------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 8 sequences from file RIBOSOMAL_L18E PATTERN CONSERVATION: CM: min Nr of Seqs to Match 8 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_L18E.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: RL18_ARATH 187 RL18_HUMAN 187 RL18_MOUSE 187 RL18_RAT 187 RL18_SALSA 179 RL18_YEAST 186 RLNA_XENLA 187 RLNB_XENLA 187 Pratt run started at Thu Feb 6 21:05:44 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 44.8706 8( 8) F-x(2,3)-V-x(0,1)-L-x(2)-L-F-x-S-x(3)-R-x-P-x-S-x-S-R 2: 40.7005 16( 8) V-x(0,1)-V-x(0,1)-G-x(2)-T-x-D-x-R-x(4)-P-x(3)-V-x-A-L 3: 40.7005 8( 8) F-N-x-V-x-L-x(2)-L-F-x-S-x(3)-R-x(0,1)-P-x(2,3)-S 4: 40.7005 8( 8) T-x(2,3)-F-N-x-V-x-L-x(2)-L-F-x-S-x(3)-R-x(0,1)-P 5: 39.7005 8( 8) A-x(2,4)-V-x(0,2)-G-x(2)-T-x-D-x-R-x(4)-P-x(3)-V-x-A-L 6: 37.5305 8( 8) L-x(2)-L-F-x-S-x(3)-R-x-P-x-S-x-S-R 7: 37.0305 8( 8) L-x(1,2)-L-F-x-S-x(3)-R-x-P-x-S-x-S-R 8: 36.5305 8( 8) N-x-V-x-L-x(2)-L-F-x-S-x(3)-R-x(0,1)-P-x(2,3)-S 9: 35.5305 8( 8) V-G-x(0,2)-T-x(1,3)-D-x-R-x(4)-P-x(3)-V-x-A-L 10: 32.3604 8( 8) G-x(2)-T-x(0,1)-D-x(1,2)-R-x(4)-P-x(3)-V-x-A-L 11: 32.3604 8( 8) V-x-L-x(2)-L-F-x-S-x(3)-R-x(0,1)-P-x(2,3)-S 12: 31.8604 19( 8) V-x(2,3)-T-x(1,3)-D-x-R-x(4)-P-x(3)-V-x-A-L 13: 31.3604 8( 8) T-x-D-x-R-x(4)-P-x(0,2)-K-x(0,2)-V-x-A-L 14: 28.1904 8( 8) L-x(2)-P-x(3)-R-x(1,2)-V-x(1,2)-H-F-x(3)-P 15: 28.1904 8( 8) T-x(0,1)-D-x(1,2)-R-x(4)-P-x(3)-V-x-A-L 16: 28.1904 14( 8) T-x(1,2)-D-x(1,2)-R-x(4)-P-x(3)-V-x-A-L 17: 28.1904 8( 8) L-x(2)-L-F-x-S-x(3)-R-x(0,1)-P-x(2,3)-S 18: 28.1904 15( 8) V-x(0,1)-L-x(2)-L-F-x-S-x(3)-R-x(0,1)-P 19: 27.1904 8( 8) D-x-R-x(4)-P-x(0,2)-K-x(0,2)-V-x-A-L 20: 24.0203 8( 8) P-x(3)-R-x(1,2)-V-x(1,2)-H-F-x(3)-P Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 110.6905 16( 8) V-x(0,1)-V-x(0,1)-G-x-[IV]-T-[AD]-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV] B 2: 107.2106 8( 8) T-[AD]-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(0,2)-K-x(0,2)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ] C 3: 105.6292 8( 8) D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(0,2)-K-x(0,2)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ]-x-[GNS]-[TV] D 4: 102.3150 8( 8) G-x-[IV]-T-x(0,1)-D-x(1,2)-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP] E 5: 101.6784 8( 8) V-G-x(0,2)-T-x(1,3)-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS] F 6: 100.8599 8( 8) T-x(0,1)-D-x(1,2)-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ]-x-[GNS] G 7: 100.7528 8( 8) A-x(2,4)-V-x(0,2)-G-x-[IV]-T-[AD]-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG] H 8: 98.2069 14( 8) T-x(1,2)-D-x(1,2)-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ] I 9: 98.0083 19( 8) V-x(2,3)-T-x(1,3)-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS] J 10: 75.5253 8( 8) F-x(2,3)-V-x(0,1)-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-[APS]-P-[LMV]-S-[LMV]-S-R-[ILM]-[AIV]-[ER]-x-[LM] K 11: 70.4566 8( 8) F-N-x-V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] L 12: 66.3925 8( 8) T-x(2,3)-F-N-x-V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-[LP]-x(2)-[SV]-[RS]-x-[IMV] M 13: 66.2865 8( 8) N-x-V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] N 