------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 33 sequences from file RIBOSOMAL_S11 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 33 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_S11.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: R141_MAIZE 149 R141_YEAST 136 R142_MAIZE 150 R142_YEAST 137 RS11_BACST 128 RS11_BACSU 131 RS11_ECOLI 128 RS11_EPIVI 136 RS11_EUGGR 129 RS11_HAEIN 128 RS11_HALMA 128 RS11_MAIZE 143 RS11_MARPO 130 RS11_MYCBO 140 RS11_ORYSA 143 RS11_PEA 138 RS11_PINTH 130 RS11_SPIOL 138 RS11_SULAC 132 RS11_THETH 25 RS11_TOBAC 138 RS14_ARATH 84 RS14_CHLRE 153 RS14_DROME 151 RS14_HUMAN 151 RS14_KLULA 137 RS14_NEUCR 152 RS14_PODCA 151 RS14_RAT 151 RS14_TRYBB 144 RT11_ACACA 173 RT11_MARPO 125 RT11_PROWI 128 Pratt run started at Thu Feb 6 21:06:05 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 8.3401 79( 33) K-x(2)-R 2: 7.8401 179( 33) A-x(3,4)-A 3: 7.8401 155( 33) G-x(0,1)-R 4: 7.8401 84( 33) S-x(0,1)-G 5: 7.8401 83( 33) S-x(2,3)-A 6: 7.8401 103( 33) K-x(2,3)-R 7: 7.8401 76( 33) A-x(4,5)-K 8: 7.3401 96( 33) R-x(1,3)-V 9: 7.3401 127( 33) K-x(0,2)-R 10: 7.3401 78( 33) V-x(0,2)-K Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 8.3401 79( 33) K-x(2)-R B 2: 7.8401 179( 33) A-x(3,4)-A C 3: 7.8401 155( 33) G-x(0,1)-R D 4: 7.8401 84( 33) S-x(0,1)-G E 5: 7.8401 83( 33) S-x(2,3)-A F 6: 7.8401 103( 33) K-x(2,3)-R G 7: 7.8401 76( 33) A-x(4,5)-K H 8: 7.3401 96( 33) R-x(1,3)-V I 9: 7.3401 127( 33) K-x(0,2)-R J 10: 7.3401 78( 33) V-x(0,2)-K Best patterns with alignements: fitness hits(seqs) Pattern A 1: 8.3401 79( 33) K-x(2)-R Occurences: 79(33) R141_MAIZE : 61- 64: ggmkv KadR dessp R141_MAIZE : 123- 126: arsgm KigR iedvt R141_MAIZE : 141- 144: dstrr KggR rgrrl R141_YEAST : 48- 51: ggmkv KadR dessp R141_YEAST : 128- 131: dstrk KggR rgrrl R142_MAIZE : 5- 8: msgr KktR epkee R142_MAIZE : 62- 65: ggmkv KadR dessp R142_MAIZE : 124- 127: arsgm KigR iedvt R142_MAIZE : 142- 145: dstrr KggR rgrrl R142_YEAST : 49- 52: ggmkv KadR dessp R142_YEAST : 129- 132: dstrk KggR rgrrl RS11_BACST : 52- 55: gslgf KgsR kstpf RS11_BACST : 124- 127: gcrpp KrrR v RS11_BACSU : 127- 130: gcrpp KrrR v RS11_ECOLI : 9- 12: pirar KrvR kqvsd RS11_ECOLI : 124- 127: gcrpp KkrR v RS11_EPIVI : 62- 65: gtcgf KgtR rgtsf RS11_EPIVI : 132- 135: gcrpp KkrR v RS11_EUGGR : 125- 128: gcrps KrrR i RS11_HAEIN : 124- 127: gcrpp KkrR v RS11_HALMA : 43- 46: ggtvv KqnR deasp RS11_MAIZE : 12- 15: kigsr KkvR iglrr RS11_MAIZE : 28- 31: rfslr KsaR ritkg RS11_MAIZE : 70- 73: gtcgf KssR kaspy RS11_MAIZE : 139- 142: gcrpp KkrR l RS11_MARPO : 12- 15: kinlr KgkR rlpkg RS11_MYCBO : 17- 20: arkgq KtrR rekkn RS11_MYCBO : 63- 66: ghvvf KgsR kstpf RS11_ORYSA : 28- 31: rfslr KsaR ritkg RS11_ORYSA : 70- 73: gtcgf KssR kaspy RS11_ORYSA : 139- 142: gcrpp KkrR l RS11_PEA : 12- 15: kigsr KtgR igsrk RS11_PEA : 20- 23: rigsr KhpR kipkg RS11_PEA : 62- 65: gscgf KgtR rgtpf RS11_PEA : 117- 120: sgill KviR dvtpl RS11_PEA : 134- 137: gcrap KkrR v RS11_PINTH : 54- 57: gacgf KgtR rgtpf RS11_PINTH : 126- 129: gcrpp KkrR v RS11_SPIOL : 20- 23: rissr KsaR kipkg RS11_SPIOL : 134- 137: gcrpp KkrR v RS11_SULAC : 44- 47: ggmvv KadR ekpsp RS11_THETH : 8- 11: kpskk KvkR qvasg RS11_TOBAC : 20- 23: rigsr KgaR ripkg RS11_TOBAC : 62- 65: gtsgf KgtR rgtpf RS11_TOBAC : 134- 137: gcrpp KkrR v RS14_ARATH : 58- 61: arsgm KigR iedvt RS14_ARATH : 76- 79: dstrr KggR rgrrl RS14_CHLRE : 65- 68: ggmkv KadR dessp RS14_CHLRE : 127- 130: aragm KigR iedvt RS14_CHLRE : 145- 148: dstrr KggR rgrrl RS14_DROME : 63- 66: ggmkv KadR deasp RS14_DROME : 125- 128: arssm KigR iedvt RS14_DROME : 143- 146: dstrr KggR rgrrl RS14_HUMAN : 63- 66: ggmkv KadR dessp RS14_HUMAN : 125- 128: arsgm KigR iedvt RS14_HUMAN : 143- 146: dstrr KggR rgrrl RS14_KLULA : 49- 52: ggmkv KadR dessp RS14_KLULA : 129- 132: dstrk KggR rgrrl RS14_NEUCR : 5- 8: mppk KaaR paqen RS14_NEUCR : 64- 67: ggikv KadR dessp RS14_NEUCR : 126- 129: arsgm KigR iedvt RS14_NEUCR : 144- 147: dstrr KggR rgrrl RS14_PODCA : 63- 66: ggmkv KadR dessp RS14_PODCA : 125- 128: arsgm KigR iedvt RS14_PODCA : 143- 146: dctrr KggR rgrrl RS14_RAT : 63- 66: ggmkv KadR dessp RS14_RAT : 125- 128: arsgm KigR iedvt RS14_RAT : 143- 146: dstrr KggR rgrrl RS14_TRYBB : 56- 59: ggmkv KadR dessp RS14_TRYBB : 118- 121: aragm KigR iedvt RS14_TRYBB : 136- 139: dstrr KgsR rgrrl RT11_ACACA : 19- 22: iisqk KvlR sklsk RT11_ACACA : 96- 99: kittk KkkR spdtl RT11_ACACA : 113- 116: sasva KiaR aknik RT11_ACACA : 169- 172: lmrkk KakR l RT11_MARPO : 49- 52: gsvgf KgsR rstny RT11_MARPO : 121- 124: gcrpp KkrR v RT11_PROWI : 52- 55: gtlgf KnsR kstvy RT11_PROWI : 124- 127: gcrpp KkrR v B 2: 7.8401 179( 33) A-x(3,4)-A Occurences: 179(33) R141_MAIZE : 29- 33: fvfgv Ahif-A sfndt R141_MAIZE : 71- 75: esspy Aaml-A aqdva R141_MAIZE : 71- 76: esspy AamlaA qdvaq R141_MAIZE : 72- 76: sspya Amla-A qdvaq R141_MAIZE : 75- 80: yaaml AaqdvA qrcke R141_MAIZE : 76- 80: aamla Aqdv-A qrcke R141_MAIZE : 113- 118: pgaqs AlralA rsgmk R141_YEAST : 16- 20: qvfgv Ariy-A sfndt R141_YEAST : 58- 62: esspy Aaml-A aqdva R141_YEAST : 58- 63: esspy AamlaA qdvaa R141_YEAST : 59- 63: sspya Amla-A qdvaa R141_YEAST : 62- 67: yaaml AaqdvA akcre R141_YEAST : 63- 67: aamla Aqdv-A akcre R141_YEAST : 63- 68: aamla AqdvaA kcrev R141_YEAST : 99- 103: gpggq Aalr-A larsg R141_YEAST : 100- 105: pggqa AlralA rsglr R142_MAIZE : 30- 34: hvfgv Ahif-A sfndt R142_MAIZE : 72- 76: esspy Aaml-A sqdva R142_MAIZE : 76- 81: yaaml AsqdvA qrcke R142_MAIZE : 114- 119: pgaqs AlralA rsgmk R142_YEAST : 17- 21: qvfgv Ariy-A sfndt R142_YEAST : 59- 63: esspy Aaml-A aqdva R142_YEAST : 59- 64: esspy AamlaA qdvaa R142_YEAST : 60- 64: sspya Amla-A qdvaa R142_YEAST : 63- 68: yaaml AaqdvA akcke R142_YEAST : 64- 68: aamla Aqdv-A akcke R142_YEAST : 64- 69: aamla AqdvaA kckev R142_YEAST : 100- 104: gpggq Aalr-A larsg R142_YEAST : 101- 106: pggqa AlralA rsglr RS11_BACST : 40- 44: dvhgn Alaw-A sagsl RS11_BACST : 42- 46: hgnal Awas-A gslgf RS11_BACST : 61- 65: kstpf Aaqm-A aeaaa RS11_BACST : 61- 66: kstpf AaqmaA eaaak RS11_BACST : 62- 66: stpfa Aqma-A eaaak RS11_BACST : 65- 69: faaqm Aaea-A akasm RS11_BACST : 65- 70: faaqm AaeaaA kasme RS11_BACST : 66- 70: aaqma