: msrr Gtae-K kkaks RS7_CUSEU : 5- 10: msrr GtaekK kaksd RS7_CUSEU : 132- 137: aakgr GdairK keeth RS7_CUSRE : 5- 9: msrr Gtae-K ktaks RS7_CUSRE : 5- 10: msrr GtaekK taksd RS7_CUSRE : 92- 97: vpvei GstqgK alavr RS7_CUSRE : 132- 137: aakgs GdairK keeth RS7_CYAPA : 132- 136: aanet Gnti-K kreem RS7_CYAPA : 132- 137: aanet GntikK reemh RS7_DESMO : 46- 51: kvmrp GrnmgK khlay RS7_DESMO : 123- 127: rhlte Garm-K afhsp RS7_ECOLI : 131- 135: aaenk Gtav-K kredv RS7_ECOLI : 131- 136: aaenk GtavkK redvh RS7_ECOLI : 166- 170: fshqa Gass-K qpalg RS7_EIKCO : 133- 137: aaegr Ggam-K kreev RS7_EIKCO : 133- 138: aaegr GgamkK reevh RS7_EIKCO : 134- 138: aegrg Gamk-K reevh RS7_EPIVI : 5- 10: msrr GtaeeK takpd RS7_EPIVI : 92- 97: vpiei GstqgK alavr RS7_EPIVI : 132- 137: aakgs GdairK keeth RS7_EUGGR : 114- 118: erkgr Gist-K lknei RS7_EUGGR : 131- 135: asnnt Geav-K kkeei RS7_EUGGR : 131- 136: asnnt GeavkK keeih RS7_HAEIN : 131- 135: asdnk Gaav-K kredv RS7_HAEIN : 131- 136: asdnk GaavkK redvh RS7_HALHA : 60- 65: vahtm GrhaqK qfkks RS7_HALHA : 86- 91: rlmkt GanagK kqqal RS7_HALHA : 197- 202: qtyai GqkkeK ervaa RS7_HALMA : 55- 60: iahtm GrhadK qfkks RS7_HALMA : 133- 138: rlkyg GisvpK avdva RS7_HALMA : 161- 165: aegvy Ggsf-K tttta RS7_HALMO : 53- 58: vehtm GrhagK qfqks RS7_HALMO : 57- 62: mgrha GkqfqK seisi RS7_LEPBI : 134- 138: aqkgt Gsai-K kkedi RS7_LEPBI : 134- 139: aqkgt GsaikK kedir RS7_MAIZE : 5- 9: msrr Gtae-K rtaks RS7_MAIZE : 83- 87: rrnkk Gstr-K vpiei RS7_MAIZE : 133- 138: aakgs GgairK keath RS7_MAIZE : 134- 138: akgsg Gair-K keath RS7_MAIZE : 134- 139: akgsg GairkK eathr RS7_MARPO : 106- 110: irwll Gasr-K rsgqn RS7_MARPO : 132- 137: aardn GiairK keeth RS7_METVA : 43- 47: iphta Grns-K kmfdk RS7_METVA : 43- 48: iphta GrnskK mfdkn RS7_METVA : 150- 155: lgasq GahksK ksiaq RS7_MICLU : 4- 8: prk Gpap-K rplvv RS7_MICLU : 48- 52: ygale Gara-K ngars RS7_MICLU : 59- 63: garsr Ghpi-K kamdn RS7_MICLU : 59- 64: garsr GhpikK amdni RS7_MICLU : 132- 136: asngl Ggav-K rredt RS7_MYCIT : 4- 8: prk Gpap-K RS7_MYCLE : 4- 8: prk Gpap-K rplvk RS7_MYCLE : 131- 135: asngl Gasv-K rredt RS7_MYCSM : 4- 8: prk Gpap-K rplvn RS7_MYCSM : 131- 135: asngl Gasv-K rredt RS7_MYCTU : 4- 8: prk Gpap-K rplv RS7_ORYSA : 5- 9: msrr Gtae-K rtaks RS7_ORYSA : 83- 87: rrnkk Gstr-K vpiei RS7_ORYSA : 133- 138: aakgg GgairK keath RS7_ORYSA : 134- 138: akggg Gair-K keath RS7_ORYSA : 134- 139: akggg GairkK eathr RS7_PINTH : 106- 110: irwll Gasr-K rpgrn RS7_PINTH : 132- 137: aargn GnairK keeth RS7_RICPR : 132- 136: asnnr Gvai-K kkedt RS7_RICPR : 132- 137: asnnr GvaikK kedth RS7_SALTY : 131- 135: aadnk Gtav-K kredv RS7_SALTY : 131- 136: aadnk GtavkK redvh RS7_SOYBN : 5- 10: msrr GtaeeK taksd RS7_SOYBN : 92- 97: vpvei GstqgK alair RS7_SOYBN : 106- 110: irwll Gasr-K rpgrn RS7_SOYBN : 132- 137: aakgs GdairK keeth RS7_SPIMX : 132- 137: aarqt GnairK reeth RS7_SPIPL : 132- 137: aanet GsavrK reeth RS7_SULAC : 16- 21: nvkvf GkwdtK vevrd RS7_SULAC : 71- 76: nlmrp GrnkgK kmlay RS7_SULSO : 69- 74: qimrp GrnkgK khlay RS7_THECE : 49- 53: lphsh Grha-K kafgk RS7_THECE : 49- 54: lphsh GrhakK afgka RS7_THECE : 75- 80: kvmrs GatshK agghf RS7_THECE : 168- 172: knial Gasa-K cyrnk RS7_THEMA : 65- 69: arakk Grpm-K eklae RS7_THEMA : 84- 88: aynnt Gtai-K kkedt RS7_THEMA : 84- 89: aynnt GtaikK kedth RS7_THETH : 54- 59: iqekt GqeplK vfkqa RS7_THETH : 131- 135: aaegk Ggav-K kkedv RS7_THETH : 131- 136: aaegk GgavkK kedve RS7_THETH : 132- 136: aegkg Gavk-K kedve RS7_THETH : 132- 137: aegkg GavkkK edver RS7_TOBAC : 5- 9: msrr Gtae-K ktaks RS7_TOBAC : 5- 10: msrr GtaekK taksd RS7_TOBAC : 92- 97: vpiei GstqgK alair RS7_TOBAC : 132- 137: aakgs GdairK keeth RT07_ACACA : 2- 6: m Girl-K knfkr RT07_ACACA : 2- 7: m GirlkK nfkrf RT07_ACACA : 55- 60: rrnkk GkfrvK klrlg RT07_ACACA : 176- 180: vlary Gkif-K nkkkk RT07_ACACA : 259- 264: kvmfi GgkkyK iptlm RT07_ACACA : 260- 264: vmfig Gkky-K iptlm RT07_ACACA : 307- 311: slkne Gsli-K yrkey RT07_MARPO : 85- 89: lgyir Glng-K qkqli RT07_MARPO : 125- 129: rlaph Gdvi-K llvna RT07_MARPO : 205- 209: asqkm Giar-K krddl RT07_MARPO : 205- 210: asqkm GiarkK rddlh RT07_PROWI : 72- 77: llgii GqlspK nsied RT07_PROWI : 197- 202: aylkq GkarqK rdelh RT07_WHEAT : 94- 98: irwil Gaaf-K rrisy RT07_WHEAT : 123- 127: ayrkr Gisr-K rrenl B 2: 7.8401 176( 48) R-x(3,4)-A Occurences: 176(48) RS5_HUMAN : 55- 60: phsag RyaanA frkaq RS5_HUMAN : 91- 96: klmtv RivkhA feiih RS5_HUMAN : 127- 131: redst Rigr-A gtvrr RS5_HUMAN : 145- 150: dvspl RrvnqA iwllc RS5_HUMAN : 146- 150: vsplr Rvnq-A iwllc RS5_PODCA : 66- 70: ryavk Rfrk-A qcpiv RS5_PODCA : 133- 137: redst Rigr-A gtvrr RS5_PODCA : 151- 156: dvapl RrvnqA iwllc RS5_PODCA : 152- 156: vaplr Rvnq-A iwllc RS5_RAT : 91- 96: klmtv RivkhA feiih RS5_RAT : 127- 131: redst Rigr-A gtvrr RS5_RAT : 145- 150: dvspl RrvnqA iwllc RS5_RAT : 146- 150: vsplr Rvnq-A iwllc RS5_YEAST : 80- 84: ryank Rfrk-A qcpii RS5_YEAST : 165- 170: dvspl RrvnqA