------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 24 sequences from file RIBORED_LARGE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 24 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 44 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename RIBORED_LARGE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: RIR1_ASFB7 778 RIR1_ASFM2 779 RIR1_BPT4 754 RIR1_CAEEL 788 RIR1_EBV 826 RIR1_ECOLI 761 RIR1_HAEIN 756 RIR1_HCMVA 906 RIR1_HSV11 1137 RIR1_HSV23 109 RIR1_HSVEB 790 RIR1_HSVSA 767 RIR1_HUMAN 792 RIR1_MOUSE 792 RIR1_SALTY 761 RIR1_SCHPO 811 RIR1_VACCC 771 RIR1_VACCV 771 RIR1_VARV 771 RIR1_VZVD 775 RIR1_YEAST 888 RIR3_ECOLI 23 RIR3_SALTY 713 RIR3_YEAST 869 Pratt run started at Thu Feb 6 21:05:32 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 37( 24) L-x(0,1)-T-x(1,2)-M 2: 10.5102 57( 24) G-x(0,2)-T-x(0,2)-L 3: 8.3401 127( 24) L-x-T 4: 8.3401 127( 24) T-L 5: 8.3401 146( 24) T-x(5)-L 6: 8.3401 63( 24) A-P 7: 8.3401 100( 24) A-x(2)-T 8: 8.3401 79( 24) A-x(4)-R 9: 8.3401 79( 24) A-x(4)-P 10: 8.3401 57( 24) A-x(5)-F 11: 8.3401 98( 24) T-A 12: 7.8401 113( 24) T-x(0,1)-E 13: 7.8401 115( 24) L-x(0,1)-P 14: 7.8401 162( 24) I-x(1,2)-L 15: 7.8401 154( 24) I-x(0,1)-L 16: 7.8401 140( 24) I-x(2,3)-T 17: 7.8401 136( 24) G-x(1,2)-T 18: 7.8401 121( 24) G-x(0,1)-T 19: 7.8401 124( 24) R-x(0,1)-G 20: 7.8401 116( 24) R-x(2,3)-T Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 11.5102 37( 24) L-x(0,1)-T-x(1,2)-M B 2: 10.5426 28( 24) A-x(2)-[AGLP]-x(2)-F C 3: 10.5102 57( 24) G-x(0,2)-T-x(0,2)-L D 4: 9.7489 69( 24) R-x(0,1)-G-[AGILV] E 5: 9.4893 86( 24) G-x(1,2)-T-[AGILPV] F 6: 9.4582 73( 24) I-x(0,1)-L-x(2)-[DENQRS] G 7: 9.0786 60( 24) R-x(2,3)-T-x(4)-[ADEGNQST] H 8: 8.3401 127( 24) L-x-T I 9: 8.3401 127( 24) T-L J 10: 8.3401 146( 24) T-x(5)-L K 11: 8.3401 63( 24) A-P L 12: 8.3401 100( 24) A-x(2)-T M 13: 8.3401 79( 24) A-x(4)-R N 14: 8.3401 79( 24) A-x(4)-P O 15: 8.3401 98( 24) T-A P 16: 7.8401 113( 24) T-x(0,1)-E Q 17: 7.8401 115( 24) L-x(0,1)-P R 18: 7.8401 162( 24) I-x(1,2)-L S 19: 7.8401 140( 24) I-x(2,3)-T T 20: 7.8401 121( 24) G-x(0,1)-T Best patterns with alignements: fitness hits(seqs) Pattern A 1: 11.5102 37( 24) L-x(0,1)-T-x(1,2)-M Occurences: 37(24) RIR1_ASFB7 : 608- 612: vrngy L-TalM ptats RIR1_ASFM2 : 609- 613: vrngy L-TalM ptats RIR1_BPT4 : 204- 209: trqis LpTpiM agcrt RIR1_CAEEL : 656- 661: lverg LwTdeM knrli RIR1_CAEEL : 738- 742: gwkkg LkTg-M yylrt RIR1_EBV : 720- 724: syelg LkTi-M yycri RIR1_ECOLI : 207- 212: tfkis LpTpiM sgvrt RIR1_HAEIN : 207- 212: tfkis LpTpiM agvrt RIR1_HAEIN : 616- 620: lrnst L-TalM psets RIR1_HCMVA : 369- 374: dgqls LsTftM stvgf RIR1_HCMVA : 677- 682: igvag LhTalM rlgft RIR1_HSV11 : 1106- 1110: aykrg LkTg-M yyckv RIR1_HSV23 : 78- 82: aykrg LkTg-M yyckv RIR1_HSVEB : 677- 682: arlqa LsTleM aqwsv RIR1_HSVEB : 760- 764: aykrg LkTg-M yycki RIR1_HSVSA : 704- 708: gfrlg LkTi-M yycrv RIR1_HUMAN : 720- 723: pnygk L-Ts-M hfygw RIR1_HUMAN : 732- 736: gwkqg LkTg-M yylrt RIR1_MOUSE : 720- 723: pnygk L-Ts-M hfygw RIR1_MOUSE : 732- 736: gwkqg LkTg-M yylrt RIR1_SALTY : 207- 212: tfkis LpTpiM sgvrt RIR1_SCHPO : 731- 735: gwkkg LkTg-M yylrt RIR1_VACCC : 718- 721: psysk L-Ts-M hfygw RIR1_VACCC : 730- 734: gwslg LkTg-M yylrt RIR1_VACCV : 718- 721: psysk L-Ts-M hfygw RIR1_VACCV : 730- 734: gwslg LkTg-M yylrt RIR1_VARV : 718- 721: psysk L-Ts-M hfygw RIR1_VARV : 730- 734: gwslg LkTg-M yylrt RIR1_VZVD : 305- 310: dlqtv LaTrgM lvrde RIR1_VZVD : 745- 749: aykag LkTg-M yycki RIR1_YEAST : 724- 727: ptmgk L-Ts-M hfygw RIR1_YEAST : 736- 740: gwkkg LkTg-M yylrt RIR1_YEAST : 825- 829: tgshs L-TkgM aelnv RIR3_ECOLI : 17- 22: rrgit LpTreM w RIR3_SALTY : 147- 151: tlatq L-TdeM lsgrf RIR3_SALTY : 559- 564: rsgit LpTreM wlklr RIR3_YEAST : 736- 740: gwkkg LkTg-M yylrt B 2: 10.5426 28( 24) A-x(2)-[AGLP]-x(2)-F Occurences: 28(24) RIR1_ASFB7 : 443- 449: vcnla AvnLaaF ireng RIR1_ASFM2 : 444- 450: vcnla AvnLaaF iress RIR1_BPT4 : 461- 467: lctls AfvLdnF dwqdq RIR1_BPT4 : 518- 524: vtnya AwlAsnF asyed RIR1_CAEEL : 750- 756: lrtkp AvnAvqF tvdkn RIR1_EBV : 50- 56: vthtv AeyLevF sdkfy RIR1_ECOLI : 81- 87: dyqyl AarLaiF hlrkk RIR1_HAEIN : 81- 87: dyqyl AarLaiF hlrkk RIR1_HCMVA : 789- 795: tpsvw AsrGtvF eeetv RIR1_HCMVA : 858- 864: dvema AvnLsvF vdqcv RIR1_HSV11 : 98- 104: qdpga AasPapF vavtn RIR1_HSV11 : 339- 345: vnrep AlmLeyF crcar RIR1_HSV11 : 761- 767: ivrsa AttGspF vmfkd RIR1_HSV23 : 15- 21: pcldp AhpLrrF ktafd RIR1_HSVEB : 486- 492: algra AatAtiF vnsmm RIR1_HSVSA : 442- 448: skley AvqAavF iinac RIR1_HUMAN : 744- 750: lrtrp AanPiqF tlnke RIR1_MOUSE : 744- 750: lrtrp AanPiqF tlnke RIR1_SALTY : 81- 87: dyqyl AarLaiF hlrkk RIR1_SCHPO : 743- 749: lrtma AsaAikF tvdpv RIR1_VACCC : 742- 748: lrtkp AsaPiqF tldkd RIR1_VACCV : 742- 748: lrtkp AsaPiqF tldkd RIR1_VARV : 742- 748: lrtkp AsaPiqF tldkd RIR1_VZVD : 397- 403: iirsa AvtGspF lmfkd RIR1_YEAST : 748- 754: lrtqa AsaAiqF tidqk RIR3_ECOLI : 4- 10: ppt AhvGapF trrgi RIR3_SALTY : 82- 88: arydr AfvLrlF ehaha RIR3_YEAST : 748- 754: lrtqa AsaAiqF tidqe C 3: 10.5102 57( 24) G-x(0,2)-T-x(0,2)-L Occurences: 57(24) RIR1_ASFB7 : 326- 332: qihnr GdgTwyL fspdq RIR1_ASFB7 : 328- 332: hnrgd G--TwyL fspdq RIR1_ASFB7 : 465- 471: lieas GnvTenL dniid RIR1_ASFB7 : 606- 611: qgvrn GylTa-L mptat RIR1_ASFM2 : 327- 333: qihnr GdgTwyL fspdq RIR1_ASFM2 : 329- 333: hnrgd G--TwyL fspdq RIR1_ASFM2 : 466- 472: lieaa GnvTenL dniid RIR1_ASFM2 : 607- 612: qgvrn GylTa-L mptat RIR1_BPT4 : 455- 459: pdaei GlcT--L safvl RIR1_CAEEL : 56- 62: sglyk GvtTveL dnlaa RIR1_CAEEL : 153- 157: sytyf GfkT--L ersyl RIR1_EBV : 284- 289: hercp GifTg-L fvpel RIR1_EBV : 562- 565: whdwa G--Td-L sipre RIR1_ECOLI : 300- 304: ggvrg GaaT--L fypmw RIR1_ECOLI : 509- 513: krgam GrrT--L gigvi RIR1_ECOLI : 725- 729: taykf GvkT--L yyqnt RIR1_HAEIN : 300- 304: ggvrg GaaT--L yypiw RIR1_HAEIN : 725- 729: tayky GlkT--L yyqnt RIR1_HCMVA : 676- 681: higva GlhTa-L mrlgf RIR1_HCMVA : 837- 843: qhqee GkaTqcL fqaap RIR1_HSV11 : 456- 461: valdf Gl-TerL rehea RIR1_HSV11 : 870- 876: gigmq GlhTacL klgld RIR1_HSV11 : 997- 1000: kvtrd Ge-T--L rpntl RIR1_HSV11 : 1087- 1089: tekad G--T--L pastl RIR1_HSV23 : 59- 61: tekad G--T--L pastl RIR1_HSVEB : 523- 529: glgiq GlhTafL mldld RIR1_HSVEB : 590- 593: fdsyp Gv-T--L anrna RIR1_HSVSA : 581- 585: lmpta G--TsqL tgytd RIR1_HUMAN : 50- 56: qglys GvtTveL dtlaa RIR1_HUMAN : 147- 151: synyf GfkT--L ersyl