Aeaa-A kasme RS11_BACST : 68- 72: qmaae Aaak-A smehg RS11_BACST : 90- 94: vkgpg Agre-A airal RS11_BACST : 90- 95: vkgpg AgreaA iralq RS11_BACST : 94- 98: gagre Aair-A lqaag RS11_BACST : 98- 102: eaair Alqa-A gleit RS11_BACSU : 64- 68: kstpf Aaqm-A aetaa RS11_BACSU : 64- 69: kstpf AaqmaA etaak RS11_BACSU : 65- 69: stpfa Aqma-A etaak RS11_BACSU : 68- 72: faaqm Aaet-A akgsi RS11_BACSU : 68- 73: faaqm AaetaA kgsie RS11_BACSU : 69- 73: aaqma Aeta-A kgsie RS11_BACSU : 97- 101: gsgre Aair-A lqaag RS11_BACSU : 101- 105: eaair Alqa-A glevt RS11_ECOLI : 3- 7: ak Apir-A rkrvr RS11_ECOLI : 20- 24: vsdgv Ahih-A sfnnt RS11_ECOLI : 40- 44: drqgn Algw-A taggs RS11_ECOLI : 61- 65: kstpf Aaqv-A aerca RS11_ECOLI : 61- 66: kstpf AaqvaA ercad RS11_ECOLI : 62- 66: stpfa Aqva-A ercad RS11_ECOLI : 65- 70: faaqv AaercA davke RS11_ECOLI : 66- 70: aaqva Aerc-A davke RS11_ECOLI : 98- 102: estir Alna-A gfrit RS11_EPIVI : 71- 75: rgtsf Aaqi-A atnai RS11_EPIVI : 71- 76: rgtsf AaqiaA tnair RS11_EPIVI : 72- 76: gtsfa Aqia-A tnair RS11_EPIVI : 75- 79: faaqi Aatn-A irivq RS11_EPIVI : 102- 106: gigrd Avlr-A irgsg RS11_EUGGR : 58- 62: ksskk Atpl-A tkttt RS11_EUGGR : 70- 74: tttai Avkk-A ieqgl RS11_HAEIN : 40- 44: drqgn Alaw-A taggs RS11_HAEIN : 42- 46: qgnal Awat-A ggsgf RS11_HAEIN : 61- 65: kstpf Aaqv-A aerca RS11_HAEIN : 61- 66: kstpf AaqvaA ercae RS11_HAEIN : 62- 66: stpfa Aqva-A ercae RS11_HAEIN : 65- 70: faaqv AaercA eivke RS11_HAEIN : 66- 70: aaqva Aerc-A eivke RS11_HAEIN : 98- 102: estir Alna-A gfrit RS11_HALMA : 11- 15: diwgi Ahvh-A sfnnt RS11_HALMA : 30- 34: tdqtg Aetl-A kssgg RS11_HALMA : 49- 53: qnrde Aspy-A amqma RS11_HALMA : 49- 54: qnrde AspyaA mqmae RS11_HALMA : 53- 58: easpy AamqmA evvae RS11_HALMA : 54- 58: aspya Amqm-A evvae RS11_HALMA : 58- 62: aamqm Aevv-A ekald RS11_HALMA : 94- 98: gpgaq Atir-A larag RS11_HALMA : 98- 102: qatir Alar-A gleig RS11_MAIZE : 75- 79: kssrk Aspy-A gqrta RS11_MAIZE : 79- 84: kaspy AgqrtA vdair RS11_MAIZE : 109- 113: gsgrd Aalr-A iaksg RS11_MAIZE : 110- 115: sgrda AlraiA ksgvr RS11_MARPO : 63- 67: kstpf Aaqt-A aenai RS11_MARPO : 63- 68: kstpf AaqtaA enair RS11_MARPO : 64- 68: stpfa Aqta-A enair RS11_MARPO : 67- 71: faaqt Aaen-A irili RS11_MYCBO : 4- 9: mpp AkkgpA tsark RS11_MYCBO : 72- 76: kstpf Aaql-A aenpa RS11_MYCBO : 72- 77: kstpf AaqlaA enpar RS11_MYCBO : 73- 77: stpfa Aqla-A enpar RS11_MYCBO : 76- 81: faaql AaenpA rkaqd RS11_MYCBO : 77- 81: aaqla Aenp-A rkaqd RS11_ORYSA : 75- 79: kssrk Aspy-A gqrta RS11_ORYSA : 79- 84: kaspy AgqrtA vdair RS11_ORYSA : 109- 113: gsgrd Aalr-A iaksg RS11_ORYSA : 110- 115: sgrda AlraiA ksgvr RS11_PEA : 71- 75: rgtpf Aaqt-A agnai RS11_PEA : 71- 76: rgtpf AaqtaA gnaiq RS11_PEA : 72- 76: gtpfa Aqta-A gnaiq RS11_PEA : 75- 79: faaqt Aagn-A iqtvv RS11_PEA : 104- 108: glgrd Aalr-A iyrsg RS11_PINTH : 63- 67: rgtpf Aaqt-A aenvi RS11_PINTH : 63- 68: rgtpf AaqtaA envir RS11_PINTH : 64- 68: gtpfa Aqta-A envir RS11_SPIOL : 71- 75: rgtpf Aaqt-A agnai RS11_SPIOL : 71- 76: rgtpf AaqtaA gnair RS11_SPIOL : 72- 76: gtpfa Aqta-A gnair RS11_SPIOL : 75- 79: faaqt Aagn-A irtvv RS11_SPIOL : 104- 108: slgrd Aalr-A irrsg RS11_SULAC : 12- 16: irwgn Ariy-A sqnnt RS11_SULAC : 54- 58: kpspy Aaml-A ankaa RS11_SULAC : 54- 59: kpspy AamlaA nkaan RS11_SULAC : 55- 59: pspya Amla-A nkaan RS11_SULAC : 58- 62: yaaml Aank-A andaf RS11_SULAC : 58- 63: yaaml AankaA ndafd RS11_SULAC : 59- 63: aamla Anka-A ndafd RS11_SULAC : 62- 66: laank Aand-A fdkgi RS11_SULAC : 96- 101: pgaqp AiralA ragfi RS11_SULAC : 99- 103: qpair Alar-A gfiig RS11_THETH : 14- 18: vkrqv Asgr-A yihas RS11_THETH : 18- 22: vasgr Ayih-A syn RS11_TOBAC : 71- 75: rgtpf Aaqt-A aanai RS11_TOBAC : 71- 76: rgtpf AaqtaA anair RS11_TOBAC : 72- 76: gtpfa Aqta-A anair RS11_TOBAC : 72- 77: gtpfa AqtaaA nairt RS11_TOBAC : 75- 79: faaqt Aaan-A irtvv RS11_TOBAC : 104- 108: glgrd Aalr-A irrsg RS14_ARATH : 6- 10: esspy Aaml-A aqdva RS14_ARATH : 6- 11: esspy AamlaA qdvaq RS14_ARATH : 7- 11: sspya Amla-A qdvaq RS14_ARATH : 10- 15: yaaml AaqdvA qrcke RS14_ARATH : 11- 15: aamla Aqdv-A qrcke RS14_CHLRE : 2- 6: m Apkk-A akgde RS14_CHLRE : 2- 7: m ApkkaA kgdea RS14_CHLRE : 7- 12: apkka AkgdeA pkevv RS14_CHLRE : 33- 37: hvfgv Ahif-A sfndt RS14_CHLRE : 75- 79: esspy Aaml-A aqdva RS14_CHLRE : 75- 80: esspy AamlaA qdvaq RS14_CHLRE : 76- 80: sspya Amla-A qdvaq RS14_CHLRE : 79- 84: yaaml AaqdvA qkcke RS14_CHLRE : 80- 84: aamla Aqdv-A qkcke RS14_CHLRE : 117- 122: pgaqs AlralA ragmk RS14_CHLRE : 120- 124: qsalr Alar-A gmkig RS14_DROME : 2- 6: m Aprk-A kvqke RS14_DROME : 31- 35: ivfgv Ahiy-A sfndt RS14_DROME : 64- 69: gmkvk AdrdeA spyaa RS14_DROME : 69- 73: adrde Aspy-A amlaa RS14_DROME : 69- 74: adrde AspyaA mlaaq RS14_DROME : 73- 77: easpy Aaml-A aqdva RS14_DROME : 73- 78: easpy AamlaA qdvae RS14_DROME : 74- 78: aspya Amla-A qdvae RS14_DROME : 77- 82: yaaml AaqdvA ekckt RS14_DROME : 78- 82: aamla Aqdv-A ekckt RS14_DROME : 115- 120: pgaqs AlralA rssmk RS14_HUMAN : 73- 77: esspy Aaml-A aqdva RS14_HUMAN : 73- 78: esspy AamlaA qdvaq RS14_HUMAN : 74- 78: sspya Amla-A qdvaq RS14_HUMAN : 77- 82: yaaml AaqdvA qrcke RS14_HUMAN : 78- 82: aamla Aqdv-A qrcke RS14_HUMAN : 115- 120: pgaqs AlralA rsgmk RS14_KLULA : 2- 7: m AnvvqA kdnsq RS14_KLULA : 17- 21: qvfgv Arif-A sfndt RS14_KLULA : 59- 63: esspy Aaml-A aqdva RS14_KLULA : 59- 64: esspy AamlaA qdvaa RS14_KLULA : 60- 64: sspya Amla-A qdvaa RS14_KLULA : 63- 68: yaaml AaqdvA akcke RS14_KLULA : 64- 68: aamla Aqdv-A akcke RS14_KLULA : 64- 69: aamla AqdvaA kckev RS14_KLULA : 100- 104: gpggq Aalr-A larsg RS14_KLULA : 101- 106: pggqa AlralA rsglr RS14_NEUCR : 6- 10: mppkk Aarp-A qenis RS14_NEUCR : 30- 34: lvfgv Arif-A sfndt RS14_NEUCR : 74- 78: esspy Aaml-A aqdva RS14_NEUCR : 74- 79: esspy AamlaA qdvaa RS14_NEUCR : 75- 79: sspya Amla-A qdvaa RS14_NEUCR : 78- 83: yaaml AaqdvA arcke RS14_NEUCR : 79- 83: aamla Aqdv-A arcke RS14_NEUCR : 79- 84: aamla AqdvaA rckel RS14_NEUCR : 116- 121: pgaqs AlralA rsgmk RS14_PODCA : 31- 35: nvfgv Ahif-A sfndt RS14_PODCA : 73- 77: esspy Aaml-A aqdva RS14_PODCA : 73- 78: esspy AamlaA qdvav RS14_PODCA : 74- 78: sspya Amla-A qdvav RS14_PODCA : 77- 82: yaaml AaqdvA vrcke RS14_PODCA : 78- 82: aamla Aqdv-A vrcke RS14_PODCA : 115- 120: pgaqs AlralA rsgmk RS14_RAT : 73- 77: esspy Aaml-A aqdva RS14_RAT : 73- 78: esspy AamlaA qdvaq RS14_RAT : 74- 78: sspya Amla-A qdvaq RS14_RAT : 77- 82: yaaml AaqdvA qrcke RS14_RAT : 78- 82: aamla Aqdv-A qrcke RS14_RAT : 115- 120: pgaqs AlralA rsgmk RS14_TRYBB : 66- 70: esspy Aamm-A aqdvv RS14_TRYBB : 66- 71: esspy AammaA qdvva RS14_TRYBB : 67- 71: sspya Amma-A qdvva RS14_TRYBB : 71- 76: aamma AqdvvA rckec RS14_TRYBB : 107- 111: gpgaq Aalr-A larag RS14_TRYBB : 108- 113: pgaqa AlralA ragmk RS14_TRYBB : 111- 115: qaalr Alar-A gmkig RT11_ACACA : 112- 117: vsasv AkiarA kniky RT11_MARPO : 58- 63: rstny AaqatA enaar RT11_MARPO : 59- 63: stnya Aqat-A enaar RT11_MARPO : 61- 66: nyaaq AtaenA arvai RT11_MARPO : 63- 67: aaqat Aena-A rvaiq RT11_MARPO : 66- 70: ataen Aarv-A iqlgf RT11_PROWI : 61- 65: kstvy Asga-A aeala RT11_PROWI : 61- 66: kstvy AsgaaA ealas RT11_PROWI : 64- 68: vyasg Aaae-A laska RT11_PROWI : 65- 70: yasga AaealA skafn RT11_PROWI : 66- 70: asgaa Aeal-A skafn RT11_PROWI : 68- 73: gaaae AlaskA fnegy C 3: 7.8401 155( 33) G-x(0,1)-R Occurences: 155(33) R141_MAIZE : 47- 48: vtdls G-R etlvr R141_MAIZE : 125- 126: sgmki G-R iedvt R141_MAIZE : 142- 144: strrk GgR rgrrl R141_MAIZE : 143- 144: trrkg G-R rgrrl R141_MAIZE : 143- 145: trrkg GrR grrl R141_MAIZE : 146- 147: kggrr G-R rl R141_MAIZE : 146- 148: kggrr GrR l R141_YEAST : 87- 89: iratg GtR tktpg R141_YEAST : 108- 110: alars GlR igrie R141_YEAST : 112- 113: sglri G-R iedvt R141_YEAST : 129- 131: strkk GgR rgrrl R141_YEAST : 130- 131: trkkg G-R rgrrl R141_YEAST : 130- 132: trkkg GrR grrl R141_YEAST : 133- 134: kggrr G-R rl R141_YEAST : 133- 135: kggrr GrR l R142_MAIZE : 3- 4: ms G-R kktre R142_MAIZE : 48- 49: vtdls G-R etlvr R142_MAIZE : 126- 127: sgmki G-R iedvt R142_MAIZE : 143- 145: strrk GgR rgrrl R142_MAIZE : 144- 145: trrkg G-R rgrrl R142_MAIZE : 144- 146: trrkg GrR grrl R142_MAIZE : 147- 148: kggrr G-R rl R142_MAIZE : 147- 149: kggrr GrR l R142_YEAST : 88- 90: iratg GtR tktpg R142_YEAST : 109- 111: alars GlR igrie R142_YEAST : 113- 114: sglri G-R iedvt R142_YEAST : 130- 132: strkk GgR rgrrl R142_YEAST : 131- 132: trkkg G-R rgrrl R142_YEAST : 131- 133: trkkg GrR grrl R142_YEAST : 134- 135: kggrr G-R rl R142_YEAST : 134- 136: kggrr GrR l RS11_BACST : 53- 55: slgfk GsR kstpf RS11_BACST : 91- 92: kgpga G-R eaair RS11_BACST : 119- 121: piphd GcR ppkrr RS11_BACSU : 53- 55: sagal GfR gsrks RS11_BACSU : 56- 58: algfr GsR kstpf RS11_BACSU : 94- 95: kgpgs G-R eaair RS11_BACSU : 122- 124: pvphn GcR ppkrr RS11_ECOLI : 50- 52: taggs GfR gsrks RS11_ECOLI : 53- 55: gsgfr GsR kstpf RS11_ECOLI : 91- 92: kgpgp G-R estir RS11_ECOLI : 103- 105: alnaa GfR itnit RS11_ECOLI : 119- 121: piphn GcR ppkkr RS11_EPIVI : 9- 11: aipit GsR rnvhv RS11_EPIVI : 17- 19: rnvhv GsR kssfr RS11_EPIVI : 48- 49: vtdik G-R vvsws RS11_EPIVI : 63- 65: tcgfk GtR rgtsf RS11_EPIVI : 99- 100: kgpgi G-R davlr RS11_EPIVI : 127- 129: pmphn GcR ppkkr RS11_EUGGR : 92- 93: sgpgt G-R etalk RS11_EUGGR : 104- 106: cvqsl GlR iscir RS11_EUGGR : 120- 122: plphn GcR pskrr RS11_HAEIN : 18- 20: kqvvd GvR hihas RS11_HAEIN : 50- 52: taggs GfR gsrks RS11_HAEIN : 53- 55: gsgfr GsR kstpf RS11_HAEIN : 91- 92: kgpgp G-R estir RS11_HAEIN : 103- 105: alnaa GfR itnit RS11_HAEIN : 119- 121: piphn GcR ppkkr RS11_HALMA : 107- 108: aglei G-R iedvt RS11_HALMA : 119- 121: ptphd GtR apkns RS11_MAIZE : 9- 11: aipki GsR kkvri RS11_MAIZE : 17- 19: kkvri GlR rnarf RS11_MAIZE : 56- 57: vtdpq G-R vvfws RS11_MAIZE : 80- 82: aspya GqR tavda RS11_MAIZE : 106- 107: kgags G-R daalr RS11_MAIZE : 118- 120: aiaks GvR lscir RS11_MAIZE : 134- 136: pmphn GcR ppkkr RS11_MARPO : 13- 15: inlrk GkR rlpkg RS11_MARPO : 93- 94: sgpgp G-R dtalr RS11_MARPO : 121- 123: pmphn GcR pprkr RS11_MYCBO : 64- 66: hvvfk GsR kstpf RS11_MYCBO : 88- 90: kaqdh GvR kvdvf RS11_MYCBO : 102- 103: kgpgs G-R enpdp RS11_MYCBO : 112- 113: dpvga G-R rswrw RS11_MYCBO : 112- 114: dpvga GrR swrwa RS11_ORYSA : 9- 11: aipki GsR rkvri RS11_ORYSA : 17- 19: rkvri GlR rnarf RS11_ORYSA : 56- 57: vtdpq G-R vvfws RS11_ORYSA : 80- 82: aspya GqR tavda RS11_ORYSA : 106- 107: kgags G-R daalr RS11_ORYSA : 118- 120: aiaks GvR lscir RS11_ORYSA : 134- 136: pmphn GcR ppkkr RS11_PEA : 9- 11: sipki GsR ktgri RS11_PEA : 14- 15: gsrkt G-R igsrk RS11_PEA : 17- 19: ktgri GsR khprk RS11_PEA : 48- 49: vtdvr G-R visws RS11_PEA : 63- 65: scgfk GtR rgtpf RS11_PEA : 101- 102: kgpgl G-R daalr RS11_PEA : 129- 131: plphn GcR apkkr RS11_PINTH : 9- 11: tikri GsR rnehr RS11_PINTH : 55- 57: acgfk GtR rgtpf RS11_PINTH : 91- 92: misgp G-R grdta RS11_PINTH : 93- 94: sgpgr G-R dtalr RS11_PINTH : 121- 123: pmphn GcR ppkkr RS11_SPIOL : 9- 11: pipki GsR rngri RS11_SPIOL : 14- 15: gsrrn G-R issrk RS11_SPIOL : 48- 49: vtdvr G-R vvswa RS11_SPIOL : 60- 62: sagtc GfR gtkrg RS11_SPIOL : 101- 102: kgpsl G-R daalr RS11_SPIOL : 129- 131: pmphn GcR ppkkr RS11_SULAC : 108- 109: agfii G-R iedvt RS11_SULAC : 125- 127: tirrp GgR rgrrv RS11_SULAC : 126- 127: irrpg G-R rgrrv RS11_SULAC : 126- 128: irrpg GrR grrv RS11_SULAC : 129- 130: pggrr G-R rv RS11_SULAC : 129- 131: pggrr GrR v RS11_THETH : 16- 17: rqvas G-R ayiha RS11_TOBAC : 14- 15: ssrrn G-R igsrk RS11_TOBAC : 17- 19: rngri GsR kgarr RS11_TOBAC : 21- 23: igsrk GaR ripkg RS11_TOBAC : 48- 49: vtdvr G-R vvsws RS11_TOBAC : 63- 65: tsgfk GtR rgtpf RS11_TOBAC : 101- 102: kgpgl G-R daalr RS11_TOBAC : 129- 131: pmphn GcR ppkkr RS14_ARATH : 60- 61: sgmki G-R iedvt RS14_ARATH : 77- 79: strrk GgR rgrrl RS14_ARATH : 78- 79: trrkg G-R rgrrl RS14_ARATH : 78- 80: trrkg GrR grrl RS14_ARATH : 81- 82: kggrr G-R rl RS14_ARATH : 81- 83: kggrr GrR l RS14_CHLRE : 51- 52: vtdls G-R etisr RS14_CHLRE : 104- 106: lratg GnR tktpg RS14_CHLRE : 129- 130: agmki G-R iedvt RS14_CHLRE : 146- 148: strrk GgR rgrrl RS14_CHLRE : 147- 148: trrkg G-R rgrrl RS14_CHLRE : 147- 149: trrkg GrR grrl RS14_CHLRE : 150- 151: kggrr G-R rl RS14_CHLRE : 150- 152: kggrr GrR l RS14_DROME : 49- 50: vtdls G-R etiar RS14_DROME : 127- 128: ssmki G-R iedvt RS14_DROME : 144- 146: strrk GgR rgrrl RS14_DROME : 145- 146: trrkg G-R rgrrl RS14_DROME : 145- 147: trrkg GrR grrl RS14_DROME : 148- 149: kggrr G-R rl RS14_DROME : 148- 150: kggrr