iallt RS5_YEAST : 166- 170: vsplr Rvnq-A iallt RS7_ANANI : 3- 7: ms Rrts-A qkrsv RS7_ANANI : 41- 46: kslaf RilysA fdliq RS7_ANANI : 78- 83: vevra RrvggA tyqvp RS7_ANANI : 79- 83: evrar Rvgg-A tyqvp RS7_ANANI : 95- 100: evrse RgtamA lrwlv RS7_ASTLO : 96- 101: ktkle RrnkiA lkfii RS7_ASTLO : 97- 101: tkler Rnki-A lkfii RS7_BACST : 2- 7: p RrgpvA krdvl RS7_BACST : 3- 7: pr Rgpv-A krdvl RS7_BACST : 77- 82: levra RrvggA nyqvp RS7_BACST : 78- 82: evrar Rvgg-A nyqvp RS7_BACSU : 2- 7: p RkgpvA krdvl RS7_CHLTR : 3- 7: ms Rrha-A ekkvi RS7_CHLTR : 79- 84: levrs RrvggA tyqvp RS7_CHLTR : 80- 84: evrsr Rvgg-A tyqvp RS7_CHLTR : 96- 101: evapd RrsclA mqwii RS7_CHLTR : 97- 101: vapdr Rscl-A mqwii RS7_CHLTR : 144- 148: redth Rmae-A nkafa RS7_CRYPH : 41- 46: khlaq RiiynA fdiik RS7_CRYPH : 53- 58: diikq RtgedA ilvfe RS7_CRYPH : 95- 100: evraf RgtnlA lrwit RS7_CRYPH : 143- 147: reeih Rmae-A nkafa RS7_CUSEU : 3- 7: ms Rrgt-A ekkka RS7_CUSEU : 102- 106: kalav Rwll-A asrkr RS7_CUSEU : 102- 107: kalav RwllaA srkrp RS7_CUSEU : 143- 147: keeth Rmae-A nrafa RS7_CUSRE : 3- 7: ms Rrgt-A ekkta RS7_CUSRE : 102- 106: kalav Rwll-A asrkr RS7_CUSRE : 102- 107: kalav RwllaA srkrp RS7_CUSRE : 143- 147: keeth Rmae-A nrafa RS7_CYAPA : 3- 7: ms Rrst-A kkrli RS7_CYAPA : 95- 100: evrvd RgitlA lrvvn RS7_CYAPA : 143- 147: reemh Rmae-A nkafv RS7_DESMO : 80- 85: iqvlv RaienA apree RS7_DESMO : 111- 116: dvapl RridlA lrhlt RS7_DESMO : 112- 116: vaplr Ridl-A lrhlt RS7_ECOLI : 94- 99: evrpv RrnalA mrwiv RS7_ECOLI : 95- 99: vrpvr Rnal-A mrwiv RS7_ECOLI : 101- 106: nalam RwiveA arkrg RS7_ECOLI : 142- 146: redvh Rmae-A nkafa RS7_EIKCO : 41- 46: ksvde RivygA leqta RS7_EIKCO : 79- 84: vevks RrvggA nyqvp RS7_EIKCO : 80- 84: evksr Rvgg-A nyqvp RS7_EIKCO : 96- 101: evrps RrlalA mrwvr RS7_EIKCO : 97- 101: vrpsr Rlal-A mrwvr RS7_EIKCO : 103- 108: lalam RwvrdA arkrg RS7_EIKCO : 144- 148: reevh Rmae-A nkafs RS7_EPIVI : 3- 7: ms Rrgt-A eekta RS7_EPIVI : 102- 107: kalav RwllvA skkrp RS7_EUGGR : 2- 6: s Rrrr-A kkrii RS7_EUGGR : 94- 99: evked RgtslA lkfii RS7_HAEIN : 3- 8: pr RrsveA rkilp RS7_HAEIN : 4- 8: prr Rsve-A rkilp RS7_HAEIN : 101- 106: nalgm RwiveA arkrg RS7_HAEIN : 142- 146: redvh Rmae-A nkafa RS7_HALHA : 47- 51: edpst Rryl-A vtpva RS7_HALHA : 151- 156: dtapq RrvdqA lkfla RS7_HALHA : 152- 156: tapqr Rvdq-A lkfla RS7_HALHA : 204- 208: kkeke Rvaa-A ar RS7_HALHA : 204- 209: kkeke RvaaaA r RS7_HALMA : 146- 151: dvapq RrvdqA lkfla RS7_HALMA : 147- 151: vapqr Rvdq-A lkfla RS7_HALMA : 199- 203: keeke Rvaa-A ar RS7_HALMA : 199- 204: keeke RvaaaA r RS7_HALMO : 90- 95: kqqat RivrnA fdlia RS7_HALMO : 144- 149: dvapq RrvdqA lkfia RS7_HALMO : 145- 149: vapqr Rvdq-A lkfia RS7_HALMO : 197- 201: keeke Rvaa-A ar RS7_HALMO : 197- 202: keeke RvaaaA r RS7_LEPBI : 95- 100: qskfv RerrlA lgirw RS7_LEPBI : 144- 149: kkedi RkmadA nkafs RS7_MAIZE : 3- 7: ms Rrgt-A ekrta RS7_MAIZE : 103- 108: ralai RwlleA sqkrp RS7_MAIZE : 137- 141: sggai Rkke-A thrma RS7_MAIZE : 144- 148: keath Rmae-A nrala RS7_MARPO : 3- 7: ms Rksi-A ekqva RS7_MARPO : 41- 46: kslay RilykA mknik RS7_MARPO : 102- 107: kalai RwllgA srkrs RS7_MARPO : 129- 134: lidaa RdngiA irkke RS7_METVA : 134- 139: dvsps RrldtA frnis RS7_METVA : 135- 139: vspsr Rldt-A frnis RS7_METVA : 188- 193: keeke RvaqsA r RS7_MICLU : 2- 6: p Rkgp-A pkrpl RS7_MICLU : 40- 45: kstae RivygA legar RS7_MICLU : 50- 55: alega RakngA rsrgh RS7_MICLU : 78- 83: levrs RrvggA tyqvp RS7_MICLU : 79- 83: evrsr Rvgg-A tyqvp RS7_MICLU : 95- 100: evkpg RstalA lrwlv RS7_MYCIT : 2- 6: p Rkgp-A pk RS7_MYCLE : 2- 6: p Rkgp-A pkrpl RS7_MYCLE : 40- 45: kslae RivygA lehar RS7_MYCLE : 77- 82: levrs RrvggA tyqvp RS7_MYCLE : 78- 82: evrsr Rvgg-A tyqvp RS7_MYCLE : 94- 99: evrpd RsttlA lrwlv RS7_MYCSM : 2- 6: p Rkgp-A pkrpl RS7_MYCSM : 40- 45: kslae RivygA leqar RS7_MYCSM : 77- 82: levrs RrvggA tyqvp RS7_MYCSM : 78- 82: evrsr Rvgg-A tyqvp RS7_MYCSM : 94- 99: evrpd RsttlA lrwlv RS7_MYCTU : 2- 6: p Rkgp-A pkrpl RS7_ORYSA : 3- 7: ms Rrgt-A ekrta RS7_ORYSA : 103- 108: ralai RwlleA sqkrp RS7_ORYSA : 137- 141: gggai Rkke-A thrma RS7_ORYSA : 144- 148: keath Rmae-A nrala RS7_PINTH : 3- 7: ms Rrst-A ekkta RS7_PINTH : 41- 46: kslay RilyrA ikkiq RS7_PINTH : 102- 107: kvlai RwllgA srkrp RS7_PINTH : 129- 134: lmdaa RgngnA irkke RS7_PINTH : 143- 147: keeth Rmae-A nrafa RS7_RICPR : 3- 7: ms Rrhv-A ekrii RS7_RICPR : 79- 83: evtsv Rvgg-A nyqvp RS7_RICPR : 94- 98: thvde Rrgy-A lasrw RS7_RICPR : 95- 100: hvder RgyalA srwii RS7_RICPR : 102- 107: yalas RwiinA askrs RS7_SALTY : 94- 99: evrpv RrnalA mrwiv RS7_SALTY : 95- 99: vrpvr Rnal-A mrwiv RS7_SALTY : 101- 106: nalam RwiveA arkrg RS7_SALTY : 142- 146: redvh Rmae-A nkafa RS7_SOYBN : 3- 7: ms Rrgt-A eekta RS7_SOYBN : 102- 107: kalai RwllgA srkrp RS7_SOYBN : 143- 147: keeth Rmae-A nrafa RS7_SPIMX : 41- 46: kslgy RilytA lktik RS7_SPIMX : 102- 107: ralai RwllsA arkrs RS7_SPIMX : 129- 134: lmdaa RqtgnA irkre RS7_SPIMX : 143- 