------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 21 sequences from file RIBOSOMAL_S5 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 21 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_S5.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: RS2_CRIGR 202 RS2_DROME 267 RS2_RAT 293 RS4_DICDI 265 RS4_HUMAN 221 RS4_MOUSE 221 RS4_YEAST 253 RS5_ACYKS 126 RS5_BACST 166 RS5_BACSU 166 RS5_CHLTR 165 RS5_CYAPA 169 RS5_ECOLI 166 RS5_HAEIN 166 RS5_HALMA 212 RS5_METVA 225 RS5_MICLU 183 RS5_MYCCA 250 RS5_STRCO 167 RS5_THETH 43 RT05_YEAST 307 Pratt run started at Thu Feb 6 21:06:28 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 18.8503 46( 21) V-x(0,2)-G-x(3)-G-x(2)-G-x(1,3)-G 2: 15.6802 28( 21) G-x(3)-G-x(2)-G-x(1,3)-G 3: 12.5102 33( 21) A-x(4)-G-x(3)-G 4: 12.0102 42( 21) G-x(2)-G-x(0,1)-G 5: 11.5102 53( 21) V-x(0,1)-G-x(2,3)-G 6: 11.5102 35( 21) V-x(0,1)-V-x(1,2)-G 7: 11.5102 32( 21) G-x(1,2)-V-x(1,2)-G 8: 11.5102 32( 21) R-x(4,5)-A-x(1,2)-V 9: 11.5102 46( 21) G-x(1,2)-R-x(4,5)-A 10: 11.0102 66( 21) V-x(0,1)-G-x(1,3)-G 11: 11.0102 32( 21) G-x(1,2)-V-x(0,2)-G 12: 11.0102 45( 21) V-x(0,1)-V-x(0,2)-G 13: 11.0102 39( 21) A-x(0,2)-G-x(0,1)-G 14: 8.3401 96( 21) G-x-G 15: 8.3401 49( 21) G-x-V 16: 8.3401 45( 21) G-x-R 17: 8.3401 38( 21) L-x(3)-G 18: 8.3401 39( 21) F-x-A 19: 8.3401 38( 21) R-x(4)-A 20: 8.3401 54( 21) R-x(5)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 24.6861 46( 21) V-x(0,2)-G-[DN]-x(2)-G-x-[ILV]-G-x(1,3)-G B 2: 21.5160 21( 21) G-[DN]-x(2)-G-x-[ILV]-G-x(1,3)-G C 3: 19.4393 29( 21) G-x(1,2)-R-x(4,5)-A-x(4)-[GIV]-x(3)-[GQS]-x(2)-[GSV] D 4: 18.8207 27( 21) V-x(0,1)-V-x(1,2)-G-x(3)-[GNSV]-x(2)-[AG]-x-[AGIPV] E 5: 18.3207 36( 21) V-x(0,1)-V-x(0,2)-G-x(3)-[GNSV]-x(2)-[AG]-x-[AGIPV] F 6: 17.0179 27( 21) A-x(2)-[AGV]-x-G-x(3)-G-x(2)-[AGILV] G 7: 16.9851 26( 21) F-x-A-[FILV]-x-[ADNTV]-x-[AGNS]-x(3)-[CDGV] H 8: 12.9189 52( 21) V-x(0,1)-G-x(1,3)-G-x-[AGILV] I 9: 12.0102 42( 21) G-x(2)-G-x(0,1)-G J 10: 11.5102 53( 21) V-x(0,1)-G-x(2,3)-G K 11: 11.5102 32( 21) G-x(1,2)-V-x(1,2)-G L 12: 11.5102 32( 21) R-x(4,5)-A-x(1,2)-V M 13: 11.0102 32( 21) G-x(1,2)-V-x(0,2)-G N 14: 11.0102 39( 21) A-x(0,2)-G-x(0,1)-G O 15: 8.3401 96( 21) G-x-G P 16: 8.3401 49( 21) G-x-V Q 17: 8.3401 45( 21) G-x-R R 18: 8.3401 38( 21) L-x(3)-G S 19: 8.3401 38( 21) R-x(4)-A T 20: 8.3401 54( 21) R-x(5)-A Best patterns with alignements: fitness hits(seqs) Pattern A 1: 24.6861 46( 21) V-x(0,2)-G-[DN]-x(2)-G-x-[ILV]-G-x(1,3)-G Occurences: 46(21) RS2_CRIGR : 68- 80: rfkaf VaiGDynGhVGl--G vkcsk RS2_DROME : 111- 123: rfkaf VaiGDnnGhIGl--G vkcsk RS2_RAT : 128- 140: rfkaf VaiGDynGhVGl--G vkcsk RS4_DICDI : 115- 127: rfkaf VvvGDhnGhVGl--G vkcak RS4_DICDI : 116- 127: fkafv Vv-GDhnGhVGl--G vkcak RS4_DICDI : 117- 127: kafvv V--GDhnGhVGl--G vkcak RS4_HUMAN : 56- 68: rfkaf VaiGDynGhVGl--G vkcsk RS4_MOUSE : 56- 68: rfkaf VaiGDynGhVGl--G vkcsk RS4_YEAST : 101- 113: rfkav VvvGDsnGhVGl--G iktak RS4_YEAST : 102- 113: fkavv Vv-GDsnGhVGl--G iktak RS4_YEAST : 103- 113: kavvv V--GDsnGhVGl--G iktak RS5_ACYKS : 38- 49: ftalt Vv-GDgnGrVGf--G ygkar RS5_ACYKS : 38- 51: ftalt Vv-GDgnGrVGfgyG karev RS5_ACYKS : 39- 49: taltv V--GDgnGrVGf--G ygkar RS5_ACYKS : 39- 51: taltv V--GDgnGrVGfgyG karev RS5_BACST : 37- 49: rfsal VvvGDknGhVGf--G tgkaq RS5_BACST : 37- 51: rfsal VvvGDknGhVGfgtG kaqev RS5_BACST : 38- 49: fsalv Vv-GDknGhVGf--G tgkaq RS5_BACST : 38- 51: fsalv Vv-GDknGhVGfgtG kaqev RS5_BACST : 39- 49: salvv V--GDknGhVGf--G tgkaq RS5_BACST : 39- 51: salvv V--GDknGhVGfgtG kaqev RS5_BACSU : 37- 49: rfaal VvvGDknGhVGf--G tgkaq RS5_BACSU : 37- 51: rfaal VvvGDknGhVGfgtG kaqev RS5_BACSU : 38- 49: faalv Vv-GDknGhVGf--G tgkaq RS5_BACSU : 38- 51: faalv Vv-GDknGhVGfgtG kaqev RS5_BACSU : 39- 49: aalvv V--GDknGhVGf--G tgkaq RS5_BACSU : 39- 51: aalvv V--GDknGhVGfgtG kaqev RS5_CHLTR : 41- 51: salil V--GDrkGrLGf--G fakan RS5_CYAPA : 43- 55: sfrai VviGNerGqVGv--G igkas RS5_CYAPA : 43- 57: sfrai VviGNerGqVGvgiG kasdv RS5_CYAPA : 44- 55: fraiv Vi-GNerGqVGv--G igkas RS5_CYAPA : 44- 57: fraiv Vi-GNerGqVGvgiG kasdv RS5_ECOLI : 37- 48: ftalt Vv-GDgnGrVGf--G ygkar RS5_ECOLI : 37- 50: ftalt Vv-GDgnGrVGfgyG karev RS5_ECOLI : 38- 48: taltv V--GDgnGrVGf--G ygkar RS5_ECOLI : 38- 50: taltv V--GDgnGrVGfgyG karev RS5_HAEIN : 38- 49: ftalt Vv-GDgnGrVGf--G ygkar RS5_HAEIN : 38- 51: ftalt Vv-GDgnGrVGfgyG karev RS5_HAEIN : 39- 49: taltv V--GDgnGrVGf--G ygkar RS5_HAEIN : 39- 51: taltv V--GDgnGrVGfgyG karev RS5_HALMA : 74- 88: kfrcv VavGNrdGlIGyaeG rddqv RS5_HALMA : 76- 88: rcvva V--GNrdGlIGyaeG rddqv RS5_METVA : 83- 95: ryrat VvvGNknGyVGv--G mgksk RS5_METVA : 83- 97: ryrat VvvGNknGyVGvgmG kskev RS5_METVA : 84- 95: yratv Vv-GNknGyVGv--G mgksk RS5_METVA : 84- 97: yratv Vv-GNknGyVGvgmG kskev RS5_METVA : 85- 95: ratvv V--GNknGyVGv--G mgksk RS5_METVA : 85- 97: ratvv V--GNknGyVGvgmG kskev RS5_MICLU : 34- 46: sftal VvvGDgdGtVGv--G ygkak RS5_MICLU : 34- 48: sftal VvvGDgdGtVGvgyG kakev RS5_MICLU : 35- 46: ftalv Vv-GDgdGtVGv--G ygkak RS5_MICLU : 35- 48: ftalv Vv-GDgdGtVGvgyG kakev RS5_MICLU : 36- 46: talvv V--GDgdGtVGv--G ygkak RS5_MICLU : 36- 48: talvv V--GDgdGtVGvgyG kakev RS5_MYCCA : 71- 83: rfaav VvvGNkkGlVGm--G tgkan RS5_MYCCA : 71- 85: rfaav VvvGNkkGlVGmgtG kanev RS5_MYCCA : 72- 83: faavv Vv-GNkkGlVGm--G tgkan RS5_MYCCA : 72- 85: faavv Vv-GNkkGlVGmgtG kanev RS5_MYCCA : 73- 83: aavvv V--GNkkGlVGm--G tgkan RS5_MYCCA : 73- 85: aavvv V--GNkkGlVGmgtG kanev RS5_STRCO : 26- 38: sftal VvvGDgdGtVGv--G