------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 8 sequences from file RIBOSOMAL_L13E PATTERN CONSERVATION: CM: min Nr of Seqs to Match 8 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBOSOMAL_L13E.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: R131_BRANA 206 R132_BRANA 206 RL13_ARATH 206 RL13_CHICK 210 RL13_DROME 218 RL13_HUMAN 210 RL13_RAT 210 RL13_YEAST 199 Pratt run started at Thu Feb 6 21:05:40 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 99.0812 8( 8) R-x-G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y 2: 99.0812 8( 8) K-x-R-x-G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K 3: 94.9112 8( 8) G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K 4: 94.9112 8( 8) G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y 5: 94.9112 8( 8) R-P-x(0,1)-V-x(3,4)-T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(3)-A-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N 6: 94.4112 13( 8) R-x(0,1)-G-x(0,2)-F-x-L-x-E-x(3)-A-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y 7: 91.2411 8( 8) P-R-P-x(4,5)-R-P-x-V-x(3)-T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(3)-A-G-x(5)-A-x-T-I-G-I 8: 90.7411 10( 8) E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K-x(3)-F-P 9: 90.7411 8( 8) F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K 10: 90.7411 8( 8) Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q 11: 90.7411 8( 8) V-x(3)-T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E 12: 87.0711 8( 8) R-P-x(4,5)-R-P-x-V-x(3)-T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(3)-A-G-x(5)-A-x-T-I-G-I 13: 86.5711 8( 8) L-x(4,5)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K-x(3)-F 14: 86.5711 8( 8) T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E 15: 86.5711 8( 8) P-x(5)-T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(2,3)-A-x(0,1)-G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N 16: 85.5711 8( 8) G-x(5)-A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K-x(0,2)-I-x(0,2)-F-P 17: 85.5711 8( 8) A-G-x(3,5)-A-x(1,3)-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K-x(3)-F-P 18: 81.4010 8( 8) A-x-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K-x(0,2)-I-x(0,2)-F-P 19: 78.2310 9( 8) A-x(1,3)-T-I-G-I-x(2)-D-x-R-R-x-N-x(3)-E-x(4)-N-x-Q-R-L-K-x-Y-x(2)-K-x(3)-F-P 20: 78.2310 9( 8) A-x(3,4)-P-R-P-x(4,5)-R-P-x-V-x(3)-T-x(2)-Y-x(2)-K-x-R-x-G-x-G-F-x-L-x-E-x(3)-A-G-x(5)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 137.8613 8( 8) P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR] B 2: 137.8577 8( 8) V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E C 3: 137.6332 8( 8) K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K D 4: 137.6245 8( 8) R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y E 5: 135.1822 8( 8) P-R-P-x(4,5)-R-P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I F 6: 134.1912 8( 8) R-P-x(4,5)-R-P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I-[AS] G 7: 132.9402 13( 8) R-x(0,1)-G-x(0,2)-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y H 8: 132.9333 8( 8) R-P-x(0,1)-V-x(3,4)-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N I 9: 130.2565 8( 8) G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y J 10: 129.6126 