GrR l RS14_HUMAN : 102- 104: lratg GnR tktpg RS14_HUMAN : 127- 128: sgmki G-R iedvt RS14_HUMAN : 144- 146: strrk GgR rgrrl RS14_HUMAN : 145- 146: trrkg G-R rgrrl RS14_HUMAN : 145- 147: trrkg GrR grrl RS14_HUMAN : 148- 149: kggrr G-R rl RS14_HUMAN : 148- 150: kggrr GrR l RS14_KLULA : 35- 36: vtdls G-R etiar RS14_KLULA : 88- 90: iratg GtR sktpg RS14_KLULA : 109- 111: alars GlR igrie RS14_KLULA : 113- 114: sglri G-R iedvt RS14_KLULA : 130- 132: strkk GgR rgrrl RS14_KLULA : 131- 132: trkkg G-R rgrrl RS14_KLULA : 131- 133: trkkg GrR grrl RS14_KLULA : 134- 135: kggrr G-R rl RS14_KLULA : 134- 136: kggrr GrR l RS14_NEUCR : 50- 51: dlsss G-R ettdr RS14_NEUCR : 105- 107: atggn GtR tpgpg RS14_NEUCR : 128- 129: sgmki G-R iedvt RS14_NEUCR : 145- 147: strrk GgR rgrrl RS14_NEUCR : 146- 147: trrkg G-R rgrrl RS14_NEUCR : 146- 148: trrkg GrR grrl RS14_NEUCR : 149- 150: kggrr G-R rl RS14_NEUCR : 149- 151: kggrr GrR l RS14_PODCA : 102- 104: lratg GnR tktpg RS14_PODCA : 127- 128: sgmki G-R iedvt RS14_PODCA : 144- 146: ctrrk GgR rgrrl RS14_PODCA : 145- 146: trrkg G-R rgrrl RS14_PODCA : 145- 147: trrkg GrR grrl RS14_PODCA : 148- 149: kggrr G-R rl RS14_PODCA : 148- 150: kggrr GrR l RS14_RAT : 102- 104: lratg GnR tktpg RS14_RAT : 127- 128: sgmki G-R iedvt RS14_RAT : 144- 146: strrk GgR rgrrl RS14_RAT : 145- 146: trrkg G-R rgrrl RS14_RAT : 145- 147: trrkg GrR grrl RS14_RAT : 148- 149: kggrr G-R rl RS14_RAT : 148- 150: kggrr GrR l RS14_TRYBB : 42- 43: vtdms G-R etfck RS14_TRYBB : 120- 121: agmki G-R iedvt RS14_TRYBB : 137- 139: strrk GsR rgrrl RS14_TRYBB : 141- 142: kgsrr G-R rl RS14_TRYBB : 141- 143: kgsrr GrR l RT11_ACACA : 79- 80: itdvi G-R vvvsq RT11_MARPO : 50- 52: svgfk GsR rstny RT11_MARPO : 116- 118: ptphn GcR ppkkr RT11_PROWI : 77- 79: kafne GyR tiivk RT11_PROWI : 119- 121: piahn GcR ppkkr D 4: 7.8401 84( 33) S-x(0,1)-G Occurences: 84(33) R141_MAIZE : 46- 47: hvtdl S-G retlv R141_MAIZE : 120- 121: ralar S-G mkigr R141_YEAST : 33- 34: hvtdl S-G ketia R141_YEAST : 107- 108: ralar S-G lrigr R142_MAIZE : 2- 3: m S-G rkktr R142_MAIZE : 47- 48: hvtdl S-G retlv R142_MAIZE : 121- 122: ralar S-G mkigr R142_YEAST : 34- 35: hvtdl S-G ketia R142_YEAST : 108- 109: ralar S-G lrigr RS11_BACST : 45- 47: alawa SaG slgfk RS11_BACST : 48- 50: wasag SlG fkgsr RS11_BACSU : 20- 21: kknie S-G iahir RS11_BACSU : 48- 50: aisws SaG algfr RS11_BACSU : 93- 94: vkgpg S-G reaai RS11_ECOLI : 16- 18: vrkqv SdG vahih RS11_ECOLI : 49- 50: atagg S-G frgsr RS11_EPIVI : 55- 57: vvsws SaG tcgfk RS11_EPIVI : 110- 111: rairg S-G vlltf RS11_EUGGR : 46- 48: viaws SsG acgfk RS11_EUGGR : 47- 48: iawss S-G acgfk RS11_EUGGR : 87- 88: veini S-G pgtgr RS11_EUGGR : 102- 104: lkcvq SlG lrisc RS11_HAEIN : 49- 50: atagg S-G frgsr RS11_HALMA : 36- 38: etlak SsG gtvvk RS11_HALMA : 37- 38: tlaks S-G gtvvk RS11_HALMA : 37- 39: tlaks SgG tvvkq RS11_HALMA : 87- 89: gnlqt SpG pgaqa RS11_HALMA : 126- 127: rapkn S-G f RS11_MAIZE : 63- 65: vvfws SaG tcgfk RS11_MAIZE : 105- 106: vkgag S-G rdaal RS11_MAIZE : 117- 118: raiak S-G vrlsc RS11_MARPO : 47- 49: vvsws SaG acgfk RS11_MARPO : 88- 89: aevmi S-G pgpgr RS11_MARPO : 104- 105: rairr S-G iilsf RS11_MYCBO : 56- 58: vigwa SsG hvvfk RS11_MYCBO : 57- 58: igwas S-G hvvfk RS11_MYCBO : 101- 102: vkgpg S-G renpd RS11_MYCBO : 132- 133: tritv S-G ppnhr RS11_ORYSA : 63- 65: vvfws SaG tcgfk RS11_ORYSA : 105- 106: vkgag S-G rdaal RS11_ORYSA : 117- 118: raiak S-G vrlsc RS11_PEA : 55- 57: visws SaG scgfk RS11_PEA : 58- 60: wssag ScG fkgtr RS11_PEA : 112- 113: raiyr S-G illkv RS11_PINTH : 47- 49: vlsws SaG acgfk RS11_PINTH : 88- 89: vevmi S-G pgrgr RS11_PINTH : 104- 105: rtirr S-G illsf RS11_SPIOL : 55- 57: vvswa SaG tcgfr RS11_SPIOL : 99- 101: mikgp SlG rdaal RS11_SPIOL : 112- 113: rairr S-G illsf RS11_SULAC : 38- 39: iiska S-G gmvvk RS11_SULAC : 38- 40: iiska SgG mvvka RS11_THETH : 15- 16: krqva S-G rayih RS11_TOBAC : 55- 57: vvsws SaG tsgfk RS11_TOBAC : 59- 60: ssagt S-G fkgtr RS11_TOBAC : 112- 113: rairr S-G illtf RS14_ARATH : 55- 56: ralar S-G mkigr RS14_CHLRE : 18- 20: pkevv SlG ptvre RS14_CHLRE : 50- 51: hvtdl S-G retis RS14_DROME : 48- 49: hvtdl S-G retia RS14_HUMAN : 16- 18: eeqvi SlG pqvae RS14_HUMAN : 48- 49: hvtdl S-G ketic RS14_HUMAN : 122- 123: ralar S-G mkigr RS14_KLULA : 34- 35: hvtdl S-G retia RS14_KLULA : 108- 109: ralar S-G lrigr RS14_NEUCR : 15- 17: aqeni SlG pqire RS14_NEUCR : 48- 50: vtdls SsG rettd RS14_NEUCR : 49- 50: tdlss S-G rettd RS14_NEUCR : 123- 124: ralar S-G mkigr RS14_PODCA : 16- 18: eeqvi SlG pqvad RS14_PODCA : 48- 49: hvtdl S-G ketia RS14_PODCA : 122- 123: ralar S-G mkigr RS14_RAT : 16- 18: eeqvi SlG pqvae RS14_RAT : 48- 49: hvtdl S-G ketic RS14_RAT : 122- 123: ralar S-G mkigr RS14_TRYBB : 13- 15: kyygs SaG kdqlv RS14_TRYBB : 41- 42: hvtdm S-G retfc RS14_TRYBB : 100- 102: gvgtk SpG pgaqa RT11_ACACA : 86- 88: vvvsq SaG sckit RT11_ACACA : 160- 162: vvknk ShG llmrk RT11_MARPO : 42- 44: tktws SsG svgfk RT11_MARPO : 43- 44: ktwss S-G svgfk RT11_MARPO : 45- 47: wsssg SvG fkgsr RT11_PROWI : 17- 18: fiekk S-G ivhiq RT11_PROWI : 45- 47: tqffv SaG tlgfk RT11_PROWI : 62- 63: stvya S-G aaaea E 5: 7.8401 83( 33) S-x(2,3)-A Occurences: 83(33) R141_MAIZE : 67- 71: adrde SspyA amlaa R141_MAIZE : 68- 71: drdes Spy-A amlaa R141_MAIZE : 68- 72: drdes SpyaA mlaaq R141_MAIZE : 112- 116: gpgaq SalrA larsg R141_YEAST : 54- 58: adrde SspyA amlaa R141_YEAST : 55- 58: drdes Spy-A amlaa R141_YEAST : 55- 59: drdes SpyaA mlaaq R142_MAIZE : 68- 72: adrde SspyA amlas R142_MAIZE : 69- 72: drdes Spy-A amlas R142_MAIZE : 69- 73: drdes SpyaA mlasq R142_MAIZE : 77- 81: aamla SqdvA qrcke R142_MAIZE : 113- 117: gpgaq SalrA larsg R142_YEAST : 55- 59: adrde SspyA amlaa R142_YEAST : 56- 59: drdes Spy-A amlaa R142_YEAST : 56- 60: drdes SpyaA mlaaq RS11_BACST : 57- 61: kgsrk StpfA aqmaa RS11_BACSU : 20- 23: kknie Sgi-A hirst RS11_BACSU : 45- 49: hgnai SwssA galgf RS11_BACSU : 47- 51: naisw SsagA lgfrg RS11_BACSU : 48- 51: aisws Sag-A lgfrg RS11_BACSU : 60- 64: rgsrk StpfA aqmaa RS11_BACSU : 93- 97: vkgpg SgreA airal RS11_ECOLI : 16- 20: vrkqv SdgvA hihas RS11_ECOLI : 57- 61: rgsrk StpfA aqvaa RS11_ECOLI : 94- 98: gpgre StirA lnaag RS11_EPIVI : 52- 56: kgrvv SwssA