------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 6 sequences from file RIBOSOMAL_L19 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 6 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_L19.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: RL19_BACST 116 RL19_ECOLI 114 RL19_HAEIN 115 RL19_SALTY 114 RL19_SERMA 117 RL19_SYNY3 122 Pratt run started at Thu Feb 6 21:05:46 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 90.7411 11( 6) V-x-V-x(0,2)-V-E-G-x(3)-R-x-Q-x(2)-E-x(2)-V-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H 2: 90.7411 6( 6) V-x(2)-V-E-G-x(3)-R-x-Q-x(2)-E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 3: 90.7411 6( 6) V-x-V-x(1,2)-V-x(0,1)-E-G-x(3)-R-x-Q-x(2)-E-x(2)-V-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H 4: 90.2411 11( 6) V-x(0,1)-V-x(0,2)-V-E-G-x(3)-R-x-Q-x(2)-E-x(2)-V-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H 5: 86.5711 6( 6) V-E-G-x(3)-R-x-Q-x(2)-E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 6: 86.5711 6( 6) K-x(1,2)-V-x(0,1)-E-G-x(3)-R-x-Q-x(2)-E-x(2)-V-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H 7: 82.4010 6( 6) D-x(5)-V-x(1,2)-V-x(0,1)-E-G-x(3)-R-x-Q-x(2)-E-x(2)-V-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R 8: 78.2310 6( 6) E-x(4)-R-x-Q-x(2)-E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 9: 74.0609 6( 6) R-x-Q-x(2)-E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 10: 74.0609 6( 6) G-x(5)-Q-x(2)-E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 11: 70.3909 6( 6) V-x(0,1)-R-x-G-x-V-R-x-A-K-L-Y-Y-L-R-x(3)-G-K-x(2)-R-I-K 12: 69.8909 6( 6) V-x(0,1)-R-x(0,1)-G-x-V-R-x-A-K-L-Y-Y-L-R-x(3)-G-K-x(2)-R-I-K 13: 69.8909 6( 6) V-x(1,2)-R-x(0,1)-G-x-V-R-x-A-K-L-Y-Y-L-R-x(3)-G-K-x(2)-R-I-K 14: 69.8909 6( 6) E-x(2)-V-I-x(2)-R-x(2)-G-x(1,2)-S-x(2,3)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 15: 69.8909 6( 6) Q-x(2)-E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 16: 65.7208 6( 6) V-I-x(2)-R-x(2)-G-x(1,2)-S-x(2,3)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 17: 65.7208 6( 6) E-x(1,2)-V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 18: 62.0508 11( 6) V-x(0,1)-I-x(2)-R-x(2)-G-x(5)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 19: 61.5508 6( 6) I-x(2)-R-x(2)-G-x(1,2)-S-x(2,3)-T-x-R-K-x(3)-G-x-G-V-E-R-x-F-x(2)-H-x-P 20: 57.3807 6( 6) R-x-A-K-L-Y-Y-L-R-x(1,2)-R-x(0,1)-G-K-x(2)-R-I-K Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 140.0523 6( 6) V-x-[IV]-V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P B 2: 137.9661 6( 6) D-[ST]-[ILV]-[EKR]-V-x-V-x(1,2)-V-x(0,1)-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R C 3: 136.8239 11( 6) V-x-V-x(0,2)-V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H D 4: 136.8239 6( 6) V-x-V-x(1,2)-V-x(0,1)-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H E 5: 136.3239 11( 6) V-x(0,1)-V-x(0,2)-V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H F 6: 135.8823 6( 6) V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV] G 7: 135.8293 6( 6) K-x(1,2)-V-x(0,1)-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST] H 8: 134.9484 6( 6) E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD] I 9: 132.1904 11( 6) V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V-R-[KR]-A J 10: 130.7784 6( 6) G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD] K 11: 125.9455 6( 6) R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V L 12: 125.9071 6( 6) Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR] M 13: 124.2721 6( 6) E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V N 14: 123.0141 6( 6) V-I-x(2)-R-[GN]-x-G-x(1,2)-S-x(2,3)-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V-R-[KR]-A O 15: 123.0141 6( 6) I-x(2)-R-[GN]-x-G-x(1,2)-S-x(2,3)-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V-R-[KR]-A-K P 16: 118.7678 6( 6) E-x-[TV]-V-I-x(2)-R-[GN]-x-G-x(1,2)-S-x(2,3)-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V Q 17: 91.8715 6( 