8( 8) G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K K 11: 129.2931 8( 8) Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q L 12: 128.7292 8( 8) F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL] M 13: 128.2151 10( 8) E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F-P N 14: 127.8082 8( 8) T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ] O 15: 124.0451 8( 8) L-x(4,5)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F P 16: 122.1720 9( 8) A-x(3,4)-P-R-P-x(4,5)-R-P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A Q 17: 119.7585 8( 8) A-G-x(3,5)-A-x(1,3)-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F-P R 18: 113.8718 8( 8) G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-x(0,2)-I-x(0,2)-F-P S 19: 112.4184 9( 8) A-x(1,3)-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F-P T 20: 106.4151 8( 8) A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-x(0,2)-I-x(0,2)-F-P Best patterns with alignements: fitness hits(seqs) Pattern A 1: 137.8613 8( 8) P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR] Occurences: 8(8) R131_BRANA : 55- 103: agplr PVVHGQTLKYnmKVRTGKGFTLEElksA-GIpkklApTIGIAVDhRRkNR slegl R132_BRANA : 55- 103: agplr PVVHGQTLKYnmKVRTGKGFTLEElkaA-GIpkklApTIGISLDhRRkNR slegl R132_BRANA : 55- 103: agplr PVVHGQTLKYnmKVRTGKGFTLEElk-AaGIpkklApTIGISLDhRRkNR slegl RL13_ARATH : 55- 103: sgplr PVVHGQTLKYnmKVRTGKGFTLEElkaA-GIpkklApTIGIAVDhRRkNR slegl RL13_ARATH : 55- 103: sgplr PVVHGQTLKYnmKVRTGKGFTLEElk-AaGIpkklApTIGIAVDhRRkNR slegl RL13_CHICK : 56- 104: agpir PIVRCPTVRYhkKVRAGRGFSLEElklA-GInkrfArTIGISVDpRRrNK stesl RL13_DROME : 56- 104: sgalr PVVRCPTIRYhtKLRAGRGFTLEElkgA-GIganfAkTIGIAVDrRRkNK slesr RL13_HUMAN : 56- 104: sgpir PIVRCPTVRYhtKVRAGRGFSLEElrvA-GIhkkvArTIGISVDpRRrNK stesl RL13_RAT : 56- 104: sgpir PIVRCPTVRYhtKVRAGRGFSLEElrvA-GIhkkmArTIGISVDpRRrNK stesl RL13_YEAST : 56- 104: ldllr PVVRAPTVKYnrKVRAGRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNR nqeif RL13_YEAST : 56- 104: ldllr PVVRAPTVKYnrKVRAGRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNR nqeif B 2: 137.8577 8( 8) V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E Occurences: 8(8) R131_BRANA : 57- 106: plrpv VHGQTLKYnmKVRTGKGFTLEElksA-GIpkklApTIGIAVDhRRkNRSlE glqsn R132_BRANA : 57- 106: plrpv VHGQTLKYnmKVRTGKGFTLEElkaA-GIpkklApTIGISLDhRRkNRSlE glqsn R132_BRANA : 57- 106: plrpv VHGQTLKYnmKVRTGKGFTLEElk-AaGIpkklApTIGISLDhRRkNRSlE glqsn RL13_ARATH : 57- 106: plrpv VHGQTLKYnmKVRTGKGFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlE glqtn RL13_ARATH : 57- 106: plrpv VHGQTLKYnmKVRTGKGFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlE glqtn RL13_CHICK : 58- 107: pirpi VRCPTVRYhkKVRAGRGFSLEElklA-GInkrfArTIGISVDpRRrNKStE slqan RL13_DROME : 58- 107: alrpv VRCPTIRYhtKLRAGRGFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlE srqrn RL13_HUMAN : 58- 107: pirpi VRCPTVRYhtKVRAGRGFSLEElrvA-GIhkkvArTIGISVDpRRrNKStE slqtn RL13_RAT : 58- 107: pirpi VRCPTVRYhtKVRAGRGFSLEElrvA-GIhkkmArTIGISVDpRRrNKStE slqan RL13_YEAST : 58- 107: llrpv VRAPTVKYnrKVRAGRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqE ifdan RL13_YEAST : 58- 107: llrpv VRAPTVKYnrKVRAGRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqE ifdan C 3: 137.6332 