gtcgf RS11_EPIVI : 69- 72: trrgt Sfa-A qiaat RS11_EUGGR : 45- 49: nviaw SssgA cgfks RS11_EUGGR : 46- 49: viaws Ssg-A cgfks RS11_EUGGR : 54- 58: acgfk SskkA tplat RS11_EUGGR : 55- 58: cgfks Skk-A tplat RS11_HAEIN : 57- 61: rgsrk StpfA aqvaa RS11_HAEIN : 94- 98: gpgre StirA lnaag RS11_HALMA : 50- 53: nrdea Spy-A amqma RS11_HALMA : 50- 54: nrdea SpyaA mqmae RS11_MAIZE : 71- 75: tcgfk SsrkA spyag RS11_MAIZE : 72- 75: cgfks Srk-A spyag RS11_MAIZE : 76- 79: ssrka Spy-A gqrta RS11_MAIZE : 105- 109: vkgag SgrdA alrai RS11_MARPO : 44- 48: rgqvv SwssA gacgf RS11_MARPO : 46- 50: qvvsw SsagA cgfkg RS11_MARPO : 47- 50: vvsws Sag-A cgfkg RS11_MARPO : 59- 63: kgtkk StpfA aqtaa RS11_MYCBO : 68- 72: kgsrk StpfA aqlaa RS11_MYCBO : 115- 119: gagrr SwrwA rsrms RS11_ORYSA : 71- 75: tcgfk SsrkA spyag RS11_ORYSA : 72- 75: cgfks Srk-A spyag RS11_ORYSA : 76- 79: ssrka Spy-A gqrta RS11_ORYSA : 105- 109: vkgag SgrdA alrai RS11_PEA : 52- 56: rgrvi SwssA gscgf RS11_PINTH : 44- 48: rgqvl SwssA gacgf RS11_PINTH : 46- 50: qvlsw SsagA cgfkg RS11_PINTH : 47- 50: vlsws Sag-A cgfkg RS11_SPIOL : 18- 22: ngris SrksA rkipk RS11_SPIOL : 52- 56: rgrvv SwasA gtcgf RS11_SULAC : 51- 54: drekp Spy-A amlaa RS11_SULAC : 51- 55: drekp SpyaA mlaan RS11_THETH : 15- 18: krqva Sgr-A yihas RS11_TOBAC : 18- 22: ngrig SrkgA rripk RS11_TOBAC : 52- 56: rgrvv SwssA gtsgf RS14_ARATH : 2- 6: e SspyA amlaa RS14_ARATH : 3- 6: es Spy-A amlaa RS14_ARATH : 3- 7: es SpyaA mlaaq RS14_ARATH : 47- 51: gpgaq StlrA larsg RS14_CHLRE : 71- 75: adrde SspyA amlaa RS14_CHLRE : 72- 75: drdes Spy-A amlaa RS14_CHLRE : 72- 76: drdes SpyaA mlaaq RS14_CHLRE : 116- 120: gpgaq SalrA larag RS14_DROME : 70- 73: drdea Spy-A amlaa RS14_DROME : 70- 74: drdea SpyaA mlaaq RS14_DROME : 114- 118: gpgaq SalrA larss RS14_HUMAN : 69- 73: adrde SspyA amlaa RS14_HUMAN : 70- 73: drdes Spy-A amlaa RS14_HUMAN : 70- 74: drdes SpyaA mlaaq RS14_HUMAN : 114- 118: gpgaq SalrA larsg RS14_KLULA : 55- 59: adrde SspyA amlaa RS14_KLULA : 56- 59: drdes Spy-A amlaa RS14_KLULA : 56- 60: drdes SpyaA mlaaq RS14_NEUCR : 70- 74: adrde SspyA amlaa RS14_NEUCR : 71- 74: drdes Spy-A amlaa RS14_NEUCR : 71- 75: drdes SpyaA mlaaq RS14_NEUCR : 115- 119: gpgaq SalrA larsg RS14_PODCA : 69- 73: adrde SspyA amlaa RS14_PODCA : 70- 73: drdes Spy-A amlaa RS14_PODCA : 70- 74: drdes SpyaA mlaaq RS14_PODCA : 114- 118: gpgaq SalrA larsg RS14_RAT : 69- 73: adrde SspyA amlaa RS14_RAT : 70- 73: drdes Spy-A amlaa RS14_RAT : 70- 74: drdes SpyaA mlaaq RS14_RAT : 114- 118: gpgaq SalrA larsg RS14_TRYBB : 62- 66: adrde SspyA ammaa RS14_TRYBB : 63- 66: drdes Spy-A ammaa RS14_TRYBB : 63- 67: drdes SpyaA mmaaq RT11_ACACA : 84- 87: grvvv Sqs-A gscki RT11_ACACA : 108- 112: tlktv SasvA kiara RT11_MARPO : 54- 58: kgsrr StnyA aqata RT11_PROWI : 57- 61: knsrk StvyA sgaaa RT11_PROWI : 62- 65: stvya Sga-A aeala RT11_PROWI : 62- 66: stvya SgaaA ealas F 6: 7.8401 103( 33) K-x(2,3)-R Occurences: 103(33) R141_MAIZE : 61- 64: ggmkv Kad-R dessp R141_MAIZE : 123- 126: arsgm Kig-R iedvt R141_MAIZE : 141- 144: dstrr Kgg-R rgrrl R141_MAIZE : 141- 145: dstrr KggrR grrl R141_YEAST : 48- 51: ggmkv Kad-R dessp R141_YEAST : 127- 131: cdstr KkggR rgrrl R141_YEAST : 128- 131: dstrk Kgg-R rgrrl R141_YEAST : 128- 132: dstrk KggrR grrl R142_MAIZE : 5- 8: msgr Kkt-R epkee R142_MAIZE : 62- 65: ggmkv Kad-R dessp R142_MAIZE : 124- 127: arsgm Kig-R iedvt R142_MAIZE : 142- 145: dstrr Kgg-R rgrrl R142_MAIZE : 142- 146: dstrr KggrR grrl R142_YEAST : 49- 52: ggmkv Kad-R dessp R142_YEAST : 128- 132: sdstr KkggR rgrrl R142_YEAST : 129- 132: dstrk Kgg-R rgrrl R142_YEAST : 129- 133: dstrk KggrR grrl RS11_BACST : 8- 12: rtntr KrrvR knidt RS11_BACST : 52- 55: gslgf Kgs-R kstpf RS11_BACST : 124- 127: gcrpp Krr-R v RS11_BACSU : 6- 10: maaar KsntR krrvk RS11_BACSU : 127- 130: gcrpp Krr-R v RS11_ECOLI : 2- 6: a KapiR arkrv RS11_ECOLI : 9- 12: pirar Krv-R kqvsd RS11_ECOLI : 124- 127: gcrpp Kkr-R v RS11_EPIVI : 20- 24: hvgsr KssfR iqkgv RS11_EPIVI : 62- 65: gtcgf Kgt-R rgtsf RS11_EPIVI : 62- 66: gtcgf KgtrR gtsfa RS11_EPIVI : 132- 135: gcrpp Kkr-R v RS11_EUGGR : 125- 128: gcrps Krr-R i RS11_HAEIN : 2- 6: a KtpvR arkrv RS11_HAEIN : 124- 127: gcrpp Kkr-R v RS11_HALMA : 43- 46: ggtvv Kqn-R deasp RS11_HALMA : 64- 68: evvae KaldR gvegv RS11_MAIZE : 7- 11: tkaip KigsR kkvri RS11_MAIZE : 12- 15: kigsr Kkv-R iglrr RS11_MAIZE : 28- 31: rfslr Ksa-R ritkg RS11_MAIZE : 28- 32: rfslr KsarR itkgi RS11_MAIZE : 70- 73: gtcgf Kss-R kaspy RS11_MAIZE : 116- 120: lraia KsgvR lscir RS11_MAIZE : 139- 142: gcrpp Kkr-R l RS11_MARPO : 7- 11: pksvk KinlR kgkrr RS11_MARPO : 12- 15: kinlr Kgk-R rlpkg RS11_MARPO : 12- 16: kinlr KgkrR lpkgv RS11_MYCBO : 17- 20: arkgq Ktr-R rekkn RS11_MYCBO : 17- 21: arkgq KtrrR ekknv RS11_MYCBO : 63- 66: ghvvf Kgs-R kstpf RS11_ORYSA : 7- 11: tkaip KigsR rkvri RS11_ORYSA : 28- 31: rfslr Ksa-R ritkg RS11_ORYSA : 28- 32: rfslr KsarR itkgv RS11_ORYSA : 70- 73: gtcgf Kss-R kaspy RS11_ORYSA : 116- 120: lraia KsgvR lscir RS11_ORYSA : 139- 142: gcrpp Kkr-R l RS11_PEA : 7- 11: aksip KigsR ktgri RS11_PEA : 12- 15: kigsr Ktg-R igsrk RS11_PEA : 20- 23: rigsr Khp-R kipkg RS11_PEA : 62- 65: gscgf Kgt-R rgtpf RS11_PEA : 62- 66: gscgf KgtrR gtpfa RS11_PEA : 117- 120: sgill Kvi-R dvtpl RS11_PEA : 134- 137: gcrap Kkr-R v RS11_PINTH : 3- 7: ms KtikR igsrr RS11_PINTH : 54- 57: gacgf Kgt-R rgtpf RS11_PINTH : 54- 58: gacgf KgtrR gtpfa RS11_PINTH : 126- 129: gcrpp Kkr-R v RS11_SPIOL : 7- 11: akpip KigsR rngri RS11_SPIOL : 20- 23: rissr Ksa-R kipkg RS11_SPIOL : 134- 137: gcrpp Kkr-R v RS11_SULAC : 44- 47: ggmvv Kad-R ekpsp RS11_THETH : 7- 11: kkpsk KkvkR qvasg RS11_THETH : 8- 11: kpskk Kvk-R qvasg RS11_TOBAC : 7- 11: akaip KissR rngri RS11_TOBAC : 20- 23: rigsr Kga-R ripkg RS11_TOBAC : 20- 24: rigsr KgarR ipkgv RS11_TOBAC : 62- 65: gtsgf Kgt-R rgtpf RS11_TOBAC : 62- 66: gtsgf KgtrR gtpfa RS11_TOBAC : 134- 137: gcrpp Kkr-R v RS14_ARATH : 58- 61: arsgm Kig-R iedvt RS14_ARATH : 76- 79: dstrr Kgg-R rgrrl RS14_ARATH : 76- 80: dstrr KggrR grrl RS14_CHLRE : 65- 68: ggmkv Kad-R dessp RS14_CHLRE : 127- 130: aragm Kig-R iedvt RS14_CHLRE : 145- 148: dstrr Kgg-R rgrrl RS14_CHLRE : 145- 149: dstrr KggrR grrl RS14_DROME : 63- 66: ggmkv Kad-R