------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 36 sequences from file RIBOSOMAL_S2_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 36 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_S2_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: NABA_YEAST 251 NABB_YEAST 251 RS2_ASTLO 242 RS2_BACSU 20 RS2_ECOLI 240 RS2_EPIVI 237 RS2_EUGGR 240 RS2_GALSU 233 RS2_HAEIN 251 RS2_HALMA 266 RS2_MAIZE 236 RS2_MARPO 235 RS2_ORYSA 236 RS2_PEA 236 RS2_SPICI 183 RS2_SPIOL 236 RS2_SPIPL 251 RS2_TOBAC 236 RS2_WHEAT 236 RSP4_ARATH 298 RSP4_BOVIN 295 RSP4_CAEEL 276 RSP4_CHLVR 293 RSP4_CRIGR 295 RSP4_DROME 270 RSP4_ECHGR 268 RSP4_HUMAN 295 RSP4_MOUSE 295 RSP4_RAT 295 RSP4_STRPU 264 RSP4_TRIGR 316 RSP4_URECA 317 RT02_ACACA 312 RT02_MARPO 237 RT02_PROWI 274 RT04_YEAST 394 Pratt run started at Thu Feb 6 21:06:15 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 7.8401 75( 36) F-x(3,4)-T 2: 7.8401 136( 36) A-x(1,2)-V 3: 7.8401 145( 36) L-x(1,2)-A 4: 7.8401 116( 36) L-x(0,1)-L 5: 7.3401 136( 36) G-x(2,4)-T 6: 7.3401 69( 36) F-x(0,2)-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 7.8401 75( 36) F-x(3,4)-T B 2: 7.8401 136( 36) A-x(1,2)-V C 3: 7.8401 145( 36) L-x(1,2)-A D 4: 7.8401 116( 36) L-x(0,1)-L E 5: 7.3401 136( 36) G-x(2,4)-T F 6: 7.3401 69( 36) F-x(0,2)-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 7.8401 75( 36) F-x(3,4)-T Occurences: 75(36) NABA_YEAST : 88- 92: ravlk Faah-T gatpi NABA_YEAST : 106- 111: ftpgs FtnyiT rsfke NABB_YEAST : 88- 92: ravlk Faah-T gatpi NABB_YEAST : 106- 111: ftpgs FtnyiT rsfke RS2_ASTLO : 84- 88: dklkh Fanv-T ksfyi RS2_ASTLO : 102- 107: wlggt FtnwiT tkgci RS2_ASTLO : 192- 196: tisil Fcld-T dcdpt RS2_BACSU : 15- 19: eagvx Fgxz-T x RS2_ECOLI : 15- 19: kagvh Fghq-T rywnp RS2_ECOLI : 125- 129: sqdgt Fdkl-T kkeal RS2_ECOLI : 183- 188: lgipv FaivdT nsdpd RS2_EPIVI : 20- 24: gagvs Fghg-T rkwnp RS2_EPIVI : 44- 48: hkgih Ftnl-T ktarf RS2_EPIVI : 71- 76: srgkq FlivdT knkaa RS2_EUGGR : 73- 78: vctkr FfsilT qkial RS2_EUGGR : 74- 78: ctkrf Fsil-T qkial RS2_GALSU : 69- 74: kkgkk FlfvgT rqeln RS2_HAEIN : 27- 31: nagvh Fghq-T rywnp RS2_HAEIN : 137- 141: sqdgt Fdkl-T kkeal RS2_HAEIN : 195- 200: lgipv FaivdT nstpa RS2_HALMA : 168- 172: vrtgr Fipg-T ltnpd RS2_MAIZE : 71- 76: sqgks FlivgT kkraa RS2_MAIZE : 101- 106: vnkkw FsgmlT nwsit RS2_MARPO : 71- 76: skgkq FlivgT kyqaa RS2_ORYSA : 71- 76: sqgks FlivgT kkraa RS2_ORYSA : 101- 106: vnkkw FsgmlT nwsit RS2_PEA : 20- 24: eagvh Fghd-T rkwnp RS2_PEA : 71- 76: skgkq FlivgT kkkaa RS2_PEA : 118- 123: trlgk FrdlrT eqktg RS2_SPICI : 17- 21: eagaq Fghq-T krwnp RS2_SPIOL : 20- 24: eagvh Fghg-T rkwnp RS2_SPIOL : 71- 76: srgkq FlivgT knkaa RS2_SPIPL : 16- 20: kagvh Fghq-T rfwnp RS2_SPIPL : 126- 130: andgt Fdkl-T kkeal RS2_TOBAC : 20- 24: eagvh Fghg-T rkwnp RS2_TOBAC : 71- 76: srgkq FlivgT knkaa RS2_WHEAT : 71- 76: sqgts FlivgT kkrat RS2_WHEAT : 101- 106: vnkkw FsgmlT nwsit RSP4_ARATH : 53- 58: dgiyi FnlgkT weklq RSP4_ARATH : 94- 98: ravlk Faqy-T ganai RSP4_BOVIN : 18- 23: edvlk FlaagT hlggt RSP4_BOVIN : 90- 94: ravlk Faaa-T gatpi RSP4_BOVIN : 227- 232: vtkee FqgewT apape RSP4_CAEEL : 90- 94: rallk Faah-T gatai RSP4_CAEEL : 208- 213: mpdly FyrdpT eteke RSP4_CHLVR : 90- 94: ravlk Faqs-T gaipi RSP4_CHLVR : 103- 107: piagr Ftpg-T ftnqi RSP4_CRIGR : 18- 23: edvlk FlaagT hlggt RSP4_CRIGR : 90- 94: ravlk Faaa-T gatpi RSP4_CRIGR : 103- 107: piagr Ftpg-T ftnqi RSP4_CRIGR : 227- 232: vtkee FqgewT apape RSP4_DROME : 90- 94: ravlk Faky-T dttpi RSP4_ECHGR : 90- 94: rgalk Fghy-T gttsv RSP4_HUMAN : 18- 23: edvlk FlaagT hlggt RSP4_HUMAN : 90- 94: ravlk Faaa-T gatpi RSP4_HUMAN : 103- 107: piagr Ftpg-T ftnqi RSP4_HUMAN : 227- 232: vtkee FqgewT apape RSP4_MOUSE : 90- 94: ravlk Faaa-T gatpi RSP4_MOUSE : 103- 107: piagr Ftpg-T ftnqi RSP4_MOUSE : 227- 232: vtkee FqgewT apape RSP4_RAT : 18- 23: edvlk FlaagT hlggt RSP4_RAT : 90- 94: ravlk Faaa-T gatpi RSP4_RAT : 103- 107: piagr Ftpg-T ftnqi RSP4_RAT : 227- 232: vtkee FqgewT apape RSP4_STRPU : 13- 17: ravlk Fgah-T gatpv RSP4_TRIGR : 90- 94: ravlk Fgah-T gatpi RSP4_URECA : 90- 94: ravlk Fahy-T gatpi RSP4_URECA : 103- 107: piagr Ftpg-T ftnqi RSP4_URECA : 237- 242: tadqa FtapgT evsdw RT02_ACACA : 44- 49: kntni FnlnyT yflak RT02_ACACA : 93- 97: qlysl Fpei-T flnsk RT02_MARPO : 146- 151: kmqkc FegimT hnipd RT02_MARPO : 213- 218: kfvyl FcnliT ktvil RT02_PROWI : 86- 90: clsra Fyvl-T qildn RT04_YEAST : 107- 111: llnkl Fdsk-T ldgqs B 2: 7.8401 136( 36) A-x(1,2)-V Occurences: 136(36) NABA_YEAST : 25- 28: nthlg ArnV qvhqe NABA_YEAST : 135- 138: qaike AsyV nipvi NABA_YEAST : 177- 180: iwyll AreV lrlrg NABA_YEAST : 186- 188: lrlrg Al-V drtqp NABA_YEAST : 246- 249: waeen AdnV ew NABB_YEAST : 25- 28: nthlg ArnV qvhqe NABB_YEAST : 135- 138: qaike AsyV nipvi NABB_YEAST : 177- 180: iwyll AreV lrlrg NABB_YEAST : 186- 188: lrlrg Al-V drtqp NABB_YEAST : 246- 249: waeen AdnV ew RS2_ASTLO : 85- 87: klkhf An-V tksfy RS2_BACSU : 11- 13: hqlle Ag-V xfgxz RS2_ECOLI : 1- 3: At-V smrdm RS2_ECOLI : 11- 13: rdmlk Ag-V hfghq RS2_ECOLI : 159- 162: gglpd AlfV idadh RS2_ECOLI : 184- 186: gipvf Ai-V dtnsd RS2_ECOLI : 217- 220: ylgav AatV regrs RS2_ECOLI : 218- 220: lgava At-V regrs RS2_EPIVI : 16- 18: eemig Ag-V sfghg RS2_EPIVI : 139- 141: kkkde Aa-V krqla RS2_EUGGR : 65- 68: rkgkr AlfV ctkrf RS2_GALSU : 13- 16: lsell AarV hlghr RS2_GALSU : 14- 16: sella Ar-V hlghr RS2_HAEIN : 13- 15: kenim Aq-V smrdm RS2_HAEIN : 23- 25: rdmin Ag-V hfghq RS2_HAEIN : 171- 174: gglpd AlfV igadh RS2_HAEIN : 196- 198: gipvf Ai-V dtnst RS2_HAEIN : 205- 207: tnstp Ag-V dfvip RS2_HAEIN : 229- 232: yvsaa AaaV kegrg RS2_HAEIN : 230- 232: vsaaa Aa-V kegrg RS2_HAEIN : 240- 242: grgne Aq-V aeela RS2_HALMA : 87- 89: edylg Ag-V higtq RS2_HALMA : 161- 163: aeaig Ar-V rtgrf RS2_HALMA : 196- 199: dpigd AqaV keait RS2_HALMA : 202- 205: qavke AitV gipvi RS2_HALMA : 235- 238: nkgrk AlsV vywll RS2_MAIZE : 16- 18: kemie Ag-V hfghg RS2_MAIZE : 81- 84: tkkra AdlV asaai RS2_MARPO : 16- 18: eemme Ag-V hfghq RS2_ORYSA : 16- 18: kemie Ag-V hfghg RS2_ORYSA : 81- 84: tkkra AdlV asaai RS2_PEA : 16- 18: eemme Ag-V hfghd RS2_PEA : 81- 84: tkkka AdsV traai RS2_SPICI : 162- 165: rklpq AliV vdpke RS2_SPIOL : 16- 18: eemme Ag-V hfghg RS2_SPIOL : 81- 84: tknka AdsV araai RS2_SPIOL : 138- 140: lpkrd Aa-V vkrql RS2_SPIOL : 138- 141: lpkrd AavV krqls RS2_SPIOL : 139- 141: pkrda Av-V krqls RS2_SPIPL : 12- 14: rdmlk Ag-V hfghq RS2_SPIPL : 160- 163: gglpd AlfV idvdh RS2_SPIPL : 185- 187: gipvi Av-V dtnsn RS2_TOBAC : 16- 18: eemme Ag-V hfghg RS2_TOBAC : 81- 84: tknka AdsV ewaai RS2_WHEAT : 16- 18: kemie Ag-V hfghg RSP4_ARATH : 10- 12: gsass Ah-V sqkea RSP4_ARATH : 17- 19: vsqke Ad-V rmmca RSP4_ARATH : 24- 27: vrmmc AaeV hlgtk RSP4_ARATH : 25- 27: rmmca Ae-V hlgtk RSP4_ARATH : 65- 68: eklqm AarV ivaie RSP4_ARATH : 66- 68: klqma Ar-V ivaie RSP4_ARATH : 183- 186: lfwll ArmV lqmrg RSP4_BOVIN : 4- 7: msg AldV lqmke RSP4_BOVIN : 64- 66: llaar Ai-V aienp RSP4_BOVIN : 72- 74: aienp Ad-V sviss RSP4_BOVIN : 137- 140: qplte AsyV nlpti RSP4_BOVIN : 168- 171: cnnkg AhsV glmww RSP4_BOVIN : 179- 182: mwwml AreV lrmrg RSP4_CAEEL : 66- 68: aarai Aa-V enpad RSP4_CAEEL : 72- 74: avenp Ad-V vvvsa RSP4_CAEEL : 72- 75: avenp AdvV vvsar RSP4_CAEEL : 137- 140: qavte AsyV gvpvi RSP4_CAEEL : 224- 226: etgah Ad-V aeaqe RSP4_CHLVR : 20- 23: vvkfl AagV hlgst RSP4_CHLVR : 21- 23: vkfla Ag-V hlgst RSP4_CHLVR : 72- 74: sienp Ad-V cviss RSP4_CHLVR : 