8( 8) K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K Occurences: 8(8) R131_BRANA : 67- 116: lkynm KVRTGKGFTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLK tykak R132_BRANA : 67- 116: lkynm KVRTGKGFTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLK tykak R132_BRANA : 67- 116: lkynm KVRTGKGFTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLK tykak RL13_ARATH : 67- 116: lkynm KVRTGKGFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLK tyktk RL13_ARATH : 67- 116: lkynm KVRTGKGFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLK tyktk RL13_CHICK : 68- 117: vryhk KVRAGRGFSLEElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLK eyrsk RL13_DROME : 68- 117: iryht KLRAGRGFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLK eyrsk RL13_HUMAN : 68- 117: vryht KVRAGRGFSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLK eyrsk RL13_RAT : 68- 117: vryht KVRAGRGFSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLK eyrsk RL13_YEAST : 68- 117: vkynr KVRAGRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLK eyqsk RL13_YEAST : 68- 117: vkynr KVRAGRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLK eyqsk D 4: 137.6245 8( 8) R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y Occurences: 8(8) R131_BRANA : 69- 118: ynmkv RTGKGFTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTY kaklv R132_BRANA : 69- 118: ynmkv RTGKGFTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTY kaklv R132_BRANA : 69- 118: ynmkv RTGKGFTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTY kaklv RL13_ARATH : 69- 118: ynmkv RTGKGFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTY ktklv RL13_ARATH : 69- 118: ynmkv RTGKGFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTY ktklv RL13_CHICK : 70- 119: yhkkv RAGRGFSLEElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_DROME : 70- 119: yhtkl RAGRGFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEY rskli RL13_HUMAN : 70- 119: yhtkv RAGRGFSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEY rskli RL13_RAT : 70- 119: yhtkv RAGRGFSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_YEAST : 70- 119: ynrkv RAGRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEY qskii RL13_YEAST : 70- 119: ynrkv RAGRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEY qskii E 5: 135.1822 8( 8) P-R-P-x(4,5)-R-P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I Occurences: 8(8) R131_BRANA : 46- 94: avkif PRPtagplRPVVHGQTLKYnmKVRTGKGFTLEELKsAGIpkklApTIGI avdhr R132_BRANA : 46- 94: avkif PRPtagplRPVVHGQTLKYnmKVRTGKGFTLEELKaAGIpkklApTIGI sldhr RL13_ARATH : 46- 94: avkif PRPtsgplRPVVHGQTLKYnmKVRTGKGFTLEELKaAGIpkklApTIGI avdhr RL13_CHICK : 47- 95: arria PRPvagpiRPIVRCPTVRYhkKVRAGRGFSLEELKlAGInkrfArTIGI svdpr RL13_DROME : 47- 95: akavf PRPasgalRPVVRCPTIRYhtKLRAGRGFTLEELKgAGIganfAkTIGI avdrr RL13_HUMAN : 47- 95: arria PRPasgpiRPIVRCPTVRYhtKVRAGRGFSLEELRvAGIhkkvArTIGI svdpr RL13_RAT : 47- 95: arria PRPasgpiRPIVRCPTVRYhtKVRAGRGFSLEELRvAGIhkkmArTIGI svdpr RL13_YEAST : 48- 95: aakia PRPldll-RPVVRAPTVKYnrKVRAGRGFTLAEVKaAGLtaayArTIGI avdhr F 6: 134.1912 8( 8) R-P-x(4,5)-R-P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I-[AS] Occurences: 8(8) R131_BRANA : 47- 95: vkifp RPtagplRPVVHGQTLKYnmKVRTGKGFTLEELKsAGIpkklApTIGIA