deasp RS14_DROME : 125- 128: arssm Kig-R iedvt RS14_DROME : 143- 146: dstrr Kgg-R rgrrl RS14_DROME : 143- 147: dstrr KggrR grrl RS14_HUMAN : 63- 66: ggmkv Kad-R dessp RS14_HUMAN : 125- 128: arsgm Kig-R iedvt RS14_HUMAN : 143- 146: dstrr Kgg-R rgrrl RS14_HUMAN : 143- 147: dstrr KggrR grrl RS14_KLULA : 49- 52: ggmkv Kad-R dessp RS14_KLULA : 128- 132: sdstr KkggR rgrrl RS14_KLULA : 129- 132: dstrk Kgg-R rgrrl RS14_KLULA : 129- 133: dstrk KggrR grrl RS14_NEUCR : 4- 8: mpp KkaaR paqen RS14_NEUCR : 5- 8: mppk Kaa-R paqen RS14_NEUCR : 64- 67: ggikv Kad-R dessp RS14_NEUCR : 126- 129: arsgm Kig-R iedvt RS14_NEUCR : 144- 147: dstrr Kgg-R rgrrl RS14_NEUCR : 144- 148: dstrr KggrR grrl RS14_PODCA : 63- 66: ggmkv Kad-R dessp RS14_PODCA : 125- 128: arsgm Kig-R iedvt RS14_PODCA : 143- 146: dctrr Kgg-R rgrrl RS14_PODCA : 143- 147: dctrr KggrR grrl RS14_RAT : 63- 66: ggmkv Kad-R dessp RS14_RAT : 125- 128: arsgm Kig-R iedvt RS14_RAT : 143- 146: dstrr Kgg-R rgrrl RS14_RAT : 143- 147: dstrr KggrR grrl RS14_TRYBB : 56- 59: ggmkv Kad-R dessp RS14_TRYBB : 118- 121: aragm Kig-R iedvt RS14_TRYBB : 136- 139: dstrr Kgs-R rgrrl RS14_TRYBB : 136- 140: dstrr KgsrR grrl RT11_ACACA : 18- 22: riisq KkvlR sklsk RT11_ACACA : 19- 22: iisqk Kvl-R sklsk RT11_ACACA : 95- 99: ckitt KkkkR spdtl RT11_ACACA : 96- 99: kittk Kkk-R spdtl RT11_ACACA : 113- 116: sasva Kia-R aknik RT11_ACACA : 168- 172: llmrk KkakR l RT11_ACACA : 169- 172: lmrkk Kak-R l RT11_MARPO : 49- 52: gsvgf Kgs-R rstny RT11_MARPO : 49- 53: gsvgf KgsrR stnya RT11_MARPO : 121- 124: gcrpp Kkr-R v RT11_PROWI : 52- 55: gtlgf Kns-R kstvy RT11_PROWI : 93- 97: lgygk KsaiR glqks RT11_PROWI : 124- 127: gcrpp Kkr-R v G 7: 7.8401 76( 33) A-x(4,5)-K Occurences: 76(33) R141_MAIZE : 97- 102: hiklr Atggn-K tktpg R141_MAIZE : 118- 123: alral Arsgm-K igrie R141_YEAST : 63- 69: aamla AqdvaaK crevg R142_MAIZE : 98- 103: hiklr Atggn-K tktpg R142_MAIZE : 119- 124: alral Arsgm-K igrie R142_YEAST : 64- 70: aamla AqdvaaK ckevg RS11_BACST : 46- 52: lawas AgslgfK gsrks RS11_BACST : 65- 71: faaqm AaeaaaK asmeh RS11_BACST : 66- 71: aaqma Aeaaa-K asmeh RS11_BACSU : 68- 74: faaqm AaetaaK gsieh RS11_BACSU : 69- 74: aaqma Aetaa-K gsieh RS11_ECOLI : 3- 9: ak ApirarK rvrkq RS11_ECOLI : 7- 13: kapir ArkrvrK qvsdg RS11_EPIVI : 42- 47: nntiv Avtdi-K grvvs RS11_EPIVI : 56- 62: vswss AgtcgfK gtrrg RS11_EPIVI : 89- 94: qgmqr Aevmi-K gpgig RS11_EUGGR : 58- 64: ksskk AtplatK tttai RS11_EUGGR : 68- 73: tkttt Aiavk-K aieqg RS11_HAEIN : 7- 12: ktpvr Arkrv-K kqvvd RS11_HAEIN : 7- 13: ktpvr ArkrvkK qvvdg RS11_HALMA : 30- 35: tdqtg Aetla-K ssggt RS11_HALMA : 58- 64: aamqm AevvaeK aldrg RS11_MAIZE : 22- 28: glrrn ArfslrK sarri RS11_MAIZE : 30- 35: slrks Arrit-K giihv RS11_MAIZE : 64- 70: vfwss AgtcgfK ssrka RS11_MAIZE : 96- 101: vglqr Aevmv-K gagsg RS11_MAIZE : 110- 116: sgrda AlraiaK sgvrl RS11_MARPO : 48- 54: vswss AgacgfK gtkks RS11_MYCBO : 9- 14: akkgp Atsar-K gqktr RS11_MYCBO : 12- 17: gpats Arkgq-K trrre RS11_MYCBO : 77- 83: aaqla AenparK aqdhg RS11_ORYSA : 22- 28: glrrn ArfslrK sarri RS11_ORYSA : 30- 35: slrks Arrit-K gvihv RS11_ORYSA : 64- 70: vfwss AgtcgfK ssrka RS11_ORYSA : 96- 101: vglqr Aevmv-K gagsg RS11_ORYSA : 110- 116: sgrda AlraiaK sgvrl RS11_PEA : 2- 7: m Aksip-K igsrk RS11_PEA : 56- 62: iswss AgscgfK gtrrg RS11_PEA : 91- 96: qgmqr Aevri-K gpglg RS11_PINTH : 48- 54: lswss AgacgfK gtrrg RS11_SPIOL : 2- 7: m Akpip-K igsrr RS11_SPIOL : 22- 27: ssrks Arkip-K gvihv RS11_SPIOL : 91- 96: qgmqr Aevmi-K gpslg RS11_SULAC : 31- 36: tditg Aeiis-K asggm RS11_SULAC : 55- 61: pspya AmlaanK aanda RS11_SULAC : 63- 69: aanka AndafdK gisai RS11_THETH : 1- 6: Akkps-K kkvkr RS11_THETH : 1- 7: AkkpskK kvkrq RS11_TOBAC : 2- 7: m Akaip-K issrr RS11_TOBAC : 22- 27: gsrkg Arrip-K gvihv RS11_TOBAC : 56- 62: vswss AgtsgfK gtrrg RS11_TOBAC : 91- 96: qgmqr Aevmi-K gpglg RS14_ARATH : 32- 37: hvklr Atggn-K tktpg RS14_ARATH : 53- 58: tlral Arsgm-K igrie RS14_CHLRE : 2- 8: m ApkkaaK gdeap RS14_CHLRE : 80- 86: aamla AqdvaqK ckelg RS14_CHLRE : 122- 127: alral Aragm-K igrie RS14_DROME : 2- 7: m Aprka-K vqkee RS14_DROME : 78- 84: aamla AqdvaeK cktlg RS14_DROME : 99- 104: hiklr Atggn-K tktpg RS14_DROME : 120- 125: alral Arssm-K igrie RS14_HUMAN : 2- 7: m Aprkg-K ekkee RS14_HUMAN : 120- 125: alral Arsgm-K igrie RS14_KLULA : 2- 8: m AnvvqaK dnsqv RS14_KLULA : 64- 70: aamla AqdvaaK ckevg RS14_NEUCR : 121- 126: alral Arsgm-K igrie RS14_PODCA : 2- 7: m Aprkg-K apkee RS14_PODCA : 120- 125: alral Arsgm-K igrie RS14_RAT : 2- 7: m Aprkg-K dkkee RS14_RAT : 120- 125: alral Arsgm-K igrie RS14_TRYBB : 113- 118: alral Aragm-K igrie RT11_ACACA : 50- 56: qrlvl AkknpnK kryyl RT11_ACACA : 112- 118: vsasv AkiaraK nikyl RT11_ACACA : 115- 121: svaki ArakniK ylfkf RT11_MARPO : 70- 76: naarv AiqlgfK fvevr RT11_PROWI : 46- 52: qffvs AgtlgfK nsrks RT11_PROWI : 66- 72: asgaa AealasK afneg RT11_PROWI : 95- 101: ygkks AirglqK snlvi H 8: 7.3401 96( 33) R-x(1,3)-V Occurences: 96(33) R141_MAIZE : 48- 52: tdlsg RetlV ritgg R141_MAIZE : 126- 130: gmkig RiedV tpvpt R141_YEAST : 71- 73: vaakc Re--V gitav R141_YEAST : 113- 117: glrig RiedV tpvpc R142_MAIZE : 49- 53: tdlsg RetlV ritgg R142_MAIZE : 127- 131: gmkig RiedV tpvpt R142_YEAST : 114- 118: glrig RiedV tpvps RS11_BACST : 7- 11: rrtnt RkrrV rknid RS11_BACST : 9- 11: tntrk Rr--V rknid RS11_BACST : 125- 128: crppk Rrr-V RS11_BACST : 126- 128: rppkr Rr--V RS11_BACSU : 10- 14: rksnt RkrrV kknie RS11_BACSU : 12- 14: sntrk Rr--V kknie RS11_BACSU : 113- 115: evtai Rd--V tpvph RS11_BACSU : 128- 131: crppk Rrr-V RS11_BACSU : 129- 131: rppkr Rr--V RS11_ECOLI : 8- 11: apira Rkr-V rkqvs RS11_ECOLI : 12- 15: arkrv Rkq-V sdgva RS11_ECOLI : 126- 128: rppkk Rr--V RS11_EPIVI : 11- 14: pitgs Rrn-V hvgsr RS11_EPIVI : 12- 14: itgsr Rn--V hvgsr RS11_EPIVI : 12- 16: itgsr RnvhV gsrks RS11_EPIVI : 49- 51: tdikg Rv--V swssa RS11_EPIVI : 81- 83: atnai Ri--V qgmqr RS11_EPIVI : 88- 91: vqgmq Rae-V mikgp RS11_EPIVI : 100- 103: gpgig Rda-V lrair RS11_EPIVI : 108- 112: vlrai RgsgV lltfv RS11_EPIVI : 118- 120: lltfv Rd--V tpmph RS11_EPIVI : 134- 136: rppkk Rr--V RS11_EUGGR : 111- 113: risci Rd--V tplph RS11_HAEIN : 8- 11: tpvra Rkr-V kkqvv RS11_HAEIN : 126- 128: rppkk Rr--V