ygkak RS5_STRCO : 26- 40: sftal VvvGDgdGtVGvgyG kakev RS5_STRCO : 27- 38: ftalv Vv-GDgdGtVGv--G ygkak RS5_STRCO : 27- 40: ftalv Vv-GDgdGtVGvgyG kakev RS5_STRCO : 28- 38: talvv V--GDgdGtVGv--G ygkak RS5_STRCO : 28- 40: talvv V--GDgdGtVGvgyG kakev RS5_THETH : 31- 43: rfgal VvvGDrqGrVGl--G RS5_THETH : 32- 43: fgalv Vv-GDrqGrVGl--G RS5_THETH : 33- 43: galvv V--GDrqGrVGl--G RT05_YEAST : 170- 182: sfyal VvvGDknGmVGl--G egksr RT05_YEAST : 170- 184: sfyal VvvGDknGmVGlgeG ksree RT05_YEAST : 171- 182: fyalv Vv-GDknGmVGl--G egksr RT05_YEAST : 171- 184: fyalv Vv-GDknGmVGlgeG ksree RT05_YEAST : 172- 182: yalvv V--GDknGmVGl--G egksr RT05_YEAST : 172- 184: yalvv V--GDknGmVGlgeG ksree B 2: 21.5160 21( 21) G-[DN]-x(2)-G-x-[ILV]-G-x(1,3)-G Occurences: 21(21) RS2_CRIGR : 71- 80: afvai GDynGhVGl--G vkcsk RS2_DROME : 114- 123: afvai GDnnGhIGl--G vkcsk RS2_RAT : 131- 140: afvai GDynGhVGl--G vkcsk RS4_DICDI : 118- 127: afvvv GDhnGhVGl--G vkcak RS4_HUMAN : 59- 68: afvai GDynGhVGl--G vkcsk RS4_MOUSE : 59- 68: afvai GDynGhVGl--G vkcsk RS4_YEAST : 104- 113: avvvv GDsnGhVGl--G iktak RS5_ACYKS : 40- 49: altvv GDgnGrVGf--G ygkar RS5_ACYKS : 40- 51: altvv GDgnGrVGfgyG karev RS5_BACST : 40- 49: alvvv GDknGhVGf--G tgkaq RS5_BACST : 40- 51: alvvv GDknGhVGfgtG kaqev RS5_BACSU : 40- 49: alvvv GDknGhVGf--G tgkaq RS5_BACSU : 40- 51: alvvv GDknGhVGfgtG kaqev RS5_CHLTR : 42- 51: alilv GDrkGrLGf--G fakan RS5_CYAPA : 46- 55: aivvi GNerGqVGv--G igkas RS5_CYAPA : 46- 57: aivvi GNerGqVGvgiG kasdv RS5_ECOLI : 39- 48: altvv GDgnGrVGf--G ygkar RS5_ECOLI : 39- 50: altvv GDgnGrVGfgyG karev RS5_HAEIN : 40- 49: altvv GDgnGrVGf--G ygkar RS5_HAEIN : 40- 51: altvv GDgnGrVGfgyG karev RS5_HALMA : 77- 88: cvvav GNrdGlIGyaeG rddqv RS5_METVA : 86- 95: atvvv GNknGyVGv--G mgksk RS5_METVA : 86- 97: atvvv GNknGyVGvgmG kskev RS5_MICLU : 37- 46: alvvv GDgdGtVGv--G ygkak RS5_MICLU : 37- 48: alvvv GDgdGtVGvgyG kakev RS5_MYCCA : 74- 83: avvvv GNkkGlVGm--G tgkan RS5_MYCCA : 74- 85: avvvv GNkkGlVGmgtG kanev RS5_STRCO : 29- 38: alvvv GDgdGtVGv--G ygkak RS5_STRCO : 29- 40: alvvv GDgdGtVGvgyG kakev RS5_THETH : 34- 43: alvvv GDrqGrVGl--G RT05_YEAST : 173- 182: alvvv GDknGmVGl--G egksr RT05_YEAST : 173- 184: alvvv GDknGmVGlgeG ksree C 3: 19.4393 29( 21) G-x(1,2)-R-x(4,5)-A-x(4)-[GIV]-x(3)-[GQS]-x(2)-[GSV] Occurences: 29(21) RS2_CRIGR : 59- 78: kqtra Gq-Rtrfk-AfvaiGdynGhvG lgvkc RS2_DROME : 102- 121: kqtra Gq-Rtrfk-AfvaiGdnnGhiG lgvkc RS2_RAT : 119- 138: kqtra Gq-Rtrfk-AfvaiGdynGhvG lgvkc RS4_DICDI : 106- 125: kqtra Gq-Rtrfk-AfvvvGdhnGhvG lgvkc RS4_HUMAN : 47- 66: kqtra Gq-Rtrfk-AfvaiGdynGhvG lgvkc RS4_MOUSE : 47- 66: kqtra Gq-Rtrfk-AfvaiGdynGhvG lgvkc RS4_YEAST : 92- 111: kqtra Gq-Rtrfk-AvvvvGdsnGhvG lgikt RS5_ACYKS : 27- 47: sktvk Gg-RifsftAltvvGdgnGrvG fgygk RS5_BACST : 27- 47: akvvk GgrRlrfs-AlvvvGdknGhvG fgtgk RS5_BACST : 27- 47: akvvk Gg-RrlrfsAlvvvGdknGhvG fgtgk RS5_BACST : 28- 47: kvvkg Gr-Rlrfs-AlvvvGdknGhvG fgtgk RS5_BACST : 109- 130: gviag GpaRavlelAgisdIlskSigS ntpin RS5_BACSU : 27- 47: akvvk GgrRfrfa-AlvvvGdknGhvG fgtgk RS5_BACSU : 27- 47: akvvk Gg-RrfrfaAlvvvGdknGhvG fgtgk RS5_BACSU : 28- 47: kvvkg Gr-Rfrfa-AlvvvGdknGhvG fgtgk RS5_BACSU : 109- 130: gviag GpvRavlelAgvadIlskSlgS ntpin RS5_CHLTR : 29- 49: ckvvk Gg-RkfsfsAlilvGdrkGrlG fgfak RS5_CYAPA : 116- 137: gviag GavRtvlelAgvrnIlakQlgS nnpln RS5_ECOLI : 26- 46: sktvk Gg-RifsftAltvvGdgnGrvG fgygk RS5_HAEIN : 27- 47: sktvk Gg-RimsftAltvvGdgnGrvG fgygk RS5_HALMA : 121- 141: gswec GcgRphtv-AlrteGkagSveV elqpa RS5_METVA : 74- 93: rmhks Gr-Raryr-AtvvvGnknGyvG vgmgk RS5_MICLU : 25- 44: rvskv Gr-Rfsft-AlvvvGdgdGtvG vgygk RS5_MICLU : 106- 127: aviag GpvRavlecAgihdVlskSmgS vnain RS5_MYCCA : 61- 81: tkvtk Gg-RhfrfaAvvvvGnkkGlvG mgtgk RS5_STRCO : 16- 36: akvvk GgrRfsft-AlvvvGdgdGtvG vgygk RS5_STRCO : 16- 36: akvvk Gg-RrfsftAlvvvGdgdGtvG vgygk RS5_STRCO : 17- 36: kvvkg Gr-Rfsft-AlvvvGdgdGtvG vgygk RS5_STRCO : 98- 119: gviag GpvRavlecAgihdVlskSlgS dnqin RS5_THETH : 21- 41: armqa GgrRfrfg-AlvvvGdrqGrvG lg RS5_THETH : 21- 41: armqa Gg-RrfrfgAlvvvGdrqGrvG lg RS5_THETH : 22- 41: rmqag Gr-Rfrfg-AlvvvGdrqGrvG lg RT05_YEAST : 116- 135: slpnd Gg-Rksks-AdvaaGlhkQtgV dpdyi D 4: 18.8207 27( 21) V-x(0,1)-V-x(1,2)-G-x(3)-[GNSV]-x(2)-[AG]-x-[AGIPV] Occurences: 27(21) RS2_CRIGR : 103- 117: aklsi VpVrrGywgNkiGkP htvpc RS2_DROME : 146- 160: aklsv VpVrrGywgNkiGkP htvpc RS2_RAT : 163- 177: aklsi VpVrrGywgNkiGkP htvpc RS4_DICDI : 115- 127: rfkaf V-Vv-GdhnGhvGlG vkcak RS4_HUMAN : 91- 105: aklsi VpVrrGywgNkiGkP htvpc RS4_MOUSE : 91- 105: aklsi VpVrrGywgNkiGkP htvpc RS4_YEAST : 100- 113: trfka VvVv-GdsnGhvGlG iktak RS4_YEAST : 100- 113: trfka V-VvvGdsnGhvGlG iktak RS4_YEAST : 101- 113: rfkav V-Vv-GdsnGhvGlG iktak RS5_ACYKS : 38- 51: ftalt V-VgdGngrVgfGyG karev RS5_BACST : 37- 49: rfsal V-Vv-GdknGhvGfG tgkaq RS5_BACSU : 37- 49: rfaal V-Vv-GdknGhvGfG tgkaq RS5_CHLTR : 26- 39: nrcck V-VkgGrkfSfsAlI lvgdr RS5_CYAPA : 30- 43: rrvsk V-VkgGkklSfrAiV vigne RS5_CYAPA : 43- 55: sfrai V-Vi-GnerGqvGvG igkas RS5_ECOLI : 37- 50: ftalt V-VgdGngrVgfGyG karev RS5_HAEIN : 38- 51: ftalt V-VgdGngrVgfGyG karev RS5_HALMA : 73- 86: vkfrc V-VavGnrdGliGyA egrdd RS5_METVA : 83- 95: ryrat V-Vv-GnknGyvGvG mgksk RS5_MICLU : 34- 46: sftal V-Vv-GdgdGtvGvG ygkak RS5_MICLU : 34- 48: sftal VvVgdGdgtVgvGyG kakev RS5_MICLU : 35- 48: ftalv V-VgdGdgtVgvGyG kakev RS5_MYCCA : 70- 83: frfaa VvVv-GnkkGlvGmG tgkan RS5_MYCCA : 70- 83: frfaa V-VvvGnkkGlvGmG tgkan RS5_MYCCA : 71- 83: rfaav V-Vv-GnkkGlvGmG