vdhrr R132_BRANA : 47- 95: vkifp RPtagplRPVVHGQTLKYnmKVRTGKGFTLEELKaAGIpkklApTIGIS ldhrr RL13_ARATH : 47- 95: vkifp RPtsgplRPVVHGQTLKYnmKVRTGKGFTLEELKaAGIpkklApTIGIA vdhrr RL13_CHICK : 48- 96: rriap RPvagpiRPIVRCPTVRYhkKVRAGRGFSLEELKlAGInkrfArTIGIS vdprr RL13_DROME : 48- 96: kavfp RPasgalRPVVRCPTIRYhtKLRAGRGFTLEELKgAGIganfAkTIGIA vdrrr RL13_HUMAN : 48- 96: rriap RPasgpiRPIVRCPTVRYhtKVRAGRGFSLEELRvAGIhkkvArTIGIS vdprr RL13_RAT : 48- 96: rriap RPasgpiRPIVRCPTVRYhtKVRAGRGFSLEELRvAGIhkkmArTIGIS vdprr RL13_YEAST : 49- 96: akiap RPldll-RPVVRAPTVKYnrKVRAGRGFTLAEVKaAGLtaayArTIGIA vdhrr G 7: 132.9402 13( 8) R-x(0,1)-G-x(0,2)-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y Occurences: 13(8) R131_BRANA : 69- 118: ynmkv RtGkgFTLEELKsAGIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTY kaklv R132_BRANA : 69- 118: ynmkv RtGkgFTLEELKaAGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTY kaklv RL13_ARATH : 69- 118: ynmkv RtGkgFTLEELKaAGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTY ktklv RL13_CHICK : 70- 119: yhkkv RaGrgFSLEELKlAGInkrfArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_CHICK : 73- 119: kvrag R-G--FSLEELKlAGInkrfArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_DROME : 70- 119: yhtkl RaGrgFTLEELKgAGIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEY rskli RL13_DROME : 73- 119: klrag R-G--FTLEELKgAGIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEY rskli RL13_HUMAN : 70- 119: yhtkv RaGrgFSLEELRvAGIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEY rskli RL13_HUMAN : 73- 119: kvrag R-G--FSLEELRvAGIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEY rskli RL13_RAT : 70- 119: yhtkv RaGrgFSLEELRvAGIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_RAT : 73- 119: kvrag R-G--FSLEELRvAGIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_YEAST : 70- 119: ynrkv RaGrgFTLAEVKaAGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEY qskii RL13_YEAST : 73- 119: kvrag R-G--FTLAEVKaAGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEY qskii H 8: 132.9333 8( 8) R-P-x(0,1)-V-x(3,4)-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N Occurences: 8(8) R131_BRANA : 54- 102: tagpl RPvVhgq-TLKYnmKVRTGKGFTLEELKsAGIpkklApTIGIAVDhRRkN rsleg R131_BRANA : 54- 102: tagpl RP-VvhgqTLKYnmKVRTGKGFTLEELKsAGIpkklApTIGIAVDhRRkN rsleg R132_BRANA : 54- 102: tagpl RPvVhgq-TLKYnmKVRTGKGFTLEELKaAGIpkklApTIGISLDhRRkN rsleg R132_BRANA : 54- 102: tagpl RP-VvhgqTLKYnmKVRTGKGFTLEELKaAGIpkklApTIGISLDhRRkN rsleg RL13_ARATH : 54- 102: tsgpl RPvVhgq-TLKYnmKVRTGKGFTLEELKaAGIpkklApTIGIAVDhRRkN rsleg RL13_ARATH : 54- 102: tsgpl RP-VvhgqTLKYnmKVRTGKGFTLEELKaAGIpkklApTIGIAVDhRRkN rsleg RL13_CHICK : 55- 103: vagpi RPiVrcp-TVRYhkKVRAGRGFSLEELKlAGInkrfArTIGISVDpRRrN kstes RL13_DROME : 55- 103: asgal RPvVrcp-TIRYhtKLRAGRGFTLEELKgAGIganfAkTIGIAVDrRRkN ksles RL13_DROME : 55- 103: asgal RP-VvrcpTIRYhtKLRAGRGFTLEELKgAGIganfAkTIGIAVDrRRkN ksles RL13_HUMAN : 55- 103: asgpi RPiVrcp-TVRYhtKVRAGRGFSLEELRvAGIhkkvArTIGISVDpRRrN kstes RL13_RAT : 55- 103: asgpi RPiVrcp-TVRYhtKVRAGRGFSLEELRvAGIhkkmArTIGISVDpRRrN kstes RL13_YEAST : 55- 103: pldll RPvVrap-TVKYnrKVRAGRGFTLAEVKaAGLtaayArTIGIAVDhRRqN rnqei RL13_YEAST : 55- 103: pldll