RS11_HALMA : 68- 70: ekald Rg--V egvdv RS11_HALMA : 108- 112: gleig RiedV tptph RS11_MAIZE : 11- 14: pkigs Rkk-V riglr RS11_MAIZE : 57- 59: tdpqg Rv--V fwssa RS11_MAIZE : 82- 85: pyagq Rta-V dairt RS11_MAIZE : 89- 91: avdai Rt--V glqra RS11_MAIZE : 95- 98: tvglq Rae-V mvkga RS11_MAIZE : 125- 127: rlsci Rd--V tpmph RS11_MARPO : 39- 42: tvtdi Rgq-V vswss RS11_MARPO : 39- 43: tvtdi RgqvV swssa RS11_MARPO : 112- 114: ilsfv Rd--V tpmph RS11_MARPO : 126- 130: gcrpp RkrrV RS11_MARPO : 128- 130: rpprk Rr--V RS11_MYCBO : 90- 92: qdhgv Rk--V dvfvk RS11_MYCBO : 90- 94: qdhgv RkvdV fvkgp RS11_MYCBO : 128- 131: msppt Rit-V sgppn RS11_MYCBO : 138- 140: gppnh Rr--V RS11_ORYSA : 11- 14: pkigs Rrk-V riglr RS11_ORYSA : 12- 14: kigsr Rk--V riglr RS11_ORYSA : 57- 59: tdpqg Rv--V fwssa RS11_ORYSA : 82- 85: pyagq Rta-V dairt RS11_ORYSA : 89- 91: avdai Rt--V glqra RS11_ORYSA : 95- 98: tvglq Rae-V mvkga RS11_ORYSA : 125- 127: rlsci Rd--V tpmph RS11_PEA : 47- 50: tvtdv Rgr-V iswss RS11_PEA : 90- 93: eqgmq Rae-V rikgp RS11_PEA : 120- 122: llkvi Rd--V tplph RS11_PEA : 136- 138: rapkk Rr--V RS11_PINTH : 39- 42: tatdv Rgq-V lswss RS11_PINTH : 82- 85: drgme Rve-V misgp RS11_PINTH : 112- 114: llsfv Rd--V tpmph RS11_PINTH : 128- 130: rppkk Rr--V RS11_SPIOL : 47- 50: tvtdv Rgr-V vswas RS11_SPIOL : 47- 51: tvtdv RgrvV swasa RS11_SPIOL : 49- 51: tdvrg Rv--V swasa RS11_SPIOL : 81- 83: agnai Rt--V veqgm RS11_SPIOL : 81- 84: agnai Rtv-V eqgmq RS11_SPIOL : 90- 93: eqgmq Rae-V mikgp RS11_SPIOL : 120- 122: llsfv Rn--V tpmph RS11_SPIOL : 136- 138: rppkk Rr--V RS11_SULAC : 109- 113: gfiig RiedV tplph RS11_SULAC : 128- 132: rpggr RgrrV RS11_SULAC : 130- 132: ggrrg Rr--V RS11_THETH : 11- 13: kkkvk Rq--V asgra RS11_TOBAC : 47- 50: tvtdv Rgr-V vswss RS11_TOBAC : 47- 51: tvtdv RgrvV swssa RS11_TOBAC : 49- 51: tdvrg Rv--V swssa RS11_TOBAC : 81- 83: aanai Rt--V vdqgm RS11_TOBAC : 81- 84: aanai Rtv-V dqgmq RS11_TOBAC : 90- 93: dqgmq Rae-V mikgp RS11_TOBAC : 120- 122: lltfv Rd--V tpmph RS11_TOBAC : 136- 138: rppkk Rr--V RS14_ARATH : 61- 65: gmkig RiedV tpipt RS14_CHLRE : 130- 134: gmkig RiedV tpipt RS14_DROME : 4- 8: map RkakV qkeev RS14_DROME : 128- 132: smkig RiedV tpips RS14_HUMAN : 128- 132: gmkig RiedV tpips RS14_KLULA : 114- 118: glrig RiedV tpvps RS14_NEUCR : 129- 133: gmkig RiedV tptps RS14_PODCA : 128- 132: gmkig RiedV tpips RS14_RAT : 128- 132: gmkig RiedV tpips RS14_TRYBB : 121- 125: gmkig RiedV tpvpt RT11_ACACA : 44- 48: nyvsf RqrlV lakkn RT11_ACACA : 46- 48: vsfrq Rl--V lakkn RT11_ACACA : 67- 70: ffskk Rnn-V fltit RT11_ACACA : 80- 82: tdvig Rv--V vsqsa RT11_ACACA : 80- 83: tdvig Rvv-V sqsag RT11_MARPO : 107- 109: iitki Rd--V tptph RT11_MARPO : 123- 125: rppkk Rr--V RT11_PROWI : 55- 59: gfkns RkstV yasga RT11_PROWI : 79- 83: fnegy RtiiV kikgl RT11_PROWI : 126- 128: rppkk Rr--V I 9: 7.3401 127( 33) K-x(0,2)-R Occurences: 127(33) R141_MAIZE : 5- 7: msrr Kt-R epkee R141_MAIZE : 61- 64: ggmkv KadR dessp R141_MAIZE : 94- 96: talhi Kl-R atggn R141_MAIZE : 123- 126: arsgm KigR iedvt R141_MAIZE : 141- 144: dstrr KggR rgrrl R141_YEAST : 48- 51: ggmkv KadR dessp R141_YEAST : 69- 71: qdvaa Kc-R evgit R141_YEAST : 81- 83: tavhv Ki-R atggt R141_YEAST : 128- 131: dstrk KggR rgrrl R142_MAIZE : 5- 8: msgr KktR epkee R142_MAIZE : 6- 8: msgrk Kt-R epkee R142_MAIZE : 62- 65: ggmkv KadR dessp R142_MAIZE : 95- 97: talhi Kl-R atggn R142_MAIZE : 124- 127: arsgm KigR iedvt R142_MAIZE : 142- 145: dstrr KggR rgrrl R142_YEAST : 49- 52: ggmkv KadR dessp R142_YEAST : 82- 84: tavhv Ki-R atggt R142_YEAST : 129- 132: dstrk KggR rgrrl RS11_BACST : 8- 9: rtntr K--R rvrkn RS11_BACST : 8- 10: rtntr Kr-R vrkni RS11_BACST : 52- 55: gslgf KgsR kstpf RS11_BACST : 124- 125: gcrpp K--R rrv RS11_BACST : 124- 126: gcrpp Kr-R rv RS11_BACST : 124- 127: gcrpp KrrR v RS11_BACSU : 11- 12: ksntr K--R rvkkn RS11_BACSU : 11- 13: ksntr Kr-R vkkni RS11_BACSU : 127- 128: gcrpp K--R rrv RS11_BACSU : 127- 129: gcrpp Kr-R rv RS11_BACSU : 127- 130: gcrpp KrrR v RS11_ECOLI : 9- 10: pirar K--R vrkqv RS11_ECOLI : 9- 12: pirar KrvR kqvsd RS11_ECOLI : 124- 126: gcrpp Kk-R rv RS11_ECOLI : 124- 127: gcrpp KkrR v RS11_ECOLI : 125- 126: crppk K--R rv RS11_ECOLI : 125- 127: crppk Kr-R v RS11_EPIVI : 47- 49: avtdi Kg-R vvsws RS11_EPIVI : 62- 65: gtcgf KgtR rgtsf RS11_EPIVI : 132- 134: gcrpp Kk-R rv RS11_EPIVI : 132- 135: gcrpp KkrR v RS11_EPIVI : 133- 134: crppk K--R rv RS11_EPIVI : 133- 135: crppk Kr-R v RS11_EUGGR : 125- 126: gcrps K--R rri RS11_EUGGR : 125- 127: gcrps Kr-R ri RS11_EUGGR : 125- 128: gcrps KrrR i RS11_HAEIN : 9- 10: pvrar K--R vkkqv RS11_HAEIN : 124- 126: gcrpp Kk-R rv RS11_HAEIN : 124- 127: gcrpp KkrR v RS11_HAEIN : 125- 126: crppk K--R rv RS11_HAEIN : 125- 127: crppk Kr-R v RS11_HALMA : 43- 46: ggtvv KqnR deasp RS11_MAIZE : 12- 15: kigsr KkvR iglrr RS11_MAIZE : 13- 15: igsrk Kv-R iglrr RS11_MAIZE : 28- 31: rfslr KsaR ritkg RS11_MAIZE : 70- 73: gtcgf KssR kaspy RS11_MAIZE : 139- 141: gcrpp Kk-R rl RS11_MAIZE : 139- 142: gcrpp KkrR l RS11_MAIZE : 140- 141: crppk K--R rl RS11_MAIZE : 140- 142: crppk Kr-R l RS11_MARPO : 12- 15: kinlr KgkR rlpkg RS11_MARPO : 14- 15: nlrkg K--R rlpkg RS11_MARPO : 14- 16: nlrkg Kr-R lpkgv RS11_MARPO : 127- 128: crppr K--R rv RS11_MARPO : 127- 129: crppr Kr-R v RS11_MYCBO : 17- 19: arkgq Kt-R rrekk RS11_MYCBO : 17- 20: arkgq KtrR rekkn RS11_MYCBO : 63- 66: ghvvf KgsR kstpf RS11_ORYSA : 13- 15: igsrr Kv-R iglrr RS11_ORYSA : 28- 31: rfslr KsaR ritkg RS11_ORYSA : 70- 73: gtcgf KssR kaspy RS11_ORYSA : 139- 141: gcrpp Kk-R rl RS11_ORYSA : 139- 142: gcrpp KkrR l RS11_ORYSA : 140- 141: crppk K--R rl RS11_ORYSA : 140- 142: crppk Kr-R l RS11_PEA : 12- 15: kigsr KtgR igsrk RS11_PEA : 20- 23: rigsr KhpR kipkg RS11_PEA : 62- 65: gscgf KgtR rgtpf RS11_PEA : 117- 120: sgill KviR dvtpl RS11_PEA : 134- 136: gcrap Kk-R rv RS11_PEA : 134- 137: gcrap KkrR v RS11_PEA : 135- 136: crapk K--R rv RS11_PEA : 135- 137: crapk Kr-R v RS11_PINTH : 6- 7: mskti K--R igsrr RS11_PINTH : 54- 57: gacgf KgtR rgtpf RS11_PINTH : 126- 128: gcrpp Kk-R rv RS11_PINTH : 126- 129: gcrpp KkrR v RS11_PINTH : 127- 128: crppk K--R rv RS11_PINTH : 127- 129: crppk Kr-R v RS11_SPIOL : 20- 23: rissr KsaR kipkg RS11_SPIOL : 65- 