14: 66.2709 8( 8) L-[RS]-[AG]-P-[KR]-x-[AGS]-R-x(1,2)-V-x(1,2)-H-F-[AG]-x-[AGV]-P-x(2)-[GP]-x-[AST]-x(3)-[LPV]-x-[STV]-x(4)-[ER]-[KR]-x-[ERS] O 15: 64.9370 8( 8) L-x(2)-L-F-[LM]-S-[KR]-x(2)-R-[APS]-P-[LMV]-S-[LMV]-S-R-[ILM]-[AIV]-[ER]-x-[LM] P 16: 64.4370 8( 8) L-x(1,2)-L-F-[LM]-S-[KR]-x(2)-R-[APS]-P-[LMV]-S-[LMV]-S-R-[ILM]-[AIV]-[ER]-x-[LM] Q 17: 62.1165 8( 8) V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] R 18: 55.7115 8( 8) P-[KR]-x-[AGS]-R-x(1,2)-V-x(1,2)-H-F-[AG]-x-[AGV]-P-x(2)-[GP]-x-[AST]-x(3)-[LPV]-x-[STV]-x(4)-[ER]-[KR]-x-[ERS] S 19: 54.7216 8( 8) L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] T 20: 50.6575 15( 8) V-x(0,1)-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-[LP]-x(2)-[SV]-[RS]-x-[IMV] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 110.6905 16( 8) V-x(0,1)-V-x(0,1)-G-x-[IV]-T-[AD]-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV] Occurences: 16(8) RL18_ARATH : 80- 127: edkia VlV-GtITDDLRVhEIPamkVTALRFTerARARIeKaGGecltFDqLAL raplg RL18_HUMAN : 80- 127: enkta VvV-GtITDDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLAL dspkg RL18_HUMAN : 80- 127: enkta V-VvGtITDDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLAL dspkg RL18_HUMAN : 81- 127: nktav V-V-GtITDDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLAL dspkg RL18_MOUSE : 80- 127: enkta VvV-GtVTDDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLAL espkg RL18_MOUSE : 80- 127: enkta V-VvGtVTDDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLAL espkg RL18_MOUSE : 81- 127: nktav V-V-GtVTDDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLAL espkg RL18_RAT : 80- 127: enkta VvV-GtITDDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLAL espkg RL18_RAT : 80- 127: enkta V-VvGtITDDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLAL espkg RL18_RAT : 81- 127: nktav V-V-GtITDDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLAL espkg RL18_SALSA : 80- 127: enrta VvV-GtVTDDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALA apnrq RL18_SALSA : 80- 127: enrta V-VvGtVTDDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALA apnrq RL18_SALSA : 81- 127: nrtav V-V-GtVTDDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALA apnrq RL18_YEAST : 81- 129: aankt VvVvGtVTDDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAV rapkg RL18_YEAST : 82- 129: anktv VvV-GtVTDDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAV rapkg RL18_YEAST : 82- 129: anktv V-VvGtVTDDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAV rapkg RL18_YEAST : 83- 129: nktvv V-V-GtVTDDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAV rapkg RLNA_XENLA : 80- 127: enkta VvV-GcITADVRIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLAL aapkg RLNA_XENLA : 80- 127: enkta V-VvGcITADVRIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLAL aapkg RLNA_XENLA : 81- 127: nktav V-V-GcITADVRIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLAL aapkg RLNB_XENLA : 80- 127: enkta VvV-GyITDDVRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLAL aapkg RLNB_XENLA : 80- 127: enkta V-VvGyITDDVRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLAL aapkg RLNB_XENLA : 81- 127: nktav V-V-GyITDDVRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLAL aapkg B 2: 107.2106 8( 8) T-[AD]-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(0,2)-K-x(0,2)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ] Occurences: 8(8) RL18_ARATH : 86- 132: lvgti TDDLRVhEIPamK--VTALRFTerARARIeKaGGecltFDqLALrAPlG qntvl RL18_HUMAN : 86- 132: vvgti TDDVRVqEVPklK--VCALRVTsrARSRIlRaGGkiltFDqLALdSPkG cgtvl RL18_HUMAN : 86- 132: vvgti TDDVRVqEVP--KlkVCALRVTsrARSRIlRaGGkiltFDqLALdSPkG cgtvl RL18_MOUSE : 86- 132: vvgtv TDDVRIlEVPklK--VCALRVSsrVRSRIlKgGGkiltFDqLALeSPkG rgtvl RL18_MOUSE : 86- 132: vvgtv TDDVRIlEVP--KlkVCALRVSsrVRSRIlKgGGkiltFDqLALeSPkG rgtvl RL18_RAT : 86- 132: vvgti TDDVRIlEVPklK--VCALRVSsrARSRIlKaGGkiltFDqLALeSPkG rgtvl RL18_RAT : 86- 132: vvgti TDDVRIlEVP--KlkVCALRVSsrARSRIlKaGGkiltFDqLALeSPkG rgtvl RL18_SALSA : 86- 132: vvgtv TDDVRIhEIPnlK--VSALKITrrNRTRIlKfVQimrfVGlALAaPNrQ ksvll RL18_YEAST : 88- 134: vvgtv TDDARIfEFP--KttVAALRFTagARAKIvKaGGecitLDqLAVrAPkG qntli RLNA_XENLA : 86- 132: vvgci TADVRIhDIP--KltVCALKLTsgARSRIlKaGGqimtFDqLALaAPkG qntvl RLNB_XENLA : 86- 132: vvgyi TDDVRIhDIPklK--VCALKITsgDRSRIlKsGGqimtFDqLALaAPkG qntvl RLNB_XENLA : 86- 132: vvgyi TDDVRIhDIP--KlkVCALKITsgDRSRIlKsGGqimtFDqLALaAPkG qntvl C 3: 105.6292 8( 8) D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(0,2)-K-x(0,2)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ]-x-[GNS]-[TV] Occurences: 8(8) RL18_ARATH : 88- 135: gtitd DLRVhEIPamK--VTALRFTerARARIeKaGGecltFDqLALrAPlGqNT vllrg RL18_HUMAN : 88- 135: gtitd DVRVqEVPklK--VCALRVTsrARSRIlRaGGkiltFDqLALdSPkGcGT vllsg RL18_HUMAN : 88- 135: gtitd DVRVqEVP--KlkVCALRVTsrARSRIlRaGGkiltFDqLALdSPkGcGT vllsg RL18_MOUSE : 88- 135: gtvtd DVRIlEVPklK--VCALRVSsrVRSRIlKgGGkiltFDqLALeSPkGrGT vllsg RL18_MOUSE : 88- 135: gtvtd DVRIlEVP--KlkVCALRVSsrVRSRIlKgGGkiltFDqLALeSPkGrGT vllsg RL18_RAT : 88- 135: gtitd DVRIlEVPklK--VCALRVSsrARSRIlKaGGkiltFDqLALeSPkGrGT vllsg RL18_RAT : 88- 135: gtitd DVRIlEVP--KlkVCALRVSsrARSRIlKaGGkiltFDqLALeSPkGrGT vllsg RL18_SALSA : 88- 135: gtvtd DVRIhEIPnlK--VSALKITrrNRTRIlKfVQimrfVGlALAaPNrQkSV llsap RL18_YEAST : 90- 137: gtvtd DARIfEFP--KttVAALRFTagARAKIvKaGGecitLDqLAVrAPkGqNT lilrg RLNA_XENLA : 88- 135: gcita DVRIhDIP--KltVCALKLTsgARSRIlKaGGqimtFDqLALaAPkGqNT vllsg RLNB_XENLA : 88- 135: gyitd DVRIhDIPklK--VCALKITsgDRSRIlKsGGqimtFDqLALaAPkGqNT vllsg RLNB_XENLA : 88- 135: gyitd DVRIhDIP--KlkVCALKITsgDRSRIlKsGGqimtFDqLALaAPkGqNT vllsg D 4: 102.3150 8( 8) G-x-[IV]-T-x(0,1)-D-x(1,2)-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP] Occurences: 8(8) RL18_ARATH : 83- 130: iavlv GtITdDl-RVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrAP lgqnt RL18_ARATH : 83- 130: iavlv GtIT-DdlRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrAP lgqnt RL18_HUMAN : 83- 130: tavvv GtITdDv-RVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdSP kgcgt RL18_HUMAN : 83- 130: tavvv GtIT-DdvRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdSP kgcgt RL18_MOUSE : 83- 130: tavvv GtVTdDv-RIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeSP kgrgt RL18_MOUSE : 83- 130: tavvv GtVT-DdvRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeSP kgrgt RL18_RAT : 83- 130: tavvv GtITdDv-RIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeSP kgrgt RL18_RAT : 83- 130: tavvv GtIT-DdvRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeSP kgrgt RL18_SALSA : 83- 130: tavvv GtVTdDv-RIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaPN rqksv RL18_SALSA : 83- 130: tavvv GtVT-DdvRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaPN rqksv RL18_YEAST : 85- 132: tvvvv GtVTdDa-RIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrAP kgqnt RL18_YEAST : 85- 132: tvvvv GtVT-DdaRIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrAP kgqnt RLNA_XENLA : 83- 130: tavvv GcITaDv-RIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLALaAP kgqnt RLNB_XENLA : 83- 130: tavvv GyITdDv-RIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaAP kgqnt RLNB_XENLA : 83- 130: tavvv GyIT-DdvRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaAP kgqnt E 5: 101.6784 8( 8) V-G-x(0,2)-T-x(1,3)-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS] Occurences: 8(8) RL18_ARATH : 82- 129: kiavl VGtiTd--DLRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrA plgqn RL18_ARATH : 82- 129: kiavl VG--TitdDLRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrA plgqn RL18_HUMAN : 82- 129: ktavv VGtiTd--DVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdS pkgcg RL18_HUMAN : 82- 129: ktavv VG--TitdDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdS pkgcg RL18_MOUSE : 82- 129: ktavv VGtvTd--DVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeS pkgrg RL18_MOUSE : 82- 129: ktavv VG--TvtdDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeS pkgrg RL18_RAT : 82- 129: ktavv VGtiTd--DVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeS pkgrg RL18_RAT : 82- 129: ktavv VG--TitdDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeS pkgrg RL18_SALSA : 82- 129: rtavv VGtvTd--DVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaP nrqks RL18_SALSA : 82- 129: rtavv VG--TvtdDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaP nrqks RL18_YEAST : 84- 131: ktvvv VGtvTd--DARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrA pkgqn RL18_YEAST : 84- 131: ktvvv VG--TvtdDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrA pkgqn RLNA_XENLA : 82- 129: ktavv VGciTa--DVRIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLALaA pkgqn RLNB_XENLA : 82- 129: ktavv VGyiTd--DVRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaA pkgqn F 6: 100.8599 8( 8) T-x(0,1)-D-x(1,2)-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ]-x-[GNS] Occurences: 8(8) RL18_ARATH : 86- 134: lvgti TdDl-RVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrAPlGqN tvllr RL18_ARATH : 86- 134: lvgti T-DdlRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrAPlGqN tvllr RL18_HUMAN : 86- 134: vvgti TdDv-RVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdSPkGcG tvlls RL18_HUMAN : 86- 134: vvgti T-DdvRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdSPkGcG tvlls RL18_MOUSE : 86- 134: vvgtv TdDv-RIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeSPkGrG tvlls RL18_MOUSE : 86- 134: vvgtv T-DdvRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeSPkGrG tvlls RL18_RAT : 86- 134: vvgti TdDv-RIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeSPkGrG tvlls RL18_RAT : 86- 134: vvgti T-DdvRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeSPkGrG tvlls RL18_SALSA : 86- 134: vvgtv TdDv-RIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaPNrQkS vllsa RL18_SALSA : 86- 134: vvgtv T-DdvRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaPNrQkS vllsa RL18_YEAST : 88- 136: vvgtv TdDa-RIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrAPkGqN tlilr RL18_YEAST : 88- 136: vvgtv T-DdaRIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrAPkGqN tlilr RLNA_XENLA : 86- 134: vvgci TaDv-RIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLALaAPkGqN tvlls RLNB_XENLA : 86- 134: vvgyi TdDv-RIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaAPkGqN tvlls RLNB_XENLA : 86- 134: vvgyi T-DdvRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaAPkGqN tvlls G 7: 100.7528 8( 8) A-x(2,4)-V-x(0,2)-G-x-[IV]-T-[AD]-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG] Occurences: 8(8) RL18_ARATH : 79- 123: kedki Avl--V--GtITDDLRVhEIPamkVTALRFTerARARIeKaGGecltFD qlalr RL18_HUMAN : 79- 123: renkt Avv--V--GtITDDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFD qlald RL18_MOUSE : 79- 123: renkt Avv--V--GtVTDDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFD qlale RL18_RAT : 79- 123: renkt Avv--V--GtITDDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFD qlale RL18_SALSA : 79- 123: renrt Avv--V--GtVTDDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVG lalaa RL18_YEAST : 77- 125: kqega AnktvVvvGtVTDDARIfEFPkttVAALRFTagARAKIvKaGGecitLD qlavr RLNA_XENLA : 79- 123: renkt Avv--V--GcITADVRIhDIPkltVCALKLTsgARSRIlKaGGqimtFD qlala RLNB_XENLA : 79- 123: renkt Avv--V--GyITDDVRIhDIPklkVCALKITsgDRSRIlKsGGqimtFD qlala H 8: 98.2069 14( 8) T-x(1,2)-D-x(1,2)-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS]-[NP]-x-[GQ] Occurences: 14(8) RL18_ARATH : 84- 132: avlvg TitDdlRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrAPlG qntvl RL18_ARATH : 86- 132: lvgti Td-Dl-RVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrAPlG qntvl RL18_HUMAN : 84- 132: avvvg TitDdvRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdSPkG cgtvl RL18_HUMAN : 86- 132: vvgti Td-Dv-RVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdSPkG cgtvl RL18_MOUSE : 84- 132: avvvg TvtDdvRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeSPkG rgtvl RL18_MOUSE : 86- 132: vvgtv Td-Dv-RIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeSPkG rgtvl RL18_RAT : 84- 132: avvvg TitDdvRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeSPkG rgtvl RL18_RAT : 86- 132: vvgti Td-Dv-RIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeSPkG rgtvl RL18_SALSA : 84- 132: avvvg TvtDdvRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaPNrQ ksvll RL18_SALSA : 86- 132: vvgtv Td-Dv-RIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaPNrQ ksvll RL18_YEAST : 86- 134: vvvvg TvtDdaRIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrAPkG qntli RL18_YEAST : 88- 134: vvgtv Td-Da-RIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrAPkG qntli RLNA_XENLA : 86- 132: vvgci Ta-Dv-RIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLALaAPkG qntvl RLNB_XENLA : 86- 132: vvgyi Td-Dv-RIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaAPkG qntvl I 9: 98.0083 19( 8) V-x(2,3)-T-x(1,3)-D-[ALV]-R-[IV]-x-[DE]-[FIV]-P-x(3)-V-[ACST]-A-L-[KR]-[FILV]-[ST]-x(2)-[ADNV]-R-[AST]-[KR]-I-x-[KR]-x-[GV]-[GQ]-x(4)-[FLV]-[DG]-x-[AL]-[AL]-[ALV]-x-[APS] Occurences: 19(8) RL18_ARATH : 80- 129: edkia VlvgTitdDLRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrA plgqn RL18_ARATH : 82- 129: kiavl VgtiTd--DLRVhEIPamkVTALRFTerARARIeKaGGecltFDqLALrA plgqn RL18_HUMAN : 80- 129: enkta VvvgTitdDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdS pkgcg RL18_HUMAN : 81- 129: nktav Vvg-TitdDVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdS pkgcg RL18_HUMAN : 82- 129: ktavv VgtiTd--DVRVqEVPklkVCALRVTsrARSRIlRaGGkiltFDqLALdS pkgcg RL18_MOUSE : 80- 129: enkta VvvgTvtdDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeS pkgrg RL18_MOUSE : 81- 129: nktav Vvg-TvtdDVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeS pkgrg RL18_MOUSE : 82- 129: ktavv VgtvTd--DVRIlEVPklkVCALRVSsrVRSRIlKgGGkiltFDqLALeS pkgrg RL18_RAT : 80- 129: enkta VvvgTitdDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeS pkgrg RL18_RAT : 81- 129: nktav Vvg-TitdDVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeS pkgrg RL18_RAT : 82- 129: ktavv VgtiTd--DVRIlEVPklkVCALRVSsrARSRIlKaGGkiltFDqLALeS pkgrg RL18_SALSA : 80- 129: enrta VvvgTvtdDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaP nrqks RL18_SALSA : 81- 129: nrtav Vvg-TvtdDVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaP nrqks RL18_SALSA : 82- 129: rtavv VgtvTd--DVRIhEIPnlkVSALKITrrNRTRIlKfVQimrfVGlALAaP nrqks RL18_YEAST : 82- 131: anktv VvvgTvtdDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrA pkgqn RL18_YEAST : 83- 131: nktvv Vvg-TvtdDARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrA pkgqn RL18_YEAST : 84- 131: ktvvv VgtvTd--DARIfEFPkttVAALRFTagARAKIvKaGGecitLDqLAVrA pkgqn RLNA_XENLA : 82- 129: ktavv VgciTa--DVRIhDIPkltVCALKLTsgARSRIlKaGGqimtFDqLALaA pkgqn RLNB_XENLA : 82- 129: ktavv VgyiTd--DVRIhDIPklkVCALKITsgDRSRIlKsGGqimtFDqLALaA pkgqn J 10: 75.5253 8( 8) F-x(2,3)-V-x(0,1)-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-[APS]-P-[LMV]-S-[LMV]-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 44- 71: rtnsk Fng-ViLKrLFMSKvnRAPLSLSRLVEfM tgked RL18_HUMAN : 42- 69: rtnst FnqvV-LKrLFMSRtnRPPLSLSRMIRkM klpgr RL18_HUMAN : 42- 69: rtnst Fnq-VvLKrLFMSRtnRPPLSLSRMIRkM klpgr RL18_MOUSE : 42- 69: rtnst FnqvV-LKrLFMSRtnRSPLSLSRMIRkM klpgr RL18_MOUSE : 42- 69: rtnst Fnq-VvLKrLFMSRtnRSPLSLSRMIRkM klpgr RL18_RAT : 42- 69: rtnst FnqvV-LKrLFMSRtnRPPLSLSRMIRkM klpgr RL18_RAT : 42- 69: rtnst Fnq-VvLKrLFMSRtnRPPLSLSRMIRkM klpgr RL18_SALSA : 42- 69: cstap FnkvV-LRrLFMSRthRPPMSVSRMIRkM klpgr RL18_SALSA : 42- 69: cstap Fnk-VvLRrLFMSRthRPPMSVSRMIRkM klpgr RL18_YEAST : 44- 71: rtdap FnkvV-LKaLFLSKinRPPVSVSRIARaL kqega RL18_YEAST : 44- 71: rtdap Fnk-VvLKaLFLSKinRPPVSVSRIARaL kqega RLNA_XENLA : 42- 69: rtnss FnrvV-LKrLFMSRtnRPPLSMSRLIRkM klprr RLNA_XENLA : 42- 69: rtnss Fnr-VvLKrLFMSRtnRPPLSMSRLIRkM klprr RLNB_XENLA : 42- 69: rtnss FnrvV-LKrLFMSRtnRPPLSMSRLIRkM klqgr RLNB_XENLA : 42- 69: rtnss Fnr-VvLKrLFMSRtnRPPLSMSRLIRkM klqgr K 11: 70.4566 8( 8) F-N-x-V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 44- 71: rtnsk FNgVILKrLFMSKvnRaPlslSRLVEfM