tgkan RS5_STRCO : 13- 26: nrvak V-VkgGrrfSftAlV vvgdg RS5_STRCO : 26- 38: sftal V-Vv-GdgdGtvGvG ygkak RS5_STRCO : 26- 40: sftal VvVgdGdgtVgvGyG kakev RS5_STRCO : 27- 40: ftalv V-VgdGdgtVgvGyG kakev RS5_THETH : 31- 43: rfgal V-Vv-GdrqGrvGlG RT05_YEAST : 170- 182: sfyal V-Vv-GdknGmvGlG egksr E 5: 18.3207 36( 21) V-x(0,1)-V-x(0,2)-G-x(3)-[GNSV]-x(2)-[AG]-x-[AGIPV] Occurences: 36(21) RS2_CRIGR : 103- 117: aklsi VpVrrGywgNkiGkP htvpc RS2_DROME : 146- 160: aklsv VpVrrGywgNkiGkP htvpc RS2_RAT : 163- 177: aklsi VpVrrGywgNkiGkP htvpc RS4_DICDI : 115- 127: rfkaf VvV--GdhnGhvGlG vkcak RS4_DICDI : 115- 127: rfkaf V-Vv-GdhnGhvGlG vkcak RS4_DICDI : 116- 127: fkafv V-V--GdhnGhvGlG vkcak RS4_HUMAN : 91- 105: aklsi VpVrrGywgNkiGkP htvpc RS4_MOUSE : 91- 105: aklsi VpVrrGywgNkiGkP htvpc RS4_YEAST : 100- 113: trfka VvVv-GdsnGhvGlG iktak RS4_YEAST : 100- 113: trfka V-VvvGdsnGhvGlG iktak RS4_YEAST : 101- 113: rfkav VvV--GdsnGhvGlG iktak RS4_YEAST : 101- 113: rfkav V-Vv-GdsnGhvGlG iktak RS4_YEAST : 102- 113: fkavv V-V--GdsnGhvGlG iktak RS5_ACYKS : 38- 49: ftalt V-V--GdgnGrvGfG ygkar RS5_ACYKS : 38- 51: ftalt V-VgdGngrVgfGyG karev RS5_BACST : 37- 49: rfsal VvV--GdknGhvGfG tgkaq RS5_BACST : 37- 49: rfsal V-Vv-GdknGhvGfG tgkaq RS5_BACST : 38- 49: fsalv V-V--GdknGhvGfG tgkaq RS5_BACSU : 37- 49: rfaal VvV--GdknGhvGfG tgkaq RS5_BACSU : 37- 49: rfaal V-Vv-GdknGhvGfG tgkaq RS5_BACSU : 38- 49: faalv V-V--GdknGhvGfG tgkaq RS5_CHLTR : 26- 39: nrcck V-VkgGrkfSfsAlI lvgdr RS5_CYAPA : 30- 43: rrvsk V-VkgGkklSfrAiV vigne RS5_CYAPA : 43- 55: sfrai V-Vi-GnerGqvGvG igkas RS5_ECOLI : 37- 48: ftalt V-V--GdgnGrvGfG ygkar RS5_ECOLI : 37- 50: ftalt V-VgdGngrVgfGyG karev RS5_HAEIN : 38- 49: ftalt V-V--GdgnGrvGfG ygkar RS5_HAEIN : 38- 51: ftalt V-VgdGngrVgfGyG karev RS5_HALMA : 73- 86: vkfrc V-VavGnrdGliGyA egrdd RS5_HALMA : 74- 86: kfrcv VaV--GnrdGliGyA egrdd RS5_METVA : 83- 95: ryrat VvV--GnknGyvGvG mgksk RS5_METVA : 83- 95: ryrat V-Vv-GnknGyvGvG mgksk RS5_METVA : 84- 95: yratv V-V--GnknGyvGvG mgksk RS5_MICLU : 34- 46: sftal VvV--GdgdGtvGvG ygkak RS5_MICLU : 34- 46: sftal V-Vv-GdgdGtvGvG ygkak RS5_MICLU : 34- 48: sftal VvVgdGdgtVgvGyG kakev RS5_MICLU : 35- 46: ftalv V-V--GdgdGtvGvG ygkak RS5_MICLU : 35- 48: ftalv V-VgdGdgtVgvGyG kakev RS5_MYCCA : 70- 83: frfaa VvVv-GnkkGlvGmG tgkan RS5_MYCCA : 70- 83: frfaa V-VvvGnkkGlvGmG tgkan RS5_MYCCA : 71- 83: rfaav VvV--GnkkGlvGmG tgkan RS5_MYCCA : 71- 83: rfaav V-Vv-GnkkGlvGmG tgkan RS5_MYCCA : 72- 83: faavv V-V--GnkkGlvGmG tgkan RS5_STRCO : 13- 26: nrvak V-VkgGrrfSftAlV vvgdg RS5_STRCO : 26- 38: sftal VvV--GdgdGtvGvG ygkak RS5_STRCO : 26- 38: sftal V-Vv-GdgdGtvGvG ygkak RS5_STRCO : 26- 40: sftal VvVgdGdgtVgvGyG kakev RS5_STRCO : 27- 38: ftalv V-V--GdgdGtvGvG ygkak RS5_STRCO : 27- 40: ftalv V-VgdGdgtVgvGyG kakev RS5_THETH : 31- 43: rfgal VvV--GdrqGrvGlG RS5_THETH : 31- 43: rfgal V-Vv-GdrqGrvGlG RS5_THETH : 32- 43: fgalv V-V--GdrqGrvGlG RT05_YEAST : 170- 182: sfyal VvV--GdknGmvGlG egksr RT05_YEAST : 170- 182: sfyal V-Vv-GdknGmvGlG egksr RT05_YEAST : 171- 182: fyalv V-V--GdknGmvGlG egksr F 6: 17.0179 27( 21) A-x(2)-[AGV]-x-G-x(3)-G-x(2)-[AGILV] Occurences: 27(21) RS2_CRIGR : 66- 78: rtrfk AfvAiGdynGhvG lgvkc RS2_DROME : 109- 121: rtrfk AfvAiGdnnGhiG lgvkc RS2_RAT : 7- 19: addag AagGpGgpgGpgL ggrgg RS2_RAT : 126- 138: rtrfk AfvAiGdynGhvG lgvkc RS4_DICDI : 113- 125: rtrfk AfvVvGdhnGhvG lgvkc RS4_HUMAN : 54- 66: rtrfk AfvAiGdynGhvG lgvkc RS4_MOUSE : 54- 66: rtrfk AfvAiGdynGhvG lgvkc RS4_YEAST : 99- 111: rtrfk AvvVvGdsnGhvG lgikt RS5_ACYKS : 35- 47: ifsft AltVvGdgnGrvG fgygk RS5_BACST : 35- 47: rlrfs AlvVvGdknGhvG fgtgk RS5_BACST : 99- 111: iilkp AseGtGviaGgpA ravle RS5_BACSU : 35- 47: rfrfa AlvVvGdknGhvG fgtgk RS5_BACSU : 99- 111: illkp AseGtGviaGgpV ravle RS5_CHLTR : 102- 114: lllkp AkpGtGivaGsrI rlile RS5_CYAPA : 41- 53: klsfr AivViGnerGqvG vgigk RS5_ECOLI : 34- 46: ifsft AltVvGdgnGrvG fgygk RS5_HAEIN : 35- 47: imsft AltVvGdgnGrvG fgygk RS5_HALMA : 146- 158: velqp AprGlGlagGetV rkvle RS5_METVA : 81- 93: raryr AtvVvGnknGyvG vgmgk RS5_METVA : 155- 167: vellp AprGvGlvaGnvA kavlg RS5_MICLU : 32- 44: rfsft AlvVvGdgdGtvG vgygk RS5_MYCCA : 69- 81: hfrfa AvvVvGnkkGlvG mgtgk RS5_MYCCA : 133- 145: ilikp AkvGtGiiaGgpA rsvie RS5_STRCO : 24- 36: rfsft AlvVvGdgdGtvG vgygk RS5_STRCO : 88- 100: vllkp AspGtGviaGgpV ravle RS5_THETH : 29- 41: rfrfg AlvVvGdrqGrvG lg RT05_YEAST : 168- 180: iasfy AlvVvGdknGmvG lgegk G 7: 16.9851 26( 21) F-x-A-[FILV]-x-[ADNTV]-x-[AGNS]-x(3)-[CDGV] Occurences: 26(21) RS2_CRIGR : 64- 75: gqrtr FkAFvAiGdynG hvglg RS2_CRIGR : 67- 78: trfka FvAIgDyNghvG lgvkc RS2_DROME : 107- 118: gqrtr FkAFvAiGdnnG higlg RS2_DROME : 110- 121: trfka FvAIgDnNghiG lgvkc RS2_RAT : 124- 135: gqrtr FkAFvAiGdynG hvglg RS2_RAT : 127- 138: trfka FvAIgDyNghvG lgvkc RS4_DICDI : 111- 122: gqrtr FkAFvVvGdhnG hvglg RS4_HUMAN : 52- 63: gqrtr FkAFvAiGdynG hvglg RS4_HUMAN : 55- 66: trfka FvAIgDyNghvG lgvkc RS4_MOUSE : 52- 63: gqrtr FkAFvAiGdynG hvglg RS4_MOUSE : 55- 66: trfka FvAIgDyNghvG lgvkc RS4_YEAST : 97- 108: gqrtr FkAVvVvGdsnG hvglg RS5_ACYKS : 33- 44: grifs FtALtVvGdgnG rvgfg RS5_BACST : 33- 44: grrlr FsALvVvGdknG hvgfg RS5_BACSU : 33- 44: grrfr FaALvVvGdknG hvgfg RS5_CHLTR : 144- 155: qvkaa FkALlTlSckdD imkrr RS5_CYAPA : 39- 50: gkkls FrAIvViGnerG qvgvg RS5_ECOLI : 32- 43: grifs FtALtVvGdgnG rvgfg RS5_HAEIN : 33- 44: grims FtALtVvGdgnG rvgfg RS5_HALMA : 189- 200: fakat FnALqNtAearV pertf RS5_METVA : 198- 209: faeat FdALnNlNfvrC