RIR1_MOUSE : 50- 56: qglys GvtTveL dtlaa RIR1_MOUSE : 147- 151: synyf GfkT--L ersyl RIR1_SALTY : 300- 304: ggvrg GaaT--L fypmw RIR1_SALTY : 351- 355: rllkg GdiT--L fspsd RIR1_SALTY : 509- 513: krgam GrrT--L gigvi RIR1_SALTY : 725- 729: taykf GvkT--L yyqnt RIR1_SCHPO : 50- 56: sgvyp GvtTieL dnlaa RIR1_SCHPO : 147- 151: tynff GfkT--L ersyl RIR1_VACCC : 50- 56: qgiyn GvtTveL dtlaa RIR1_VACCC : 147- 151: synyf GfkT--L eksyl RIR1_VACCV : 50- 56: qgiyn GvtTveL dtlaa RIR1_VACCV : 147- 151: synyf GfkT--L eksyl RIR1_VARV : 50- 56: qgiyn GvtTveL dtlta RIR1_VARV : 147- 151: synyf GfkT--L eksyl RIR1_VARV : 295- 301: gnkrp GvmTiyL epwhs RIR1_VZVD : 238- 241: itgdv G--Tv-L qsrgg RIR1_VZVD : 508- 514: gigiq GlhTtcL rlgfd RIR1_YEAST : 50- 56: sgvye GvtTieL dnlaa RIR1_YEAST : 147- 151: qysyf GfkT--L ersyl RIR1_YEAST : 346- 350: rveen GtwT--L fspts RIR1_YEAST : 346- 350: rveen G--TwtL fspts RIR3_ECOLI : 14- 17: pftrr Gi-T--L ptrem RIR3_SALTY : 63- 65: qherl G--T--L vregy RIR3_SALTY : 139- 143: ltlaq GdeT--L atqlt RIR3_SALTY : 556- 559: lfars Gi-T--L ptrem RIR3_YEAST : 50- 56: sgvys GvtTveL dnlaa RIR3_YEAST : 147- 151: qytyf GfkT--L ersyl RIR3_YEAST : 346- 350: rvqed GpwT--L fspsa D 4: 9.7489 69( 24) R-x(0,1)-G-[AGILV] Occurences: 69(24) RIR1_ASFB7 : 266- 269: nqggl RpGA yavyl RIR1_ASFB7 : 458- 460: ngydy R-GL ieasg RIR1_ASFM2 : 267- 270: nqggl RpGA yavyl RIR1_ASFM2 : 459- 461: ssydy R-GL ieaag RIR1_BPT4 : 248- 251: eyisk RaGI ginvg RIR1_BPT4 : 295- 297: sqggi R-GG aatay RIR1_BPT4 : 295- 298: sqggi RgGA atayy RIR1_CAEEL : 299- 302: qggnk RpGA faiyl RIR1_CAEEL : 654- 656: kdlve R-GL wtdem RIR1_CAEEL : 704- 706: emaad R-GA yidqs RIR1_EBV : 215- 218: rylfq RaGV gvgvt RIR1_EBV : 581- 584: seriv RdGL fnsqf RIR1_ECOLI : 251- 254: kyvsq RaGI ginag RIR1_ECOLI : 269- 271: lgspi R-GG eafht RIR1_ECOLI : 298- 300: sqggv R-GG aatlf RIR1_ECOLI : 298- 301: sqggv RgGA atlfy RIR1_ECOLI : 323- 325: vlknn R-GV egnrv RIR1_ECOLI : 505- 507: ipaak R-GA mgrrt RIR1_ECOLI : 735- 738: yyqnt RdGA edaqd RIR1_HAEIN : 251- 254: kyvsq RaGI ginag RIR1_HAEIN : 269- 271: lgsei R-GG eafht RIR1_HAEIN : 298- 300: sqggv R-GG aatly RIR1_HAEIN : 298- 301: sqggv RgGA atlyy RIR1_HAEIN : 323- 325: vlknn R-GV ednrv RIR1_HAEIN : 735- 738: yyqnt RdGA edvqe RIR1_HCMVA : 118- 120: pavps R-GG rvssg RIR1_HSV11 : 492- 494: htlve R-GL qsalk RIR1_HSV11 : 507- 510: efylk RfGG hymes RIR1_HSV11 : 609- 612: saila RnGG iglcv RIR1_HSV11 : 912- 914: nalcv R-GA rpfnh RIR1_HSV11 : 1104- 1106: vhayk R-GL ktgmy RIR1_HSV23 : 76- 78: vhayk R-GL ktgmy RIR1_HSVEB : 149- 151: ylakm R-GG riesm RIR1_HSVEB : 252- 254: pilcn R-GG iglsl RIR1_HSVEB : 252- 255: pilcn RgGI glslq RIR1_HSVEB : 272- 274: kegcs R-GV mallk RIR1_HSVEB : 428- 431: hfdlr RkGA imgsn RIR1_HSVEB : 509- 511: tvksq R-GV denrs RIR1_HSVEB : 758- 760: vhayk R-GL ktgmy RIR1_HSVSA : 220- 223: pllas RsGV gvdvt RIR1_HSVSA : 701- 704: lllgf RlGL ktimy RIR1_HUMAN : 293- 296: qggnk RpGA faiyl RIR1_HUMAN : 648- 650: kdlte R-GL wheem RIR1_HUMAN : 698- 700: kmaae R-GA fidqs RIR1_MOUSE : 293- 296: qggnk RpGA faiyl RIR1_MOUSE : 648- 650: kdlte R-GL wnkem RIR1_MOUSE : 698- 700: kmaae R-GA fidqs RIR1_SALTY : 251- 254: kyvsq RaGI ginag RIR1_SALTY : 269- 271: lgspi R-GG eafht RIR1_SALTY : 298- 300: sqggv R-GG aatlf RIR1_SALTY : 298- 301: sqggv RgGA atlfy RIR1_SALTY : 323- 325: vlknn R-GV egnrv RIR1_SALTY : 505- 507: ipaak R-GA mgrrt RIR1_SALTY : 735- 738: yyqnt RdGA edaqd RIR1_SCHPO : 293- 296: qggnk RpGA faayl RIR1_VACCC : 293- 296: qggnk RpGV maiyl RIR1_VACCC : 696- 698: kmaad R-GA fidqs RIR1_VACCV : 293- 296: qggnk RpGV maiyl RIR1_VACCV : 696- 698: kmaad R-GA fidqs RIR1_VARV : 293- 296: qggnk RpGV mtiyl RIR1_VARV : 696- 698: kmaad R-GA fidqs RIR1_VZVD : 244- 246: tvlqs R-GG vgisl RIR1_VZVD : 244- 247: tvlqs RgGV gislq RIR1_VZVD : 375- 378: ylrle ReGL gvssv RIR1_YEAST : 293- 296: qggnk RpGA falyl RIR3_ECOLI : 12- 15: gapft RrGI tlptr RIR3_ECOLI : 13- 15: apftr R-GI tlptr RIR3_SALTY : 202- 204: lqlsk R-GG gvafl RIR3_SALTY : 202- 205: lqlsk RgGG vafll RIR3_SALTY : 250- 253: nqlga RqGA gavyl RIR3_SALTY : 439- 441: vetai R-GL tavsd RIR3_SALTY : 479- 482: hgyla ReGI aygsp RIR3_SALTY : 554- 557: ralfa RsGI tlptr RIR3_SALTY : 574- 577: rddvm RyGI ynqnl RIR3_SALTY : 684- 687: qiyaw RkGI kslyy RIR3_YEAST : 293- 296: qggnk RpGA falfl E 5: 9.4893 86( 24) G-x(1,2)-T-[AGILPV] Occurences: 86(24) RIR1_ASFB7 : 374- 378: ekryt GvtTA keiik RIR1_ASFB7 : 606- 610: qgvrn GylTA lmpta RIR1_ASFB7 : 741- 745: lgwkk GltTG syych RIR1_ASFM2 : 375- 379: ekryt GvtTA keiik RIR1_ASFM2 : 586- 590: aqttq GvlTP kkwwq RIR1_ASFM2 : 607- 611: qgvrn GylTA lmpta RIR1_ASFM2 : 742- 746: lgwkk GltTG syych RIR1_BPT4 : 211- 215: tpima GcrTP trqfs RIR1_BPT4 : 297- 301: ggirg GaaTA yypiw RIR1_BPT4 : 455- 459: pdaei GlcTL safvl RIR1_CAEEL : 56- 60: sglyk GvtTV eldnl RIR1_CAEEL : 153- 157: sytyf GfkTL ersyl RIR1_CAEEL : 578- 581: qfdmw Gv-TP tdqcd RIR1_CAEEL : 737- 741: ygwkk GlkTG myylr RIR1_EBV : 221- 224: agvgv Gv-TG agqdg RIR1_EBV : 284- 288: hercp GifTG lfvpe RIR1_EBV : 719- 723: rsyel GlkTI myycr RIR1_ECOLI : 214- 218: tpims GvrTP trqfs RIR1_ECOLI : 300- 304: ggvrg GaaTL fypmw RIR1_ECOLI : 509- 513: krgam GrrTL gigvi RIR1_ECOLI : 725- 729: taykf GvkTL yyqnt RIR1_HAEIN : 214- 218: tpima GvrTP trqfs RIR1_HAEIN : 300- 304: ggvrg GaaTL yypiw RIR1_HAEIN : 725- 729: tayky GlkTL yyqnt RIR1_HCMVA : 676- 680: higva GlhTA lmrlg RIR1_HCMVA : 782- 785: vahlw Gv-TP svwas RIR1_HCMVA : 878- 881: fyyds Gm-TP dvlla RIR1_HSV11 : 116- 119: gagsd Gg-TA vvafg RIR1_HSV11 : 124- 127: avvaf Gg-TP rrsag RIR1_HSV11 : 132- 136: prrsa GtsTG tqtad RIR1_HSV11 : 136- 140: agtst GtqTA dvpte RIR1_HSV11 : 307- 311: prprl GtgTA ypvpl RIR1_HSV11 : 624- 628: afnds GpgTA svmpa RIR1_HSV11 : 870- 874: gigmq GlhTA clklg RIR1_HSV11 : 997- 1000: kvtrd Ge-TL rpntl RIR1_HSV11 : 1105- 1109: haykr GlkTG myyck RIR1_HSV23 : 77- 81: haykr GlkTG myyck RIR1_HSVEB : 523- 527: glgiq GlhTA flmld RIR1_HSVEB : 590- 593: fdsyp Gv-TL anrna RIR1_HSVEB : 759- 763: haykr GlkTG myyck RIR1_HSVSA : 703- 707: lgfrl GlkTI myycr RIR1_HUMAN : 50- 54: qglys GvtTV eldtl RIR1_HUMAN : 147- 151: synyf GfkTL ersyl RIR1_HUMAN : 731- 735: ygwkq GlkTG myylr RIR1_MOUSE : 50- 54: qglys GvtTV eldtl RIR1_MOUSE : 147- 151: synyf GfkTL ersyl RIR1_MOUSE : 731- 735: ygwkq GlkTG myylr RIR1_SALTY : 214- 218: tpims GvrTP trqfs RIR1_SALTY : 300- 304: ggvrg GaaTL fypmw RIR1_SALTY : 351- 355: rllkg