RP-VvrapTVKYnrKVRAGRGFTLAEVKaAGLtaayArTIGIAVDhRRqN rnqei I 9: 130.2565 8( 8) G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y Occurences: 8(8) R131_BRANA : 71- 118: mkvrt GKGFTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTY kaklv R132_BRANA : 71- 118: mkvrt GKGFTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTY kaklv R132_BRANA : 71- 118: mkvrt GKGFTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTY kaklv RL13_ARATH : 71- 118: mkvrt GKGFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTY ktklv RL13_ARATH : 71- 118: mkvrt GKGFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTY ktklv RL13_CHICK : 72- 119: kkvra GRGFSLEElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_DROME : 72- 119: tklra GRGFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEY rskli RL13_HUMAN : 72- 119: tkvra GRGFSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEY rskli RL13_RAT : 72- 119: tkvra GRGFSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEY rskli RL13_YEAST : 72- 119: rkvra GRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEY qskii RL13_YEAST : 72- 119: rkvra GRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEY qskii J 10: 129.6126 8( 8) G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K Occurences: 8(8) R131_BRANA : 73- 121: vrtgk GFTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTYkAK lvifp R132_BRANA : 73- 121: vrtgk GFTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAK lvifp R132_BRANA : 73- 121: vrtgk GFTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAK lvifp RL13_ARATH : 73- 121: vrtgk GFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTK lvifp RL13_ARATH : 73- 121: vrtgk GFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTK lvifp RL13_CHICK : 74- 122: vragr GFSLEElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEYrSK lilfp RL13_DROME : 74- 122: lragr GFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEYrSK lilfp RL13_HUMAN : 74- 122: vragr GFSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEYrSK lilfp RL13_RAT : 74- 122: vragr GFSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEYrSK lilfp RL13_YEAST : 74- 122: vragr GFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSK iivfp RL13_YEAST : 74- 122: vragr GFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSK iivfp K 11: 129.2931 8( 8) Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q Occurences: 8(8) R131_BRANA : 64- 113: gqtlk YnmKVRTGKGFTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQ rlkty R132_BRANA : 64- 113: gqtlk YnmKVRTGKGFTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQ rlkty R132_BRANA : 64- 113: gqtlk YnmKVRTGKGFTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQ rlkty RL13_ARATH : 64- 113: gqtlk YnmKVRTGKGFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQ rlkty RL13_ARATH : 64- 113: gqtlk YnmKVRTGKGFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQ rlkty RL13_CHICK : 65- 114: cptvr YhkKVRAGRGFSLEElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQ rlkey RL13_DROME : 65- 114: cptir YhtKLRAGRGFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQ rlkey RL13_HUMAN : 65- 114: cptvr YhtKVRAGRGFSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQ rlkey RL13_RAT : 65- 114: cptvr YhtKVRAGRGFSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQ rlkey RL13_YEAST : 65- 114: aptvk YnrKVRAGRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQ rlkey RL13_YEAST : 65- 114: aptvk YnrKVRAGRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQ rlkey L 12: 128.7292 8( 8) F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL] Occurences: 8(8) R131_BRANA : 74- 122: rtgkg FTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTYkAKL vifpr R132_BRANA : 74- 122: rtgkg FTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKL vifpr R132_BRANA : 74- 122: rtgkg FTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKL vifpr RL13_ARATH : 74- 122: rtgkg FTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKL vifpr RL13_ARATH : 74- 122: rtgkg FTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKL vifpr RL13_CHICK : 75- 123: ragrg FSLEElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEYrSKL ilfpr RL13_DROME : 75- 123: ragrg FTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKL ilfpi RL13_HUMAN : 75- 123: ragrg FSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEYrSKL ilfpr RL13_RAT : 75- 123: ragrg FSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEYrSKL ilfpr RL13_YEAST : 75- 123: ragrg FTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKI ivfpr RL13_YEAST : 75- 123: ragrg FTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKI ivfpr M 13: 128.2151 10( 8) E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F-P Occurences: 10(8) R131_BRANA : 78- 126: gftle ElksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark R132_BRANA : 77- 126: kgftl EelkAaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark R132_BRANA : 78- 126: gftle ElkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark R132_BRANA : 78- 126: gftle Elk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark RL13_ARATH : 77- 126: kgftl EelkAaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIFP rrark RL13_ARATH : 78- 126: gftle ElkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIFP rrark RL13_ARATH : 78- 126: gftle Elk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIFP rrark RL13_CHICK : 79- 127: gfsle ElklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEYrSKLILFP rkpsa RL13_DROME : 79- 127: gftle ElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKLILFP inekk RL13_HUMAN : 79- 127: gfsle ElrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEYrSKLILFP rkpsa RL13_RAT : 79- 127: gfsle ElrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEYrSKLILFP rkpsa RL13_YEAST : 79- 127: gftla EvkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVFP rdgka RL13_YEAST : 79- 127: gftla Evk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVFP rdgka N 14: 127.8082 8( 8) T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-x(2,3)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ] Occurences: 8(8) R131_BRANA : 61- 109: vvhgq TLKYnmKVRTGKGFTLEElksA-GIpkklApTIGIAVDhRRkNRSlEglQ snvqr R132_BRANA : 61- 109: vvhgq TLKYnmKVRTGKGFTLEElkaA-GIpkklApTIGISLDhRRkNRSlEglQ snvqr R132_BRANA : 61- 109: vvhgq TLKYnmKVRTGKGFTLEElk-AaGIpkklApTIGISLDhRRkNRSlEglQ snvqr RL13_ARATH : 61- 109: vvhgq TLKYnmKVRTGKGFTLEElkaA-GIpkklApTIGIAVDhRRkNRSlEglQ tnvqr RL13_ARATH : 61- 