lpeqk RS5_MICLU : 30- 41: grrfs FtALvVvGdgdG tvgvg RS5_MYCCA : 67- 78: grhfr FaAVvVvGnkkG lvgmg RS5_STRCO : 22- 33: grrfs FtALvVvGdgdG tvgvg RS5_THETH : 27- 38: grrfr FgALvVvGdrqG rvglg RT05_YEAST : 166- 177: gkias FyALvVvGdknG mvglg H 8: 12.9189 52( 21) V-x(0,1)-G-x(1,3)-G-x-[AGILV] Occurences: 52(21) RS2_CRIGR : 124- 131: tvpck VtGrc-GsV lvrli RS2_DROME : 167- 174: tvpck VtGkc-GsV svrli RS2_RAT : 184- 191: tvpck VtGrc-GsV lvrli RS4_DICDI : 116- 124: fkafv VvGdhnGhV glgvk RS4_DICDI : 117- 124: kafvv V-GdhnGhV glgvk RS4_DICDI : 171- 178: tvptk VtGkc-GsV avrlv RS4_HUMAN : 112- 119: tvpck VtGrc-GsV lvrli RS4_MOUSE : 112- 119: tvpck VtGrc-GsV lvrli RS4_YEAST : 102- 110: fkavv VvGdsnGhV glgik RS4_YEAST : 103- 110: kavvv V-GdsnGhV glgik RS5_ACYKS : 38- 44: ftalt VvGd--GnG rvgfg RS5_ACYKS : 38- 46: ftalt VvGdgnGrV gfgyg RS5_ACYKS : 39- 44: taltv V-Gd--GnG rvgfg RS5_ACYKS : 39- 46: taltv V-GdgnGrV gfgyg RS5_ACYKS : 46- 51: dgngr V-Gf--GyG karev RS5_ACYKS : 46- 53: dgngr V-GfgyGkA revpa RS5_BACST : 38- 46: fsalv VvGdknGhV gfgtg RS5_BACST : 39- 46: salvv V-GdknGhV gfgtg RS5_BACST : 46- 51: dkngh V-Gf--GtG kaqev RS5_BACST : 46- 53: dkngh V-GfgtGkA qevpe RS5_BACST : 85- 92: tiphe ViGhf-GaG eiilk RS5_BACSU : 38- 46: faalv VvGdknGhV gfgtg RS5_BACSU : 39- 46: aalvv V-GdknGhV gfgtg RS5_BACSU : 46- 51: dkngh V-Gf--GtG kaqev RS5_BACSU : 46- 53: dkngh V-GfgtGkA qevpe RS5_CHLTR : 41- 48: salil V-GdrkGrL gfgfa RS5_CYAPA : 44- 52: fraiv ViGnerGqV gvgig RS5_CYAPA : 52- 57: nergq V-Gv--GiG kasdv RS5_CYAPA : 52- 59: nergq V-GvgiGkA sdvin RS5_CYAPA : 54- 59: rgqvg V-Gi--GkA sdvin RS5_ECOLI : 37- 43: ftalt VvGd--GnG rvgfg RS5_ECOLI : 37- 45: ftalt VvGdgnGrV gfgyg RS5_ECOLI : 38- 43: taltv V-Gd--GnG rvgfg RS5_ECOLI : 38- 45: taltv V-GdgnGrV gfgyg RS5_ECOLI : 45- 50: dgngr V-Gf--GyG karev RS5_ECOLI : 45- 52: dgngr V-GfgyGkA revpa RS5_HAEIN : 38- 44: ftalt VvGd--GnG rvgfg RS5_HAEIN : 38- 46: ftalt VvGdgnGrV gfgyg RS5_HAEIN : 39- 44: taltv V-Gd--GnG rvgfg RS5_HAEIN : 39- 46: taltv V-GdgnGrV gfgyg RS5_HAEIN : 46- 51: dgngr V-Gf--GyG karev RS5_HAEIN : 46- 53: dgngr V-GfgyGkA revpa RS5_HALMA : 76- 83: rcvva V-GnrdGlI gyaeg RS5_METVA : 84- 92: yratv VvGnknGyV gvgmg RS5_METVA : 85- 92: ratvv V-GnknGyV gvgmg RS5_METVA : 92- 97: nkngy V-Gv--GmG kskev RS5_METVA : 159- 166: paprg V-GlvaGnV akavl RS5_MICLU : 35- 41: ftalv VvGd--GdG tvgvg RS5_MICLU : 35- 43: ftalv VvGdgdGtV gvgyg RS5_MICLU : 36- 41: talvv V-Gd--GdG tvgvg RS5_MICLU : 36- 43: talvv V-GdgdGtV gvgyg RS5_MICLU : 43- 48: dgdgt V-Gv--GyG kakev RS5_MICLU : 43- 50: dgdgt V-GvgyGkA kevpa RS5_MICLU : 45- 50: dgtvg V-Gy--GkA kevpa RS5_MYCCA : 72- 80: faavv VvGnkkGlV gmgtg RS5_MYCCA : 73- 80: aavvv V-GnkkGlV gmgtg RS5_MYCCA : 80- 85: nkkgl V-Gm--GtG kanev RS5_MYCCA : 80- 87: nkkgl V-GmgtGkA nevpe RS5_MYCCA : 135- 140: ikpak V-Gt--GiI aggpa RS5_STRCO : 27- 33: ftalv VvGd--GdG tvgvg RS5_STRCO : 27- 35: ftalv VvGdgdGtV gvgyg RS5_STRCO : 28- 33: talvv V-Gd--GdG tvgvg RS5_STRCO : 28- 35: talvv V-GdgdGtV gvgyg RS5_STRCO : 35- 40: dgdgt V-Gv--GyG kakev RS5_STRCO : 35- 42: dgdgt V-GvgyGkA kevpa RS5_STRCO : 37- 42: dgtvg V-Gy--GkA kevpa RS5_THETH : 32- 40: fgalv VvGdrqGrV glg RS5_THETH : 33- 40: galvv V-GdrqGrV glg RT05_YEAST : 171- 179: fyalv VvGdknGmV glgeg RT05_YEAST : 172- 179: yalvv V-GdknGmV glgeg RT05_YEAST : 179- 184: dkngm V-Gl--GeG ksree I 9: 12.0102 42( 21) G-x(2)-G-x(0,1)-G Occurences: 42(21) RS2_CRIGR : 75- 80: igdyn GhvGlG vkcsk RS2_DROME : 10- 14: apars GfrG-G fgsrg RS2_DROME : 16- 20: frggf GsrG-G rggrg RS2_DROME : 19- 23: gfgsr GgrG-G rgrgr RS2_DROME : 20- 25: fgsrg GrgGrG rgrgr RS2_DROME : 22- 27: srggr GgrGrG rgrwa RS2_DROME : 118- 123: igdnn GhiGlG vkcsk RS2_RAT : 6- 10: madda GaaG-G pggpg RS2_RAT : 9- 13: dagaa GgpG-G pggpg RS2_RAT : 10- 15: agaag GpgGpG gpglg RS2_RAT : 12- 16: aaggp GgpG-G pglgg RS2_RAT : 13- 18: aggpg GpgGpG lggrg RS2_RAT : 15- 20: gpggp GgpGlG grggf RS2_RAT : 18- 23: gpggp GlgGrG gfrgg RS2_RAT : 20- 24: ggpgl GgrG-G frggf RS2_RAT : 24- 28: lggrg GfrG-G fgsgl RS2_RAT : 27- 32: rggfr GgfGsG lrgrg RS2_RAT : 32- 37: ggfgs GlrGrG rgrgr RS2_RAT : 49- 53: rgrgr GarG-G kaedk RS2_RAT : 135- 140: igdyn GhvGlG vkcsk RS4_DICDI : 122- 127: vgdhn GhvGlG vkcak RS4_HUMAN : 63- 68: igdyn GhvGlG vkcsk RS4_MOUSE : 63- 68: igdyn GhvGlG vkcsk RS4_YEAST : 11- 15: qqqkr GgfG-G rnrgr RS4_YEAST : 108- 113: vgdsn GhvGlG iktak RS5_ACYKS : 44- 49: vgdgn GrvGfG ygkar RS5_BACST : 44- 49: vgdkn GhvGfG tgkaq RS5_BACST : 87- 92: phevi GhfGaG eiilk RS5_BACSU : 44- 49: vgdkn GhvGfG tgkaq RS5_BACSU : 87- 92: pheii GrfGaG nillk RS5_CHLTR : 46- 51: vgdrk GrlGfG fakan RS5_CYAPA : 50- 55: igner GqvGvG igkas RS5_ECOLI : 43- 48: vgdgn GrvGfG ygkar RS5_HAEIN : 44- 49: vgdgn GrvGfG ygkar RS5_HALMA : 151- 155: aprgl GlaG-G etvrk RS5_METVA : 90- 95: vgnkn GyvGvG mgksk RS5_MICLU : 41- 46: vgdgd GtvGvG ygkak RS5_MYCCA : 78- 83: vgnkk GlvGmG tgkan RS5_MYCCA : 121- 126: phwsl GtfGaG kilik RS5_STRCO : 33- 38: vgdgd GtvGvG ygkak RS5_THETH : 38- 43: vgdrq GrvGlG RT05_YEAST : 177- 182: vgdkn GmvGlG egksr J 10: 11.5102 53( 21) V-x(0,1)-G-x(2,3)-G Occurences: 53(21) RS2_CRIGR : 124- 129: tvpck VtGrc-G svlvr RS2_DROME : 167- 172: tvpck VtGkc-G svsvr RS2_RAT : 184- 189: tvpck VtGrc-G svlvr RS4_DICDI : 116- 122: fkafv VvGdhnG hvglg RS4_DICDI : 117- 122: kafvv V-GdhnG hvglg RS4_DICDI : 171- 176: tvptk VtGkc-G svavr RS4_HUMAN : 112- 117: tvpck VtGrc-G svlvr RS4_MOUSE : 112- 117: tvpck VtGrc-G svlvr RS4_YEAST : 102- 108: fkavv VvGdsnG hvglg RS4_YEAST : 103- 108: kavvv V-GdsnG hvglg RS5_ACYKS : 38- 44: ftalt VvGdgnG rvgfg RS5_ACYKS : 39- 44: taltv V-GdgnG rvgfg RS5_ACYKS : 46- 51: dgngr V-GfgyG karev RS5_ACYKS : 85- 91: tlqhp VkGahtG srvfm RS5_BACST : 38- 44: fsalv VvGdknG hvgfg RS5_BACST : 39- 44: salvv V-GdknG hvgfg RS5_BACST : 46- 51: dkngh V-GfgtG kaqev RS5_BACST : 85- 90: tiphe ViGhf-G ageii RS5_BACSU : 38- 44: faalv VvGdknG hvgfg RS5_BACSU : 39- 44: aalvv V-GdknG hvgfg RS5_BACSU : 46- 51: dkngh V-GfgtG kaqev RS5_CHLTR : 41- 46: salil V-GdrkG rlgfg RS5_CYAPA : 44- 50: fraiv ViGnerG qvgvg RS5_CYAPA : 52- 57: nergq V-GvgiG kasdv RS5_ECOLI : 37- 43: ftalt VvGdgnG rvgfg RS5_ECOLI : 38- 43: taltv V-GdgnG rvgfg RS5_ECOLI : 45- 50: dgngr V-GfgyG karev RS5_ECOLI : 84- 90: tlqhp VkGvhtG srvfm RS5_HAEIN : 38- 44: ftalt VvGdgnG rvgfg RS5_HAEIN : 39- 44: taltv V-GdgnG rvgfg RS5_HAEIN : 46- 51: dgngr V-GfgyG karev RS5_HAEIN : 85- 91: tlqhp VkGvhtG srvfm RS5_HALMA : 76- 81: rcvva V-GnrdG ligya RS5_METVA : 84- 90: yratv VvGnknG yvgvg RS5_METVA : 85- 90: ratvv V-GnknG yvgvg RS5_METVA : 92- 97: nkngy V-GvgmG kskev RS5_METVA : 159- 164: paprg V-GlvaG nvaka RS5_METVA : 170- 175: nvaka VlGla-G vkdaw RS5_MICLU : 35- 41: ftalv VvGdgdG tvgvg RS5_MICLU : 36- 41: talvv V-GdgdG tvgvg RS5_MICLU : 43- 48: dgdgt V-GvgyG kakev RS5_MICLU : 134- 140: naini VrGtveG lkklk RS5_MYCCA : 72- 78: faavv VvGnkkG lvgmg RS5_MYCCA : 73- 78: aavvv V-GnkkG lvgmg RS5_MYCCA : 80- 85: nkkgl V-GmgtG kanev RS5_STRCO : 27- 33: ftalv VvGdgdG tvgvg RS5_STRCO : 28- 33: talvv V-GdgdG tvgvg RS5_STRCO : 35- 40: dgdgt V-GvgyG kakev RS5_THETH : 32- 38: fgalv VvGdrqG rvglg RS5_THETH : 33- 38: galvv V-GdrqG rvglg RT05_YEAST : 171- 177: fyalv VvGdknG mvglg RT05_YEAST : 172- 177: yalvv V-GdknG mvglg RT05_YEAST : 179- 184: dkngm V-GlgeG ksree K 11: 11.5102 32( 21) G-x(1,2)-V-x(1,2)-G Occurences: 32(21) RS2_CRIGR : 75- 80: igdyn Gh-VglG vkcsk RS2_DROME : 50- 56: pvtkl GrlVreG kiksl RS2_RAT : 135- 140: igdyn Gh-VglG vkcsk RS4_DICDI : 56- 62: pvtkl GrlValG lveni RS4_DICDI : 122- 127: vgdhn Gh-VglG vkcak RS4_HUMAN : 63- 68: igdyn Gh-VglG vkcsk RS4_MOUSE : 63- 68: igdyn Gh-VglG vkcsk RS4_YEAST : 41- 47: pvtkl GrlVkaG kitti RS4_YEAST : 108- 113: vgdsn Gh-VglG iktak RS5_ACYKS : 44- 49: vgdgn Gr-VgfG ygkar RS5_BACST : 44- 49: vgdkn Gh-VgfG tgkaq RS5_BACST : 102- 108: kpase GtgViaG gpara RS5_BACSU : 44- 49: vgdkn Gh-VgfG tgkaq RS5_BACSU : 102- 108: kpase GtgViaG gpvra RS5_CHLTR : 107- 111: akpgt Gi-Va-G srirl RS5_CYAPA : 50- 55: igner Gq-VgvG igkas RS5_CYAPA : 109- 115: rpsae GtgViaG gavrt RS5_ECOLI : 43- 48: vgdgn Gr-VgfG ygkar RS5_HAEIN : 44- 49: vgdgn Gr-VgfG ygkar RS5_HALMA : 14- 20: prtrl GkqVveG eidsm RS5_METVA : 23- 29: pktqv GrmVkeG tisdi RS5_METVA : 90- 95: vgnkn Gy-VgvG mgksk RS5_METVA : 160- 164: aprgv Gl-Va-G nvaka RS5_MICLU : 41- 46: vgdgd Gt-VgvG ygkak RS5_MICLU : 99- 105: rpasp GtaViaG gpvra RS5_MICLU : 136- 140: inivr Gt-Ve-G lkklk RS5_MYCCA : 78- 83: vgnkk Gl-VgmG tgkan RS5_STRCO : 33- 38: vgdgd Gt-VgvG ygkak RS5_STRCO : 91- 97: kpasp GtgViaG gpvra RS5_THETH : 28- 34: rrfrf GalVvvG drqgr RS5_THETH : 38- 43: vgdrq Gr-VglG RT05_YEAST : 177- 182: vgdkn Gm-VglG egksr L 12: 11.5102 32( 21) R-x(4,5)-A-x(1,2)-V Occurences: 32(21) RS2_CRIGR : 61- 68: tragq Rtrfk-Af-V aigdy RS2_DROME : 104- 111: tragq Rtrfk-Af-V aigdn RS2_RAT : 121- 128: tragq Rtrfk-Af-V aigdy RS4_DICDI : 108- 115: tragq Rtrfk-Af-V vvgdh RS4_DICDI : 108- 116: tragq Rtrfk-AfvV vgdhn RS4_DICDI : 187- 196: lvpap RgtgivAarV pkkll RS4_HUMAN : 49- 56: tragq Rtrfk-Af-V aigdy RS4_MOUSE : 49- 56: tragq Rtrfk-Af-V aigdy RS4_YEAST : 94- 101: tragq Rtrfk-Av-V vvgds RS4_YEAST : 94- 102: tragq Rtrfk-AvvV vgdsn RS5_ACYKS : 29- 38: tvkgg RifsftAltV vgdgn RS5_BACST : 29- 37: vvkgg RrlrfsAl-V vvgdk RS5_BACST : 29- 38: vvkgg RrlrfsAlvV vgdkn RS5_BACST : 30- 37: vkggr Rlrfs-Al-V vvgdk RS5_BACST : 30- 38: vkggr Rlrfs-AlvV vgdkn RS5_BACSU : 29- 37: vvkgg RrfrfaAl-V vvgdk RS5_BACSU : 29- 37: vvkgg Rrfrf-AalV vvgdk RS5_BACSU : 29- 38: vvkgg RrfrfaAlvV vgdkn RS5_BACSU : 30- 37: vkggr Rfrfa-Al-V vvgdk RS5_BACSU : 30- 38: vkggr Rfrfa-AlvV vgdkn RS5_BACSU : 112- 120: aggpv RavlelAg-V adils RS5_CHLTR : 115- 123: agsri RlilemAg-V kdiva RS5_CYAPA : 119- 127: aggav RtvlelAg-V rnila RS5_ECOLI : 28- 37: tvkgg RifsftAltV vgdgn RS5_ECOLI : 111- 119: aggam RavlevAg-V hnvla RS5_HAEIN : 29- 38: tvkgg RimsftAltV vgdgn RS5_HAEIN : 112- 120: aggam RavlevAg-V rnvls RS5_HALMA : 131- 139: htval Rtegk-AgsV evelq RS5_METVA : 75- 83: mhksg RraryrAt-V vvgnk RS5_METVA : 75- 84: mhksg RraryrAtvV vgnkn RS5_METVA : 76- 83: hksgr Raryr-At-V vvgnk RS5_METVA : 76- 84: hksgr Raryr-AtvV vgnkn RS5_METVA : 157- 166: llpap RgvglvAgnV akavl RS5_MICLU : 26- 34: vskvg RrfsftAl-V vvgdg RS5_MICLU : 26- 35: vskvg RrfsftAlvV vgdgd RS5_MICLU : 27- 34: skvgr Rfsft-Al-V vvgdg RS5_MICLU : 27- 35: skvgr Rfsft-AlvV vgdgd RS5_MYCCA : 63- 70: vtkgg Rhfrf-Aa-V vvvgn RS5_MYCCA : 63- 71: vtkgg RhfrfaAv-V vvgnk RS5_MYCCA : 63- 71: vtkgg Rhfrf-AavV vvgnk RS5_MYCCA : 63- 72: vtkgg RhfrfaAvvV vgnkk RS5_STRCO : 18- 26: vvkgg RrfsftAl-V vvgdg RS5_STRCO : 18- 27: vvkgg RrfsftAlvV vgdgd RS5_STRCO : 19- 26: vkggr Rfsft-Al-V vvgdg RS5_STRCO : 19- 27: vkggr Rfsft-AlvV vgdgd RS5_THETH : 23- 31: mqagg RrfrfgAl-V vvgdr RS5_THETH : 23- 32: mqagg RrfrfgAlvV vgdrq RS5_THETH : 24- 31: qaggr Rfrfg-Al-V vvgdr RS5_THETH : 24- 32: qaggr Rfrfg-AlvV vgdrq RT05_YEAST : 118- 125: pndgg Rksks-Ad-V aaglh M 13: 11.0102 32( 