GdiTL fspsd RIR1_SALTY : 509- 513: krgam GrrTL gigvi RIR1_SALTY : 725- 729: taykf GvkTL yyqnt RIR1_SCHPO : 50- 54: sgvyp GvtTI eldnl RIR1_SCHPO : 147- 151: tynff GfkTL ersyl RIR1_SCHPO : 730- 734: ygwkk GlkTG myylr RIR1_VACCC : 50- 54: qgiyn GvtTV eldtl RIR1_VACCC : 147- 151: synyf GfkTL eksyl RIR1_VACCC : 729- 733: ygwsl GlkTG myylr RIR1_VACCV : 50- 54: qgiyn GvtTV eldtl RIR1_VACCV : 147- 151: synyf GfkTL eksyl RIR1_VACCV : 729- 733: ygwsl GlkTG myylr RIR1_VARV : 50- 54: qgiyn GvtTV eldtl RIR1_VARV : 147- 151: synyf GfkTL eksyl RIR1_VARV : 295- 299: gnkrp GvmTI ylepw RIR1_VARV : 729- 733: ygwsl GlkTG myylr RIR1_VZVD : 207- 211: vmmfl GreTG atasc RIR1_VZVD : 211- 214: lgret Ga-TA scylm RIR1_VZVD : 573- 577: wlhqd GfsTI syldl RIR1_VZVD : 744- 748: rayka GlkTG myyck RIR1_YEAST : 50- 54: sgvye GvtTI eldnl RIR1_YEAST : 147- 151: qysyf GfkTL ersyl RIR1_YEAST : 346- 350: rveen GtwTL fspts RIR1_YEAST : 380- 383: ekegr Gk-TI kaqkl RIR1_YEAST : 735- 739: ygwkk GlkTG myylr RIR3_ECOLI : 14- 17: pftrr Gi-TL ptrem RIR3_SALTY : 139- 143: ltlaq GdeTL atqlt RIR3_SALTY : 431- 434: dspdi Gr-TV etair RIR3_SALTY : 440- 443: etair Gl-TA vsdms RIR3_SALTY : 556- 559: lfars Gi-TL ptrem RIR3_SALTY : 614- 617: eirke Gk-TG rvyyp RIR3_YEAST : 50- 54: sgvys GvtTV eldnl RIR3_YEAST : 147- 151: qytyf GfkTL ersyl RIR3_YEAST : 346- 350: rvqed GpwTL fspsa RIR3_YEAST : 380- 383: eregr Gk-TI kaqkl RIR3_YEAST : 460- 463: evsed Gk-TA synfe RIR3_YEAST : 735- 739: ygwkk GlkTG myylr F 6: 9.4582 73( 24) I-x(0,1)-L-x(2)-[DENQRS] Occurences: 73(24) RIR1_ASFB7 : 46- 50: csalt I-LhyD ystla RIR1_ASFB7 : 161- 166: vnikm IlLtyD llsrh RIR1_ASFB7 : 222- 227: ggggg IgLclS girak RIR1_ASFB7 : 317- 321: dlfme I-LedQ ihnrg RIR1_ASFB7 : 538- 543: amrrs IeLakE kgshp RIR1_ASFB7 : 658- 663: ddlke IdLwtE aiqqq RIR1_ASFM2 : 47- 51: csalt I-LhyD ystla RIR1_ASFM2 : 162- 167: vnmkm IlLtyD llsrh RIR1_ASFM2 : 223- 228: ggggg IgLclS girak RIR1_ASFM2 : 318- 322: dlfme I-LedQ ihnrg RIR1_ASFM2 : 539- 544: amrrs IeLakE kgshp RIR1_ASFM2 : 659- 664: ddlee InLwsE diqqq RIR1_BPT4 : 550- 555: likas IkLakE kgpse RIR1_CAEEL : 507- 512: mrhrp IgLgvQ gladc RIR1_CAEEL : 616- 620: astaq I-LgnN esiep RIR1_EBV : 232- 237: qdgkh IsLlmR minsh RIR1_EBV : 364- 368: agspf I-LlkE acnah RIR1_EBV : 474- 478: vvacs I-LqgS ptyds RIR1_EBV : 534- 539: ctssl IgLhtR kifpg RIR1_ECOLI : 483- 487: leela I-LavR aldal RIR1_ECOLI : 577- 581: tyakg I-LpiD tykkd RIR1_HAEIN : 577- 581: tyakg I-LpiD tykkd RIR1_HCMVA : 301- 305: glyaa I-LclD kvcrq RIR1_HCMVA : 469- 473: rvinf I-LkeS tselt RIR1_HSV11 : 538- 543: rgmrh IaLgrE gswwe RIR1_HSV11 : 606- 610: snvsa I-LarN ggigl RIR1_HSV11 : 613- 618: arngg IgLcvQ afnds RIR1_HSV11 : 1061- 1066: dqkll IdLcaD rapyv RIR1_HSV23 : 33- 38: dqell IdLcaD rapyv RIR1_HSVEB : 248- 252: eeagp I-LcnR ggigl RIR1_HSVEB : 255- 260: cnrgg IgLslQ rfntp RIR1_HSVEB : 312- 316: adira I-LnmR gmlar RIR1_HSVSA : 454- 458: iinac I-LspS ptssa RIR1_HSVSA : 557- 562: pmkqw IhLqdN ikkfg RIR1_HUMAN : 76- 80: hpdya I-LaaR iavsn RIR1_HUMAN : 565- 569: pvskg I-LqyD mwnvt RIR1_HUMAN : 610- 614: astaq I-LgnN esiep RIR1_MOUSE : 76- 80: hpdya I-LaaR iavsn RIR1_MOUSE : 565- 569: pvskg I-LqyD mwnva RIR1_MOUSE : 610- 614: astaq I-LgnN esiep RIR1_SALTY : 483- 487: leela I-LavR aldal RIR1_SALTY : 577- 581: tyakg I-LpiD tykkd RIR1_SCHPO : 76- 80: hpdya I-LaaR iavsn RIR1_SCHPO : 393- 397: kvwya I-LqsQ vetgn RIR1_SCHPO : 564- 568: pciqg I-LqyD mwnvn RIR1_SCHPO : 609- 613: astsq I-LgfN ecfep RIR1_VACCC : 76- 80: hpdya I-LaaR iavsn RIR1_VACCC : 248- 253: kmagg IgLsiS niras RIR1_VACCC : 405- 409: tgtpf I-LykD acnkk RIR1_VACCC : 564- 568: yasng I-LqyD lwnvv RIR1_VACCC : 609- 613: astaq I-LgnN esvep RIR1_VACCV : 76- 80: hpdya I-LaaR iavsn RIR1_VACCV : 248- 253: kmagg IgLsiS niras RIR1_VACCV : 405- 409: tgtpf I-LykD acnkk RIR1_VACCV : 564- 568: yasng I-LqyD lwnvv RIR1_VACCV : 609- 613: astaq I-LgnN esvep RIR1_VARV : 76- 80: hpdya I-LaaR iavsn RIR1_VARV : 248- 253: kmagg IgLsiS niras RIR1_VARV : 405- 409: tgtpf I-LykD acnkk RIR1_VARV : 564- 568: yasng I-LqyD lwnvv RIR1_VARV : 609- 613: astaq I-LgnN esvep RIR1_VZVD : 664- 668: levin I-LekN qwsvi RIR1_YEAST : 392- 396: klwys I-LeaQ tetgt RIR1_YEAST : 505- 510: mrhrp IaLgvQ gladt RIR1_YEAST : 569- 573: pasqg I-LqfD mwdqk RIR1_YEAST : 614- 618: astsq I-LgyN ecfep RIR3_ECOLI : 15- 20: ftrrg ItLptR emw RIR3_SALTY : 390- 394: nlcse I-LqvN sasry RIR3_SALTY : 557- 562: farsg ItLptR emwlk RIR3_YEAST : 392- 396: klwya I-LqaQ tetgt RIR3_YEAST : 505- 510: mkhrp IaLgvQ gladt RIR3_YEAST : 569- 573: paskg I-LqfD mwnak RIR3_YEAST : 614- 618: astsq I-LgyN ecfep G 7: 9.0786 60( 24) R-x(2,3)-T-x(4)-[ADEGNQST] Occurences: 60(24) RIR1_ASFB7 : 170- 179: ydlls RhviThaspT mfnag RIR1_ASFB7 : 325- 334: dqihn RgdgTwylfS pdqap RIR1_ASFB7 : 689- 697: aeird Ryk-TsremN qkilt RIR1_ASFM2 : 171- 180: ydlls RhviThaspT mfnag RIR1_ASFM2 : 326- 335: dqihn RgdgTwylfS pdqap RIR1_ASFM2 : 690- 698: aeire Ryk-TsremN qkilt RIR1_BPT4 : 48- 57: iksyl RdgmTtddiQ tivik RIR1_BPT4 : 213- 221: imagc Rtp-TrqfsS cvvie RIR1_CAEEL : 202- 210: nlmse Rym-ThaspT lfnsg RIR1_CAEEL : 321- 329: efvsl Rkn-TgpeeE rardl RIR1_CAEEL : 536- 545: rdlnk RifeTiyyaA leasc RIR1_CAEEL : 654- 663: kdlve RglwTdemkN rlian RIR1_EBV : 99- 108: ylsal RyydTylyvG rsgkq RIR1_EBV : 439- 448: llalp RlsvTlpgeG avgdg RIR1_EBV : 664- 672: rqryl Rfq-TafdyN qedli RIR1_ECOLI : 139- 147: fidhd Rdm-TfsyaA vkqle RIR1_ECOLI : 216- 224: imsgv Rtp-TrqfsS cvlie RIR1_ECOLI : 377- 385: qeefe Rly-TkyekD dsirk RIR1_HAEIN : 10- 18: lmvtk Rdg-TqeqiN ldkih RIR1_HAEIN : 24- 32: ldkih Rvi-TwaaeG ldnvs RIR1_HAEIN : 139- 147: fidhw Rdm-TfsyaA vkqle RIR1_HAEIN : 216- 224: imagv Rtp-TrqfsS cvlie RIR1_HAEIN : 389- 397: qdpti Rkr-TvkavE ifsll RIR1_HCMVA : 28- 37: grips RsaeTeteeS saeva RIR1_HCMVA : 200- 209: rnalw RemdTvsrhS aglgs RIR1_HCMVA : 250- 259: kanwa ResrTplcyA selcd RIR1_HSV11 : 129- 138: ggtpr RsagTstgtQ tadvp RIR1_HSV11 : 403- 412: mpyyl ReyvTrlvnG fkplv RIR1_HSV11 : 597- 605: nkatl Rai-TsnvsA ilarn RIR1_HSV11 : 995- 1004: fskvt RdgeTlrpnT lllke RIR1_HSV11 : 1001- 1009: dgetl Rpn-TlllkE lertf RIR1_HSV11 : 1047- 1056: pthpl RrfkTafdyD qklli RIR1_HSV11 : 1048- 1056: thplr Rfk-TafdyD qklli RIR1_HSV23 : 19- 28: pahpl RrfkTafdyD qelli RIR1_HSV23 : 20- 28: ahplr Rfk-TafdyD qelli RIR1_HSVEB : 79- 87: elvhl Rir-TrnveD lkywl RIR1_HSVEB : 162- 171: gqffl RlatTathyT meepa RIR1_HSVEB : 261- 269: glslq Rfn-TppkeG csrgv RIR1_HSVEB : 321- 329: rgmla Rde-TvrcdN ifacm RIR1_HSVSA : 712- 721: imyyc RvkkTtkllQ leclk RIR1_HUMAN : 196- 204: nllse Rwf-ThaspT lfnag RIR1_HUMAN : 341- 349: dlfmk Rve-TnqdwS lmcpn RIR1_MOUSE : 341- 349: dlfmk Rve-TnqdwS lmcpn RIR1_SALTY : 139- 147: fivhd Rdm-TfsyaA vkqle RIR1_SALTY : 216- 224: imsgv Rtp-TrqfsS cvlie RIR1_SCHPO : 139- 147: aiiyd Rdf-TynffG fktle RIR1_SCHPO : 196- 204: nlmsq Ryf-ThaspT lfnag RIR1_VACCC : 369- 377: gdefe Rly-TlyerE rryks RIR1_VACCV : 369- 377: gdefe Rly-TlyerE rryks RIR1_VARV : 369- 377: gdefe Rly-TlyerE kryks RIR1_VZVD : 185- 194: wtdvc RvffTalacQ kivpa RIR1_VZVD : 231- 239: vgrav Rai-TgdvgT vlqsr RIR1_YEAST : 717- 725: lnlfl Rap-TmgklT smhfy RIR3_ECOLI : 12- 21: gapft RrgiTlptrE mw RIR3_ECOLI : 13- 21: apftr Rgi-TlptrE mw RIR3_SALTY : 61- 69: asqhe Rlg-TlvreG yydda RIR3_SALTY : 267- 276: hpdil RfldTkrenA dekir RIR3_SALTY : 515- 523: rlare Rgk-TfagfA qsrya RIR3_SALTY : 554- 563: ralfa RsgiTlptrE mwlkl RIR3_YEAST : 196- 204: nlmsl Ryf-ThaspT lfnag H 8: 8.3401 127( 24) L-x-T Occurences: 127(24) RIR1_ASFB7 : 162- 164: nikmi LlT ydlls RIR1_ASFB7 : 634- 636: pftsn LyT rrtls RIR1_ASFB7 : 660- 662: lkeid LwT eaiqq RIR1_ASFB7 : 742- 744: gwkkg LtT gsyyc RIR1_ASFM2 : 163- 165: nmkmi LlT ydlls RIR1_ASFM2 : 635- 637: pftsn LyT rrtls RIR1_ASFM2 : 743- 745: gwkkg LtT gsyyc RIR1_BPT4 : 204- 206: trqis LpT pimag RIR1_BPT4 : 400- 402: elfel LmT ersgt RIR1_BPT4 : 456- 458: daeig LcT lsafv RIR1_CAEEL : 226- 228: msscf LlT mseds RIR1_CAEEL : 426- 428: snqqn LgT ikcsn RIR1_CAEEL : 434- 436: ikcsn LcT eiiey RIR1_CAEEL : 656- 658: lverg LwT demkn RIR1_CAEEL : 738- 740: gwkkg LkT gmyyl RIR1_CAEEL : 745- 747: tgmyy LrT kpavn RIR1_CAEEL : 763- 765: vdkna LkT nqqae RIR1_EBV : 73- 75: mhrde LeT rvsaf RIR1_EBV : 189- 191: lasci LtT pdlss RIR1_EBV : 271- 273: qifkf LeT klpen RIR1_EBV : 333- 335: reyyr LvT agkfc RIR1_EBV : 528- 530: myfta LcT sslig RIR1_EBV : 536- 538: sslig LhT rkifp RIR1_EBV : 720- 722: syelg LkT imyyc RIR1_EBV : 812- 814: seddl LeT dgfte RIR1_ECOLI : 6- 8: mnqnl LvT krdgs RIR1_ECOLI : 207- 209: tfkis LpT pimsg RIR1_ECOLI : 378- 380: eefer LyT kyekd RIR1_ECOLI : 444- 446: cleia LpT kplnd RIR1_ECOLI : 461- 463: ngeia LcT lsafn RIR1_ECOLI : 587- 589: tykkd LdT ianep RIR1_ECOLI : 718- 720: qllkd LlT aykfg RIR1_HAEIN : 207- 209: tfkis LpT pimag RIR1_HAEIN : 444- 446: cleia LpT kplqh RIR1_HAEIN : 461- 463: ngeia LcT lsafn RIR1_HAEIN : 718- 720: vllkd LlT aykyg RIR1_HAEIN : 726- 728: aykyg LkT lyyqn RIR1_HCMVA : 126- 128: rvssg LsT fnpag RIR1_HCMVA : 369- 371: dgqls LsT ftmst RIR1_HCMVA : 637- 639: svlre LvT eavvw RIR1_HCMVA : 677- 679: igvag LhT almrl RIR1_HSV11 : 306- 308: dprpr LgT gtayp RIR1_HSV11 : 572- 574: pamln LgT rnyyt RIR1_HSV11 : 792- 794: iagsn LcT eivhp RIR1_HSV11 : 871- 873: igmqg LhT aclkl RIR1_HSV11 : 985- 987: egfap LfT nlfsk RIR1_HSV11 : 1106- 1108: aykrg LkT gmyyc RIR1_HSV23 : 78- 80: aykrg LkT gmyyc RIR1_HSVEB : 34- 36: gyane LsT tlppr RIR1_HSVEB : 163- 165: qfflr LaT tathy RIR1_HSVEB : 437- 439: imgsn LcT eiiqh RIR1_HSVEB : 524- 526: lgiqg LhT aflml RIR1_HSVEB : 602- 604: nawrr LrT eikqh RIR1_HSVEB : 677- 679: arlqa LsT lemaq RIR1_HSVEB : 760- 762: aykrg LkT gmyyc RIR1_HSVSA : 199- 201: iiapt LdT eksti RIR1_HSVSA : 625- 627: vkpqd LcT vrfyg RIR1_HSVSA : 704- 706: gfrlg LkT imyyc RIR1_HUMAN : 56- 58: vttve LdT laaet RIR1_HUMAN : 67- 69: etaat LtT khpdy RIR1_HUMAN : 420- 422: snqqn LgT ikcsn RIR1_HUMAN : 428- 430: ikcsn LcT eivey RIR1_HUMAN : 732- 734: gwkqg LkT gmyyl RIR1_HUMAN : 739- 741: tgmyy LrT rpaan RIR1_MOUSE : 56- 58: vttve LdT laaet RIR1_MOUSE : 67- 69: etaat LtT khpdy RIR1_MOUSE : 420- 422: snqqn LgT ikcsn RIR1_MOUSE : 428- 430: ikcsn LcT eivey RIR1_MOUSE : 732- 734: gwkqg LkT gmyyl RIR1_MOUSE : 739- 741: tgmyy LrT rpaan RIR1_SALTY : 6- 8: mnqsl LvT krdgr RIR1_SALTY : 207- 209: tfkis LpT pimsg RIR1_SALTY : 444- 446: cleia LpT kplnd RIR1_SALTY : 461- 463: ngeia LcT lsafn RIR1_SALTY : 718- 720: qllkd LlT aykfg RIR1_SCHPO : 220- 222: lsscf LvT mkdds RIR1_SCHPO : 428- 430: irssn LcT eivey RIR1_SCHPO : 451- 453: lasva LpT fikdg RIR1_SCHPO : 731- 733: gwkkg LkT gmyyl RIR1_SCHPO : 738- 740: tgmyy LrT maasa RIR1_VACCC : 29- 31: klcyg LnT dhidp RIR1_VACCC : 56- 58: vttve LdT laaei RIR1_VACCC : 370- 372: defer LyT lyere RIR1_VACCC : 420- 422: snqqn LgT ikcsn RIR1_VACCC : 428- 430: ikcsn LcT eiiqy RIR1_VACCC : 730- 732: gwslg LkT gmyyl RIR1_VACCC : 737- 739: tgmyy LrT kpasa RIR1_VACCV : 29- 31: klcyg LnT dhidp RIR1_VACCV : 56- 58: vttve LdT laaei RIR1_VACCV : 370- 372: defer LyT lyere RIR1_VACCV : 420- 422: snqqn LgT ikcsn RIR1_VACCV : 428- 430: ikcsn LcT eiiqy RIR1_VACCV : 730- 732: gwslg LkT gmyyl RIR1_VACCV : 737- 739: tgmyy LrT kpasa RIR1_VARV : 29- 31: klcyg LnT dhidp RIR1_VARV : 56- 58: vttve LdT ltaei RIR1_VARV : 370- 372: defer LyT lyere RIR1_VARV : 420- 422: snqqn LgT ikcsn RIR1_VARV : 428- 430: ikcsn LcT eiiqy RIR1_VARV : 730- 732: gwslg LkT gmyyl RIR1_VARV : 737- 739: tgmyy LrT kpasa RIR1_VZVD : 119- 121: dqypa LaT lglqs RIR1_VZVD : 301- 303: pwhvd LqT vlatr RIR1_VZVD : 305- 307: dlqtv LaT rgmlv RIR1_VZVD : 326- 328: nifcc LwT pdlff RIR1_VZVD : 358- 360: nradi LrT lhgea RIR1_VZVD : 428- 430: itgsn LcT eivqk RIR1_VZVD : 451- 453: lasin LtT clskg RIR1_VZVD : 509- 511: igiqg LhT tclrl RIR1_VZVD : 745- 747: aykag LkT gmyyc RIR1_YEAST : 187- 189: dieaa LeT ynlms RIR1_YEAST : 370- 372: defea LyT ryeke RIR1_YEAST : 663- 665: gmkqy LiT qngsi RIR1_YEAST : 736- 738: gwkkg LkT gmyyl RIR1_YEAST : 743- 745: tgmyy LrT qaasa RIR3_ECOLI : 17- 19: rrgit LpT remw RIR3_SALTY : 62- 64: sqher LgT lvreg RIR3_SALTY : 113- 115: ytsyt LkT fdgkr RIR3_SALTY : 143- 145: qgdet LaT qltde RIR3_SALTY : 269- 271: dilrf LdT krena RIR3_SALTY : 559- 561: rsgit LpT remwl RIR3_YEAST : 187- 189: diesv LkT ynlms RIR3_YEAST : 370- 372: defee LyT ryere RIR3_YEAST : 419- 421: tnqqn LgT ikssn RIR3_YEAST : 663- 665: smkqy LiT qngsi RIR3_YEAST : 736- 738: gwkkg LkT gmyyl RIR3_YEAST : 743- 745: tgmyy LrT qaasa I 9: 8.3401 127( 24) T-L Occurences: 127(24) RIR1_ASFB7 : 8- 9: tffie TL asdvy RIR1_ASFB7 : 33- 34: aqvky TL qelis RIR1_ASFB7 : 53- 54: hydys TL aarls RIR1_ASFB7 : 639- 640: lytrr TL sgefi RIR1_ASFM2 : 54- 55: hydys TL aarls RIR1_ASFM2 : 640- 641: lytrr TL sgefi RIR1_BPT4 : 351- 352: kndyi TL fsphe RIR1_BPT4 : 458- 459: eiglc TL safvl RIR1_BPT4 : 609- 610: girns TL salmp RIR1_CAEEL : 106- 107: sevmk TL hefhh RIR1_CAEEL : 156- 157: yfgfk TL ersyl RIR1_CAEEL : 210- 211: thasp TL fnsgt RIR1_CAEEL : 240- 241: lgiyd TL kqcal RIR1_CAEEL : 589- 590: qcdwa TL rkkia RIR1_EBV : 183- 184: gvens TL ascil RIR1_EBV : 443- 444: prlsv TL pgega RIR1_EBV : 707- 708: aaras TL anllv RIR1_ECOLI : 303- 304: rggaa TL fypmw RIR1_ECOLI : 354- 355: kgedi TL fspsd RIR1_ECOLI : 463- 464: eialc TL safnl RIR1_ECOLI : 512- 513: amgrr TL gigvi RIR1_ECOLI : 615- 616: glrns TL salmp RIR1_ECOLI : 728- 729: kfgvk TL yyqnt RIR1_HAEIN : 303- 304: rggaa TL yypiw RIR1_HAEIN : 354- 355: kgsei TL fspsd RIR1_HAEIN : 463- 464: eialc TL safnl RIR1_HAEIN : 615- 616: glrns TL talmp RIR1_HAEIN : 728- 729: kyglk TL yyqnt RIR1_HCMVA : 409- 410: ckwms TL scgvs RIR1_HSV11 : 157- 158: ppprf TL gggcc RIR1_HSV11 : 208- 209: dtdse TL shass RIR1_HSV11 : 488- 489: hstph TL vergl RIR1_HSV11 : 595- 596: ttnka TL raits RIR1_HSV11 : 713- 714: knvtw TL fdrdt RIR1_HSV11 : 847- 848: imids TL qptpq RIR1_HSV11 : 999- 1000: trdge TL rpntl RIR1_HSV11 : 1004- 1005: tlrpn TL llkel RIR1_HSV11 : 1078- 1079: hsqsm TL yvtek RIR1_HSV11 : 1088- 1089: ekadg TL pastl RIR1_HSV11 : 1093- 1094: tlpas TL vrllv RIR1_HSV23 : 50- 51: hsqsm TL yvtek RIR1_HSV23 : 60- 61: ekadg TL pastl RIR1_HSV23 : 65- 66: tlpas TL vrllv RIR1_HSVEB : 37- 38: nelst TL pprps RIR1_HSVEB : 57- 58: trvvd TL kprcr RIR1_HSVEB : 117- 118: dfiqr TL hafes RIR1_HSVEB : 357- 358: sgvmw TL fddta RIR1_HSVEB : 561- 562: mkasa TL crlgm RIR1_HSVEB : 592- 593: sypgv TL anrna RIR1_HSVEB : 679- 680: lqals TL emaqw RIR1_HSVEB : 713- 714: eydqr TL idmca RIR1_HSVSA : 140- 141: eplkd TL vyvqk RIR1_HSVSA : 198- 199: fiiap TL dteks RIR1_HSVSA : 349- 350: ykqsv TL kslmf RIR1_HSVSA : 678- 679: qsqsl TL fltee RIR1_HUMAN : 58- 59: tveld TL aaeta RIR1_HUMAN : 66- 67: aetaa TL ttkhp RIR1_HUMAN : 120- 121: mvaks TL divla RIR1_HUMAN : 150- 151: yfgfk TL ersyl RIR1_HUMAN : 204- 205: thasp TL fnagt RIR1_HUMAN : 234- 235: egiyd TL kqcal RIR1_HUMAN : 751- 752: npiqf TL nkekl RIR1_MOUSE : 58- 59: tveld TL aaeta RIR1_MOUSE : 66- 67: aetaa TL ttkhp RIR1_MOUSE : 120- 121: mvass TL divma RIR1_MOUSE : 150- 151: yfgfk TL ersyl RIR1_MOUSE : 204- 205: thapp TL fnagt RIR1_MOUSE : 234- 235: egiyd TL kqcal RIR1_MOUSE : 751- 752: npiqf TL nkekl RIR1_SALTY : 303- 304: rggaa TL fypmw RIR1_SALTY : 354- 355: kggdi TL fspsd RIR1_SALTY : 463- 464: eialc TL safnl RIR1_SALTY : 474- 475: lgaik TL delee RIR1_SALTY : 512- 513: amgrr TL gigvi RIR1_SALTY : 615- 616: glrns TL salmp RIR1_SALTY : 728- 729: kfgvk TL yyqnt RIR1_SCHPO : 150- 151: ffgfk TL ersyl RIR1_SCHPO : 204- 205: thasp TL fnagt RIR1_SCHPO : 234- 235: egiyd TL kmcam RIR1_VACCC : 58- 59: tveld TL aaeia RIR1_VACCC : 150- 151: yfgfk TL eksyl RIR1_VACCC : 204- 205: thasp TL fnagt RIR1_VACCC : 234- 235: egiyd TL krcal RIR1_VACCC : 372- 373: ferly TL yerer RIR1_VACCC : 749- 750: apiqf TL dkdki RIR1_VACCV : 58- 59: tveld TL aaeia RIR1_VACCV : 150- 151: yfgfk TL eksyl RIR1_VACCV : 204- 205: thasp TL fnagt RIR1_VACCV : 234- 235: egiyd TL krcal RIR1_VACCV : 372- 373: ferly TL yerer RIR1_VACCV : 749- 750: apiqf TL dkdki RIR1_VARV : 58- 59: tveld TL taeia RIR1_VARV : 150- 151: yfgfk TL eksyl RIR1_VARV : 204- 205: thasp TL fnagt RIR1_VARV : 234- 235: egiyd TL krcal RIR1_VARV : 372- 373: ferly TL yerek RIR1_VARV : 749- 750: apiqf TL dkdki RIR1_VZVD : 121- 122: ypala TL glqsa RIR1_VZVD : 169- 170: lpkia TL ipgin RIR1_VZVD : 349- 350: snvqw TL fdnra RIR1_VZVD : 360- 361: adilr TL hgeaf RIR1_VZVD : 586- 587: dlpwc TL rddic RIR1_VZVD : 717- 718: qsqsm TL fieer RIR1_YEAST : 76- 77: hpdya TL aaria RIR1_YEAST : 150- 151: yfgfk TL ersyl RIR1_YEAST : 204- 205: thasp TL fnagt RIR1_YEAST : 234- 235: egiyd TL kecal RIR1_YEAST : 349- 350: engtw TL fspts RIR1_YEAST : 587- 588: mwdwd TL rkdim RIR3_ECOLI : 16- 17: trrgi TL ptrem RIR3_SALTY : 64- 65: herlg TL vregy RIR3_SALTY : 112- 113: fytsy TL ktfdg RIR3_SALTY : 135- 136: tmval TL aqgde RIR3_SALTY : 142- 143: aqgde TL atqlt RIR3_SALTY : 284- 285: kirik TL slgvv RIR3_SALTY : 352- 353: rdffq TL aeiqf RIR3_SALTY : 558- 559: arsgi TL ptrem RIR3_SALTY : 663- 664: qglsl TL ffpdt RIR3_YEAST : 76- 77: hpdya TL aaria RIR3_YEAST : 130- 131: menkd TL nsaiv RIR3_YEAST : 150- 151: yfgfk TL ersyl RIR3_YEAST : 204- 205: thasp TL fnagt RIR3_YEAST : 234- 235: egiyd TL kecam RIR3_YEAST : 349- 350: edgpw TL fspsa RIR3_YEAST : 530- 531: seeaq TL nkqif RIR3_YEAST : 543- 544: tiyha TL easce RIR3_YEAST : 587- 588: mwdwe TL rkdiv J 10: 8.3401 146( 24) T-x(5)-L Occurences: 146(24) RIR1_ASFB7 : 3- 9: me TffietL asdvy RIR1_ASFB7 : 120- 126: llgie TmknsyL lknkd RIR1_ASFB7 : 414- 420: lshvg TitnsnL cievt RIR1_ASFM2 : 121- 127: llgie TmknsyL lknkd RIR1_ASFM2 : 415- 421: lshvg TitnsnL cieit RIR1_BPT4 : 458- 464: eiglc TlsafvL dnfdw RIR1_BPT4 : 514- 520: lgvgv TnyaawL asnfa RIR1_BPT4 : 676- 682: nkpyl TqvaimL kwvcq RIR1_CAEEL : 25- 31: hfdki TsriqkL sygln RIR1_CAEEL : 59- 65: ykgvt TveldnL aaeta RIR1_CAEEL : 156- 162: yfgfk TlersyL lkink RIR1_CAEEL : 205- 211: serym ThasptL fnsgt RIR1_CAEEL : 240- 246: lgiyd TlkqcaL isksa RIR1_CAEEL : 389- 395: grvrk TvkarkL wehiv RIR1_CAEEL : 428- 434: qqnlg TikcsnL cteii RIR1_CAEEL : 540- 546: krife TiyyaaL easce RIR1_CAEEL : 757- 763: navqf TvdknaL ktnqq RIR1_EBV : 131- 137: fcast TclyagL raalq RIR1_EBV : 183- 189: gvens TlasciL ttpdl RIR1_EBV : 428- 434: aqrad TqgdelL lalpr RIR1_EBV : 530- 536: ftalc TssligL htrki RIR1_EBV : 620- 626: astkv TnkeeaL rpnrs RIR1_ECOLI : 463- 469: eialc TlsafnL gainn RIR1_ECOLI : 572- 578: wfnet TyakgiL pidty RIR1_ECOLI : 589- 595: kkdld TianepL hydwe RIR1_HAEIN : 13- 19: tkrdg TqeqinL dkihr RIR1_HAEIN : 27- 33: ihrvi TwaaegL dnvsv RIR1_HAEIN : 463- 469: eialc TlsafnL gkien RIR1_HAEIN : 572- 578: yfnet TyakgiL pidty RIR1_HAEIN : 720- 726: lkdll TaykygL ktlyy RIR1_HCMVA : 101- 107: pspdg TpsvlsL trdsg RIR1_HCMVA : 285- 291: klaee TarfveL agcwg RIR1_HCMVA : 625- 631: vvlgn TrryfdL svlre RIR1_HCMVA : 814- 820: ecyfp TvvrrpL rvpvv RIR1_HSV11 : 310- 316: rlgtg TaypvpL eltpe RIR1_HSV11 : 368- 374: spprl TeddfgL lnyal RIR1_HSV11 : 488- 494: hstph TlvergL qsalk RIR1_HSV11 : 521- 527: vfqmy TriagfL acrat RIR1_HSV11 : 566- 572: qivps TpamlnL gtrny RIR1_HSV11 : 590- 596: vnpqa TtnkatL raits RIR1_HSV11 : 652- 658: esarp TgacvyL epwht RIR1_HSV11 : 663- 669: lepwh TdvravL rmkgv RIR1_HSV11 : 823- 829: cvsrq TfdfgrL rdavq RIR1_HSV11 : 855- 861: ptpqc TrgndnL rsmgi