147: reeth Rmae-A nrafa RS7_SPIPL : 78- 83: vevka RrvggA tyqvp RS7_SPIPL : 79- 83: evkar Rvgg-A tyqvp RS7_SPIPL : 95- 100: evrse RgttlA lrwli RS7_SPIPL : 143- 147: reeth Rmae-A nkafa RS7_SULAC : 105- 110: iqvlv RaienA apree RS7_SULAC : 136- 141: dvapq RrvdlA lrhlv RS7_SULAC : 137- 141: vapqr Rvdl-A lrhlv RS7_SULSO : 48- 53: grheh RrfgkA kvpiv RS7_SULSO : 49- 53: rhehr Rfgk-A kvpiv RS7_SULSO : 134- 139: dvapq RridlA lrhia RS7_SULSO : 135- 139: vapqr Ridl-A lrhia RS7_THECE : 50- 55: phshg RhakkA fgkan RS7_THECE : 145- 149: afggi Ryhm-A vdvsp RS7_THECE : 156- 161: dvspl RrldiA lknia RS7_THECE : 157- 161: vsplr Rldi-A lknia RS7_THEMA : 30- 35: levrp RrvggA tyqvp RS7_THEMA : 31- 35: evrpr Rvgg-A tyqvp RS7_THEMA : 47- 52: evqep RrtslA lrwiv RS7_THEMA : 48- 52: vqepr Rtsl-A lrwiv RS7_THEMA : 54- 59: tslal RwivqA arakk RS7_THEMA : 95- 99: kedth Rmae-A nrafa RS7_THETH : 2- 6: a Rrrr-A evrql RS7_THETH : 40- 45: knlaa RifydA ckiiq RS7_THETH : 77- 82: mevrs RrvggA nyqvp RS7_THETH : 78- 82: evrsr Rvgg-A nyqvp RS7_THETH : 94- 99: evspr RqqslA lrwlv RS7_THETH : 101- 106: qslal RwlvqA anqrp RS7_THETH : 110- 115: qaanq RperrA avria RS7_THETH : 142- 146: kedve Rmae-A nraya RS7_TOBAC : 3- 7: ms Rrgt-A ekkta RS7_TOBAC : 102- 106: kalai Rwll-A asrkr RS7_TOBAC : 102- 107: kalai RwllaA srkrp RS7_TOBAC : 143- 147: keeth Rmae-A nrafa RT07_ACACA : 141- 146: infta RhfrtA nsfyk RT07_MARPO : 52- 57: clshr RylcyA legll RT07_MARPO : 67- 71: lpsrp Rgrr-A stync RT07_MARPO : 164- 169: iiatn RqetlA irwml RT07_PROWI : 138- 143: psvel RkvrrA gntfl RT07_WHEAT : 25- 30: midgk RtrvrA ivykt RT07_WHEAT : 83- 88: ivard RqqtlA irwil RT07_WHEAT : 90- 95: qtlai RwilgA afkrr C 3: 7.3401 237( 48) A-x(0,2)-K Occurences: 237(48) RS5_HUMAN : 40- 42: lqdyi Av-K ekyak RS5_HUMAN : 46- 47: vkeky A--K ylphs RS5_HUMAN : 60- 63: ryaan AfrK aqcpi RS5_HUMAN : 180- 182: delin Aa-K gssns RS5_HUMAN : 181- 182: elina A--K gssns RS5_HUMAN : 189- 191: ssnsy Ai-K kkdel RS5_HUMAN : 189- 192: ssnsy AikK kdele RS5_HUMAN : 200- 201: elerv A--K snr RS5_PODCA : 46- 48: ltdyi Av-K dnhav RS5_PODCA : 63- 65: taary Av-K rfrka RS5_PODCA : 195- 197: ssnsy Ai-K kkdel RS5_PODCA : 195- 198: ssnsy AikK kdele RS5_PODCA : 206- 207: elerv A--K snr RS5_RAT : 40- 42: lqdyi Av-K ekyak RS5_RAT : 46- 47: vkeky A--K ylphs RS5_RAT : 180- 182: delin Ar-K gssns RS5_RAT : 189- 191: ssnsy Ai-K kkdel RS5_RAT : 189- 192: ssnsy AikK kdele RS5_RAT : 200- 201: elerv A--K snr RS5_YEAST : 77- 79: tagry An-K rfrka RS5_YEAST : 200- 202: eelin Aa-K gssts RS5_YEAST : 201- 202: elina A--K gssts RS5_YEAST : 209- 211: sstsy Ai-K kkdel RS5_YEAST : 209- 212: sstsy AikK kdele RS5_YEAST : 220- 221: elerv A--K snr RS7_ANANI : 7- 9: srrts Aq-K rsvnp RS7_ANANI : 117- 119: pgksm Ai-K lanel RS7_ANANI : 147- 149: dkmae An-K afahy RS7_ASTLO : 101- 103: rrnki Al-K fiins RS7_ASTLO : 109- 110: fiins A--K krsek RS7_ASTLO : 109- 111: fiins Ak-K rsekn RS7_ASTLO : 135- 138: nntga AvqK keeie RS7_BACST : 7- 8: rrgpv A--K rdvlp RS7_BACST : 38- 40: gkksk Aq-K ilyta RS7_BACST : 64- 66: kvfeq Al-K nvmpv RS7_BACST : 132- 135: anntg AavK kredt RS7_BACST : 133- 135: nntga Av-K kredt RS7_BACST : 133- 136: nntga AvkK redth RS7_BACST : 146- 148: hkmae An-K afahy RS7_BACSU : 7- 8: rkgpv A--K rdvlp RS7_CHLTR : 6- 9: msrrh AaeK kvipg RS7_CHLTR : 7- 9: srrha Ae-K kvipg RS7_CHLTR : 7- 10: srrha AekK vipgd RS7_CHLTR : 39- 41: gkksi Ar-K ivyga RS7_CHLTR : 51- 52: alerf A--K rlgle RS7_CHLTR : 70- 71: ealen A--K pilev RS7_CHLTR : 109- 112: wiikh ArsK pgkcm RS7_CHLTR : 134- 137: fnkqg AtiK kredt RS7_CHLTR : 148- 150: hrmae An-K afahy RS7_CHLTR : 153- 156: ankaf AhyK w RS7_CRYPH : 65- 67: lvfes Ai-K kvtpl RS7_CRYPH : 65- 68: lvfes AikK vtplv RS7_CRYPH : 112- 114: yarer Ag-K smsmk RS7_CRYPH : 147- 149: hrmae An-K afahy RS7_CUSEU : 7- 9: srrgt Ae-K kkaks RS7_CUSEU : 7- 10: srrgt AekK kaksd RS7_CUSEU : 12- 13: aekkk A--K sdpiy RS7_CUSEU : 46- 48: qimyr Av-K tiqqn RS7_CUSEU : 107- 110: rwlla AsrK rpgrd RS7_CUSEU : 117- 119: pgrdm Af-K lssel RS7_CUSEU : 127- 129: selvd Aa-K grgda RS7_CUSEU : 128- 129: elvda A--K grgda RS7_CUSEU : 134- 137: kgrgd AirK keeth RS7_CUSRE : 7- 9: srrgt Ae-K ktaks RS7_CUSRE : 7- 10: srrgt AekK taksd RS7_CUSRE : 12- 13: aekkt A--K sdpiy RS7_CUSRE : 46- 48: qiiyr Av-K kiqqk RS7_CUSRE : 46- 49: qiiyr AvkK iqqkt RS7_CUSRE : 107- 110: rwlla AsrK rpgrd RS7_CUSRE : 117- 119: pgrdm Af-K lssel RS7_CUSRE : 127- 129: selvd Aa-K gsgda RS7_CUSRE : 128- 129: elvda A--K gsgda RS7_CUSRE : 134- 137: kgsgd AirK keeth RS7_CYAPA : 7- 8: srrst A--K krlil RS7_CYAPA : 7- 9: srrst Ak-K rlilp RS7_CYAPA : 46- 48: sfiye Al-K iieek RS7_CYAPA : 117- 119: lgkti Av-K lanel RS7_CYAPA : 147- 149: hrmae An-K afvhy RS7_DESMO : 124- 127: hlteg ArmK afhsp RS7_DESMO : 155- 158: dpksy AiqK keeie RS7_ECOLI : 23- 24: gsell A--K fvnil RS7_ECOLI : 106- 109: rwive AarK rgdks RS7_ECOLI : 107- 109: wivea Ar-K rgdks RS7_ECOLI : 127- 130: elsda AenK