21) G-x(1,2)-V-x(0,2)-G Occurences: 32(21) RS2_CRIGR : 75- 78: igdyn Gh-V--G lgvkc RS2_CRIGR : 75- 80: igdyn Gh-VglG vkcsk RS2_DROME : 50- 56: pvtkl GrlVreG kiksl RS2_RAT : 135- 138: igdyn Gh-V--G lgvkc RS2_RAT : 135- 140: igdyn Gh-VglG vkcsk RS4_DICDI : 56- 62: pvtkl GrlValG lveni RS4_DICDI : 122- 125: vgdhn Gh-V--G lgvkc RS4_DICDI : 122- 127: vgdhn Gh-VglG vkcak RS4_HUMAN : 63- 66: igdyn Gh-V--G lgvkc RS4_HUMAN : 63- 68: igdyn Gh-VglG vkcsk RS4_MOUSE : 63- 66: igdyn Gh-V--G lgvkc RS4_MOUSE : 63- 68: igdyn Gh-VglG vkcsk RS4_YEAST : 41- 47: pvtkl GrlVkaG kitti RS4_YEAST : 108- 111: vgdsn Gh-V--G lgikt RS4_YEAST : 108- 113: vgdsn Gh-VglG iktak RS5_ACYKS : 44- 47: vgdgn Gr-V--G fgygk RS5_ACYKS : 44- 49: vgdgn Gr-VgfG ygkar RS5_BACST : 44- 47: vgdkn Gh-V--G fgtgk RS5_BACST : 44- 49: vgdkn Gh-VgfG tgkaq RS5_BACST : 102- 108: kpase GtgViaG gpara RS5_BACSU : 44- 47: vgdkn Gh-V--G fgtgk RS5_BACSU : 44- 49: vgdkn Gh-VgfG tgkaq RS5_BACSU : 102- 108: kpase GtgViaG gpvra RS5_CHLTR : 107- 111: akpgt Gi-Va-G srirl RS5_CYAPA : 50- 53: igner Gq-V--G vgigk RS5_CYAPA : 50- 55: igner Gq-VgvG igkas RS5_CYAPA : 109- 115: rpsae GtgViaG gavrt RS5_ECOLI : 43- 46: vgdgn Gr-V--G fgygk RS5_ECOLI : 43- 48: vgdgn Gr-VgfG ygkar RS5_HAEIN : 44- 47: vgdgn Gr-V--G fgygk RS5_HAEIN : 44- 49: vgdgn Gr-VgfG ygkar RS5_HALMA : 14- 20: prtrl GkqVveG eidsm RS5_METVA : 23- 29: pktqv GrmVkeG tisdi RS5_METVA : 90- 93: vgnkn Gy-V--G vgmgk RS5_METVA : 90- 95: vgnkn Gy-VgvG mgksk RS5_METVA : 160- 164: aprgv Gl-Va-G nvaka RS5_MICLU : 41- 44: vgdgd Gt-V--G vgygk RS5_MICLU : 41- 46: vgdgd Gt-VgvG ygkak RS5_MICLU : 99- 105: rpasp GtaViaG gpvra RS5_MICLU : 136- 140: inivr Gt-Ve-G lkklk RS5_MYCCA : 78- 81: vgnkk Gl-V--G mgtgk RS5_MYCCA : 78- 83: vgnkk Gl-VgmG tgkan RS5_STRCO : 33- 36: vgdgd Gt-V--G vgygk RS5_STRCO : 33- 38: vgdgd Gt-VgvG ygkak RS5_STRCO : 91- 97: kpasp GtgViaG gpvra RS5_THETH : 28- 34: rrfrf GalVvvG drqgr RS5_THETH : 38- 41: vgdrq Gr-V--G lg RS5_THETH : 38- 43: vgdrq Gr-VglG RT05_YEAST : 177- 180: vgdkn Gm-V--G lgegk RT05_YEAST : 177- 182: vgdkn Gm-VglG egksr N 14: 11.0102 39( 21) A-x(0,2)-G-x(0,1)-G Occurences: 39(21) RS2_CRIGR : 138- 143: vrlip AprGtG ivsap RS2_DROME : 32- 36: grgrw Ar-GrG kedsk RS2_DROME : 181- 186: vrlip AprGtG ivsap RS2_RAT : 7- 10: addag Aa-G-G pggpg RS2_RAT : 7- 12: addag AagGpG gpggp RS2_RAT : 8- 10: ddaga A--G-G pggpg RS2_RAT : 8- 12: ddaga Ag-GpG gpggp RS2_RAT : 50- 53: grgrg Ar-G-G kaedk RS2_RAT : 198- 203: vrlip AprGtG ivsap RS4_DICDI : 17- 21: qkptr Af-GaG rpqrg RS4_DICDI : 27- 29: rpqrg A--G-G apqrg RS4_DICDI : 185- 190: vrlvp AprGtG ivaar RS4_HUMAN : 126- 131: vrlip AprGtG ivsap RS4_MOUSE : 126- 131: vrlip AprGtG ivsap RS4_YEAST : 171- 176: vrlip AprGsG ivasp RS5_ACYKS : 99- 104: vfmqp AseGtG iiagg RS5_ACYKS : 107- 109: gtgii A--G-G ammva RS5_BACST : 99- 104: iilkp AseGtG viagg RS5_BACST : 107- 109: gtgvi A--G-G parav RS5_BACSU : 99- 104: illkp AseGtG viagg RS5_BACSU : 107- 109: gtgvi A--G-G pvrav RS5_CHLTR : 102- 107: lllkp AkpGtG ivags RS5_CYAPA : 107- 111: imrps Ae-GtG viagg RS5_CYAPA : 114- 116: gtgvi A--G-G avrtv RS5_ECOLI : 98- 103: vfmqp AseGtG iiagg RS5_ECOLI : 106- 108: gtgii A--G-G amrav RS5_HAEIN : 99- 104: vfmqp AseGtG iiagg RS5_HAEIN : 107- 109: gtgii A--G-G amrav RS5_HALMA : 146- 151: velqp AprGlG lagge RS5_HALMA : 153- 155: rglgl A--G-G etvrk RS5_METVA : 155- 160: vellp AprGvG lvagn RS5_MICLU : 104- 106: gtavi A--G-G pvrav RS5_MYCCA : 133- 138: ilikp AkvGtG iiagg RS5_MYCCA : 141- 143: gtgii A--G-G parsv RS5_STRCO : 88- 93: vllkp AspGtG viagg RS5_STRCO : 96- 98: gtgvi A--G-G pvrav RS5_STRCO : 161- 166: aallr AraGaG a RS5_STRCO : 163- 166: llrar A--GaG a RS5_THETH : 20- 22: tarmq A--G-G rrfrf RT05_YEAST : 234- 239: lhlrs AkpGfG lrvnh RT05_YEAST : 290- 294: tldev Al-GrG kklvd O 15: 8.3401 96( 21) G-x-G Occurences: 96(21) RS2_CRIGR : 78- 80: ynghv GlG vkcsk RS2_CRIGR : 141- 143: ipapr GtG ivsap RS2_DROME : 14- 16: sgfrg GfG srggr RS2_DROME : 20- 22: fgsrg GrG grgrg RS2_DROME : 23- 25: rggrg GrG rgrgr RS2_DROME : 25- 27: grggr GrG rgrwa RS2_DROME : 27- 29: ggrgr GrG rwarg RS2_DROME : 34- 36: grwar GrG kedsk RS2_DROME : 121- 123: nnghi GlG vkcsk RS2_DROME : 184- 186: ipapr GtG ivsap RS2_RAT : 10- 12: agaag GpG gpggp RS2_RAT : 13- 15: aggpg GpG gpglg RS2_RAT : 16- 18: pggpg GpG lggrg RS2_RAT : 18- 20: gpggp GlG grggf RS2_RAT : 21- 23: gpglg GrG gfrgg RS2_RAT : 28- 30: ggfrg GfG sglrg RS2_RAT : 30- 32: frggf GsG lrgrg RS2_RAT : 35- 37: gsglr GrG rgrgr RS2_RAT : 37- 39: glrgr GrG rgrgr RS2_RAT : 39- 41: rgrgr GrG rgrgr RS2_RAT : 41- 43: rgrgr GrG rgrgr RS2_RAT : 43- 45: rgrgr GrG rgrga RS2_RAT : 45- 47: rgrgr GrG rgarg RS2_RAT : 47- 49: rgrgr GrG arggk RS2_RAT : 138- 140: ynghv GlG vkcsk RS2_RAT : 201- 203: ipapr GtG ivsap RS4_DICDI : 19- 21: ptraf GaG rpqrg RS4_DICDI : 26- 28: grpqr GaG gapqr RS4_DICDI : 42- 44: rpqrg GqG etksw RS4_DICDI : 125- 127: hnghv GlG vkcak RS4_DICDI : 188- 190: vpapr GtG ivaar RS4_HUMAN : 66- 68: ynghv GlG vkcsk RS4_HUMAN : 129- 131: ipapr GtG ivsap RS4_MOUSE : 66- 68: ynghv GlG vkcsk RS4_MOUSE : 129- 131: ipapr GtG ivsap RS4_YEAST : 12- 14: qqkrg GfG grnrg RS4_YEAST : 111- 113: snghv GlG iktak RS4_YEAST : 174- 176: ipapr GsG ivasp RS5_ACYKS : 40- 42: altvv GdG ngrvg RS5_ACYKS : 42- 44: tvvgd GnG rvgfg RS5_ACYKS : 47- 49: gngrv GfG ygkar RS5_ACYKS : 49- 51: grvgf GyG karev RS5_ACYKS : 102- 104: qpase GtG iiagg RS5_BACST : 47- 49: knghv GfG tgkaq RS5_BACST : 49- 51: ghvgf GtG kaqev