137- 140: qalte AsyV nipvi RSP4_CHLVR : 179- 182: mwwil AreV lhlrg RSP4_CRIGR : 4- 7: msg AldV lqmke RSP4_CRIGR : 64- 66: llaar Ai-V aienp RSP4_CRIGR : 72- 74: aienp Ad-V sviss RSP4_CRIGR : 137- 140: qplte AsyV nlpti RSP4_CRIGR : 168- 171: cnnkg AhsV glmww RSP4_CRIGR : 179- 182: mwwml AreV rrmrg RSP4_DROME : 43- 46: vykrr AdgV nilnl RSP4_DROME : 64- 66: qlaar Ai-V aidnp RSP4_DROME : 137- 140: qpime AsyV nipvi RSP4_DROME : 179- 182: mwwll AreV lrlrg RSP4_DROME : 241- 244: ettnw AdeV aaetv RSP4_DROME : 246- 249: adeva AetV ggved RSP4_ECHGR : 20- 23: irlmv AakV hlgst RSP4_ECHGR : 21- 23: rlmva Ak-V hlgst RSP4_ECHGR : 72- 74: aienp Ad-V viigg RSP4_ECHGR : 72- 75: aienp AdvV iiggq RSP4_ECHGR : 178- 181: mlwml AreV rriwg RSP4_ECHGR : 240- 243: apewp AesV sprcw RSP4_HUMAN : 4- 7: msg AldV lqmke RSP4_HUMAN : 64- 66: llaar Ai-V aienp RSP4_HUMAN : 72- 74: aienp Ad-V sviss RSP4_HUMAN : 137- 140: qplte AsyV nlpti RSP4_HUMAN : 168- 171: cnnkg AhsV glmww RSP4_HUMAN : 179- 182: mwwml AreV lrmrg RSP4_MOUSE : 4- 7: msg AldV lqmke RSP4_MOUSE : 64- 66: llaar Ai-V aienp RSP4_MOUSE : 72- 74: aienp Ad-V sviss RSP4_MOUSE : 137- 140: qplte AsyV nlpti RSP4_MOUSE : 155- 157: tdspl Ay-V diaip RSP4_MOUSE : 168- 171: cnnkg AhsV glmww RSP4_MOUSE : 179- 182: mwwml AreV lrmrg RSP4_RAT : 64- 66: llaar Ai-V aienp RSP4_RAT : 72- 74: aienp Ad-V sviss RSP4_RAT : 137- 140: qplte AsyV nlpti RSP4_RAT : 168- 171: cnnkg AhsV glmww RSP4_RAT : 179- 182: mwwml AreV lrmrg RSP4_STRPU : 19- 22: gahtg AtpV agryt RSP4_STRPU : 60- 63: qpvte AsyV nipvi RSP4_STRPU : 144- 147: eardr AvaV keepa RSP4_STRPU : 185- 188: dwaad AnkV agapa RSP4_STRPU : 203- 206: qwand AskV aapaa RSP4_STRPU : 228- 231: svdap AapV apaaa RSP4_STRPU : 229- 231: vdapa Ap-V apaaa RSP4_TRIGR : 72- 74: aienp Ad-V cviss RSP4_TRIGR : 137- 140: qpvte AsyV nipvi RSP4_TRIGR : 221- 224: eardr AtaV keepa RSP4_TRIGR : 250- 252: agqpv Ae-V tdwaa RSP4_TRIGR : 257- 260: vtdwa AdsV kapva RSP4_TRIGR : 262- 264: adsvk Ap-V agigt RSP4_URECA : 27- 30: ashlg AnnV dfqme RSP4_URECA : 137- 140: qpvte AsyV nipvi RSP4_URECA : 179- 182: mwwml AreV lrlrg RSP4_URECA : 248- 251: evsdw AseV pvapv RSP4_URECA : 254- 256: sevpv Ap-V pilag RSP4_URECA : 260- 263: pvpil AggV daatt RT02_ACACA : 150- 152: nipsi Ai-V dsidn RT02_MARPO : 182- 184: qipiv Al-V dsnip RT02_PROWI : 85- 88: kclsr AfyV ltqil RT04_YEAST : 191- 193: eslms Ag-V hlgqs RT04_YEAST : 232- 235: sylkr AakV vegvs RT04_YEAST : 233- 235: ylkra Ak-V vegvs RT04_YEAST : 233- 236: ylkra AkvV egvse C 3: 7.8401 145( 36) L-x(1,2)-A Occurences: 145(36) NABA_YEAST : 2- 4: s Lp-A tfdlt NABA_YEAST : 15- 18: pedaq LllA anthl NABA_YEAST : 16- 18: edaql Ll-A anthl NABA_YEAST : 16- 19: edaql LlaA nthlg NABA_YEAST : 17- 19: daqll La-A nthlg NABA_YEAST : 23- 25: aanth Lg-A rnvqv NABA_YEAST : 56- 59: ktwek LvlA ariia NABA_YEAST : 58- 60: weklv La-A riiaa NABA_YEAST : 86- 89: gqrav LkfA ahtga NABA_YEAST : 175- 177: gliwy Ll-A revlr NABA_YEAST : 183- 186: revlr LrgA lvdrt NABB_YEAST : 2- 4: s Lp-A tfdlt NABB_YEAST : 15- 18: pedaq LllA anthl NABB_YEAST : 16- 18: edaql Ll-A anthl NABB_YEAST : 16- 19: edaql LlaA nthlg NABB_YEAST : 17- 19: daqll La-A nthlg NABB_YEAST : 23- 25: aanth Lg-A rnvqv NABB_YEAST : 56- 59: ktwek LvlA ariia NABB_YEAST : 58- 60: weklv La-A riiaa NABB_YEAST : 86- 89: gqrav LkfA ahtga NABB_YEAST : 127- 129: vtdpr Ld-A qaike NABB_YEAST : 175- 177: gliwy Ll-A revlr NABB_YEAST : 183- 186: revlr LrgA lvdrt RS2_ASTLO : 173- 176: igqsd LkkA igecl RS2_BACSU : 8- 11: ismhq LleA gvxfg RS2_BACSU : 9- 11: smhql Le-A gvxfg RS2_ECOLI : 9- 11: smrdm Lk-A gvhfg RS2_ECOLI : 156- 159: kdmgg LpdA lfvid RS2_ECOLI : 213- 215: avtly Lg-A vaatv RS2_EPIVI : 54- 57: ktarf LseA cdlvf RS2_EPIVI : 221- 224: lilnk LvfA icegr RS2_EUGGR : 48- 51: qtivc LkkA cnfli RS2_EUGGR : 176- 179: reckk LgiA sitil RS2_GALSU : 11- 13: vtlse Ll-A arvhl RS2_GALSU : 11- 14: vtlse LlaA rvhlg RS2_GALSU : 12- 14: tlsel La-A rvhlg RS2_GALSU : 52- 55: qtafl LgeA cdyvk RS2_GALSU : 61- 63: cdyvk Ll-A kkgkk RS2_GALSU : 169- 171: dqrkd Lt-A vqecn RS2_HAEIN : 168- 171: kdmgg LpdA lfvig RS2_HAEIN : 246- 248: qvaee La-A dae RS2_HALMA : 9- 11: nekeg Ld-A sdsdf RS2_HALMA : 85- 87: pvedy Lg-A gvhig RS2_HALMA : 140- 142: epeqi La-A ssrqy RS2_HALMA : 242- 244: svvyw Ll-A netld RS2_MAIZE : 54- 57: rtarf LseA cdlvf RS2_MAIZE : 83- 85: kraad Lv-A saair RS2_MAIZE : 121- 123: sqfrd Lr-A eekmg RS2_MAIZE : 221- 224: lilnk LvfA isegr RS2_MARPO : 54- 57: qtarf LseA cdlva RS2_MARPO : 60- 62: seacd Lv-A nassk RS2_MARPO : 89- 91: iessa Lk-A rchyv RS2_MARPO : 221- 224: wilnk LtlA icegr RS2_ORYSA : 54- 57: rttrf LseA cdlvf RS2_ORYSA : 83- 85: kraad Lv-A saair RS2_ORYSA : 121- 123: sqfrd Lr-A eekme RS2_ORYSA : 221- 224: lilnk LvfA icegr RS2_PEA : 54- 57: ktarf LseA cdlaf RS2_PEA : 221- 224: lilnk LvfA icegr RS2_SPICI : 10- 13: ltrem LweA gaqfg RS2_SPICI : 57- 59: edvkk Lm-A niaar RS2_SPICI : 159- 162: kgwrk LpqA livvd RS2_SPIOL : 54- 57: rtarf LseA cdlvf RS2_SPIOL : 221- 224: liltk LvfA icegr RS2_SPIPL : 10- 12: tmrdm Lk-A gvhfg RS2_SPIPL : 117- 119: krfrd Le-A qandg RS2_SPIPL : 157- 160: kdmgg LpdA lfvid RS2_TOBAC : 54- 57: rtarf LseA cdlvf RS2_TOBAC : 221- 224: lilnk LvfA icegr RS2_WHEAT : 54- 57: rtarf LseA cdlvf RS2_WHEAT : 83- 85: kratd Lv-A saair RS2_WHEAT : 121- 123: sqfrd Lr-A eekmg RSP4_ARATH : 62- 65: ktwek LqmA arviv RSP4_ARATH : 92- 95: gqrav LkfA qytga RSP4_ARATH : 181- 183: gclfw Ll-A rmvlq RSP4_ARATH : 231- 233: aeyga Lp-A peygm RSP4_BOVIN : 19- 21: dvlkf La-A gthlg RSP4_BOVIN : 58- 61: rtwek LllA araiv RSP4_BOVIN : 59- 61: twekl Ll-A araiv RSP4_BOVIN : 59- 62: twekl LlaA raiva RSP4_BOVIN : 60- 62: wekll La-A raiva RSP4_BOVIN : 88- 91: gqrav LkfA aatga RSP4_BOVIN : 134- 137: adhqp LteA syvnl RSP4_CAEEL : 18- 20: edvmk Ll-A tqahl RSP4_CAEEL : 58- 61: ktwek LllA araia RSP4_CAEEL : 59- 61: twekl Ll-A araia RSP4_CAEEL : 59- 62: twekl LlaA raiaa RSP4_CAEEL : 60- 62: wekll La-A raiaa RSP4_CAEEL : 88- 91: aqral LkfA ahtga RSP4_CHLVR : 19- 21: dvvkf La-A gvhlg RSP4_CHLVR : 58- 61: ktwek LilA ariia RSP4_CHLVR : 60- 62: wekli La-A riias RSP4_CHLVR : 88- 91: gtrav LkfA qstga RSP4_CHLVR : 134- 137: hdnqa LteA syvni RSP4_CRIGR : 19- 21: dvlkf La-A gthlg RSP4_CRIGR : 58- 61: rtwek LllA araiv RSP4_CRIGR : 59- 61: twekl Ll-A araiv RSP4_CRIGR : 59- 62: twekl LlaA raiva RSP4_CRIGR : 60- 62: wekll La-A raiva RSP4_CRIGR : 88- 91: gqrav LkfA aatga RSP4_CRIGR : 134- 137: adhqp LteA syvnl RSP4_DROME : 19- 21: ditkm Lv-A tthlg RSP4_DROME : 58- 61: ktwek LqlA araiv RSP4_DROME : 60- 62: weklq La-A raiva RSP4_DROME : 88- 91: gqrav LkfA kytdt RSP4_DROME : 177- 179: glmww Ll-A revlr RSP4_ECHGR : 17- 20: eddir LmvA akvhl RSP4_ECHGR : 58- 61: ktwek LllA araic RSP4_ECHGR : 59- 61: twekl Ll-A araic RSP4_ECHGR : 59- 62: twekl LlaA raica RSP4_ECHGR : 60- 62: wekll La-A raica RSP4_HUMAN : 19- 21: dvlkf La-A gthlg RSP4_HUMAN : 58- 61: rtwek LllA araiv RSP4_HUMAN : 59- 61: twekl Ll-A araiv RSP4_HUMAN : 59- 62: twekl LlaA raiva RSP4_HUMAN : 60- 62: wekll La-A raiva RSP4_HUMAN : 88- 91: gqrav LkfA aatga RSP4_HUMAN : 134- 137: adhqp LteA syvnl RSP4_MOUSE : 18- 20: edvlk Ll-A agthl RSP4_MOUSE : 18- 21: edvlk LlaA gthlg RSP4_MOUSE : 19- 21: dvlkl La-A gthlg RSP4_MOUSE : 58- 61: rtwek LllA araiv RSP4_MOUSE : 59- 61: twekl Ll-A araiv RSP4_MOUSE : 59- 62: twekl LlaA raiva RSP4_MOUSE : 60- 62: wekll La-A raiva RSP4_MOUSE : 88- 91: gqrav LkfA aatga RSP4_MOUSE : 134- 137: adhqp