gtavk RS7_ECOLI : 133- 135: enkgt Av-K kredv RS7_ECOLI : 133- 136: enkgt AvkK redvh RS7_ECOLI : 146- 148: hrmae An-K afahy RS7_ECOLI : 167- 170: shqag AssK qpalg RS7_EIKCO : 51- 52: aleqt A--K kvqgk RS7_EIKCO : 51- 53: aleqt Ak-K vqgke RS7_EIKCO : 70- 71: eaidn A--K pivev RS7_EIKCO : 108- 111: rwvrd AarK rgeks RS7_EIKCO : 109- 111: wvrda Ar-K rgeks RS7_EIKCO : 135- 137: egrgg Am-K kreev RS7_EIKCO : 135- 138: egrgg AmkK reevh RS7_EIKCO : 148- 150: hrmae An-K afshf RS7_EPIVI : 7- 10: srrgt AeeK takpd RS7_EPIVI : 12- 13: aeekt A--K pdpiy RS7_EPIVI : 46- 48: qiiyr Al-K kiqqk RS7_EPIVI : 46- 49: qiiyr AlkK iqqkt RS7_EPIVI : 74- 76: vtpdi Av-K arrvg RS7_EPIVI : 107- 109: rwllv As-K krpgq RS7_EPIVI : 107- 110: rwllv AskK rpgqn RS7_EPIVI : 117- 119: pgqnm Af-K lssel RS7_EPIVI : 127- 129: selvd Aa-K gsgda RS7_EPIVI : 128- 129: elvda A--K gsgda RS7_EPIVI : 134- 137: kgsgd AirK keeth RS7_EUGGR : 6- 7: srrrr A--K kriis RS7_EUGGR : 6- 8: srrrr Ak-K riisq RS7_EUGGR : 22- 24: ynstl As-K vinki RS7_EUGGR : 64- 66: dilrk Ai-K naspq RS7_EUGGR : 99- 101: rgtsl Al-K fiiek RS7_EUGGR : 133- 135: nntge Av-K kkeei RS7_EUGGR : 133- 136: nntge AvkK keeih RS7_EUGGR : 146- 148: hktae An-K afsnm RS7_HAEIN : 8- 10: rrsve Ar-K ilpdp RS7_HAEIN : 23- 24: gsell A--K finvi RS7_HAEIN : 106- 109: rwive AarK rgdks RS7_HAEIN : 107- 109: wivea Ar-K rgdks RS7_HAEIN : 132- 135: sdnkg AavK kredv RS7_HAEIN : 133- 135: dnkga Av-K kredv RS7_HAEIN : 133- 136: dnkga AvkK redvh RS7_HAEIN : 146- 148: hrmae An-K afahy RS7_HALHA : 26- 29: tqeva AnaK lfgkw RS7_HALHA : 28- 29: evaan A--K lfgkw RS7_HALHA : 63- 65: tmgrh Aq-K qfkks RS7_HALHA : 89- 91: ktgan Ag-K kqqal RS7_HALHA : 89- 92: ktgan AgkK qqalk RS7_HALHA : 95- 97: gkkqq Al-K ivrda RS7_HALHA : 156- 158: rrvdq Al-K fladg RS7_HALHA : 167- 170: dgahs AsfK tptda RS7_HALMA : 21- 24: sepet AraK lfgew RS7_HALMA : 23- 24: petar A--K lfgew RS7_HALMA : 58- 60: tmgrh Ad-K qfkks RS7_HALMA : 151- 153: rrvdq Al-K flaeg RS7_HALMO : 21- 22: eeatg A--K lferw RS7_HALMO : 56- 58: tmgrh Ag-K qfqks RS7_HALMO : 149- 151: rrvdq Al-K fiaeg RS7_HALMO : 160- 163: egths AsfK sptda RS7_LEPBI : 52- 53: alevi A--K ktgqd RS7_LEPBI : 52- 54: alevi Ak-K tgqdp RS7_LEPBI : 70- 71: ealen A--K pqvev RS7_LEPBI : 129- 131: aefme Aq-K gtgsa RS7_LEPBI : 136- 138: kgtgs Ai-K kkedi RS7_LEPBI : 136- 139: kgtgs AikK kedir RS7_LEPBI : 149- 151: rkmad An-K afshy RS7_MAIZE : 7- 9: srrgt Ae-K rtaks RS7_MAIZE : 12- 13: aekrt A--K sdpif RS7_MAIZE : 46- 48: qilyr Av-K kiqqk RS7_MAIZE : 46- 49: qilyr AvkK iqqkt RS7_MAIZE : 108- 111: rwlle AsqK rpgrn RS7_MAIZE : 118- 120: pgrnm Af-K lssel RS7_MAIZE : 128- 130: selvd Aa-K gsgga RS7_MAIZE : 129- 130: elvda A--K gsgga RS7_MAIZE : 135- 138: kgsgg AirK keath RS7_MARPO : 7- 9: srksi Ae-K qvakp RS7_MARPO : 12- 13: aekqv A--K pdpiy RS7_MARPO : 46- 48: rilyk Am-K nikqk RS7_MARPO : 65- 68: fvlrq AvrK vtpnv RS7_MARPO : 107- 110: rwllg AsrK rsgqn RS7_MARPO : 117- 119: sgqnm Af-K lsyel RS7_MARPO : 134- 137: rdngi AirK keeth RS7_METVA : 62- 64: vverl An-K lmatq RS7_METVA : 151- 153: gasqg Ah-K skksi RS7_METVA : 168- 171: adelv AasK admqk RS7_METVA : 169- 171: delva As-K admqk RS7_METVA : 179- 181: mqksf Av-K kkeek RS7_METVA : 179- 182: mqksf AvkK keeke RS7_MICLU : 6- 8: prkgp Ap-K rplvv RS7_MICLU : 49- 52: galeg AraK ngars RS7_MICLU : 51- 52: legar A--K ngars RS7_MICLU : 134- 136: nglgg Av-K rredt RS7_MICLU : 147- 149: hkmae An-K afahy RS7_MYCIT : 6- 8: prkgp Ap-K RS7_MYCLE : 6- 8: prkgp Ap-K rplvk RS7_MYCLE : 49- 52: galeh ArdK tgtdp RS7_MYCLE : 132- 135: snglg AsvK rredt RS7_MYCSM : 6- 8: prkgp Ap-K rplvn RS7_MYCSM : 49- 52: galeq AreK tgtdp RS7_MYCSM : 132- 135: snglg AsvK rredt RS7_MYCTU : 6- 8: prkgp Ap-K rplv RS7_ORYSA : 7- 9: srrgt Ae-K rtaks RS7_ORYSA : 12- 13: aekrt A--K sdpif RS7_ORYSA : 46- 48: qilyr Av-K kiqqk RS7_ORYSA : 46- 49: qilyr AvkK iqqkt RS7_ORYSA : 108- 111: rwlle AsqK rpgrn RS7_ORYSA : 118- 120: pgrnm Af-K lssel RS7_ORYSA : 128- 130: selvd Aa-K gggga RS7_ORYSA : 129- 130: elvda A--K gggga RS7_ORYSA : 135- 138: kgggg AirK keath RS7_PINTH : 7- 9: srrst Ae-K ktaks RS7_PINTH : 7- 10: srrst AekK taksd RS7_PINTH : 12- 13: aekkt A--K sdpiy RS7_PINTH : 46- 48: rilyr Ai-K kiqqk RS7_PINTH : 46- 49: rilyr AikK iqqkt RS7_PINTH : 107- 110: rwllg AsrK rpgrn RS7_PINTH : 134- 137: rgngn AirK keeth RS7_RICPR : 7- 9: srrhv Ae-K riilp RS7_RICPR : 33- 35: nnimk Ag-K kavae RS7_RICPR : 33- 36: nnimk AgkK avaek RS7_RICPR : 39- 41: gkkav Ae-K ivysa RS7_RICPR : 46- 49: kivys AlnK iekkh RS7_RICPR : 107- 110: rwiin AasK rsekm RS7_RICPR : 108- 110: wiina As-K rsekm RS7_RICPR : 134- 136: nnrgv Ai-K kkedt RS7_RICPR : 134- 137: nnrgv AikK kedth RS7_RICPR : 147- 149: hkmae An-K afshf RS7_SALTY : 23- 24: gsell A--K fvnil RS7_SALTY : 106- 109: rwive AarK rgdks RS7_SALTY : 107- 109: wivea Ar-K rgdks RS7_SALTY : 127- 130: elsda AdnK gtavk RS7_SALTY : 133- 135: dnkgt Av-K kredv RS7_SALTY : 133- 136: dnkgt