109: vvhgq TLKYnmKVRTGKGFTLEElk-AaGIpkklApTIGIAVDhRRkNRSlEglQ tnvqr RL13_CHICK : 62- 110: ivrcp TVRYhkKVRAGRGFSLEElklA-GInkrfArTIGISVDpRRrNKStEslQ anvqr RL13_DROME : 62- 110: vvrcp TIRYhtKLRAGRGFTLEElkgA-GIganfAkTIGIAVDrRRkNKSlEsrQ rniqr RL13_HUMAN : 62- 110: ivrcp TVRYhtKVRAGRGFSLEElrvA-GIhkkvArTIGISVDpRRrNKStEslQ tnvqr RL13_RAT : 62- 110: ivrcp TVRYhtKVRAGRGFSLEElrvA-GIhkkmArTIGISVDpRRrNKStEslQ anvqr RL13_YEAST : 62- 110: vvrap TVKYnrKVRAGRGFTLAEvkaA-GLtaayArTIGIAVDhRRqNRNqEifD anvqr RL13_YEAST : 62- 110: vvrap TVKYnrKVRAGRGFTLAEvk-AaGLtaayArTIGIAVDhRRqNRNqEifD anvqr O 15: 124.0451 8( 8) L-x(4,5)-A-x(0,1)-G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F Occurences: 8(8) R131_BRANA : 76- 125: gkgft LeelksA-GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTYkAKLVIF prrar R132_BRANA : 76- 125: gkgft LeelkaA-GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIF prrar R132_BRANA : 76- 125: gkgft Leelk-AaGIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIF prrar RL13_ARATH : 76- 125: gkgft LeelkaA-GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIF prrar RL13_ARATH : 76- 125: gkgft Leelk-AaGIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIF prrar RL13_CHICK : 77- 126: grgfs LeelklA-GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEYrSKLILF prkps RL13_DROME : 77- 126: grgft LeelkgA-GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKLILF pinek RL13_HUMAN : 77- 126: grgfs LeelrvA-GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEYrSKLILF prkps RL13_RAT : 77- 126: grgfs LeelrvA-GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEYrSKLILF prkps RL13_YEAST : 77- 126: grgft LaevkaA-GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVF prdgk RL13_YEAST : 77- 126: grgft Laevk-AaGLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVF prdgk P 16: 122.1720 9( 8) A-x(3,4)-P-R-P-x(4,5)-R-P-[IV]-V-[HR]-[ACG]-[PQ]-T-[ILV]-[KR]-Y-x(2)-K-[LV]-R-[AT]-G-[KR]-G-F-[ST]-L-[AE]-E-[LV]-[KR]-x-A-G-[IL]-x(4)-A Occurences: 9(8) R131_BRANA : 41- 89: arqkk AvkifPRPtagplRPVVHGQTLKYnmKVRTGKGFTLEELKsAGIpkklA ptigi R132_BRANA : 41- 89: arqkk AvkifPRPtagplRPVVHGQTLKYnmKVRTGKGFTLEELKaAGIpkklA ptigi RL13_ARATH : 41- 89: arqkk AvkifPRPtsgplRPVVHGQTLKYnmKVRTGKGFTLEELKaAGIpkklA ptigi RL13_CHICK : 42- 90: arqak ArriaPRPvagpiRPIVRCPTVRYhkKVRAGRGFSLEELKlAGInkrfA rtigi RL13_DROME : 42- 90: nrvkk AkavfPRPasgalRPVVRCPTIRYhtKLRAGRGFTLEELKgAGIganfA ktigi RL13_HUMAN : 42- 90: arqak ArriaPRPasgpiRPIVRCPTVRYhtKVRAGRGFSLEELRvAGIhkkvA rtigi RL13_RAT : 42- 90: arqak ArriaPRPasgpiRPIVRCPTVRYhtKVRAGRGFSLEELRvAGIhkkmA rtigi RL13_YEAST : 43- 90: araar AakiaPRPldll-RPVVRAPTVKYnrKVRAGRGFTLAEVKaAGLtaayA rtigi RL13_YEAST : 44- 90: raara Akia-PRPldll-RPVVRAPTVKYnrKVRAGRGFTLAEVKaAGLtaayA rtigi Q 17: 119.7585 8( 8) A-G-x(3,5)-A-x(1,3)-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F-P Occurences: 8(8) R131_BRANA : 82- 126: eelks AGipkklAp--TIGIAVDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark R132_BRANA : 82- 126: eelka AGipkklAp--TIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark RL13_ARATH : 82- 126: eelka AGipkklAp--TIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIFP rrark RL13_CHICK : 83- 127: eelkl AGinkrfAr--TIGISVDpRRrNKStEslQaNVQRLKEYrSKLILFP