6) V-x(0,1)-R-x-G-x-V-R-[KR]-A-K-L-Y-Y-L-R-[DE]-x(2)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] R 18: 91.3715 6( 6) V-x(0,1)-R-x(0,1)-G-x-V-R-[KR]-A-K-L-Y-Y-L-R-[DE]-x(2)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] S 19: 91.3715 6( 6) V-x(1,2)-R-x(0,1)-G-x-V-R-[KR]-A-K-L-Y-Y-L-R-[DE]-x(2)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] T 20: 75.6907 6( 6) R-[KR]-A-K-L-Y-Y-L-R-x(1,2)-R-x(0,1)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 140.0523 6( 6) V-x-[IV]-V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P Occurences: 6(6) RL19_BACST : 30- 79: tvrvh VkVVEGNRERIQVFEgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTP kiakl RL19_BACST : 30- 79: tvrvh VkVVEGNRERIQVFEg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTP kiakl RL19_ECOLI : 29- 78: tvevk VwVVEGSKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSP vvdsi RL19_ECOLI : 29- 78: tvevk VwVVEGSKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSP vvdsi RL19_HAEIN : 29- 78: tlevk VwVVEGSKRRLQAFEgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSP avdsi RL19_HAEIN : 29- 78: tlevk VwVVEGSKRRLQAFEg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSP avdsi RL19_SALTY : 29- 78: tvevk VwVVEGTKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSP vvdsi RL19_SALTY : 29- 78: tvevk VwVVEGTKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSP vvdsi RL19_SERMA : 29- 78: svevk VwVVEGSKKRLQAFErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSP vidsi RL19_SERMA : 29- 78: svevk VwVVEGSKKRLQAFEr-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSP vidsi RL19_SYNY3 : 34- 83: tikvg VkIVEGGKERIQPYEgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSP rvasi B 2: 137.9661 6( 6) D-[ST]-[ILV]-[EKR]-V-x-V-x(1,2)-V-x(0,1)-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R Occurences: 6(6) RL19_BACST : 24- 72: dfrpg DTVRVhVkvV-EGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVER tfpvh RL19_BACST : 24- 72: dfrpg DTVRVhVk-VvEGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVER tfpvh RL19_ECOLI : 23- 71: sfrpg DTVEVkVwvV-EGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVER vfqth RL19_ECOLI : 23- 71: sfrpg DTVEVkVw-VvEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVER vfqth RL19_HAEIN : 23- 71: sfrpg DTLEVkVwvV-EGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVER vfqth RL19_HAEIN : 23- 71: sfrpg DTLEVkVw-VvEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVER vfqth RL19_SALTY : 23- 71: sfrpg DTVEVkVwvV-EGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVER vfqth RL19_SALTY : 23- 71: sfrpg DTVEVkVw-VvEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVER vfqth RL19_SERMA : 23- 71: afrpg DSVEVkVwvV-EGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVER vfqth RL19_SERMA : 23- 71: afrpg DSVEVkVw-VvEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVER vfqth RL19_SYNY3 : 28- 76: tihvg DTIKVgVkiV-EGGKERIQPYEgTVIakRNgGIsETITVRKIfqGvGVER vfllh C 3: 136.8239 11( 6) V-x-V-x(0,2)-V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H Occurences: 11(6) RL19_BACST : 28- 77: gdtvr VhVkvVEGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvH tpkia RL19_BACST : 30- 77: tvrvh VkV--VEGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvH tpkia RL19_ECOLI : 27- 76: gdtve VkVwvVEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_ECOLI : 29- 76: tvevk VwV--VEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_HAEIN : 27- 76: gdtle VkVwvVEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtH spavd RL19_HAEIN : 29- 76: tlevk VwV--VEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtH spavd RL19_SALTY : 27- 76: gdtve VkVwvVEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_SALTY : 29- 76: tvevk VwV--VEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_SERMA : 27- 76: gdsve VkVwvVEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvid RL19_SERMA : 29- 76: svevk VwV--VEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvid RL19_SYNY3 : 32- 81: gdtik VgVkiVEGGKERIQPYEgTVIakRNgGIsETITVRKIfqGvGVERVFllH sprva D 4: 136.8239 6( 6) V-x-V-x(1,2)-V-x(0,1)-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H Occurences: 6(6) RL19_BACST : 28- 77: gdtvr VhVkvV-EGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvH tpkia RL19_BACST : 28- 77: gdtvr VhVk-VvEGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvH tpkia RL19_ECOLI : 27- 76: gdtve VkVwvV-EGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_ECOLI : 27- 76: gdtve VkVw-VvEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_HAEIN : 27- 76: gdtle VkVwvV-EGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtH spavd RL19_HAEIN : 27- 76: gdtle VkVw-VvEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtH spavd RL19_SALTY : 27- 76: gdtve VkVwvV-EGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_SALTY : 27- 76: gdtve VkVw-VvEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_SERMA : 27- 76: gdsve VkVwvV-EGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvid RL19_SERMA : 27- 76: gdsve VkVw-VvEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvid RL19_SYNY3 : 32- 81: gdtik VgVkiV-EGGKERIQPYEgTVIakRNgGIsETITVRKIfqGvGVERVFllH sprva E 5: 136.3239 11( 6) V-x(0,1)-V-x(0,2)-V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H Occurences: 11(6) RL19_BACST : 28- 77: gdtvr VhVkvVEGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvH tpkia RL19_BACST : 30- 77: tvrvh VkV--VEGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvH tpkia RL19_ECOLI : 27- 76: gdtve VkVwvVEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_ECOLI : 29- 76: tvevk VwV--VEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_HAEIN : 27- 76: gdtle VkVwvVEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtH spavd RL19_HAEIN : 29- 76: tlevk VwV--VEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtH spavd RL19_SALTY : 27- 76: gdtve VkVwvVEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_SALTY : 29- 76: tvevk VwV--VEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvvd RL19_SERMA : 27- 76: gdsve VkVwvVEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvid RL19_SERMA : 29- 76: svevk VwV--VEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtH spvid RL19_SYNY3 : 32- 81: gdtik VgVkiVEGGKERIQPYEgTVIakRNgGIsETITVRKIfqGvGVERVFllH sprva F 6: 135.8823 6( 6) V-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV] Occurences: 6(6) RL19_BACST : 33- 81: vhvkv VEGNRERIQVFEgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkI aklev RL19_BACST : 33- 81: vhvkv VEGNRERIQVFEg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkI aklev RL19_ECOLI : 32- 80: vkvwv VEGSKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvV dsisv RL19_ECOLI : 32- 80: vkvwv VEGSKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvV dsisv RL19_HAEIN : 32- 80: vkvwv VEGSKRRLQAFEgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaV dsiav RL19_HAEIN : 32- 80: vkvwv VEGSKRRLQAFEg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaV dsiav RL19_SALTY : 32- 80: vkvwv VEGTKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvV dsiav RL19_SALTY : 32- 80: vkvwv VEGTKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvV dsiav RL19_SERMA : 32- 80: vkvwv VEGSKKRLQAFErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvI dsitv RL19_SERMA : 32- 80: vkvwv VEGSKKRLQAFEr-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvI dsitv RL19_SYNY3 : 37- 85: vgvki VEGGKERIQPYEgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSPrV asikv G 7: 135.8293 6( 6) K-x(1,2)-V-x(0,1)-E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x-[TV]-V-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST] Occurences: 6(6) RL19_BACST : 31- 78: vrvhv Kv-V-EGNRERIQVFEgVVIkrRGaGIsETFTVRKVsyGvGVERTFpvHT pkiak RL19_ECOLI : 28- 77: dtvev KvwVvEGSKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtHS pvvds RL19_HAEIN : 28- 77: dtlev KvwVvEGSKRRLQAFEgVVIaiRNrGLhSAFTLRKVsnGvGVERVFqtHS pavds RL19_SALTY : 28- 77: dtvev KvwVvEGTKKRLQAFEgVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtHS pvvds RL19_SERMA : 28- 77: dsvev KvwVvEGSKKRLQAFErVVIaiRNrGLhSAFTVRKIsnGeGVERVFqtHS pvids RL19_SYNY3 : 35- 82: ikvgv Ki-V-EGGKERIQPYEgTVIakRNgGIsETITVRKIfqGvGVERVFllHS prvas H 8: 134.9484 6( 6) E-G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD] Occurences: 6(6) RL19_BACST : 34- 82: hvkvv EGNRERIQVFEgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIA klevi RL19_BACST : 34- 82: hvkvv EGNRERIQVFEg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIA klevi RL19_ECOLI : 33- 81: kvwvv EGSKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD sisvk RL19_ECOLI : 33- 81: kvwvv EGSKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD sisvk RL19_HAEIN : 33- 81: kvwvv EGSKRRLQAFEgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVD siavk RL19_HAEIN : 33- 81: kvwvv EGSKRRLQAFEg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVD siavk RL19_SALTY : 33- 81: kvwvv EGTKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD siavk RL19_SALTY : 33- 81: kvwvv EGTKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD siavk RL19_SERMA : 33- 81: kvwvv EGSKKRLQAFErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvID sitvk RL19_SERMA : 33- 81: kvwvv EGSKKRLQAFEr-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvID sitvk RL19_SYNY3 : 38- 86: gvkiv EGGKERIQPYEgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSPrVA sikvl I 9: 132.1904 11( 6) V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V-R-[KR]-A Occurences: 11(6) RL19_BACST : 46- 95: qvfeg VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkVRRA klyyl RL19_BACST : 47- 95: vfegv V-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkVRRA klyyl RL19_ECOLI : 45- 94: qafeg VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaVRKA klyyl RL19_ECOLI : 46- 94: afegv V-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaVRKA klyyl RL19_HAEIN : 45- 94: qafeg VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaVRKA klyyl RL19_HAEIN : 46- 94: afegv V-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaVRKA klyyl RL19_SALTY : 45- 94: qafeg VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaVRKA klyyl RL19_SALTY : 46- 94: afegv V-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaVRKA klyyl RL19_SERMA : 45- 94: qafer VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItVkRRGaVRKA klyyl RL19_SERMA : 46- 94: aferv V-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItVkRRGaVRKA klyyl RL19_SYNY3 : 51- 99: pyegt V-IakRNgGIsETITVRKIfqGvGVERVFllHSPrVAsIkVlRRGkVRRA klyyl J 10: 130.7784 6( 6) G-[GNST]-[KR]-[EKR]-R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD] Occurences: 6(6) RL19_BACST : 35- 82: vkvve GNRERIQVFEgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIA klevi RL19_BACST : 35- 82: vkvve GNRERIQVFEg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIA klevi RL19_ECOLI : 34- 81: vwvve GSKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD sisvk RL19_ECOLI : 34- 81: vwvve GSKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD sisvk RL19_HAEIN : 34- 81: vwvve GSKRRLQAFEgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVD siavk RL19_HAEIN : 34- 81: vwvve GSKRRLQAFEg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVD siavk RL19_SALTY : 34- 81: vwvve GTKKRLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD siavk RL19_SALTY : 34- 81: vwvve GTKKRLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVD siavk RL19_SERMA : 34- 81: vwvve GSKKRLQAFErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvID sitvk RL19_SERMA : 34- 81: vwvve GSKKRLQAFEr-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvID sitvk RL19_SYNY3 : 39- 86: vkive GGKERIQPYEgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSPrVA sikvl K 11: 125.9455 6( 6) R-[IL]-Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V Occurences: 6(6) RL19_BACST : 39- 86: egnre RIQVFEgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeV irrgk RL19_BACST : 39- 86: egnre RIQVFEg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeV irrgk RL19_ECOLI : 38- 85: egskk RLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsV krrga RL19_ECOLI : 38- 85: egskk RLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsV krrga RL19_HAEIN : 38- 85: egskr RLQAFEgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaV krkga RL19_HAEIN : 38- 85: egskr RLQAFEg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaV krkga RL19_SALTY : 38- 85: egtkk RLQAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaV krrga RL19_SALTY : 38- 85: egtkk RLQAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaV krrga RL19_SERMA : 38- 85: egskk RLQAFErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItV krrga RL19_SERMA : 38- 85: egskk RLQAFEr-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItV krrga RL19_SYNY3 : 43- 90: eggke RIQPYEgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSPrVAsIkV lrrgk L 12: 125.9071 6( 6) Q-[APV]-[FY]-E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR] Occurences: 6(6) RL19_BACST : 41- 89: nreri QVFEgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeViRR gkvrr RL19_BACST : 41- 89: nreri QVFEg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeViRR gkvrr RL19_ECOLI : 40- 88: skkrl QAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsVkRR gavrk RL19_ECOLI : 40- 88: skkrl QAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsVkRR gavrk RL19_HAEIN : 40- 88: skrrl QAFEgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaVkRK gavrk RL19_HAEIN : 40- 88: skrrl QAFEg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaVkRK gavrk RL19_SALTY : 40- 88: tkkrl QAFEgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaVkRR gavrk RL19_SALTY : 40- 88: tkkrl QAFEg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaVkRR gavrk RL19_SERMA : 40- 88: skkrl QAFErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItVkRR gavrk RL19_SERMA : 40- 88: skkrl QAFEr-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItVkRR gavrk RL19_SYNY3 : 45- 93: gkeri QPYEgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSPrVAsIkVlRR gkvrr M 13: 124.2721 6( 6) E-x(1,2)-V-x(0,1)-I-x(2)-R-[GN]-x-G-[IL]-x-[ES]-[AT]-[FI]-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V Occurences: 6(6) RL19_BACST : 44- 92: riqvf EgvV-IkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkV rrakl RL19_BACST : 44- 92: riqvf Eg-VvIkrRGaGIsETFTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkV rrakl RL19_ECOLI : 43- 91: rlqaf EgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaV rkakl RL19_ECOLI : 43- 91: rlqaf Eg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaV rkakl RL19_HAEIN : 43- 91: rlqaf EgvV-IaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaV rkakl RL19_HAEIN : 43- 91: rlqaf Eg-VvIaiRNrGLhSAFTLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaV rkakl RL19_SALTY : 43- 91: rlqaf EgvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaV rkakl RL19_SALTY : 43- 91: rlqaf Eg-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaV rkakl RL19_SERMA : 43- 91: rlqaf ErvV-IaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItVkRRGaV rkakl RL19_SERMA : 43- 91: rlqaf Er-VvIaiRNrGLhSAFTVRKIsnGeGVERVFqtHSPvIDsItVkRRGaV rkakl RL19_SYNY3 : 48- 96: riqpy EgtV-IakRNgGIsETITVRKIfqGvGVERVFllHSPrVAsIkVlRRGkV rrakl N 14: 123.0141 6( 6) V-I-x(2)-R-[GN]-x-G-x(1,2)-S-x(2,3)-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V-R-[KR]-A Occurences: 6(6) RL19_BACST : 47- 95: vfegv VIkrRGaGi-SetfTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkVRRA klyyl RL19_ECOLI : 46- 94: afegv VIaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaVRKA klyyl RL19_HAEIN : 46- 94: afegv VIaiRNrGlhSaf-TLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaVRKA klyyl RL19_SALTY : 46- 94: afegv VIaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaVRKA klyyl RL19_SERMA : 46- 94: aferv VIaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvIDsItVkRRGaVRKA klyyl RL19_SYNY3 : 51- 99: pyegt VIakRNgGi-SetiTVRKIfqGvGVERVFllHSPrVAsIkVlRRGkVRRA klyyl O 15: 123.0141 6( 6) I-x(2)-R-[GN]-x-G-x(1,2)-S-x(2,3)-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V-R-[KR]-A-K Occurences: 6(6) RL19_BACST : 48- 96: fegvv IkrRGaGi-SetfTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkVRRAK lyylr RL19_ECOLI : 47- 95: fegvv IaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaVRKAK lyylr RL19_HAEIN : 47- 95: fegvv IaiRNrGlhSaf-TLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaVRKAK lyylr RL19_SALTY : 47- 95: fegvv IaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaVRKAK lyylr RL19_SERMA : 47- 95: fervv IaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvIDsItVkRRGaVRKAK lyylr RL19_SYNY3 : 52- 100: yegtv IakRNgGi-SetiTVRKIfqGvGVERVFllHSPrVAsIkVlRRGkVRRAK lyylr P 16: 118.7678 6( 6) E-x-[TV]-V-I-x(2)-R-[GN]-x-G-x(1,2)-S-x(2,3)-T-[LV]-R-K-[IV]-x(2)-G-x-G-V-E-R-[TV]-F-x(2)-H-[ST]-P-x-[IV]-[AD]-x-[IL]-x-V-x-R-[KR]-G-x-V Occurences: 6(6) RL19_BACST : 44- 92: riqvf EgVVIkrRGaGi-SetfTVRKVsyGvGVERTFpvHTPkIAkLeViRRGkV rrakl RL19_ECOLI : 43- 91: rlqaf EgVVIaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvVDsIsVkRRGaV rkakl RL19_HAEIN : 43- 91: rlqaf EgVVIaiRNrGlhSaf-TLRKVsnGvGVERVFqtHSPaVDsIaVkRKGaV rkakl RL19_SALTY : 43- 91: rlqaf EgVVIaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvVDsIaVkRRGaV rkakl RL19_SERMA : 43- 91: rlqaf ErVVIaiRNrGlhSaf-TVRKIsnGeGVERVFqtHSPvIDsItVkRRGaV rkakl RL19_SYNY3 : 48- 96: riqpy EgTVIakRNgGi-SetiTVRKIfqGvGVERVFllHSPrVAsIkVlRRGkV rrakl Q 17: 91.8715 6( 6) V-x(0,1)-R-x-G-x-V-R-[KR]-A-K-L-Y-Y-L-R-[DE]-x(2)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] Occurences: 6(6) RL19_BACST : 86- 115: iakle ViRrGkVRRAKLYYLRElrGKAARIKEKtA q RL19_ECOLI : 85- 114: vdsis VkRrGaVRKAKLYYLRErtGKAARIKERlN RL19_HAEIN : 85- 114: vdsia VkRkGaVRKAKLYYLRErsGKSARIKERlG a RL19_SALTY : 85- 114: vdsia VkRrGaVRKAKLYYLRErtGKAARIKERlN RL19_SERMA : 85- 114: idsit VkRrGaVRKAKLYYLRErtGKAARIKERlN rvg RL19_SYNY3 : 90- 119: vasik VlRrGkVRRAKLYYLRDrvGKATRIKQRfD ral R 18: 91.3715 6( 6) V-x(0,1)-R-x(0,1)-G-x-V-R-[KR]-A-K-L-Y-Y-L-R-[DE]-x(2)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] Occurences: 6(6) RL19_BACST : 86- 115: iakle ViRrGkVRRAKLYYLRElrGKAARIKEKtA q RL19_ECOLI : 85- 114: vdsis VkRrGaVRKAKLYYLRErtGKAARIKERlN RL19_HAEIN : 85- 114: vdsia VkRkGaVRKAKLYYLRErsGKSARIKERlG a RL19_SALTY : 85- 114: vdsia VkRrGaVRKAKLYYLRErtGKAARIKERlN RL19_SERMA : 85- 114: idsit VkRrGaVRKAKLYYLRErtGKAARIKERlN rvg RL19_SYNY3 : 90- 119: vasik VlRrGkVRRAKLYYLRDrvGKATRIKQRfD ral S 19: 91.3715 6( 6) V-x(1,2)-R-x(0,1)-G-x-V-R-[KR]-A-K-L-Y-Y-L-R-[DE]-x(2)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] Occurences: 6(6) RL19_BACST : 86- 115: iakle VirR-GkVRRAKLYYLRElrGKAARIKEKtA q RL19_BACST : 86- 115: iakle Vi-RrGkVRRAKLYYLRElrGKAARIKEKtA q RL19_ECOLI : 85- 114: vdsis VkrR-GaVRKAKLYYLRErtGKAARIKERlN RL19_ECOLI : 85- 114: vdsis Vk-RrGaVRKAKLYYLRErtGKAARIKERlN RL19_HAEIN : 85- 114: vdsia Vk-RkGaVRKAKLYYLRErsGKSARIKERlG a RL19_SALTY : 85- 114: vdsia VkrR-GaVRKAKLYYLRErtGKAARIKERlN RL19_SALTY : 85- 114: vdsia Vk-RrGaVRKAKLYYLRErtGKAARIKERlN RL19_SERMA : 85- 114: idsit VkrR-GaVRKAKLYYLRErtGKAARIKERlN rvg RL19_SERMA : 85- 114: idsit Vk-RrGaVRKAKLYYLRErtGKAARIKERlN rvg RL19_SYNY3 : 90- 119: vasik VlrR-GkVRRAKLYYLRDrvGKATRIKQRfD ral RL19_SYNY3 : 90- 119: vasik Vl-RrGkVRRAKLYYLRDrvGKATRIKQRfD ral T 20: 75.6907 6( 6) R-[KR]-A-K-L-Y-Y-L-R-x(1,2)-R-x(0,1)-G-K-[AS]-[AT]-R-I-K-[EQ]-[KR]-x-[ADGN] Occurences: 6(6) RL19_BACST : 93- 115: rrgkv RRAKLYYLRelR-GKAARIKEKtA q RL19_ECOLI : 92- 114: rrgav RKAKLYYLRe-RtGKAARIKERlN RL19_HAEIN : 92- 114: rkgav RKAKLYYLRe-RsGKSARIKERlG a RL19_SALTY : 92- 114: rrgav RKAKLYYLRe-RtGKAARIKERlN RL19_SERMA : 92- 114: rrgav RKAKLYYLRe-RtGKAARIKERlN rvg RL19_SYNY3 : 97- 119: rrgkv RRAKLYYLRd-RvGKATRIKQRfD ral Number of patterns evaluated by Pratt:3950 Total running time: 1 seconds