RIR1_HSV11 : 994- 1000: lfskv TrdgetL rpntl RIR1_HSV11 : 999- 1005: trdge TlrpntL llkel RIR1_HSV11 : 1004- 1010: tlrpn TlllkeL ertfs RIR1_HSV11 : 1013- 1019: keler TfsgkrL levmd RIR1_HSV11 : 1088- 1094: ekadg TlpastL vrllv RIR1_HSV23 : 60- 66: ekadg TlpastL vrllv RIR1_HSVEB : 52- 58: vleyi TrvvdtL kprcr RIR1_HSVEB : 82- 88: hlrir TrnvedL kywln RIR1_HSVEB : 647- 653: lfskv TatgevL rpnll RIR1_HSVSA : 579- 585: ialmp TagtsqL tgytd RIR1_HSVSA : 644- 650: pedvs TrykhfL tafdy RIR1_HSVSA : 716- 722: crvkk TtkllqL eclkl RIR1_HSVSA : 752- 758: pdshk TedacpL dqsec RIR1_HUMAN : 19- 25: mfdki TsriqkL cygln RIR1_HUMAN : 53- 59: ysgvt TveldtL aaeta RIR1_HUMAN : 150- 156: yfgfk TlersyL lking RIR1_HUMAN : 199- 205: serwf ThasptL fnagt RIR1_HUMAN : 234- 240: egiyd TlkqcaL isksa RIR1_HUMAN : 344- 350: mkrve TnqdwsL mcpne RIR1_HUMAN : 400- 406: esqte TgtpymL ykdsc RIR1_HUMAN : 422- 428: qqnlg TikcsnL cteiv RIR1_HUMAN : 460- 466: vtseh TydfkkL aevtk RIR1_HUMAN : 534- 540: kqife TiyygaL eascd RIR1_HUMAN : 751- 757: npiqf TlnkekL kdkek RIR1_MOUSE : 19- 25: mfdki TsriqkL cygln RIR1_MOUSE : 53- 59: ysgvt TveldtL aaeta RIR1_MOUSE : 150- 156: yfgfk TlersyL lking RIR1_MOUSE : 199- 205: sekwf ThapptL fnagt RIR1_MOUSE : 234- 240: egiyd TlkqcaL isksa RIR1_MOUSE : 344- 350: mkrve TnqdwsL mcpne RIR1_MOUSE : 400- 406: esqte TgtpymL ykdsc RIR1_MOUSE : 422- 428: qqnlg TikcsnL cteiv RIR1_MOUSE : 460- 466: vtpeh TydfekL aevtk RIR1_MOUSE : 534- 540: kqife TiyygaL easce RIR1_MOUSE : 751- 757: npiqf TlnkekL kdkek RIR1_SALTY : 463- 469: eialc TlsafnL gaikt RIR1_SALTY : 572- 578: wfnet TyakgiL pidty RIR1_SCHPO : 19- 25: afdki TarvsrL cygld RIR1_SCHPO : 53- 59: ypgvt TieldnL aaeta RIR1_SCHPO : 150- 156: ffgfk TlersyL lridg RIR1_SCHPO : 199- 205: sqryf ThasptL fnagt RIR1_SCHPO : 400- 406: qsqve TgnpfmL ykdsc RIR1_SCHPO : 422- 428: qknvg TirssnL cteiv RIR1_SCHPO : 533- 539: iqife TiyhaaL easce RIR1_SCHPO : 750- 756: aaikf TvdpvaL rarne RIR1_VACCC : 19- 25: mfdki TsrirkL cygln RIR1_VACCC : 53- 59: yngvt TveldtL aaeia RIR1_VACCC : 150- 156: yfgfk TleksyL lkinn RIR1_VACCC : 199- 205: sekwf ThasptL fnagt RIR1_VACCC : 234- 240: egiyd TlkrcaL iskma RIR1_VACCC : 400- 406: esqie TgtpfiL ykdac RIR1_VACCC : 422- 428: qqnlg TikcsnL cteii RIR1_VACCC : 533- 539: kkife TiyygaL easce RIR1_VACCV : 19- 25: mfdki TsrirkL cygln RIR1_VACCV : 53- 59: yngvt TveldtL aaeia RIR1_VACCV : 150- 156: yfgfk TleksyL lkinn RIR1_VACCV : 199- 205: sekwf ThasptL fnagt RIR1_VACCV : 234- 240: egiyd TlkrcaL iskma RIR1_VACCV : 400- 406: esqie TgtpfiL ykdac RIR1_VACCV : 422- 428: qqnlg TikcsnL cteii RIR1_VACCV : 533- 539: kkife TiyygaL easce RIR1_VARV : 19- 25: mfdki TsrirkL cygln RIR1_VARV : 53- 59: yngvt TveldtL taeia RIR1_VARV : 150- 156: yfgfk TleksyL lkinn RIR1_VARV : 199- 205: sekwf ThasptL fnagt RIR1_VARV : 234- 240: egiyd TlkrcaL iskma RIR1_VARV : 400- 406: esqie TgtpfiL ykdac RIR1_VARV : 422- 428: qqnlg TikcsnL cteii RIR1_VARV : 533- 539: kkife TiyygaL easce RIR1_VZVD : 82- 88: metwl TspilcL tprvr RIR1_VZVD : 158- 164: laatv TteivnL pkiat RIR1_VZVD : 200- 206: kivpa TpvmmfL gretg RIR1_VZVD : 367- 373: hgeaf TstylrL eregl RIR1_VZVD : 576- 582: qdgfs TisyldL pwctl RIR1_VZVD : 632- 638: mfskv TtsgelL rpnld RIR1_VZVD : 769- 775: aggel TctscaL RIR1_YEAST : 19- 25: qfdki TarisrL cygld RIR1_YEAST : 53- 59: yegvt TieldnL aaetc RIR1_YEAST : 150- 156: yfgfk TlersyL lring RIR1_YEAST : 189- 195: eaale TynlmsL kyfth RIR1_YEAST : 199- 205: slkyf ThasptL fnagt RIR1_YEAST : 234- 240: egiyd TlkecaL iskta RIR1_YEAST : 244- 250: alisk TaggigL hihni RIR1_YEAST : 382- 388: egrgk TikaqkL wysil RIR1_YEAST : 464- 470: dgkts TynfkkL heiak RIR1_YEAST : 515- 521: qglad TfmllrL pfdse RIR1_YEAST : 826- 832: gshsl TkgmaeL nvqes RIR3_ECOLI : 11- 17: vgapf TrrgitL ptrem RIR3_SALTY : 12- 18: rvmqe TmdyhaL namln RIR3_SALTY : 130- 136: fedrv TmvaltL aqgde RIR3_SALTY : 545- 551: dwqpk TakvraL farsg RIR3_YEAST : 19- 25: qfdki TsritrL sygld RIR3_YEAST : 23- 29: itsri TrlsygL dpnri RIR3_YEAST : 53- 59: ysgvt TveldnL aaetc RIR3_YEAST : 150- 156: yfgfk TlersyL lrlng RIR3_YEAST : 189- 195: esvlk TynlmsL ryfth RIR3_YEAST : 199- 205: slryf ThasptL fnagt RIR3_YEAST : 244- 250: amisk TaggvgL hinni RIR3_YEAST : 382- 388: egrgk TikaqkL wyail RIR3_YEAST : 421- 427: qqnlg TikssnL cceiv RIR3_YEAST : 515- 521: qglad TymmlrL pfese RIR3_YEAST : 538- 544: kqife TiyhatL easce K 11: 8.3401 63( 24) A-P Occurences: 63(24) RIR1_ASFB7 : 301- 302: eqrln AP nlkyg RIR1_ASFB7 : 338- 339: fspdq AP nlhkv RIR1_ASFM2 : 302- 303: eqrln AP nlkyg RIR1_ASFM2 : 339- 340: fspdq AP nlhkv RIR1_BPT4 : 429- 430: firek AP irqsn RIR1_BPT4 : 586- 587: idqia AP kyvcd RIR1_CAEEL : 119- 120: htgkh AP misde RIR1_CAEEL : 443- 444: iieys AP deiav RIR1_CAEEL : 606- 607: nsllm AP mptas RIR1_EBV : 417- 418: rclvn AP lavra RIR1_EBV : 684- 685: msrdr AP fvdqs RIR1_ECOLI : 74- 75: lisrd AP dyqyl RIR1_ECOLI : 431- 432: fdpai AP vrqsn RIR1_HAEIN : 431- 432: fdpqv AP vrqsn RIR1_HCMVA : 847- 848: clfqa AP aiqnd RIR1_HSV11 : 15- 16: pvear AP vggqe RIR1_HSV11 : 36- 37: geaag AP lahgh RIR1_HSV11 : 102- 103: aaasp AP fvavt RIR1_HSV11 : 251- 252: wsndt AP ldvcp RIR1_HSV11 : 276- 277: avdph AP tpeag RIR1_HSV11 : 983- 984: vsegf AP lftnl RIR1_HSV11 : 1068- 1069: lcadr AP yvdhs RIR1_HSV23 : 40- 41: lcadr AP yvdhs RIR1_HSVEB : 722- 723: mcadr AP fvdqs RIR1_HSVSA : 196- 197: scfii AP tldte RIR1_HSVSA : 214- 215: ifgel AP llasr RIR1_HSVSA : 320- 321: fdpqd AP nltrl RIR1_HSVSA : 668- 669: rasir AP yvdqs RIR1_HUMAN : 600- 601: nslli AP mptas RIR1_MOUSE : 201- 202: kwfth AP ptlfn RIR1_MOUSE : 574- 575: dmwnv AP tdlwd RIR1_MOUSE : 600- 601: nslli AP mptas RIR1_SALTY : 74- 75: lisrd AP dyqyl RIR1_SALTY : 431- 432: fdpvv AP vrqsn RIR1_SALTY : 746- 747: aqddl AP siqdd RIR1_SCHPO : 113- 114: ktdkp AP misdk RIR1_SCHPO : 356- 357: fcpne AP gladv RIR1_SCHPO : 599- 600: nsllv AP mptas RIR1_VACCC : 599- 600: nsllv AP mptas RIR1_VACCC : 744- 745: tkpas AP iqftl RIR1_VACCV : 599- 600: nsllv AP mptas RIR1_VACCV : 744- 745: tkpas AP iqftl RIR1_VARV : 599- 600: nsllv AP mptas RIR1_VARV : 744- 745: tkpas AP iqftl RIR1_VZVD : 554- 555: kiggl AP fkgft RIR1_VZVD : 707- 708: mcaer AP fidqs RIR1_YEAST : 113- 114: atgkp AP misdd RIR1_YEAST : 356- 357: fspts AP glsdc RIR1_YEAST : 436- 437: iveys AP detav RIR1_YEAST : 604- 605: nsltm AP mptas RIR1_YEAST : 718- 719: nlflr AP tmgkl RIR1_YEAST : 818- 819: reasp AP tgshs RIR1_YEAST : 846- 