AvkK redvh RS7_SALTY : 146- 148: hrmae An-K afahy RS7_SOYBN : 7- 10: srrgt AeeK taksd RS7_SOYBN : 12- 13: aeekt A--K sdpiy RS7_SOYBN : 46- 48: qiiyr Am-K kiqqk RS7_SOYBN : 46- 49: qiiyr AmkK iqqkt RS7_SOYBN : 74- 76: vtpdi Av-K arrvg RS7_SOYBN : 107- 110: rwllg AsrK rpgrn RS7_SOYBN : 117- 119: pgrnm Af-K lssel RS7_SOYBN : 127- 129: selvd Aa-K gsgda RS7_SOYBN : 128- 129: elvda A--K gsgda RS7_SOYBN : 134- 137: kgsgd AirK keeth RS7_SPIMX : 46- 48: rilyt Al-K tikqk RS7_SPIMX : 107- 110: rwlls AarK rsgrs RS7_SPIMX : 108- 110: wllsa Ar-K rsgrs RS7_SPIMX : 134- 137: rqtgn AirK reeth RS7_SPIPL : 134- 137: netgs AvrK reeth RS7_SPIPL : 147- 149: hrmae An-K afahy RS7_SULAC : 92- 94: tfdii Av-K tgqnp RS7_SULAC : 180- 183: dnksv AirK keeie RS7_SULSO : 53- 54: rrfgk A--K vpive RS7_SULSO : 147- 148: hiatg A--K dssfn RS7_SULSO : 178- 180: dpksf Ai-K rkeei RS7_THECE : 2- 3: m A--K tlter RS7_THECE : 52- 53: shgrh A--K kafgk RS7_THECE : 52- 54: shgrh Ak-K afgka RS7_THECE : 55- 58: rhakk AfgK anvhi RS7_THECE : 161- 163: rrldi Al-K nialg RS7_THECE : 169- 172: nialg AsaK cyrnk RS7_THECE : 171- 172: algas A--K cyrnk RS7_THECE : 194- 197: iaaan AdpK tfays RS7_THEMA : 60- 63: wivqa AraK kgrpm RS7_THEMA : 62- 63: vqaar A--K kgrpm RS7_THEMA : 62- 64: vqaar Ak-K grpmk RS7_THEMA : 86- 88: nntgt Ai-K kkedt RS7_THEMA : 86- 89: nntgt AikK kedth RS7_THETH : 45- 47: rifyd Ac-K iiqek RS7_THETH : 127- 130: elmda AegK ggavk RS7_THETH : 133- 135: egkgg Av-K kkedv RS7_THETH : 133- 136: egkgg AvkK kedve RS7_TOBAC : 7- 9: srrgt Ae-K ktaks RS7_TOBAC : 7- 10: srrgt AekK taksd RS7_TOBAC : 12- 13: aekkt A--K sdpiy RS7_TOBAC : 46- 48: qiiyr Av-K kiqqk RS7_TOBAC : 46- 49: qiiyr AvkK iqqkt RS7_TOBAC : 107- 110: rwlla AsrK rpgrn RS7_TOBAC : 117- 119: pgrnm Af-K lssel RS7_TOBAC : 127- 129: selvd Aa-K gsgda RS7_TOBAC : 128- 129: elvda A--K gsgda RS7_TOBAC : 134- 137: kgsgd AirK keeth RT07_ACACA : 40- 41: klyns A--K slsqh RT07_ACACA : 286- 288: wlinn Ad-K rdiat RT07_MARPO : 177- 179: wmles Aa-K rrmgk RT07_MARPO : 178- 179: mlesa A--K rrmgk RT07_MARPO : 200- 203: aeile AsqK mgiar RT07_MARPO : 207- 209: qkmgi Ar-K krddl RT07_MARPO : 207- 210: qkmgi ArkK rddlh RT07_PROWI : 127- 129: evlsi Al-K nvtps RT07_PROWI : 170- 171: wvies A--K kkqqn RT07_PROWI : 170- 172: wvies Ak-K kqqns RT07_PROWI : 170- 173: wvies AkkK qqnsk RT07_PROWI : 192- 195: deiyq AylK qgkar RT07_PROWI : 199- 202: lkqgk ArqK rdelh RT07_WHEAT : 95- 98: rwilg AafK rrisy RT07_WHEAT : 96- 98: wilga Af-K rrisy RT07_WHEAT : 118- 121: aeild AyrK rgisr D 4: 7.3401 176( 48) R-x(0,2)-K Occurences: 176(48) RS5_HUMAN : 62- 63: aanaf R--K aqcpi RS5_HUMAN : 91- 94: klmtv RivK hafei RS5_HUMAN : 164- 167: reaaf RniK tiaec RS5_HUMAN : 198- 201: kdele RvaK snr RS5_PODCA : 66- 69: ryavk RfrK aqcpi RS5_PODCA : 68- 69: avkrf R--K aqcpi RS5_PODCA : 170- 173: reasf RniK siaec RS5_PODCA : 204- 207: kdele RvaK snr RS5_RAT : 62- 63: aangf R--K aqcpi RS5_RAT : 91- 94: klmtv RivK hafei RS5_RAT : 164- 167: reaaf RniK tiaec RS5_RAT : 181- 182: elina R--K gssns RS5_RAT : 198- 201: kdele RvaK snr RS5_YEAST : 80- 83: ryank RfrK aqcpi RS5_YEAST : 82- 83: ankrf R--K aqcpi RS5_YEAST : 111- 114: klkav RiiK htldi RS5_YEAST : 184- 187: reaaf RniK tiaet RS5_YEAST : 218- 221: kdele RvaK snr RS7_ANANI : 111- 114: qysrq RpgK smaik RS7_ANANI : 136- 137: tgssv R--K reetd RS7_ASTLO : 4- 5: mst R--K lqkrk RS7_ASTLO : 9- 10: rklqk R--K ilpnd RS7_ASTLO : 76- 79: psiel RtqK rkkgq RS7_ASTLO : 80- 81: lrtqk R--K kgqis RS7_ASTLO : 80- 82: lrtqk Rk-K gqisk RS7_ASTLO : 96- 99: ktkle RrnK ialkf RS7_ASTLO : 97- 99: tkler Rn-K ialkf RS7_ASTLO : 112- 115: nsakk RseK niiqk RS7_ASTLO : 170- 172: kkqkk Rl-K rkkni RS7_ASTLO : 173- 174: kkrlk R--K kniy RS7_ASTLO : 173- 175: kkrlk Rk-K niy RS7_BACST : 52- 55: diire RtgK dpmkv RS7_BACST : 110- 113: qyarl RgeK tmeer RS7_BACSU : 2- 3: p R--K gpvak RS7_CHLTR : 40- 41: kksia R--K ivyga RS7_CHLTR : 49- 52: ygale RfaK rlgle RS7_CHLTR : 110- 112: iikha Rs-K pgkcm RS7_CRYPH : 29- 32: nmltv RilK egkkh RS7_CRYPH : 111- 114: kyare RagK smsmk RS7_CRYPH : 136- 137: tgssi R--K reeih RS7_CUSEU : 29- 32: nmlvn RilK hgkks RS7_CUSEU : 45- 48: yqimy RavK tiqqn RS7_CUSEU : 109- 110: llaas R--K rpgrd RS7_CUSEU : 136- 137: rgdai R--K keeth RS7_CUSEU : 136- 138: rgdai Rk-K eethr RS7_CUSRE : 29- 32: nmlvn RilK hgkks RS7_CUSRE : 45- 48: yqiiy RavK kiqqk RS7_CUSRE : 109- 110: llaas R--K rpgrd RS7_CUSRE : 136- 137: sgdai R--K keeth RS7_CUSRE : 136- 138: sgdai Rk-K eethr RS7_CYAPA : 111- 114: sfslq RlgK tiavk RS7_DESMO : 26- 29: rhehr RfgK thvpi RS7_DESMO : 125- 127: ltega Rm-K afhsp RS7_ECOLI : 9- 10: rvigq R--K ilpdp RS7_ECOLI : 52- 55: etlaq RsgK selea RS7_ECOLI : 108- 109: iveaa R--K rgdks RS7_ECOLI : 110- 113: eaark RgdK smalr RS7_EIKCO : 110- 111: vrdaa R--K rgeks RS7_EIKCO : 112- 115: daark RgeK smdlr RS7_EPIVI : 29- 32: nmlvn RilK hgkks RS7_EPIVI : 45- 48: yqiiy RalK kiqqk RS7_EPIVI : 136- 137: sgdai