tgked RL18_HUMAN : 42- 69: rtnst FNqVVLKrLFMSRtnRpPlslSRMIRkM klpgr RL18_MOUSE : 42- 69: rtnst FNqVVLKrLFMSRtnRsPlslSRMIRkM klpgr RL18_RAT : 42- 69: rtnst FNqVVLKrLFMSRtnRpPlslSRMIRkM klpgr RL18_SALSA : 42- 69: cstap FNkVVLRrLFMSRthRpPmsvSRMIRkM klpgr RL18_YEAST : 44- 71: rtdap FNkVVLKaLFLSKinRpPvsvSRIARaL kqega RLNA_XENLA : 42- 69: rtnss FNrVVLKrLFMSRtnRpPlsmSRLIRkM klprr RLNB_XENLA : 42- 69: rtnss FNrVVLKrLFMSRtnRpPlsmSRLIRkM klqgr L 12: 66.3925 8( 8) T-x(2,3)-F-N-x-V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-[LP]-x(2)-[SV]-[RS]-x-[IMV] Occurences: 8(8) RL18_ARATH : 40- 68: flvrr TnskFNgVILKrLFMSKvnRaPLslSRlV efmtg RL18_HUMAN : 38- 66: flarr TnstFNqVVLKrLFMSRtnRpPLslSRmI rkmkl RL18_MOUSE : 38- 66: flarr TnstFNqVVLKrLFMSRtnRsPLslSRmI rkmkl RL18_RAT : 38- 66: flarr TnstFNqVVLKrLFMSRtnRpPLslSRmI rkmkl RL18_SALSA : 39- 65: gskcs Tap-FNkVVLRrLFMSRthR-PPmsVSrM irkmk RL18_YEAST : 40- 67: flarr TdapFNkVVLKaLFLSKinR-PPvsVSrI aralk RLNA_XENLA : 38- 66: flarr TnssFNrVVLKrLFMSRtnRpPLsmSRlI rkmkl RLNB_XENLA : 38- 66: flarr TnssFNrVVLKrLFMSRtnRpPLsmSRlI rkmkl M 13: 66.2865 8( 8) N-x-V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 45- 71: tnskf NgVILKrLFMSKvnRaPlslSRLVEfM tgked RL18_HUMAN : 43- 69: tnstf NqVVLKrLFMSRtnRpPlslSRMIRkM klpgr RL18_MOUSE : 43- 69: tnstf NqVVLKrLFMSRtnRsPlslSRMIRkM klpgr RL18_RAT : 43- 69: tnstf NqVVLKrLFMSRtnRpPlslSRMIRkM klpgr RL18_SALSA : 43- 69: stapf NkVVLRrLFMSRthRpPmsvSRMIRkM klpgr RL18_YEAST : 45- 71: tdapf NkVVLKaLFLSKinRpPvsvSRIARaL kqega RLNA_XENLA : 43- 69: tnssf NrVVLKrLFMSRtnRpPlsmSRLIRkM klprr RLNB_XENLA : 43- 69: tnssf NrVVLKrLFMSRtnRpPlsmSRLIRkM klqgr N 14: 66.2709 8( 8) L-[RS]-[AG]-P-[KR]-x-[AGS]-R-x(1,2)-V-x(1,2)-H-F-[AG]-x-[AGV]-P-x(2)-[GP]-x-[AST]-x(3)-[LPV]-x-[STV]-x(4)-[ER]-[KR]-x-[ERS] Occurences: 8(8) RL18_ARATH : 138- 174: qntvl LRGPKnSReaVk-HFGpAPgvPhShskPyVrakgRKfE kargk RL18_HUMAN : 138- 174: cgtvl LSGPRkGRe-VyrHFGkAPgtPhShtkPyVrskgRKfE rargr RL18_MOUSE : 138- 174: rgtvl LSGPRkGRd-VfpHFGkVPgtPySqtkPyVrskgRRlE rargr RL18_RAT : 138- 174: rgtvl LSGPRkGRe-VyrHFGkAPgtPhShtkPyVrskgRKfE rargr RL18_SALSA : 137- 173: qksvl LSAPRnARd-VsrHFAnAPsiPhTkpyVlSnklrRRgS kltyn RL18_YEAST : 140- 176: qntli LRGPRnSReaVr-HFGmGPhkGkApriLsTgrkfERaR grrrs RLNA_XENLA : 138- 174: qntvl LSGPRkARe-VyrHFGkAPstPhSrtkPyVlskgRKfE rargr RLNB_XENLA : 138- 174: qntvl LSGPRkARe-VyrHFGkAPstPhSrtkPyVlskgRKfE rargr O 15: 64.9370 8( 8) L-x(2)-L-F-[LM]-S-[KR]-x(2)-R-[APS]-P-[LMV]-S-[LMV]-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 49- 71: fngvi LkrLFMSKvnRAPLSLSRLVEfM tgked RL18_HUMAN : 47- 69: fnqvv LkrLFMSRtnRPPLSLSRMIRkM klpgr RL18_MOUSE : 47- 69: fnqvv LkrLFMSRtnRSPLSLSRMIRkM klpgr RL18_RAT : 47- 69: fnqvv LkrLFMSRtnRPPLSLSRMIRkM klpgr RL18_SALSA : 47- 69: fnkvv LrrLFMSRthRPPMSVSRMIRkM klpgr RL18_YEAST : 49- 71: fnkvv LkaLFLSKinRPPVSVSRIARaL kqega RLNA_XENLA : 47- 69: fnrvv LkrLFMSRtnRPPLSMSRLIRkM klprr RLNB_XENLA : 47- 69: fnrvv LkrLFMSRtnRPPLSMSRLIRkM klqgr P 16: 64.4370 8( 8) L-x(1,2)-L-F-[LM]-S-[KR]-x(2)-R-[APS]-P-[LMV]-S-[LMV]-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 49- 71: fngvi LkrLFMSKvnRAPLSLSRLVEfM tgked RL18_HUMAN : 47- 69: fnqvv LkrLFMSRtnRPPLSLSRMIRkM klpgr RL18_MOUSE : 47- 69: fnqvv LkrLFMSRtnRSPLSLSRMIRkM klpgr RL18_RAT : 47- 69: fnqvv LkrLFMSRtnRPPLSLSRMIRkM klpgr RL18_SALSA : 47- 69: fnkvv LrrLFMSRthRPPMSVSRMIRkM klpgr RL18_YEAST : 49- 71: fnkvv LkaLFLSKinRPPVSVSRIARaL kqega RLNA_XENLA : 47- 69: fnrvv LkrLFMSRtnRPPLSMSRLIRkM klprr RLNB_XENLA : 47- 69: fnrvv LkrLFMSRtnRPPLSMSRLIRkM klqgr Q 17: 62.1165 8( 8) V-[IV]-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 47- 71: skfng VILKrLFMSKvnRaPlslSRLVEfM tgked RL18_HUMAN : 45- 69: stfnq VVLKrLFMSRtnRpPlslSRMIRkM klpgr RL18_MOUSE : 45- 69: stfnq VVLKrLFMSRtnRsPlslSRMIRkM klpgr RL18_RAT : 45- 69: stfnq VVLKrLFMSRtnRpPlslSRMIRkM klpgr RL18_SALSA : 45- 69: apfnk VVLRrLFMSRthRpPmsvSRMIRkM klpgr RL18_YEAST : 47- 71: apfnk VVLKaLFLSKinRpPvsvSRIARaL kqega RLNA_XENLA : 45- 69: ssfnr VVLKrLFMSRtnRpPlsmSRLIRkM klprr RLNB_XENLA : 45- 69: ssfnr VVLKrLFMSRtnRpPlsmSRLIRkM klqgr R 18: 55.7115 8( 8) P-[KR]-x-[AGS]-R-x(1,2)-V-x(1,2)-H-F-[AG]-x-[AGV]-P-x(2)-[GP]-x-[AST]-x(3)-[LPV]-x-[STV]-x(4)-[ER]-[KR]-x-[ERS] Occurences: 8(8) RL18_ARATH : 141- 174: vllrg PKnSReaVk-HFGpAPgvPhShskPyVrakgRKfE kargk RL18_HUMAN : 141- 174: vllsg PRkGRe-VyrHFGkAPgtPhShtkPyVrskgRKfE rargr RL18_MOUSE : 141- 174: vllsg PRkGRd-VfpHFGkVPgtPySqtkPyVrskgRRlE rargr RL18_RAT : 141- 174: vllsg PRkGRe-VyrHFGkAPgtPhShtkPyVrskgRKfE rargr RL18_SALSA : 140- 173: vllsa PRnARd-VsrHFAnAPsiPhTkpyVlSnklrRRgS kltyn RL18_YEAST : 143- 176: lilrg PRnSReaVr-HFGmGPhkGkApriLsTgrkfERaR grrrs RLNA_XENLA : 141- 174: vllsg PRkARe-VyrHFGkAPstPhSrtkPyVlskgRKfE rargr RLNB_XENLA : 141- 174: vllsg PRkARe-VyrHFGkAPstPhSrtkPyVlskgRKfE rargr S 19: 54.7216 8( 8) L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-x(2,3)-S-R-[ILM]-[AIV]-[ER]-x-[LM] Occurences: 8(8) RL18_ARATH : 49- 71: fngvi LKrLFMSKvnRaPlslSRLVEfM tgked RL18_HUMAN : 47- 69: fnqvv LKrLFMSRtnRpPlslSRMIRkM klpgr RL18_MOUSE : 47- 69: fnqvv LKrLFMSRtnRsPlslSRMIRkM klpgr RL18_RAT : 47- 69: fnqvv LKrLFMSRtnRpPlslSRMIRkM klpgr RL18_SALSA : 47- 69: fnkvv LRrLFMSRthRpPmsvSRMIRkM klpgr RL18_YEAST : 49- 71: fnkvv LKaLFLSKinRpPvsvSRIARaL kqega RLNA_XENLA : 47- 69: fnrvv LKrLFMSRtnRpPlsmSRLIRkM klprr RLNB_XENLA : 47- 69: fnrvv LKrLFMSRtnRpPlsmSRLIRkM klqgr T 20: 50.6575 15( 8) V-x(0,1)-L-[KR]-x-L-F-[LM]-S-[KR]-x(2)-R-x(0,1)-P-[LP]-x(2)-[SV]-[RS]-x-[IMV] Occurences: 15(8) RL18_ARATH : 47- 68: skfng ViLKrLFMSKvnRaPLslSRlV efmtg RL18_HUMAN : 45- 66: stfnq VvLKrLFMSRtnRpPLslSRmI rkmkl RL18_HUMAN : 46- 66: tfnqv V-LKrLFMSRtnRpPLslSRmI rkmkl RL18_MOUSE : 45- 66: stfnq VvLKrLFMSRtnRsPLslSRmI rkmkl RL18_MOUSE : 46- 66: tfnqv V-LKrLFMSRtnRsPLslSRmI rkmkl RL18_RAT : 45- 66: stfnq VvLKrLFMSRtnRpPLslSRmI rkmkl RL18_RAT : 46- 66: tfnqv V-LKrLFMSRtnRpPLslSRmI rkmkl RL18_SALSA : 45- 65: apfnk VvLRrLFMSRthR-PPmsVSrM irkmk RL18_SALSA : 46- 65: pfnkv V-LRrLFMSRthR-PPmsVSrM irkmk RL18_YEAST : 47- 67: apfnk VvLKaLFLSKinR-PPvsVSrI aralk RL18_YEAST : 48- 67: pfnkv V-LKaLFLSKinR-PPvsVSrI aralk RLNA_XENLA : 45- 66: ssfnr VvLKrLFMSRtnRpPLsmSRlI rkmkl RLNA_XENLA : 46- 66: sfnrv V-LKrLFMSRtnRpPLsmSRlI rkmkl RLNB_XENLA : 45- 66: ssfnr VvLKrLFMSRtnRpPLsmSRlI rkmkl RLNB_XENLA : 46- 66: sfnrv V-LKrLFMSRtnRpPLsmSRlI rkmkl Number of patterns evaluated by Pratt:4240 Total running time: 2 seconds