LteA syvnl RSP4_RAT : 19- 21: dvlkf La-A gthlg RSP4_RAT : 58- 61: rtwek LllA araiv RSP4_RAT : 59- 61: twekl Ll-A araiv RSP4_RAT : 59- 62: twekl LlaA raiva RSP4_RAT : 60- 62: wekll La-A raiva RSP4_RAT : 88- 91: gqrav LkfA aatga RSP4_RAT : 134- 137: adhqp LteA syvnl RSP4_STRPU : 108- 111: revlr LrgA isrdv RSP4_TRIGR : 58- 61: rtwek LlmA ariiv RSP4_TRIGR : 59- 61: twekl Lm-A ariiv RSP4_TRIGR : 59- 62: twekl LmaA riiva RSP4_TRIGR : 185- 188: revlr LrgA isrdv RSP4_URECA : 19- 22: dvtkf LacA shlga RSP4_URECA : 25- 27: acash Lg-A nnvdf RSP4_URECA : 59- 61: twekv Ll-A araia RSP4_URECA : 59- 62: twekv LlaA raiaa RSP4_URECA : 60- 62: wekvl La-A raiaa RSP4_URECA : 88- 91: gqrav LkfA hytga RT02_ACACA : 12- 14: itvnq Lv-A sdlfl RT02_MARPO : 124- 127: sahpn LkdA ftssp RT02_MARPO : 171- 173: nsmai Le-A nqlqi RT02_PROWI : 82- 85: qtqkc LsrA fyvlt RT02_PROWI : 219- 221: nknli Le-A nrlqi RT04_YEAST : 89- 91: dkeqq Le-A elsdf RT04_YEAST : 160- 162: mrtak Lg-A tiskv RT04_YEAST : 188- 191: itves LmsA gvhlg RT04_YEAST : 229- 232: qtlsy LkrA akvve RT04_YEAST : 259- 262: gqkrg LeeA akkth RT04_YEAST : 332- 335: enrna LleA iksrv RT04_YEAST : 333- 335: nrnal Le-A iksrv RT04_YEAST : 376- 379: fllgv LarA gqrgl D 4: 7.8401 116( 36) L-x(0,1)-L Occurences: 116(36) NABA_YEAST : 15- 16: pedaq L-L laant NABA_YEAST : 15- 17: pedaq LlL aanth NABA_YEAST : 16- 17: edaql L-L aanth NABA_YEAST : 56- 58: ktwek LvL aarii NABA_YEAST : 175- 176: gliwy L-L arevl NABA_YEAST : 181- 183: larev LrL rgalv NABB_YEAST : 15- 16: pedaq L-L laant NABB_YEAST : 15- 17: pedaq LlL aanth NABB_YEAST : 16- 17: edaql L-L aanth NABB_YEAST : 56- 58: ktwek LvL aarii NABB_YEAST : 175- 176: gliwy L-L arevl NABB_YEAST : 181- 183: larev LrL rgalv RS2_ASTLO : 15- 17: mffar LhL ghfst RS2_ASTLO : 127- 129: ssvdg LkL ydslt RS2_ASTLO : 181- 183: aigec LkL nvpti RS2_BACSU : 8- 9: ismhq L-L eagvx RS2_ECOLI : 211- 213: iravt LyL gavaa RS2_EPIVI : 216- 218: issir LiL nklvf RS2_EUGGR : 41- 42: lhiid L-L qtivc RS2_EUGGR : 125- 126: ekhhn L-L tkker RS2_EUGGR : 132- 134: tkker LvL kkkkl RS2_EUGGR : 139- 141: lkkkk LkL kkyfs RS2_EUGGR : 209- 211: ilsvs LiL svlcn RS2_GALSU : 11- 12: vtlse L-L aarvh RS2_GALSU : 51- 52: vqtaf L-L geacd RS2_GALSU : 61- 62: cdyvk L-L akkgk RS2_GALSU : 102- 103: rwlgg L-L tnwvt RS2_GALSU : 211- 213: icsvk LiL gklvd RS2_HAEIN : 58- 60: nlekt LpL fneal RS2_HAEIN : 155- 157: remek LeL slggi RS2_HAEIN : 157- 159: mekle LsL ggikd RS2_HALMA : 77- 78: qsead L-L ipved RS2_HALMA : 242- 243: svvyw L-L anetl RS2_MAIZE : 216- 218: mtsir LiL nklvf RS2_MARPO : 221- 223: wilnk LtL aiceg RS2_ORYSA : 216- 218: mtsir LiL nklvf RS2_PEA : 216- 218: iasir LiL nklvf RS2_SPICI : 127- 129: eknge LkL lpkke RS2_SPICI : 129- 130: ngelk L-L pkkeq RS2_SPIOL : 216- 218: iasir LiL tklvf RS2_SPIPL : 47- 49: nlekt LpL fndal RS2_TOBAC : 216- 218: issir LiL nklvf RS2_WHEAT : 216- 218: mtsir LiL nklvf RSP4_ARATH : 125- 126: fsepr L-L iltdp RSP4_ARATH : 126- 128: seprl LiL tdprt RSP4_ARATH : 181- 182: gclfw L-L armvl RSP4_BOVIN : 58- 59: rtwek L-L laara RSP4_BOVIN : 58- 60: rtwek LlL aarai RSP4_BOVIN : 59- 60: twekl L-L aarai RSP4_BOVIN : 121- 122: frepr L-L vvtdp RSP4_CAEEL : 18- 19: edvmk L-L atqah RSP4_CAEEL : 58- 59: ktwek L-L laara RSP4_CAEEL : 58- 60: ktwek LlL aarai RSP4_CAEEL : 59- 60: twekl L-L aarai RSP4_CAEEL : 87- 88: yaqra L-L kfaah RSP4_CAEEL : 121- 122: fkepr L-L visdp RSP4_CAEEL : 154- 156: ntesp LkL idigv RSP4_CAEEL : 183- 185: larei LiL rgkis RSP4_CHLVR : 8- 10: egida LsL keedv RSP4_CHLVR : 58- 60: ktwek LiL aarii RSP4_CHLVR : 121- 122: frepr L-L istdp RSP4_CHLVR : 183- 185: larev LhL rgiis RSP4_CRIGR : 58- 59: rtwek L-L laara RSP4_CRIGR : 58- 60: rtwek LlL aarai RSP4_CRIGR : 59- 60: twekl L-L aarai RSP4_CRIGR : 121- 122: frepr L-L vvtdp RSP4_DROME : 8- 10: ggldi LsL keddi RSP4_DROME : 49- 51: dgvni LnL gktwe RSP4_DROME : 58- 60: ktwek LqL aarai RSP4_DROME : 121- 122: frepr L-L vvtdp RSP4_DROME : 177- 178: glmww L-L arevl RSP4_DROME : 183- 185: larev LrL rgtis RSP4_DROME : 220- 221: aaake L-L pppki RSP4_ECHGR : 8- 10: ggiea LeL keddi RSP4_ECHGR : 58- 59: ktwek L-L laara RSP4_ECHGR : 58- 60: ktwek LlL aarai RSP4_ECHGR : 59- 60: twekl L-L aarai RSP4_ECHGR : 121- 122: fkepr L-L ivcdp RSP4_ECHGR : 172- 174: kysia LmL wmlar RSP4_ECHGR : 200- 202: dvimd LfL mrehv RSP4_HUMAN : 58- 59: rtwek L-L laara RSP4_HUMAN : 58- 60: rtwek LlL aarai RSP4_HUMAN : 59- 60: twekl L-L aarai RSP4_HUMAN : 121- 122: frepr L-L vvtdp RSP4_MOUSE : 16- 18: keedv LkL laagt RSP4_MOUSE : 18- 19: edvlk L-L aagth RSP4_MOUSE : 58- 59: rtwek L-L laara RSP4_MOUSE : 58- 60: rtwek LlL aarai RSP4_MOUSE : 59- 60: twekl L-L aarai RSP4_MOUSE : 121- 122: frepr L-L vvtdp RSP4_RAT : 58- 59: rtwek L-L laara RSP4_RAT : 58- 60: rtwek LlL aarai RSP4_RAT : 59- 60: twekl L-L aarai RSP4_RAT : 121- 122: frepr L-L vvtdp RSP4_STRPU : 106- 108: lsrev LrL rgais RSP4_TRIGR : 8- 10: ggldc LaL keddv RSP4_TRIGR : 58- 59: rtwek L-L maari RSP4_TRIGR : 183- 185: lsrev LrL rgais RSP4_URECA : 8- 10: gsidt LaL keedv RSP4_URECA : 59- 60: twekv L-L aarai RSP4_URECA : 121- 122: frepr L-L vvtdp RSP4_URECA : 183- 185: larev LrL rgtis RT02_ACACA : 17- 19: lvasd LfL gyhia RT02_ACACA : 70- 72: vnkgh LwL vnenf RT02_ACACA : 230- 231: fkkrf L-L eniif RT02_ACACA : 263- 264: itskt L-L fkwkm RT02_ACACA : 271- 272: kwkmp L-L ilssv RT02_ACACA : 272- 274: wkmpl LiL ssvfk RT02_MARPO : 6- 7: mynsn L-L viqkl RT02_MARPO : 12- 13: lviqk L-L stnay RT02_MARPO : 68- 69: sakgh L-L lvntn RT02_MARPO : 68- 70: sakgh LlL vntnp RT02_MARPO : 69- 70: akghl L-L vntnp RT02_PROWI : 23- 25: pkinn LhL ktntd RT02_PROWI : 217- 219: gdnkn LiL eanrl RT02_PROWI : 256- 258: sveft LyL ykkly RT04_YEAST : 13- 15: rnfrr LsL lrnps RT04_YEAST : 15- 16: frrls L-L rnpsl RT04_YEAST : 44- 45: ndevm L-L qqkll RT04_YEAST : 49- 50: llqqk L-L ydeir RT04_YEAST : 102- 103: frnya L-L nklfd RT04_YEAST : 146- 148: yssqe LfL rqlnh RT04_YEAST : 247- 249: sggii LfL gtrqg RT04_YEAST : 319- 320: qvkpd L-L vvlnp RT04_YEAST : 332- 333: enrna L-L eaiks RT04_YEAST : 372- 373: rsvnf L-L gvlar E 5: 7.3401 136( 36) G-x(2,4)-T Occurences: 136(36) NABA_YEAST : 99- 102: atpia Grf--T pgsft NABA_YEAST : 104- 107: grftp Gsf--T nyitr NABB_YEAST : 99- 102: atpia Grf--T pgsft NABB_YEAST : 104- 107: grftp Gsf--T nyitr NABB_YEAST : 234- 239: eevte GqaeaT ewaee RS2_ASTLO : 18- 22: arlhl Ghfs-T kwnpk RS2_ASTLO : 99- 103: tedwl Ggtf-T nwitt RS2_ASTLO : 100- 103: edwlg Gtf--T nwitt RS2_BACSU : 16- 19: agvxf Gxz--T x RS2_ECOLI : 16- 19: agvhf Ghq--T rywnp RS2_ECOLI : 97- 101: nhrwl Ggml-T nwktv RS2_ECOLI : 98- 101: hrwlg Gml--T nwktv RS2_ECOLI : 214- 219: vtlyl GavaaT vregr RS2_EPIVI : 21- 24: agvsf Ghg--T rkwnp RS2_EPIVI : 41- 45: svkhk Gihf-T nltkt RS2_EPIVI : 102- 106: nkkwp Ggml-T nwstt RS2_EPIVI : 103- 106: kkwpg Gml--T nwstt RS2_EPIVI : 154- 159: qtylg GikymT rlpdi RS2_EPIVI : 184- 187: eciti Gip--T iglid RS2_EPIVI : 189- 193: gipti Glid-T ncdpd RS2_EUGGR : 96- 100: tkrwl Ggil-T nwiti RS2_EUGGR : 97- 100: krwlg Gil--T nwiti RS2_EUGGR : 147- 152: kkyfs GmrdmT erpei RS2_EUGGR : 177- 182: eckkl GiasiT ildtn RS2_GALSU : 100- 104: nqrwl Ggll-T nwvti RS2_GALSU : 101- 104: qrwlg Gll--T nwvti RS2_HAEIN : 28- 31: agvhf Ghq--T rywnp RS2_HAEIN : 109- 113: nhrwl Ggml-T nwktv RS2_HAEIN : 110- 113: hrwlg Gml--T nwktv RS2_HAEIN : 213- 218: dfvip GnddaT raiql RS2_HALMA : 88- 93: dylga GvhigT qqktq RS2_HALMA : 92- 97: agvhi GtqqkT qdmer RS2_HALMA : 160- 165: faeai GarvrT grfip RS2_HALMA : 171- 174: grfip Gtl--T npdyd RS2_HALMA : 252- 256: tldrr Gaep-T ygldd RS2_MAIZE : 41- 45: sakrk Gthi-T nlart RS2_MAIZE : 103- 106: kkwfs Gml--T nwsit RS2_MAIZE : 154- 159: qrylg GikymT rlpdi RS2_MAIZE : 184- 187: ecail Gip--T islvd RS2_MARPO : 102- 106: nqkwl Ggml-T nwsti RS2_MARPO : 103- 106: qkwlg Gml--T nwsti RS2_MARPO : 154- 159: qkylg GikymT slpdi RS2_MARPO : 184- 187: ecitl Gip--T iclvd RS2_ORYSA : 41- 45: sakrk Gthi-T nlart RS2_ORYSA : 103- 106: kkwfs Gml--T nwsit RS2_ORYSA : 154- 159: qrylg GikymT rlpdi RS2_ORYSA : 184- 187: ecail Gip--T islad RS2_PEA : 21- 24: agvhf Ghd--T rkwnp RS2_PEA : 41- 45: sakrk Gihi-T nltkt RS2_PEA : 103- 106: kkwlr Gml--T nwytt RS2_PEA : 154- 159: etylg GikymT glpdi RS2_PEA : 184- 187: ecitl Gip--T iclid RS2_SPICI : 18- 21: agaqf Ghq--T krwnp RS2_SPICI : 99- 103: nqrwl Ggtl-T nlkti RS2_SPICI : 100- 103: qrwlg Gtl--T nlkti RS2_SPIOL : 21- 24: agvhf Ghg--T rkwnp RS2_SPIOL : 102- 106: nkkwl Ggml-T nwstt RS2_SPIOL : 103- 106: kkwlg Gml--T nwstt RS2_SPIOL : 154- 159: qtylg GikymT glpdi RS2_SPIOL : 184- 187: ecitl Gip--T iclid RS2_SPIPL : 17- 20: agvhf Ghq--T rfwnp RS2_SPIPL : 98- 102: dhrwl Ggml-T nwkti RS2_SPIPL : 99- 102: hrwlg Gml--T nwkti RS2_TOBAC : 21- 24: agvhf Ghg--T rkwnp RS2_TOBAC : 41- 45: sakrk Gihi-T nltrt RS2_TOBAC : 102- 106: nkkwl Ggml-T nwstt RS2_TOBAC : 103- 106: kkwlg Gml--T nwstt RS2_TOBAC : 154- 159: qtylg GikymT gvpdi RS2_TOBAC : 184- 187: ecitl Gip--T icltd RS2_WHEAT : 103- 106: kkwfs Gml--T nwsit RS2_WHEAT : 154- 159: qrylg GikymT rlpdi RS2_WHEAT : 184- 187: ecail Gip--T islvd RSP4_ARATH : 105- 108: anaia Grh--T pgtft RSP4_ARATH : 110- 113: grhtp Gtf--T nqmqt RSP4_ARATH : 240- 245: eygmv GgdqwT taqip RSP4_ARATH : 241- 245: ygmvg Gdqw-T taqip RSP4_ARATH : 241- 246: ygmvg GdqwtT aqipd RSP4_BOVIN : 101- 104: atpia Grf--T pgnft RSP4_BOVIN : 106- 109: grftp Gnf--T nqiqa RSP4_BOVIN : 229- 232: keefq Gew--T apape RSP4_BOVIN : 289- 292: atewv Gtt--T ews RSP4_CAEEL : 106- 109: grfsp Gcl--T nqiqk RSP4_CHLVR : 101- 104: aipia Grf--T pgtft RSP4_CHLVR : 106- 109: grftp Gtf--T nqiqk RSP4_CHLVR : 253- 257: qpvvt Gadw-T aepsv RSP4_CHLVR : 272- 277: aaepa GweadT tavsg RSP4_CHLVR : 282- 286: ttavs Gdwa-T pkted RSP4_CRIGR : 101- 104: atpia Grf--T pgtft RSP4_CRIGR : 106- 109: grftp Gtf--T nqiqa RSP4_CRIGR : 229- 232: keefq Gew--T apape RSP4_CRIGR : 289- 292: atewv Gat--T ews RSP4_DROME : 101- 104: ttpia Grf--T pgaft RSP4_DROME : 106- 109: grftp Gaf--T nqiqp RSP4_ECHGR : 78- 82: dvvii Ggqp-T wqrga RSP4_ECHGR : 79- 82: vviig Gqp--T wqrga RSP4_ECHGR : 91- 94: galkf Ghy--T gttsv RSP4_ECHGR : 91- 96: galkf GhytgT tsvpg RSP4_ECHGR : 101- 104: ttsvp Grf--T pgaft RSP4_ECHGR : 106- 109: grftp Gaf--T nqiqs RSP4_ECHGR : 146- 150: nipvi Gfcn-T dsplq RSP4_HUMAN : 101- 104: atpia Grf--T pgtft RSP4_HUMAN : 106- 109: grftp Gtf--T nqiqa RSP4_HUMAN : 229- 232: keefq Gew--T apape RSP4_HUMAN : 289- 292: atewv Gat--T dws RSP4_MOUSE : 101- 104: atpia Grf--T pgtft RSP4_MOUSE : 106- 109: grftp Gtf--T nqiqa RSP4_MOUSE : 229- 232: keefq Gew--T apape RSP4_MOUSE : 289- 292: atewv Gat--T ews RSP4_RAT : 101- 104: atpia Grf--T pgtft RSP4_RAT : 106- 109: grftp Gtf--T nqiqa RSP4_RAT : 229- 232: keefq Gew--T apape RSP4_RAT : 289- 292: atewv Gat--T ews RSP4_STRPU : 14- 17: avlkf Gah--T gatpv RSP4_STRPU : 24- 27: atpva Gry--T pgtft RSP4_STRPU : 29- 32: grytp Gtf--T nqiqa RSP4_STRPU : 174- 179: ggqpv GvpdvT dwaad RSP4_STRPU : 253- 257: stddw Ggaa-T ndwav RSP4_STRPU : 254- 257: tddwg Gaa--T ndwav RSP4_TRIGR : 91- 94: avlkf Gah--T gatpi RSP4_TRIGR : 101- 104: atpia Gry--T pgtft RSP4_TRIGR : 106- 109: grytp Gtf--T nqiqa RSP4_TRIGR : 266- 269: kapva Gig--T yggps RSP4_URECA : 3- 7: ms Gsid-T lalke RSP4_URECA : 101- 104: atpia Grf--T pgtft RSP4_URECA : 106- 109: grftp Gtf--T nqiqt RSP4_URECA : 262- 267: pilag GvdaaT tedws RT02_ACACA : 36- 41: nffli GkyknT nifnl RT02_MARPO : 20- 25: tnayl GhripT sdfqg RT02_MARPO : 99- 103: nhkwi Ggfl-T nwkhm RT02_MARPO : 100- 103: hkwig Gfl--T nwkhm RT02_MARPO : 148- 151: qkcfe Gim--T hnipd RT02_PROWI : 140- 144: fykwi Ggtl-T nykqi RT02_PROWI : 141- 144: ykwig Gtl--T nykqi RT04_YEAST : 31- 35: qssas Gaan-T pnnnd RT04_YEAST : 114- 118: sktld Gqss-T ttaaa RT04_YEAST : 114- 119: sktld GqsstT taaat RT04_YEAST : 196- 199: agvhl Gqs--T slwrs RT04_YEAST : 268- 273: akkth GyyvsT rwipg RT04_YEAST : 278- 281: trwip Gtl--T nstei F 6: 7.3401 69( 36) F-x(0,2)-G Occurences: 69(36) NABA_YEAST : 80- 81: issrt F--G qravl NABA_YEAST : 101- 104: piagr FtpG sftny NABB_YEAST : 101- 104: piagr FtpG sftny RS2_ASTLO : 153- 154: lakyy F--G ikqmk RS2_ASTLO : 166- 169: ipdvv FliG qsdlk RS2_BACSU : 15- 16: eagvx F--G xztx RS2_ECOLI : 15- 16: kagvh F--G hqtry RS2_ECOLI : 29- 32: pkmkp FifG arnkv RS2_ECOLI : 31- 32: mkpfi F--G arnkv RS2_ECOLI : 68- 70: kgkil Fv-G tkraa RS2_EPIVI : 20- 21: gagvs F--G hgtrk RS2_EPIVI : 20- 23: gagvs FghG trkwn RS2_EUGGR : 145- 147: klkky Fs-G mrdmt RS2_GALSU : 50- 53: lvqta FllG eacdy RS2_GALSU : 71- 73: gkkfl Fv-G trqel RS2_GALSU : 147- 149: klrry Fn-G irkmn RS2_HAEIN : 27- 28: nagvh F--G hqtry RS2_HAEIN : 41- 44: pqmkp FifG arngv RS2_HAEIN : 43- 44: mkpfi F--G arngv RS2_HAEIN : 80- 82: ngkvl Fv-G tkraa RS2_HAEIN : 173- 176: lpdal FviG adheh RS2_HALMA : 168- 171: vrtgr FipG tltnp RS2_MAIZE : 20- 21: eagvh F--G hgikk RS2_MAIZE : 20- 23: eagvh FghG ikkwn RS2_MAIZE : 101- 103: vnkkw Fs-G mltnw RS2_MARPO : 20- 21: eagvh F--G hqark RS2_ORYSA : 20- 21: eagvh F--G hgikk RS2_ORYSA : 20- 23: eagvh FghG ikkwn RS2_ORYSA : 101- 103: vnkkw Fs-G mltnw RS2_PEA : 20- 21: eagvh F--G hdtrk RS2_SPICI : 17- 18: eagaq F--G hqtkr RS2_SPICI : 70- 72: kgkil Fv-G tkkqa RS2_SPIOL : 20- 21: eagvh F--G hgtrk RS2_SPIOL : 20- 23: eagvh FghG trkwn RS2_SPIPL : 16- 17: kagvh F--G hqtrf RS2_SPIPL : 32- 33: mkpyi F--G arnki RS2_SPIPL : 69- 71: nntil Fv-G tkraa RS2_SPIPL : 199- 202: dgvdy FipG nddai RS2_TOBAC : 20- 21: eagvh F--G hgtrk RS2_TOBAC : 20- 23: eagvh FghG trkwn RS2_WHEAT : 20- 21: eagvh F--G hgikk RS2_WHEAT : 20- 23: eagvh FghG ikkwn RS2_WHEAT : 101- 103: vnkkw Fs-G mltnw RSP4_ARATH : 53- 56: dgiyi FnlG ktwek RSP4_BOVIN : 103- 106: piagr FtpG nftnq RSP4_BOVIN : 227- 229: vtkee Fq-G ewtap RSP4_CAEEL : 43- 45: vykrr Fd-G pniin RSP4_CAEEL : 100- 101: gatai F--G rfspg RSP4_CAEEL : 103- 106: aifgr FspG cltnq RSP4_CHLVR : 103- 106: piagr FtpG tftnq RSP4_CHLVR : 232- 234: pyqpd Fs-G nvdqs RSP4_CRIGR : 103- 106: piagr FtpG tftnq RSP4_CRIGR : 227- 229: vtkee Fq-G ewtap RSP4_DROME : 103- 106: piagr FtpG aftnq RSP4_ECHGR : 90- 91: rgalk F--G hytgt RSP4_ECHGR : 103- 106: svpgr FtpG aftnq RSP4_ECHGR : 223- 226: aqepp FeqG kfdaa RSP4_HUMAN : 103- 106: piagr FtpG tftnq RSP4_HUMAN : 227- 229: vtkee Fq-G ewtap RSP4_MOUSE : 103- 106: piagr FtpG tftnq RSP4_MOUSE : 227- 229: vtkee Fq-G ewtap RSP4_RAT : 103- 106: piagr FtpG tftnq RSP4_RAT : 227- 229: vtkee Fq-G ewtap RSP4_STRPU : 13- 14: ravlk F--G ahtga RSP4_TRIGR : 90- 91: ravlk F--G ahtga RSP4_URECA : 103- 106: piagr FtpG tftnq RT02_ACACA : 18- 20: vasdl Fl-G yhian RT02_ACACA : 33- 36: prtnf FliG kyknt RT02_ACACA : 238- 241: niifl FksG ffskk RT02_MARPO : 28- 30: iptsd Fq-G ylygf RT02_MARPO : 146- 148: kmqkc Fe-G imthn RT02_PROWI : 184- 186: kikkc Fq-G ygsvs RT02_PROWI : 209- 212: dvifi FnpG dnknl RT04_YEAST : 248- 250: ggiil Fl-G trqgq RT04_YEAST : 371- 374: lrsvn FllG vlara Number of patterns evaluated by Pratt:14 Total running time: 1 seconds