847: vpevp AP tknee RIR1_YEAST : 855- 856: neeka AP ivdde RIR3_ECOLI : 8- 9: tahvg AP ftrrg RIR3_SALTY : 218- 219: lreag AP ikrie RIR3_SALTY : 623- 624: rvyyp AP fmtne RIR3_YEAST : 113- 114: atgkh AP misde RIR3_YEAST : 356- 357: fspsa AP glddv RIR3_YEAST : 604- 605: nsltm AP mptas RIR3_YEAST : 718- 719: nlflq AP smgki RIR3_YEAST : 829- 830: ledsv AP avpte RIR3_YEAST : 858- 859: viact AP tpeac L 12: 8.3401 100( 24) A-x(2)-T Occurences: 100(24) RIR1_ASFB7 : 176- 179: hvith AspT mfnag RIR1_ASFB7 : 580- 583: weerv AqtT qgvlt RIR1_ASFM2 : 11- 14: ivkkl AsaT ygkal RIR1_ASFM2 : 177- 180: hvith AspT mfnag RIR1_ASFM2 : 581- 584: wenrv AqtT qgvlt RIR1_BPT4 : 29- 32: vlswa AegT svdpy RIR1_BPT4 : 170- 173: etpqf AfmT igmal RIR1_BPT4 : 196- 199: irfye AvsT rqisl RIR1_BPT4 : 441- 444: lccei AipT ndvns RIR1_CAEEL : 66- 69: eldnl AaeT aasmt RIR1_CAEEL : 71- 74: aaeta AsmT tqhpe RIR1_CAEEL : 192- 195: ddits AieT ynlms RIR1_CAEEL : 207- 210: rymth AspT lfnsg RIR1_CAEEL : 473- 476: dfvkl AevT kvitr RIR1_CAEEL : 724- 727: akpsy AgiT smhfy RIR1_CAEEL : 762- 765: tvdkn AlkT nqqae RIR1_EBV : 128- 131: lagfc AstT clyag RIR1_EBV : 527- 530: hmyft AlcT sslig RIR1_EBV : 599- 602: ptsgc AqvT gcsda RIR1_ECOLI : 199- 202: krfyd AvsT fkisl RIR1_ECOLI : 273- 276: irgge AfhT gcipf RIR1_ECOLI : 443- 446: lclei AlpT kplnd RIR1_ECOLI : 460- 463: engei AlcT lsafn RIR1_HAEIN : 199- 202: krfyd AtsT fkisl RIR1_HAEIN : 273- 276: irgge AfhT gcipf RIR1_HAEIN : 443- 446: lclei AlpT kplqh RIR1_HAEIN : 460- 463: engei AlcT lsafn RIR1_HCMVA : 42- 45: ssaev AadT iggdd RIR1_HCMVA : 67- 70: dkeas AgnT nvssg RIR1_HCMVA : 80- 83: gvacv AgfT sgggv RIR1_HCMVA : 132- 135: stfnp AgaT rmeld RIR1_HCMVA : 282- 285: dlpkl AeeT arfve RIR1_HSV11 : 649- 652: hnkes ArpT gacvy RIR1_HSV11 : 760- 763: givrs AatT gspfv RIR1_HSV11 : 902- 905: vmlls AmkT snalc RIR1_HSV11 : 1085- 1088: yvtek AdgT lpast RIR1_HSV23 : 57- 60: yvtek AdgT lpast RIR1_HSVEB : 194- 197: tyifk AyfT alagq RIR1_HSVEB : 404- 407: iivrs AvmT gspfl RIR1_HSVEB : 445- 448: eiiqh AdeT qngvc RIR1_HSVEB : 485- 488: aalgr AaaT atifv RIR1_HSVEB : 487- 490: lgraa AtaT ifvns RIR1_HSVEB : 558- 561: lnsmk AsaT lcrlg RIR1_HSVEB : 676- 679: carlq AlsT lemaq RIR1_HSVSA : 510- 513: tmyyt AvkT sseic RIR1_HUMAN : 37- 40: dfvdp AqiT mkviq RIR1_HUMAN : 60- 63: eldtl AaeT aatlt RIR1_HUMAN : 65- 68: aaeta AtlT tkhpd RIR1_HUMAN : 117- 120: hspmv AksT ldivl RIR1_HUMAN : 186- 189: edida AieT ynlls RIR1_HUMAN : 201- 204: rwfth AspT lfnag RIR1_HUMAN : 467- 470: dfkkl AevT kvvvr RIR1_MOUSE : 37- 40: dfvdp AqiT mkviq RIR1_MOUSE : 60- 63: eldtl AaeT aatlt RIR1_MOUSE : 65- 68: aaeta AtlT tkhpd RIR1_MOUSE : 117- 120: hspmv AssT ldivm RIR1_MOUSE : 186- 189: edida AieT ynlls RIR1_MOUSE : 201- 204: kwfth AppT lfnag RIR1_MOUSE : 467- 470: dfekl AevT kvivr RIR1_SALTY : 199- 202: krfyd AvsT fkisl RIR1_SALTY : 273- 276: irgge AfhT gcipf RIR1_SALTY : 443- 446: lclei AlpT kplnd RIR1_SALTY : 460- 463: engei AlcT lsafn RIR1_SALTY : 471- 474: afnlg AikT ldele RIR1_SCHPO : 60- 63: eldnl AaeT aatmt RIR1_SCHPO : 65- 68: aaeta AtmT tkhpd RIR1_SCHPO : 186- 189: ediea AieT ynlms RIR1_SCHPO : 201- 204: ryfth AspT lfnag RIR1_SCHPO : 450- 453: nlasv AlpT fikdg RIR1_SCHPO : 781- 784: kaeis AepT keeid RIR1_VACCC : 65- 68: aaeia AtcT tqhpd RIR1_VACCC : 186- 189: wdids AieT ynlls RIR1_VACCC : 201- 204: kwfth AspT lfnag RIR1_VACCV : 65- 68: aaeia AtcT tqhpd RIR1_VACCV : 186- 189: wdids AieT ynlls RIR1_VACCV : 201- 204: kwfth AspT lfnag RIR1_VARV : 65- 68: taeia AtcT tqhpd RIR1_VARV : 186- 189: wdids AieT ynlls RIR1_VARV : 201- 204: kwfth AspT lfnag RIR1_VZVD : 118- 121: kdqyp AlaT lglqs RIR1_VZVD : 155- 158: flrla AtvT teivn RIR1_VZVD : 396- 399: tiirs AavT gspfl RIR1_VZVD : 471- 474: dlqlt ArtT vifln RIR1_VZVD : 611- 614: ptvss AqvT ecseg RIR1_YEAST : 60- 63: eldnl AaeT caymt RIR1_YEAST : 65- 68: aaetc AymT tvhpd RIR1_YEAST : 186- 189: rdiea AleT ynlms RIR1_YEAST : 201- 204: kyfth AspT lfnag RIR1_YEAST : 369- 372: gdefe AlyT ryeke RIR1_YEAST : 794- 797: sdfvp AavT anati RIR1_YEAST : 798- 801: paavt AnaT ipsld RIR3_ECOLI : 8- 11: tahvg ApfT rrgit RIR3_SALTY : 1- 4: AttT pervm RIR3_SALTY : 159- 162: grfqp AtpT flncg RIR3_SALTY : 504- 507: titwh AvhT smrla RIR3_SALTY : 650- 653: iidty AeaT rhvdq RIR3_YEAST : 60- 63: eldnl AaeT caymt RIR3_YEAST : 65- 68: aaetc AymT tvhpd RIR3_YEAST : 201- 204: ryfth AspT lfnag RIR3_YEAST : 831- 834: dsvap AvpT etike M 13: 8.3401 79( 24) A-x(4)-R Occurences: 79(24) RIR1_ASFB7 : 80- 85: vrlqa AqscsR lspqf RIR1_ASFB7 : 599- 604: qlrla AmqgvR ngylt RIR1_ASFB7 : 684- 689: ildip AeirdR yktsr RIR1_ASFM2 : 81- 86: vslqa AqscsR lsshf RIR1_ASFM2 : 600- 605: qlrla AiqgvR ngylt RIR1_ASFM2 : 685- 690: ildip AeireR yktsr RIR1_BPT4 : 479- 484: kinel AevqvR aldnl RIR1_CAEEL : 81- 86: qhpey AllaaR iavsn RIR1_CAEEL : 140- 145: dklns AivydR dysyt RIR1_CAEEL : 382- 387: yakye AegrvR ktvka RIR1_CAEEL : 595- 600: lrkki AkhgiR nsllm RIR1_EBV : 140- 145: aglra AlqraR peies RIR1_EBV : 315- 320: fdpkd AgdleR lygee RIR1_EBV : 417- 422: rclvn AplavR aqrad RIR1_EBV : 420- 425: vnapl AvraqR adtqg RIR1_EBV : 625- 630: tnkee AlrpnR sfwrh RIR1_EBV : 709- 714: rastl AnllvR syelg RIR1_EBV : 745- 750: ckasa AlsvpR eeqne RIR1_ECOLI : 67- 72: iikaa AdlisR dapdy RIR1_ECOLI : 85- 90: laarl AifhlR kkayg RIR1_ECOLI : 429- 434: spfdp AiapvR qsnlc RIR1_ECOLI : 482- 487: eleel AilavR aldal RIR1_ECOLI : 525- 530: fayyl AndgkR ysdgs RIR1_HAEIN : 85- 90: laarl AifhlR kkayg RIR1_HAEIN : 482- 487: eleel AdlavR sldal RIR1_HAEIN : 525- 530: yayyl AkngvR ysdgs RIR1_HCMVA : 6- 11: mnpad AdeeqR vssvp RIR1_HCMVA : 282- 287: dlpkl AeetaR fvela RIR1_HCMVA : 332- 337: valta AiensR hsriy RIR1_HCMVA : 391- 396: dflis AdpfsR daswa RIR1_HCMVA : 663- 668: wwves AleklR plhig RIR1_HSV11 : 323- 328: ltpen AeavaR flgda RIR1_HSV11 : 528- 533: iagfl AcratR gmrhi RIR1_HSV11 : 531- 536: flacr AtrgmR hialg RIR1_HSV11 : 753- 758: piqel AygivR saatt RIR1_HSV11 : 816- 821: gsvnl ArcvsR qtfdf RIR1_HSV11 : 1091- 1096: dgtlp AstlvR llvha RIR1_HSV23 : 15- 20: pcldp AhplrR fktaf RIR1_HSV23 : 63- 68: dgtlp AstlvR llvha RIR1_HSVEB : 311- 316: hadir AilnmR gmlar RIR1_HSVEB : 397- 402: piqdm AfiivR savmt RIR1_HSVEB : 536- 541: ldldm AspeaR qlnkq RIR1_HSVEB : 598- 603: lanrn AwrrlR teikq RIR1_HSVSA : 175- 180: qlvcc AtpvmR sagva RIR1_HSVSA : 320- 325: fdpqd ApnltR lygle RIR1_HSVSA : 463- 468: sptss AtvgqR ersmg RIR1_HUMAN : 75- 