RS5_BACST : 90- 92: vighf GaG eiilk RS5_BACST : 102- 104: kpase GtG viagg RS5_BACSU : 47- 49: knghv GfG tgkaq RS5_BACSU : 49- 51: ghvgf GtG kaqev RS5_BACSU : 90- 92: iigrf GaG nillk RS5_BACSU : 102- 104: kpase GtG viagg RS5_CHLTR : 49- 51: rkgrl GfG fakan RS5_CHLTR : 105- 107: kpakp GtG ivags RS5_CYAPA : 53- 55: ergqv GvG igkas RS5_CYAPA : 55- 57: gqvgv GiG kasdv RS5_CYAPA : 94- 96: phpid GiG gaarv RS5_CYAPA : 109- 111: rpsae GtG viagg RS5_ECOLI : 39- 41: altvv GdG ngrvg RS5_ECOLI : 41- 43: tvvgd GnG rvgfg RS5_ECOLI : 46- 48: gngrv GfG ygkar RS5_ECOLI : 48- 50: grvgf GyG karev RS5_ECOLI : 101- 103: qpase GtG iiagg RS5_HAEIN : 40- 42: altvv GdG ngrvg RS5_HAEIN : 42- 44: tvvgd GnG rvgfg RS5_HAEIN : 47- 49: gngrv GfG ygkar RS5_HAEIN : 49- 51: grvgf GyG karev RS5_HAEIN : 102- 104: qpase GtG iiagg RS5_HALMA : 114- 116: idvsr GcG swecg RS5_HALMA : 121- 123: gswec GcG rphtv RS5_HALMA : 149- 151: qpapr GlG lagge RS5_METVA : 93- 95: kngyv GvG mgksk RS5_METVA : 95- 97: gyvgv GmG kskev RS5_METVA : 123- 125: ikvrv GcG swecg RS5_METVA : 130- 132: gswec GcG sphsi RS5_METVA : 158- 160: lpapr GvG lvagn RS5_MICLU : 37- 39: alvvv GdG dgtvg RS5_MICLU : 39- 41: vvvgd GdG tvgvg RS5_MICLU : 44- 46: gdgtv GvG ygkak RS5_MICLU : 46- 48: gtvgv GyG kakev RS5_MYCCA : 81- 83: kkglv GmG tgkan RS5_MYCCA : 83- 85: glvgm GtG kanev RS5_MYCCA : 124- 126: slgtf GaG kilik RS5_MYCCA : 136- 138: kpakv GtG iiagg RS5_STRCO : 29- 31: alvvv GdG dgtvg RS5_STRCO : 31- 33: vvvgd GdG tvgvg RS5_STRCO : 36- 38: gdgtv GvG ygkak RS5_STRCO : 38- 40: gtvgv GyG kakev RS5_STRCO : 91- 93: kpasp GtG viagg RS5_STRCO : 164- 166: lrara GaG a RS5_THETH : 41- 43: rqgrv GlG RT05_YEAST : 101- 103: qqplp GeG nilpp RT05_YEAST : 159- 161: vsnqt GkG kiasf RT05_YEAST : 180- 182: kngmv GlG egksr RT05_YEAST : 182- 184: gmvgl GeG ksree RT05_YEAST : 237- 239: rsakp GfG lrvnh RT05_YEAST : 292- 294: deval GrG kklvd P 16: 8.3401 49( 21) G-x-V Occurences: 49(21) RS2_CRIGR : 75- 77: igdyn GhV glgvk RS2_CRIGR : 129- 131: vtgrc GsV lvrli RS2_CRIGR : 143- 145: aprgt GiV sapvp RS2_DROME : 172- 174: vtgkc GsV svrli RS2_DROME : 186- 188: aprgt GiV sapvp RS2_RAT : 135- 137: igdyn GhV glgvk RS2_RAT : 189- 191: vtgrc GsV lvrli RS2_RAT : 203- 205: aprgt GiV sapvp RS4_DICDI : 62- 64: rlval GlV enihe RS4_DICDI : 122- 124: vgdhn GhV glgvk RS4_DICDI : 176- 178: vtgkc GsV avrlv RS4_DICDI : 190- 192: aprgt GiV aarvp RS4_HUMAN : 63- 65: igdyn GhV glgvk RS4_HUMAN : 117- 119: vtgrc GsV lvrli RS4_HUMAN : 131- 133: aprgt GiV sapvp RS4_MOUSE : 63- 65: igdyn GhV glgvk RS4_MOUSE : 117- 119: vtgrc GsV lvrli RS4_MOUSE : 131- 133: aprgt GiV sapvp RS4_YEAST : 33- 35: nteek GwV pvtkl RS4_YEAST : 108- 110: vgdsn GhV glgik RS4_YEAST : 162- 164: ttgkc GsV tvrli RS4_YEAST : 176- 178: aprgs GiV aspav RS5_ACYKS : 44- 46: vgdgn GrV gfgyg RS5_BACST : 44- 46: vgdkn GhV gfgtg RS5_BACSU : 44- 46: vgdkn GhV gfgtg RS5_BACSU : 109- 111: gviag GpV ravle RS5_CHLTR : 107- 109: akpgt GiV agsri RS5_CYAPA : 50- 52: igner GqV gvgig RS5_CYAPA : 116- 118: gviag GaV rtvle RS5_ECOLI : 43- 45: vgdgn GrV gfgyg RS5_HAEIN : 44- 46: vgdgn GrV gfgyg RS5_HALMA : 137- 139: tegka GsV evelq RS5_METVA : 90- 92: vgnkn GyV gvgmg RS5_METVA : 146- 148: akgtc GsV kvell RS5_METVA : 160- 162: aprgv GlV agnva RS5_METVA : 164- 166: vglva GnV akavl RS5_METVA : 222- 224: lglte GrV l RS5_MICLU : 41- 43: vgdgd GtV gvgyg RS5_MICLU : 89- 91: gedaa GvV llrpa RS5_MICLU : 106- 108: aviag GpV ravle RS5_MICLU : 126- 128: lsksm GsV naini RS5_MICLU : 136- 138: inivr GtV eglkk RS5_MYCCA : 78- 80: vgnkk GlV gmgtg RS5_STRCO : 33- 35: vgdgd GtV gvgyg RS5_STRCO : 81- 83: gekaa GvV llkpa RS5_STRCO : 98- 100: gviag GpV ravle RS5_THETH : 38- 40: vgdrq GrV glg RT05_YEAST : 177- 179: vgdkn GmV glgeg RT05_YEAST : 260- 262: ikdls GkV yksrn Q 17: 8.3401 45( 21) G-x-R Occurences: 45(21) RS2_CRIGR : 59- 61: kqtra GqR trfka RS2_DROME : 10- 12: apars GfR ggfgs RS2_DROME : 16- 18: frggf GsR ggrgg RS2_DROME : 19- 21: gfgsr GgR ggrgr RS2_DROME : 22- 24: srggr GgR grgrg RS2_DROME : 102- 104: kqtra GqR trfka RS2_RAT : 20- 22: ggpgl GgR ggfrg RS2_RAT : 24- 26: lggrg GfR ggfgs RS2_RAT : 32- 34: ggfgs GlR grgrg RS2_RAT : 49- 51: rgrgr GaR ggkae RS2_RAT : 119- 121: kqtra GqR trfka RS4_DICDI : 35- 37: apqrg GpR pqrgg RS4_DICDI : 106- 108: kqtra GqR trfka RS4_HUMAN : 47- 49: kqtra GqR trfka RS4_MOUSE : 47- 49: kqtra GqR trfka RS4_YEAST : 14- 16: krggf GgR nrgrp RS4_YEAST : 25- 27: rpnrr GpR nteek RS4_YEAST : 92- 94: kqtra GqR trfka RS5_ACYKS : 27- 29: sktvk GgR ifsft RS5_ACYKS : 91- 93: kgaht GsR vfmqp RS5_BACST : 27- 29: akvvk GgR rlrfs RS5_BACST : 28- 30: kvvkg GrR lrfsa RS5_BACSU : 27- 29: akvvk GgR rfrfa RS5_BACSU : 28- 30: kvvkg GrR frfaa RS5_CHLTR : 29- 31: ckvvk GgR kfsfs RS5_CHLTR : 42- 44: alilv GdR kgrlg RS5_CHLTR : 111- 113: tgiva GsR irlil RS5_CYAPA : 126- 128: vlela GvR nilak RS5_ECOLI : 26- 28: sktvk GgR ifsft RS5_ECOLI : 90- 92: kgvht GsR vfmqp RS5_HAEIN : 27- 29: sktvk GgR imsft RS5_HAEIN : 91- 93: kgvht GsR vfmqp RS5_HAEIN : 119- 121: vleva GvR nvlsk RS5_HALMA : 65- 67: rmtds GrR vkfrc RS5_HALMA : 77- 79: cvvav GnR dglig RS5_METVA : 74- 76: rmhks GrR aryra RS5_MICLU : 25- 27: rvskv GrR fsfta RS5_MYCCA : 61- 63: tkvtk GgR hfrfa RS5_STRCO : 16- 18: akvvk GgR rfsft RS5_STRCO : 17- 19: kvvkg GrR fsfta RS5_THETH : 21- 23: armqa GgR rfrfg RS5_THETH : 22- 24: rmqag GrR frfga RS5_THETH : 34- 36: alvvv GdR qgrvg RT05_YEAST : 116- 118: slpnd GgR ksksa RT05_YEAST : 239- 241: akpgf GlR vnhvi