R--K keeth RS7_EPIVI : 136- 138: sgdai Rk-K eethk RS7_EUGGR : 4- 7: srr RraK kriis RS7_EUGGR : 5- 7: srrr Ra-K kriis RS7_EUGGR : 5- 8: srrr RakK riisq RS7_EUGGR : 62- 63: pldil R--K aikna RS7_EUGGR : 75- 76: pqmet R--K rrigg RS7_EUGGR : 108- 111: iieka RerK grgis RS7_EUGGR : 110- 111: ekare R--K grgis RS7_HAEIN : 9- 10: rsvea R--K ilpdp RS7_HAEIN : 52- 55: etlaq RtgK eplea RS7_HAEIN : 108- 109: iveaa R--K rgdks RS7_HAEIN : 110- 113: eaark RgdK smalr RS7_HALHA : 81- 84: erlan RlmK tgana RS7_HALHA : 133- 135: reetv Rl-K yggis RS7_HALMA : 22- 24: epeta Ra-K lfgew RS7_HALMA : 128- 130: reetv Rl-K yggis RS7_HALMO : 126- 128: reetv Rl-K yggis RS7_LEPBI : 4- 7: msr RrgK veprh RS7_LEPBI : 5- 7: msrr Rg-K veprh RS7_LEPBI : 113- 116: rysrd RneK smknk RS7_LEPBI : 144- 145: kkedi R--K madan RS7_MAIZE : 10- 13: gtaek RtaK sdpif RS7_MAIZE : 29- 32: nmvvn RimK dgkks RS7_MAIZE : 45- 48: yqily RavK kiqqk RS7_MAIZE : 78- 81: igvkt RrnK kgstr RS7_MAIZE : 79- 81: gvktr Rn-K kgstr RS7_MAIZE : 79- 82: gvktr RnkK gstrk RS7_MAIZE : 86- 87: kkgst R--K vpiei RS7_MAIZE : 137- 138: sggai R--K keath RS7_MAIZE : 137- 139: sggai Rk-K eathr RS7_MARPO : 3- 4: ms R--K siaek RS7_MARPO : 29- 32: nmlvn RilK ngkks RS7_MARPO : 67- 68: lrqav R--K vtpnv RS7_MARPO : 109- 110: llgas R--K rsgqn RS7_MARPO : 136- 137: ngiai R--K keeth RS7_MARPO : 136- 138: ngiai Rk-K eethk RS7_METVA : 44- 47: phtag RnsK kmfdk RS7_METVA : 92- 94: tiven Rt-K enpiq RS7_MICLU : 2- 3: p R--K gpapk RS7_MICLU : 50- 52: alega Ra-K ngars RS7_MICLU : 111- 114: gfska RreK tmter RS7_MICLU : 112- 114: fskar Re-K tmter RS7_MYCIT : 2- 3: p R--K gpapk RS7_MYCLE : 2- 3: p R--K gpapk RS7_MYCLE : 50- 52: aleha Rd-K tgtdp RS7_MYCLE : 110- 113: gfsrq RreK tmier RS7_MYCLE : 111- 113: fsrqr Re-K tmier RS7_MYCSM : 2- 3: p R--K gpapk RS7_MYCSM : 50- 52: aleqa Re-K tgtdp RS7_MYCSM : 110- 113: nfsrq RreK tmver RS7_MYCSM : 111- 113: fsrqr Re-K tmver RS7_MYCTU : 2- 3: p R--K gpapk RS7_ORYSA : 10- 13: gtaek RtaK sdpif RS7_ORYSA : 29- 32: nmvvn RimK dgkks RS7_ORYSA : 45- 48: yqily RavK kiqqk RS7_ORYSA : 78- 81: igvkt RrnK kgstr RS7_ORYSA : 79- 81: gvktr Rn-K kgstr RS7_ORYSA : 79- 82: gvktr RnkK gstrk RS7_ORYSA : 86- 87: kkgst R--K vpiei RS7_ORYSA : 137- 138: gggai R--K keath RS7_ORYSA : 137- 139: gggai Rk-K eathr RS7_PINTH : 29- 32: nmvvn RilK ngkks RS7_PINTH : 45- 48: yrily RaiK kiqqk RS7_PINTH : 109- 110: llgas R--K rpgrn RS7_PINTH : 136- 137: ngnai R--K keeth RS7_PINTH : 136- 138: ngnai Rk-K eethr RS7_RICPR : 111- 114: naask RseK mmidk RS7_SALTY : 9- 10: rvigq R--K ilpdp RS7_SALTY : 52- 55: etlaq RsgK selea RS7_SALTY : 108- 109: iveaa R--K rgdks RS7_SALTY : 110- 113: eaark RgdK smalr RS7_SOYBN : 29- 32: nmlvn RilK hgkks RS7_SOYBN : 45- 48: yqiiy RamK kiqqk RS7_SOYBN : 109- 110: llgas R--K rpgrn RS7_SOYBN : 136- 137: sgdai R--K keeth RS7_SOYBN : 136- 138: sgdai Rk-K eethr RS7_SPIMX : 10- 13: sntvs RptK pdpiy RS7_SPIMX : 29- 32: nmlvn RilK ngkks RS7_SPIMX : 109- 110: llsaa R--K rsgrs RS7_SPIMX : 136- 137: tgnai R--K reeth RS7_SPIPL : 32- 35: vrrim RhgK ksvah RS7_SPIPL : 136- 137: tgsav R--K reeth RS7_SULAC : 51- 54: rhehr RfgK sripi RS7_SULAC : 72- 74: lmrpg Rn-K gkkml RS7_SULAC : 182- 183: ksvai R--K keeie RS7_SULAC : 182- 184: ksvai Rk-K eeier RS7_SULSO : 49- 52: rhehr RfgK akvpi RS7_SULSO : 70- 72: imrpg Rn-K gkkhl RS7_SULSO : 181- 182: sfaik R--K eeier RS7_THECE : 50- 53: phshg RhaK kafgk RS7_THECE : 113- 116: fmiie RrtK qnpiq RS7_THECE : 114- 116: miier Rt-K qnpiq RS7_THECE : 175- 177: sakcy Rn-K tsyaq RS7_THECE : 203- 204: tfays R--K eeier RS7_THEMA : 3- 5: ii Re-K tkkdp RS7_THEMA : 61- 63: ivqaa Ra-K kgrpm RS7_THEMA : 61- 64: ivqaa RakK grpmk RS7_THEMA : 66- 69: rakkg RpmK eklae RS7_THETH : 31- 34: inkim RdgK knlaa RS7_TOBAC : 29- 32: nmlvn RilK hgkks RS7_TOBAC : 45- 48: yqiiy RavK kiqqk RS7_TOBAC : 109- 110: llaas R--K rpgrn RS7_TOBAC : 136- 137: sgdai R--K keeth RS7_TOBAC : 136- 138: sgdai Rk-K eethr RT07_ACACA : 4- 6: mgi Rl-K knfkr RT07_ACACA : 4- 7: mgi RlkK nfkrf RT07_ACACA : 21- 24: sfyfk RilK skikr RT07_ACACA : 50- 53: qhsfr RrnK kgkfr RT07_ACACA : 51- 53: hsfrr Rn-K kgkfr RT07_ACACA : 51- 54: hsfrr RnkK gkfrv RT07_ACACA : 58- 60: kkgkf Rv-K klrlg RT07_ACACA : 58- 61: kkgkf RvkK lrlgk RT07_ACACA : 63- 66: rvkkl RlgK fkral RT07_ACACA : 75- 78: alfvk RlyK lgykk RT07_ACACA : 98- 100: riesi Rl-K kflvk RT07_ACACA : 98- 101: riesi RlkK flvky RT07_ACACA : 109- 111: vkyrw Rn-K qrlwk RT07_ACACA : 113- 116: wrnkq RlwK riyrr RT07_ACACA : 121- 124: kriyr RgfK rlyfr RT07_ACACA : 129- 132: krlyf RffK kksin RT07_ACACA : 167- 169: fvkys Rl-K lvlar RT07_ACACA : 174- 177: klvla RygK ifknk RT07_ACACA : 194- 197: klskd RveK lilln RT07_ACACA : 211- 213: qglts Rg-K kklsi RT07_ACACA : 211- 214: qglts RgkK klsis RT07_ACACA : 234- 235: kfkyk R--K fidcy RT07_ACACA : 313- 314: sliky R--K eyhsa RT07_ACACA : 331- 334: yirfl RflK tgf RT07_MARPO : 181- 184: saakr RmgK ksisl RT07_MARPO : 208- 209: kmgia R--K krddl RT07_MARPO : 208- 210: kmgia Rk-K rddlh RT07_PROWI : 55- 56: lvllk R--K nlken RT07_PROWI : 138- 139: psvel R--K vrrag RT07_PROWI : 200- 202: kqgka Rq-K rdelh RT07_WHEAT : 120- 121: ilday R--K rgisr RT07_WHEAT : 126- 127: krgis R--K rrenl E 5: 7.3401 195( 48) R-x(1,3)-G Occurences: 195(48) RS5_HUMAN : 81- 84: mmmhg Rnn-G kklmt RS5_HUMAN : 127- 129: redst Ri--G ragtv RS5_HUMAN : 130- 132: strig Ra--G tvrrq RS5_PODCA : 87- 90: lmmhg Rnn-G kklma RS5_PODCA : 133- 135: redst Ri--G ragtv RS5_PODCA : 136- 138: strig Ra--G tvrrq RS5_RAT : 81- 84: mmmhg Rnn-G kklmt RS5_RAT : 127- 129: redst Ri--G ragtv RS5_RAT : 130- 132: strig Ra--G tvrrq RS5_RAT : 181- 183: elina Rk--G ssnsy RS5_YEAST : 101- 104: lmmng Rnn-G kklka RS5_YEAST : 147- 149: redtt Rv--G gggaa RS5_YEAST : 147- 150: redtt Rvg-G ggaar RS5_YEAST : 147- 151: redtt RvggG gaarr RS7_ANANI : 53- 55: dliqe Rt--G ndple RS7_ANANI : 78- 81: vevra Rrv-G gatyq RS7_ANANI : 78- 82: vevra RrvgG atyqv RS7_ANANI : 79- 81: evrar Rv--G gatyq RS7_ANANI : 79- 82: evrar Rvg-G atyqv RS7_ANANI : 92- 96: vpmev RserG tamal RS7_ANANI : 109- 113: lvqys RqrpG ksmai RS7_ANANI : 111- 113: qysrq Rp--G ksmai RS7_ASTLO : 80- 83: lrtqk Rkk-G qiski RS7_BACST : 2- 4: p Rr--G pvakr RS7_BACST : 50- 54: afdii RertG kdpmk RS7_BACST : 52- 54: diire Rt--G kdpmk RS7_BACST : 77- 80: levra Rrv-G ganyq RS7_BACST : 77- 81: levra RrvgG anyqv RS7_BACST : 78- 80: evrar Rv--G ganyq RS7_BACST : 78- 81: evrar Rvg-G anyqv RS7_BACST : 95- 99: vrpdr RvslG lrwlv RS7_BACST : 108- 111: lvqya Rlr-G ektme RS7_BACSU : 2- 4: p Rk--G pvakr RS7_CHLTR : 53- 55: erfak Rl--G lenpl RS7_CHLTR : 79- 82: levrs Rrv-G gatyq RS7_CHLTR : 79- 83: levrs RrvgG atyqv RS7_CHLTR : 80- 82: evrsr Rv--G gatyq RS7_CHLTR : 80- 83: evrsr Rvg-G atyqv RS7_CHLTR : 110- 114: iikha RskpG kcmev RS7_CRYPH : 53- 55: diikq Rt--G edail RS7_CRYPH : 78- 81: vevka Rri-G gstyq RS7_CRYPH : 78- 82: vevka RrigG styqv RS7_CRYPH : 79- 81: evkar Ri--G gstyq RS7_CRYPH : 79- 82: evkar Rig-G styqv RS7_CRYPH : 92- 96: vpmev RafrG tnlal RS7_CRYPH : 109- 113: itkya ReraG ksmsm RS7_CRYPH : 111- 113: kyare Ra--G ksmsm RS7_CUSEU : 3- 5: ms Rr--G taekk RS7_CUSEU : 78- 82: ltvka RrvsG sthqv RS7_CUSEU : 79- 82: tvkar Rvs-G sthqv RS7_CUSEU : 92- 96: vpiei RstqG kalav RS7_CUSEU : 109- 113: llaas RkrpG rdmaf RS7_CUSEU : 111- 113: aasrk Rp--G rdmaf RS7_CUSRE : 3- 5: ms Rr--G taekk RS7_CUSRE : 78- 81: itvka Rrv-G gsthq RS7_CUSRE : 78- 82: itvka RrvgG sthqv RS7_CUSRE : 79- 81: tvkar Rv--G gsthq RS7_CUSRE : 79- 82: tvkar Rvg-G sthqv RS7_CUSRE : 109- 113: llaas RkrpG rdmaf RS7_CUSRE : 111- 113: aasrk Rp--G rdmaf RS7_CYAPA : 78- 81: ievka Rri-G gstyq RS7_CYAPA : 78- 82: ievka RrigG styqv RS7_CYAPA : 79- 81: evkar Ri--G gstyq RS7_CYAPA : 79- 82: evkar Rig-G styqv RS7_CYAPA : 92- 96: vpmev RvdrG itlal RS7_CYAPA : 111- 113: sfslq Rl--G ktiav RS7_DESMO : 25- 28: grheh Rrf-G kthvp RS7_DESMO : 26- 28: rhehr Rf--G kthvp RS7_DESMO : 44- 46: inkvm Rp--G rnmgk RS7_DESMO : 47- 50: vmrpg Rnm-G kkhla RS7_DESMO : 93- 97: reett RimyG gityh RS7_ECOLI : 3- 7: pr RrviG qrkil RS7_ECOLI : 4- 7: prr Rvi-G qrkil RS7_ECOLI : 52- 54: etlaq Rs--G ksele RS7_ECOLI : 77- 80: vevks Rrv-G gstyq RS7_ECOLI : 77- 81: vevks RrvgG styqv RS7_ECOLI : 78- 80: evksr Rv--G gstyq RS7_ECOLI : 78- 81: evksr Rvg-G styqv RS7_ECOLI : 108- 111: iveaa Rkr-G dksma RS7_EIKCO : 41- 45: ksvde RivyG aleqt RS7_EIKCO : 79- 82: vevks Rrv-G ganyq RS7_EIKCO : 79- 83: vevks RrvgG anyqv RS7_EIKCO : 80- 82: evksr Rv--G ganyq RS7_EIKCO : 80- 83: evksr Rvg-G anyqv RS7_EIKCO : 110- 113: vrdaa Rkr-G eksmd RS7_EIKCO : 132- 134: daaeg Rg--G amkkr RS7_EPIVI : 3- 5: ms Rr--G taeek RS7_EPIVI : 78- 81: iavka Rrv-G gsthq RS7_EPIVI : 78- 82: iavka RrvgG sthqv RS7_EPIVI : 79- 81: avkar Rv--G gsthq RS7_EPIVI : 79- 82: avkar Rvg-G sthqv RS7_EPIVI : 111- 113: vaskk Rp--G qnmaf RS7_EUGGR : 77- 80: metrk Rri-G gtiyq RS7_EUGGR : 77- 81: metrk RrigG tiyqv RS7_EUGGR : 78- 80: etrkr Ri--G gtiyq RS7_EUGGR : 78- 81: etrkr Rig-G tiyqv RS7_EUGGR : 108- 112: iieka RerkG rgist RS7_EUGGR : 110- 112: ekare Rk--G rgist RS7_EUGGR : 110- 114: ekare RkgrG istkl RS7_HAEIN : 52- 54: etlaq Rt--G keple RS7_HAEIN : 77- 80: vevks Rrv-G gstyq RS7_HAEIN : 77- 81: vevks RrvgG styqv RS7_HAEIN : 78- 80: evksr Rv--G gstyq RS7_HAEIN : 78- 81: evksr Rvg-G styqv RS7_HAEIN : 95- 99: vrpvr RnalG mrwiv RS7_HAEIN : 108- 111: iveaa Rkr-G dksma RS7_HALHA : 133- 137: reetv RlkyG gisvp RS7_HALMA : 128- 132: reetv RlkyG gisvp RS7_HALMO : 54- 57: ehtmg Rha-G kqfqk RS7_HALMO : 126- 130: reetv RlkyG gisvp RS7_LEPBI : 3- 6: ms Rrr-G kvepr RS7_LEPBI : 4- 6: msr Rr--G kvepr RS7_LEPBI : 11- 15: gkvep RhieG dpkyn RS7_LEPBI : 79- 82: vevks Rrv-G gvtlp RS7_LEPBI : 79- 83: vevks RrvgG vtlpq RS7_LEPBI : 80- 82: evksr Rv--G gvtlp RS7_LEPBI : 80- 83: evksr Rvg-G vtlpq RS7_LEPBI : 98- 102: fvrer RlalG irwli RS7_MAIZE : 3- 5: ms Rr--G taekr RS7_MAIZE : 79- 83: gvktr RnkkG strkv RS7_MAIZE : 112- 114: easqk Rp--G rnmaf RS7_MARPO : 78- 82: vtvka RridG styqv RS7_MARPO : 79- 82: tvkar Rid-G styqv RS7_MARPO : 102- 106: kalai RwllG asrkr RS7_MARPO : 109- 113: llgas RkrsG qnmaf RS7_MARPO : 111- 113: gasrk Rs--G qnmaf RS7_MARPO : 129- 132: lidaa Rdn-G iairk RS7_METVA : 116- 120: reett RisyG giafl RS7_MICLU : 2- 4: p Rk--G papkr RS7_MICLU : 40- 44: kstae RivyG alega RS7_MICLU : 50- 54: alega RaknG arsrg RS7_MICLU : 56- 59: aknga Rsr-G hpikk RS7_MICLU : 78- 81: levrs Rrv-G gatyq RS7_MICLU : 78- 82: levrs RrvgG atyqv RS7_MICLU : 79- 81: evrsr Rv--G gatyq RS7_MICLU : 79- 82: evrsr Rvg-G atyqv RS7_MICLU : 102- 106: talal RwlvG fskar RS7_MYCIT : 2- 4: p Rk--G papk RS7_MYCLE : 2- 4: p Rk--G papkr RS7_MYCLE : 40- 44: kslae RivyG aleha RS7_MYCLE : 50- 54: aleha RdktG tdpvi RS7_MYCLE : 77- 80: levrs Rrv-G gatyq RS7_MYCLE : 77- 81: levrs RrvgG atyqv RS7_MYCLE : 78- 80: evrsr Rv--G gatyq RS7_MYCLE : 78- 81: evrsr Rvg-G atyqv RS7_MYCLE : 101- 105: ttlal RwlvG fsrqr RS7_MYCSM : 2- 4: p Rk--G papkr RS7_MYCSM : 40- 44: kslae RivyG aleqa RS7_MYCSM : 50- 54: aleqa RektG tdpvv RS7_MYCSM : 77- 80: levrs Rrv-G gatyq RS7_MYCSM : 77- 81: levrs RrvgG atyqv RS7_MYCSM : 78- 80: evrsr Rv--G gatyq RS7_MYCSM : 78- 81: evrsr Rvg-G atyqv RS7_MYCTU : 2- 4: p Rk--G papkr RS7_ORYSA : 3- 5: ms Rr--G taekr RS7_ORYSA : 79- 83: gvktr RnkkG strkv RS7_ORYSA : 112- 114: easqk Rp--G rnmaf RS7_PINTH : 78- 81: vtvka Rrv-G gstyr RS7_PINTH : 78- 82: vtvka RrvgG styrv RS7_PINTH : 79- 81: tvkar Rv--G gstyr RS7_PINTH : 79- 82: tvkar Rvg-G styrv RS7_PINTH : 92- 96: vptei RstqG kvlai RS7_PINTH : 102- 106: kvlai RwllG asrkr RS7_PINTH : 109- 113: llgas RkrpG rnmnf RS7_PINTH : 111- 113: gasrk Rp--G rnmnf RS7_PINTH : 129- 132: lmdaa Rgn-G nairk RS7_RICPR : 79- 81: evtsv Rv--G ganyq RS7_RICPR : 79- 82: evtsv Rvg-G anyqv RS7_RICPR : 94- 96: thvde Rr--G yalas RS7_SALTY : 3- 7: pr RrviG qrkil RS7_SALTY : 4- 7: prr Rvi-G qrkil RS7_SALTY : 52- 54: etlaq Rs--G ksele RS7_SALTY : 77- 80: vevks Rrv-G gstyq RS7_SALTY : 77- 81: vevks RrvgG styqv RS7_SALTY : 78- 80: evksr Rv--G gstyq RS7_SALTY : 78- 81: evksr Rvg-G styqv RS7_SALTY : 108- 111: iveaa Rkr-G dksma RS7_SOYBN : 3- 5: ms Rr--G taeek RS7_SOYBN : 78- 81: iavka Rrv-G gsthq RS7_SOYBN : 78- 82: iavka RrvgG sthqv RS7_SOYBN : 79- 81: avkar Rv--G gsthq RS7_SOYBN : 79- 82: avkar Rvg-G sthqv RS7_SOYBN : 102- 106: kalai RwllG asrkr RS7_SOYBN : 109- 113: llgas RkrpG rnmaf RS7_SOYBN : 111- 113: gasrk Rp--G rnmaf RS7_SPIMX : 78- 81: vvvka Rrr-G gstyq RS7_SPIMX : 78- 82: vvvka RrrgG styqv RS7_SPIMX : 79- 81: vvkar Rr--G gstyq RS7_SPIMX : 79- 82: vvkar Rrg-G styqv RS7_SPIMX : 80- 82: vkarr Rg--G styqv RS7_SPIMX : 109- 113: llsaa RkrsG rsmgl RS7_SPIMX : 111- 113: saark Rs--G rsmgl RS7_SPIMX : 114- 117: rkrsg Rsm-G lklsy RS7_SPIMX : 129- 132: lmdaa Rqt-G nairk RS7_SPIPL : 32- 34: vrrim Rh--G kksva RS7_SPIPL : 53- 55: atiee Rt--G sdple RS7_SPIPL : 78- 81: vevka Rrv-G gatyq RS7_SPIPL : 78- 82: vevka RrvgG atyqv RS7_SPIPL : 79- 81: evkar Rv--G gatyq RS7_SPIPL : 79- 82: evkar Rvg-G atyqv RS7_SPIPL : 92- 96: vpmev RserG ttlal RS7_SPIPL : 109- 113: lihfs RtrsG rsmas RS7_SPIPL : 111- 113: hfsrt Rs--G rsmas RS7_SULAC : 50- 53: grheh Rrf-G ksrip RS7_SULAC : 51- 53: rhehr Rf--G ksrip RS7_SULAC : 69- 71: innlm Rp--G rnkgk RS7_SULAC : 72- 75: lmrpg Rnk-G kkmla RS7_SULAC : 118- 122: reevt RimyG givyy RS7_SULSO : 48- 51: grheh Rrf-G kakvp RS7_SULSO : 49- 51: rhehr Rf--G kakvp RS7_SULSO : 67- 69: inqim Rp--G rnkgk RS7_SULSO : 70- 73: imrpg Rnk-G kkhla RS7_SULSO : 116- 120: reevt RimyG givyy RS7_THECE : 73- 75: inkvm Rs--G atshk RS7_THEMA : 30- 33: levrp Rrv-G gatyq RS7_THEMA : 30- 34: levrp RrvgG atyqv RS7_THEMA : 31- 33: evrpr Rv--G gatyq RS7_THEMA : 31- 34: evrpr Rvg-G atyqv RS7_THEMA : 61- 65: ivqaa RakkG rpmke RS7_THETH : 31- 33: inkim Rd--G kknla RS7_THETH : 77- 80: mevrs Rrv-G ganyq RS7_THETH : 77- 81: mevrs RrvgG anyqv RS7_THETH : 78- 80: evrsr Rv--G ganyq RS7_THETH : 78- 81: evrsr Rvg-G anyqv RS7_TOBAC : 3- 5: ms Rr--G taekk RS7_TOBAC : 78- 81: itvka Rrv-G gsthq RS7_TOBAC : 78- 82: itvka RrvgG sthqv RS7_TOBAC : 79- 81: tvkar Rv--G gsthq RS7_TOBAC : 79- 82: tvkar Rvg-G sthqv RS7_TOBAC : 109- 113: llaas RkrpG rnmaf RS7_TOBAC : 111- 113: aasrk Rp--G rnmaf RT07_ACACA : 51- 55: hsfrr RnkkG kfrvk RT07_ACACA : 63- 65: rvkkl Rl--G kfkra RT07_ACACA : 120- 122: wkriy Rr--G fkrly RT07_ACACA : 174- 176: klvla Ry--G kifkn RT07_MARPO : 65- 68: gllps Rpr-G rrast RT07_MARPO : 84- 88: nlgyi RglnG kqkql RT07_MARPO : 148- 151: evkkv Ris-G ttrlv RT07_MARPO : 180- 183: esaak Rrm-G kksis RT07_MARPO : 181- 183: saakr Rm--G kksis RT07_PROWI : 141- 144: elrkv Rra-G ntfli RT07_PROWI : 142- 144: lrkvr Ra--G ntfli RT07_WHEAT : 19- 23: klvnf RmidG krtrv RT07_WHEAT : 90- 94: qtlai RwilG aafkr RT07_WHEAT : 120- 123: ilday Rkr-G isrkr Number of patterns evaluated by Pratt:7 Total running time: 1 seconds