rkpsa RL13_DROME : 83- 127: eelkg AGiganfAk--TIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKLILFP inekk RL13_HUMAN : 83- 127: eelrv AGihkkvAr--TIGISVDpRRrNKStEslQtNVQRLKEYrSKLILFP rkpsa RL13_RAT : 83- 127: eelrv AGihkkmAr--TIGISVDpRRrNKStEslQaNVQRLKEYrSKLILFP rkpsa RL13_YEAST : 83- 127: aevka AGltaayAr--TIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVFP rdgka RL13_YEAST : 83- 127: aevka AGlta--AyarTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVFP rdgka R 18: 113.8718 8( 8) G-[IL]-x(4)-A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-x(0,2)-I-x(0,2)-F-P Occurences: 8(8) R131_BRANA : 83- 126: elksa GIpkklApTIGIAVDhRRkNRSlEglQsNVQRLKTYkAKlvI--FP rrark R132_BRANA : 83- 126: elkaa GIpkklApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKlvI--FP rrark RL13_ARATH : 83- 126: elkaa GIpkklApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKlvI--FP rrark RL13_CHICK : 84- 127: elkla GInkrfArTIGISVDpRRrNKStEslQaNVQRLKEYrSKl-Il-FP rkpsa RL13_DROME : 84- 127: elkga GIganfAkTIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKl-Il-FP inekk RL13_HUMAN : 84- 127: elrva GIhkkvArTIGISVDpRRrNKStEslQtNVQRLKEYrSKl-Il-FP rkpsa RL13_RAT : 84- 127: elrva GIhkkmArTIGISVDpRRrNKStEslQaNVQRLKEYrSKl-Il-FP rkpsa RL13_YEAST : 84- 127: evkaa GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKi-Iv-FP rdgka RL13_YEAST : 84- 127: evkaa GLtaayArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSK--IivFP rdgka S 19: 112.4184 9( 8) A-x(1,3)-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-[IL]-[IV]-[ILV]-F-P Occurences: 9(8) R131_BRANA : 89- 126: ipkkl Ap--TIGIAVDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark R132_BRANA : 89- 126: ipkkl Ap--TIGISLDhRRkNRSlEglQsNVQRLKTYkAKLVIFP rrark RL13_ARATH : 89- 126: ipkkl Ap--TIGIAVDhRRkNRSlEglQtNVQRLKTYkTKLVIFP rrark RL13_CHICK : 90- 127: inkrf Ar--TIGISVDpRRrNKStEslQaNVQRLKEYrSKLILFP rkpsa RL13_DROME : 90- 127: iganf Ak--TIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKLILFP inekk RL13_HUMAN : 90- 127: ihkkv Ar--TIGISVDpRRrNKStEslQtNVQRLKEYrSKLILFP rkpsa RL13_RAT : 90- 127: ihkkm Ar--TIGISVDpRRrNKStEslQaNVQRLKEYrSKLILFP rkpsa RL13_YEAST : 88- 127: aglta AyarTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVFP rdgka RL13_YEAST : 90- 127: ltaay Ar--TIGIAVDhRRqNRNqEifDaNVQRLKEYqSKIIVFP rdgka T 20: 106.4151 8( 8) A-x-T-I-G-I-[AS]-[LV]-D-x-R-R-x-N-[KR]-[NS]-x-E-x(2)-[DQ]-x-N-[IV]-Q-R-L-K-[ET]-Y-x-[AST]-K-x(0,2)-I-x(0,2)-F-P Occurences: 8(8) R131_BRANA : 89- 126: ipkkl ApTIGIAVDhRRkNRSlEglQsNVQRLKTYkAKlvI--FP rrark R132_BRANA : 89- 126: ipkkl ApTIGISLDhRRkNRSlEglQsNVQRLKTYkAKlvI--FP rrark RL13_ARATH : 89- 126: ipkkl ApTIGIAVDhRRkNRSlEglQtNVQRLKTYkTKlvI--FP rrark RL13_CHICK : 90- 127: inkrf ArTIGISVDpRRrNKStEslQaNVQRLKEYrSKl-Il-FP rkpsa RL13_DROME : 90- 127: iganf AkTIGIAVDrRRkNKSlEsrQrNIQRLKEYrSKl-Il-FP inekk RL13_HUMAN : 90- 127: ihkkv ArTIGISVDpRRrNKStEslQtNVQRLKEYrSKl-Il-FP rkpsa RL13_RAT : 90- 127: ihkkm ArTIGISVDpRRrNKStEslQaNVQRLKEYrSKl-Il-FP rkpsa RL13_YEAST : 90- 127: ltaay ArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSKi-Iv-FP rdgka RL13_YEAST : 90- 127: ltaay ArTIGIAVDhRRqNRNqEifDaNVQRLKEYqSK--IivFP rdgka Number of patterns evaluated by Pratt:9230 Total running time: 2 seconds