R 18: 8.3401 38( 21) L-x(3)-G Occurences: 38(21) RS2_CRIGR : 154- 158: vpkkl LmmaG iddcy RS2_DROME : 52- 56: tklgr LvreG kiksl RS2_DROME : 197- 201: vpkkl LtmaG iedcy RS2_RAT : 19- 23: pggpg LggrG gfrgg RS2_RAT : 33- 37: gfgsg LrgrG rgrgr RS2_RAT : 214- 218: vpkkl LmmaG iddcy RS4_DICDI : 58- 62: tklgr LvalG lveni RS4_DICDI : 201- 205: vpkkl LqyaG vddvy RS4_HUMAN : 142- 146: vpkkl LmmaG iddcy RS4_MOUSE : 142- 146: vpkkl LmmaG iddcy RS4_YEAST : 43- 47: tklgr LvkaG kitti RS4_YEAST : 187- 191: avkkl LqlaG vedvy RS5_ACYKS : 36- 40: fsfta LtvvG dgngr RS5_BACST : 36- 40: lrfsa LvvvG dkngh RS5_BACST : 115- 119: parav LelaG isdil RS5_BACSU : 36- 40: frfaa LvvvG dkngh RS5_BACSU : 115- 119: pvrav LelaG vadil RS5_CHLTR : 38- 42: fsfsa LilvG drkgr RS5_CHLTR : 118- 122: rirli LemaG vkdiv RS5_CYAPA : 122- 126: avrtv LelaG vrnil RS5_ECOLI : 35- 39: fsfta LtvvG dgngr RS5_ECOLI : 114- 118: amrav LevaG vhnvl RS5_HAEIN : 36- 40: msfta LtvvG dgngr RS5_HAEIN : 115- 119: amrav LevaG vrnvl RS5_HALMA : 130- 134: phtva LrteG kagsv RS5_HALMA : 150- 154: paprg LglaG getvr RS5_HALMA : 162- 166: tvrkv LelaG iediw RS5_METVA : 171- 175: vakav LglaG vkdaw RS5_MICLU : 33- 37: fsfta LvvvG dgdgt RS5_MICLU : 112- 116: pvrav LecaG ihdvl RS5_MYCCA : 79- 83: gnkkg LvgmG tgkan RS5_MYCCA : 120- 124: vphws LgtfG agkil RS5_STRCO : 25- 29: fsfta LvvvG dgdgt RS5_STRCO : 104- 108: pvrav LecaG ihdvl RS5_THETH : 30- 34: frfga LvvvG drqgr RT05_YEAST : 99- 103: qvqqp LpgeG nilpp RT05_YEAST : 112- 116: ppgvs LpndG grksk RT05_YEAST : 169- 173: asfya LvvvG dkngm S 19: 8.3401 38( 21) R-x(4)-A Occurences: 38(21) RS2_CRIGR : 61- 66: tragq RtrfkA fvaig RS2_DROME : 104- 109: tragq RtrfkA fvaig RS2_DROME : 262- 267: skptp RlhadA RS2_RAT : 121- 126: tragq RtrfkA fvaig RS2_RAT : 284- 289: rvsvq RtqapA vatt RS4_DICDI : 22- 27: afgag RpqrgA ggapq RS4_DICDI : 25- 30: agrpq RgaggA pqrgg RS4_DICDI : 108- 113: tragq RtrfkA fvvvg RS4_HUMAN : 49- 54: tragq RtrfkA fvaig RS4_HUMAN : 212- 217: rvsvq RtqapA vatt RS4_MOUSE : 49- 54: tragq RtrfkA fvaig RS4_MOUSE : 212- 217: rvsvq RtqapA vatt RS4_YEAST : 94- 99: tragq RtrfkA vvvvg RS5_ACYKS : 54- 59: gygka RevpaA iqkam RS5_BACST : 30- 35: vkggr RlrfsA lvvvg RS5_BACST : 149- 154: lkqlk RaedvA klrgk RS5_BACSU : 29- 34: vvkgg RrfrfA alvvv RS5_BACSU : 30- 35: vkggr RfrfaA lvvvg RS5_BACSU : 149- 154: lselk RaedvA klrgk RS5_CHLTR : 63- 68: ltdai RkggdA arknl RS5_CYAPA : 145- 150: plnna RaamnA lsrlk RS5_ECOLI : 53- 58: gygka RevpaA iqkam RS5_HAEIN : 54- 59: gygka RevpaA iqkam RS5_HAEIN : 138- 143: pinvv RatidA lanmk RS5_HALMA : 124- 129: ecgcg RphtvA lrteg RS5_HALMA : 131- 136: htval RtegkA gsvev RS5_HALMA : 148- 153: lqpap RglglA ggetv RS5_METVA : 76- 81: hksgr RaryrA tvvvg RS5_MICLU : 27- 32: skvgr RfsftA lvvvg RS5_MICLU : 174- 179: tmend RaqksA kaga RS5_MYCCA : 63- 68: vtkgg RhfrfA avvvv RS5_STRCO : 19- 24: vkggr RfsftA lvvvg RS5_STRCO : 138- 143: lkglq RpeeiA arrgl RS5_STRCO : 160- 165: paall RaragA ga RS5_STRCO : 162- 167: allra RagagA RS5_THETH : 24- 29: qaggr RfrfgA lvvvg RT05_YEAST : 50- 55: kfrvs RnvefA ppyld RT05_YEAST : 118- 123: pndgg RksksA dvaag T 20: 8.3401 54( 21) R-x(5)-A Occurences: 54(21) RS2_CRIGR : 63- 69: agqrt RfkafvA igdyn RS2_CRIGR : 92- 98: vatai RgaiilA klsiv RS2_DROME : 26- 32: rggrg RgrgrwA rgrgk RS2_DROME : 106- 112: agqrt RfkafvA igdnn RS2_DROME : 135- 141: vatai RgaiilA klsvv RS2_RAT : 44- 50: grgrg RgrgrgA rggka RS2_RAT : 123- 129: agqrt RfkafvA igdyn RS2_RAT : 152- 158: vatai RgaiilA klsiv RS4_DICDI : 187- 193: lvpap RgtgivA arvpk RS4_HUMAN : 51- 57: agqrt RfkafvA igdyn RS4_HUMAN : 80- 86: vatai RgaiilA klsiv RS4_MOUSE : 51- 57: agqrt RfkafvA igdyn RS4_MOUSE : 80- 86: vatai RgaiilA klsiv RS4_YEAST : 125- 131: vagai RagiiiA klsvi RS4_YEAST : 173- 179: lipap RgsgivA spavk RS5_ACYKS : 29- 35: tvkgg RifsftA ltvvg RS5_ACYKS : 69- 75: mekar RnmmnvA lnsgt RS5_ACYKS : 93- 99: ahtgs RvfmqpA segtg RS5_BACST : 29- 35: vvkgg RrlrfsA lvvvg RS5_BACST : 61- 67: vpeai RkaiedA kknli RS5_BACST : 112- 118: aggpa RavlelA gisdi RS5_BACSU : 29- 35: vvkgg RrfrfaA lvvvg RS5_BACSU : 61- 67: vpeai RkavedA kknli RS5_BACSU : 112- 118: aggpv RavlelA gvadi RS5_CHLTR : 31- 37: vvkgg RkfsfsA lilvg RS5_CHLTR : 47- 53: gdrkg RlgfgfA kanel RS5_CHLTR : 63- 69: ltdai RkggdaA rknlv RS5_CHLTR : 115- 121: agsri RlilemA gvkdi RS5_CYAPA : 119- 125: aggav RtvlelA gvrni RS5_ECOLI : 28- 34: tvkgg RifsftA ltvvg RS5_ECOLI : 68- 74: mekar RnminvA lnngt RS5_ECOLI : 92- 98: vhtgs RvfmqpA segtg RS5_ECOLI : 111- 117: aggam RavlevA gvhnv RS5_HAEIN : 29- 35: tvkgg RimsftA ltvvg RS5_HAEIN : 69- 75: mekar RnminvA lnegt RS5_HAEIN : 93- 99: vhtgs RvfmqpA segtg RS5_HAEIN : 112- 118: aggam RavlevA gvrnv RS5_HAEIN : 121- 127: evagv RnvlskA ygstn RS5_HALMA : 159- 165: ggetv RkvlelA giedi RS5_HALMA : 179- 185: ssgnt RttvnfA katfn RS5_METVA : 75- 81: mhksg RraryrA tvvvg RS5_METVA : 107- 113: vgpai RkaiaqA klsli RS5_METVA : 157- 163: llpap RgvglvA gnvak RS5_METVA : 188- 194: tygdt RttynfA eatfd RS5_MICLU : 26- 32: vskvg RrfsftA lvvvg RS5_MICLU : 109- 115: aggpv RavlecA gihdv RS5_MYCCA : 63- 69: vtkgg RhfrfaA vvvvg RS5_STRCO : 18- 24: vvkgg RrfsftA lvvvg RS5_STRCO : 101- 107: aggpv RavlecA gihdv RS5_STRCO : 138- 144: lkglq RpeeiaA rrglp RS5_THETH : 14- 20: milir RtarmqA ggrrf RS5_THETH : 23- 29: mqagg RrfrfgA lvvvg RT05_YEAST : 187- 193: gegks ReemskA ifkah RT05_YEAST : 266- 272: kvyks RndmniA kgtie Number of patterns evaluated by Pratt:268 Total running time: 1 seconds