66: gfrgt K--R gtpfa RS11_SPIOL : 134- 136: gcrpp Kk-R rv RS11_SPIOL : 134- 137: gcrpp KkrR v RS11_SPIOL : 135- 136: crppk K--R rv RS11_SPIOL : 135- 137: crppk Kr-R v RS11_SULAC : 44- 47: ggmvv KadR ekpsp RS11_SULAC : 77- 79: saihi Kv-R aqggy RS11_THETH : 8- 11: kpskk KvkR qvasg RS11_THETH : 10- 11: skkkv K--R qvasg RS11_TOBAC : 20- 23: rigsr KgaR ripkg RS11_TOBAC : 62- 65: gtsgf KgtR rgtpf RS11_TOBAC : 134- 136: gcrpp Kk-R rv RS11_TOBAC : 134- 137: gcrpp KkrR v RS11_TOBAC : 135- 136: crppk K--R rv RS11_TOBAC : 135- 137: crppk Kr-R v RS14_ARATH : 29- 31: taihv Kl-R atggn RS14_ARATH : 58- 61: arsgm KigR iedvt RS14_ARATH : 76- 79: dstrr KggR rgrrl RS14_CHLRE : 65- 68: ggmkv KadR dessp RS14_CHLRE : 98- 100: talhi Kl-R atggn RS14_CHLRE : 127- 130: aragm KigR iedvt RS14_CHLRE : 145- 148: dstrr KggR rgrrl RS14_DROME : 63- 66: ggmkv KadR deasp RS14_DROME : 96- 98: talhi Kl-R atggn RS14_DROME : 125- 128: arssm KigR iedvt RS14_DROME : 143- 146: dstrr KggR rgrrl RS14_HUMAN : 63- 66: ggmkv KadR dessp RS14_HUMAN : 96- 98: talhi Kl-R atggn RS14_HUMAN : 125- 128: arsgm KigR iedvt RS14_HUMAN : 143- 146: dstrr KggR rgrrl RS14_KLULA : 49- 52: ggmkv KadR dessp RS14_KLULA : 82- 84: tavhi Ki-R atggt RS14_KLULA : 129- 132: dstrk KggR rgrrl RS14_NEUCR : 5- 8: mppk KaaR paqen RS14_NEUCR : 64- 67: ggikv KadR dessp RS14_NEUCR : 97- 99: talhi Ki-R atggn RS14_NEUCR : 126- 129: arsgm KigR iedvt RS14_NEUCR : 144- 147: dstrr KggR rgrrl RS14_PODCA : 63- 66: ggmkv KadR dessp RS14_PODCA : 96- 98: talhv Kl-R atggn RS14_PODCA : 125- 128: arsgm KigR iedvt RS14_PODCA : 143- 146: dctrr KggR rgrrl RS14_RAT : 63- 66: ggmkv KadR dessp RS14_RAT : 96- 98: talhi Kl-R atggn RS14_RAT : 125- 128: arsgm KigR iedvt RS14_RAT : 143- 146: dstrr KggR rgrrl RS14_TRYBB : 56- 59: ggmkv KadR dessp RS14_TRYBB : 89- 91: nalhv Km-R atggv RS14_TRYBB : 118- 121: aragm KigR iedvt RS14_TRYBB : 136- 139: dstrr KgsR rgrrl RT11_ACACA : 11- 13: pitfr Kp-R iisqk RT11_ACACA : 19- 22: iisqk KvlR sklsk RT11_ACACA : 56- 58: kknpn Kk-R yylff RT11_ACACA : 57- 58: knpnk K--R yylff RT11_ACACA : 65- 67: ylffs Kk-R nnvfl RT11_ACACA : 66- 67: lffsk K--R nnvfl RT11_ACACA : 96- 99: kittk KkkR spdtl RT11_ACACA : 97- 99: ittkk Kk-R spdtl RT11_ACACA : 98- 99: ttkkk K--R spdtl RT11_ACACA : 113- 116: sasva KiaR aknik RT11_ACACA : 169- 172: lmrkk KakR l RT11_ACACA : 171- 172: rkkka K--R l RT11_MARPO : 49- 52: gsvgf KgsR rstny RT11_MARPO : 105- 107: gliit Ki-R dvtpt RT11_MARPO : 121- 123: gcrpp Kk-R rv RT11_MARPO : 121- 124: gcrpp KkrR v RT11_MARPO : 122- 123: crppk K--R rv RT11_MARPO : 122- 124: crppk Kr-R v RT11_PROWI : 52- 55: gtlgf KnsR kstvy RT11_PROWI : 124- 126: gcrpp Kk-R rv RT11_PROWI : 124- 127: gcrpp KkrR v RT11_PROWI : 125- 126: crppk K--R rv RT11_PROWI : 125- 127: crppk Kr-R v J 10: 7.3401 78( 33) V-x(0,2)-K Occurences: 78(33) R141_MAIZE : 60- 61: tggmk V--K adrde R141_YEAST : 47- 48: tggmk V--K adrde R141_YEAST : 66- 69: laaqd VaaK crevg R141_YEAST : 78- 81: vgita VhvK iratg R141_YEAST : 80- 81: itavh V--K iratg R142_MAIZE : 61- 62: tggmk V--K adrde R142_YEAST : 48- 49: tggmk V--K adrde R142_YEAST : 67- 70: laaqd VaaK ckevg R142_YEAST : 79- 82: vgita VhvK iratg R142_YEAST : 81- 82: itavh V--K iratg RS11_BACST : 11- 13: trkrr Vr-K nidtg RS11_BACST : 83- 86: mktve VnvK gpgag RS11_BACST : 85- 86: tvevn V--K gpgag RS11_BACSU : 14- 15: trkrr V--K knies RS11_BACSU : 14- 16: trkrr Vk-K niesg RS11_BACSU : 86- 89: lktle VtvK gpgsg RS11_BACSU : 88- 89: tlevt V--K gpgsg RS11_ECOLI : 11- 13: rarkr Vr-K qvsdg RS11_ECOLI : 73- 74: rcada V--K eygik RS11_ECOLI : 83- 86: iknle VmvK gpgpg RS11_ECOLI : 85- 86: nlevm V--K gpgpg RS11_EPIVI : 91- 94: mqrae VmiK gpgig RS11_EUGGR : 21- 24: fpkgi VhiK ttynn RS11_EUGGR : 71- 72: ttaia V--K kaieq RS11_EUGGR : 71- 73: ttaia Vk-K aieqg RS11_HAEIN : 11- 12: rarkr V--K kqvvd RS11_HAEIN : 11- 13: rarkr Vk-K qvvdg RS11_HAEIN : 73- 74: rcaei V--K efglk RS11_HAEIN : 83- 86: lknle VmvK gpgpg RS11_HAEIN : 85- 86: nlevm V--K gpgpg RS11_HALMA : 41- 43: ssggt Vv-K qnrde RS11_HALMA : 42- 43: sggtv V--K qnrde RS11_HALMA : 61- 64: qmaev VaeK aldrg RS11_MAIZE : 98- 101: lqrae VmvK gagsg RS11_MAIZE : 100- 101: raevm V--K gagsg RS11_MARPO : 5- 6: mpks V--K kinlr RS11_MARPO : 5- 7: mpks Vk-K inlrk RS11_MYCBO : 60- 63: assgh VvfK gsrks RS11_MYCBO : 61- 63: ssghv Vf-K gsrks RS11_MYCBO : 89- 91: aqdhg Vr-K vdvfv RS11_MYCBO : 94- 97: vrkvd VfvK gpgsg RS11_MYCBO : 96- 97: kvdvf V--K gpgsg RS11_ORYSA : 98- 101: lqrae VmvK gagsg RS11_ORYSA : 100- 101: raevm V--K gagsg RS11_PEA : 93- 96: mqrae VriK gpglg RS11_PINTH : 17- 19: rnehr Vl-K gviyv RS11_SPIOL : 93- 96: mqrae VmiK gpslg RS11_SULAC : 42- 44: asggm Vv-K adrek RS11_SULAC : 43- 44: sggmv V--K adrek RS11_THETH : 9- 10: pskkk V--K rqvas RS11_TOBAC : 93- 96: mqrae VmiK gpglg RS14_ARATH : 28- 29: itaih V--K lratg RS14_CHLRE : 64- 65: tggmk V--K adrde RS14_CHLRE : 83- 86: laaqd VaqK ckelg RS14_DROME : 8- 10: prkak Vq-K eevqv RS14_DROME : 62- 63: tggmk V--K adrde RS14_DROME : 81- 84: laaqd VaeK cktlg RS14_HUMAN : 62- 63: tggmk V--K adrde RS14_KLULA : 5- 8: manv VqaK dnsqv RS14_KLULA : 48- 49: tggmk V--K adrde RS14_KLULA : 67- 70: laaqd VaaK ckevg RS14_KLULA : 79- 82: vgita VhiK iratg RS14_NEUCR : 63- 64: iggik V--K adrde RS14_PODCA : 62- 63: tggmk V--K adrde RS14_PODCA : 83- 86: aqdva VrcK eigit RS14_PODCA : 95- 96: italh V--K lratg RS14_RAT : 62- 63: tggmk V--K adrde RS14_TRYBB : 7- 8: skkqe V--K yygss RS14_TRYBB : 55- 56: tggmk V--K adrde RS14_TRYBB : 88- 89: inalh V--K mratg RS14_TRYBB : 96- 99: ratgg VgtK spgpg RT11_ACACA : 28- 29: sklsk V--K kspwy RT11_ACACA : 28- 30: sklsk Vk-K spwyk RT11_ACACA : 48- 51: frqrl VlaK knpnk RT11_ACACA : 111- 113: tvsas Va-K iarak RT11_ACACA : 154- 157: filqg VvvK nkshg RT11_ACACA : 155- 157: ilqgv Vv-K nkshg RT11_ACACA : 156- 157: lqgvv V--K nkshg RT11_ACACA : 156- 159: lqgvv VknK shgll RT11_MARPO : 46- 49: sssgs VgfK gsrrs RT11_MARPO : 80- 83: fkfve VriK glgyg RT11_PROWI : 3- 4: ml V--K ksqis RT11_PROWI : 3- 5: ml Vk-K sqisr RT11_PROWI : 83- 84: yrtii V--K ikglg RT11_PROWI : 83- 86: yrtii VkiK glgyg RT11_PROWI : 105- 107: qksnl Vi-K qiqev Number of patterns evaluated by Pratt:18 Total running time: 1 seconds