80: khpdy AilaaR iavsn RIR1_HUMAN : 134- 139: drlns AiiydR dfsyn RIR1_HUMAN : 251- 256: ggigv AvsciR atgsy RIR1_HUMAN : 511- 516: qglad AfilmR ypfes RIR1_HUMAN : 589- 594: lkeki AkygiR nslli RIR1_MOUSE : 75- 80: khpdy AilaaR iavsn RIR1_MOUSE : 134- 139: drlns AiiydR dfsyn RIR1_MOUSE : 251- 256: ggigv AvsciR atgsy RIR1_MOUSE : 511- 516: qglad AfilmR ypfes RIR1_MOUSE : 589- 594: lkeki AkygiR nslli RIR1_SALTY : 67- 72: iikaa AdlisR dapdy RIR1_SALTY : 85- 90: laarl AifhlR kkafg RIR1_SALTY : 482- 487: eleel AilavR aldal RIR1_SALTY : 525- 530: faywl AkngkR ysdgs RIR1_SCHPO : 75- 80: khpdy AilaaR iavsn RIR1_SCHPO : 134- 139: delds AiiydR dftyn RIR1_SCHPO : 510- 515: qglad AffalR lpfes RIR1_SCHPO : 588- 593: fkeki AkhgiR nsllv RIR1_VACCC : 75- 80: qhpdy AilaaR iavsn RIR1_VACCV : 75- 80: qhpdy AilaaR iavsn RIR1_VARV : 75- 80: qhpdy AilaaR iavsn RIR1_VZVD : 95- 100: prvrq AiegrR deirr RIR1_VZVD : 389- 394: piqdi AftiiR saavt RIR1_YEAST : 75- 80: vhpdy AtlaaR iaisn RIR1_YEAST : 134- 139: dklns AivydR dfqys RIR1_YEAST : 474- 479: klhei AkvvtR nlnrv RIR3_ECOLI : 8- 13: tahvg ApftrR gitlp RIR3_SALTY : 56- 61: hsvtf AsqheR lgtlv RIR3_SALTY : 276- 281: tkren AdekiR iktls RIR3_SALTY : 335- 340: ydeli AdphvR ktyin RIR3_SALTY : 606- 611: ihpiv AkieiR kegkt RIR3_YEAST : 75- 80: vhpdy AtlaaR iaisn RIR3_YEAST : 134- 139: dtlns AivydR dfqyt N 14: 8.3401 79( 24) A-x(4)-P Occurences: 79(24) RIR1_ASFB7 : 183- 188: ptmfn AgtkkP qlssc RIR1_ASFB7 : 705- 710: iltkh AaarnP fvsqs RIR1_ASFM2 : 184- 189: ptmfn AgtkkP qlssc RIR1_ASFM2 : 706- 711: iltkh AaarnP fvsqs RIR1_BPT4 : 110- 115: sycvn AgkydP ellsk RIR1_BPT4 : 210- 215: ptpim AgcrtP trqfs RIR1_BPT4 : 299- 304: irgga AtayyP iwhle RIR1_BPT4 : 379- 384: relye AaekdP nirkk RIR1_BPT4 : 553- 558: asikl AkekgP seyys RIR1_CAEEL : 304- 309: rpgaf AiyleP whadi RIR1_CAEEL : 553- 558: ascel AelngP ystye RIR1_EBV : 79- 84: etrvs AfaqsP ayeri RIR1_EBV : 257- 262: rpvsv AaymeP whsqi RIR1_EBV : 390- 395: aanlc AevlqP srksv RIR1_EBV : 406- 411: atcnl AniclP rclvn RIR1_EBV : 744- 749: eckas AalsvP reeqn RIR1_EBV : 759- 764: nersp AeqmpP rpmep RIR1_EBV : 770- 775: rpmep AqvagP vdims RIR1_ECOLI : 302- 307: vrgga AtlfyP mwhle RIR1_ECOLI : 443- 448: lclei AlptkP lndvn RIR1_ECOLI : 574- 579: netty AkgilP idtyk RIR1_HAEIN : 213- 218: ptpim AgvrtP trqfs RIR1_HAEIN : 302- 307: vrgga AtlyyP iwhle RIR1_HAEIN : 443- 448: lclei AlptkP lqhin RIR1_HAEIN : 574- 579: netty AkgilP idtyk RIR1_HCMVA : 17- 22: vssvp AhrcrP grips RIR1_HSV11 : 98- 103: qdpga AaspaP fvavt RIR1_HSV11 : 122- 127: gtavv AfggtP rrsag RIR1_HSV11 : 146- 151: dvpte AlggpP ppprf RIR1_HSV11 : 264- 269: tpgpg AdaggP savdp RIR1_HSV11 : 333- 338: rflgd AvnreP almle RIR1_HSV11 : 761- 766: ivrsa AttgsP fvmfk RIR1_HSV11 : 1085- 1090: yvtek AdgtlP astlv RIR1_HSV23 : 57- 62: yvtek AdgtlP astlv RIR1_HSVEB : 332- 337: cdnif AcmwtP dlffd RIR1_HSVEB : 456- 461: gvcnl AsinlP kclai RIR1_HSVEB : 690- 695: wsvvg AfgdlP vghpl RIR1_HSVEB : 739- 744: fitep AdgklP askim RIR1_HSVSA : 411- 416: stcnl AnvclP kclns RIR1_HSVSA : 452- 457: vfiin AcilsP sptss RIR1_HSVSA : 652- 657: khflt AfdycP eaqmr RIR1_HSVSA : 664- 669: aqmrr AsiraP yvdqs RIR1_HUMAN : 208- 213: ptlfn AgtnrP qlssc RIR1_HUMAN : 298- 303: rpgaf AiyleP whldi RIR1_HUMAN : 547- 552: ascdl AkeqgP yetye RIR1_MOUSE : 208- 213: ptlfn AgtnrP qlssc RIR1_MOUSE : 298- 303: rpgaf AiyleP whldi RIR1_MOUSE : 547- 552: ascel AkeygP yetye RIR1_SALTY : 302- 307: vrgga AtlfyP mwhle RIR1_SALTY : 443- 448: lclei AlptkP lndvn RIR1_SALTY : 574- 579: netty AkgilP idtyk RIR1_SALTY : 589- 594: kkdld AivneP lhydw RIR1_SCHPO : 208- 213: ptlfn AgtprP qlssc RIR1_SCHPO : 298- 303: rpgaf AayleP whadv RIR1_SCHPO : 447- 452: avcnl AsvalP tfikd RIR1_SCHPO : 667- 672: dgsiq AipeiP qdlkd RIR1_SCHPO : 694- 699: tvidy AadrgP fidqs RIR1_VACCC : 298- 303: rpgvm AiyleP whsdi RIR1_VACCC : 546- 551: ascel AekegP ydtyv RIR1_VACCV : 298- 303: rpgvm AiyleP whsdi RIR1_VACCV : 546- 551: ascel AekegP ydtyv RIR1_VARV : 546- 551: ascel AekegP ydtyv RIR1_VZVD : 397- 402: iirsa AvtgsP flmfk RIR1_VZVD : 483- 488: lngvl AagnfP ckksc RIR1_YEAST : 107- 112: yryvn AatgkP apmis RIR1_YEAST : 208- 213: ptlfn AgtpkP qmssc RIR1_YEAST : 298- 303: rpgaf AlyleP whadi RIR1_YEAST : 325- 330: keeir ArdlfP alwip RIR1_YEAST : 446- 451: avcnl AsvalP afiet RIR1_YEAST : 551- 556: ascel AqkdgP yetfq RIR1_YEAST : 788- 793: sasya AsdfvP aavta RIR1_YEAST : 798- 803: paavt AnatiP sldss RIR3_ECOLI : 4- 9: ppt AhvgaP ftrrg RIR3_SALTY : 45- 50: idaff AthvrP hsvtf RIR3_SALTY : 637- 642: dmyqd AydigP ekiid RIR3_YEAST : 208- 213: ptlfn AgtphP qmssc RIR3_YEAST : 298- 303: rpgaf AlfleP whadi RIR3_YEAST : 325- 330: keeir ArdlfP alwip RIR3_YEAST : 446- 451: avcnl AsialP afvev O 15: 8.3401 98( 24) T-A Occurences: 98(24) RIR1_ASFB7 : 67- 68: qlhqs TA ssfsk RIR1_ASFB7 : 211- 212: ydmvk TA giisg RIR1_ASFB7 : 377- 378: ytgvt TA keiik RIR1_ASFB7 : 609- 610: rngyl TA lmpta RIR1_ASFB7 : 614- 615: talmp TA tssns RIR1_ASFM2 : 68- 69: llhqs TA ssfsk RIR1_ASFM2 : 212- 213: ydmvk TA giisg RIR1_ASFM2 : 378- 379: ytgvt TA keiik RIR1_ASFM2 : 610- 611: rngyl TA lmpta RIR1_ASFM2 : 615- 616: talmp TA tssns RIR1_BPT4 : 284- 285: wkhfq TA vkscs RIR1_BPT4 : 300- 301: rggaa TA yypiw RIR1_BPT4 : 407- 408: tersg TA riyvq RIR1_CAEEL : 69- 70: nlaae TA asmtt RIR1_CAEEL : 288- 289: rvynn TA ryvdq RIR1_CAEEL : 610- 611: mapmp TA staqi RIR1_CAEEL : 613- 614: mptas TA qilgn RIR1_EBV : 335- 336: yyrlv TA gkfcg RIR1_EBV : 526- 527: ehmyf TA lctss RIR1_EBV : 667- 668: ylrfq TA fdynq RIR1_ECOLI : 287- 288: ykhfq TA vkscs RIR1_ECOLI : 720- 721: lkdll TA ykfgv RIR1_HAEIN : 240- 241: dsina TA saivk RIR1_HAEIN : 287- 288: ykyfq TA vkscs RIR1_HAEIN : 617- 618: rnstl TA lmpse RIR1_HAEIN : 720- 721: lkdll TA ykygl RIR1_HCMVA : 285- 286: klaee TA rfvel RIR1_HCMVA : 330- 331: iaval TA aiens RIR1_HCMVA : 679- 680: vaglh TA lmrlg RIR1_HSV11 : 118- 119: gsdgg TA vvafg RIR1_HSV11 : 139- 140: stgtq TA dvpte RIR1_HSV11 : 250- 251: pwsnd TA pldvc RIR1_HSV11 : 310- 311: rlgtg TA ypvpl RIR1_HSV11 : 627- 628: dsgpg TA svmpa RIR1_HSV11 : 873- 874: mqglh TA clklg RIR1_HSV11 : 969- 970: valmp TA asaqi RIR1_HSV11 : 1051- 1052: lrrfk TA fdydq RIR1_HSV23 : 23- 24: lrrfk TA fdydq RIR1_HSVEB : 166- 167: lrlat TA thytm RIR1_HSVEB : 197- 198: fkayf TA lagqv RIR1_HSVEB : 362- 363: tlfdd TA shlch RIR1_HSVEB : 471- 472: ippph TA gvpyf RIR1_HSVEB : 488- 489: graaa TA tifvn RIR1_HSVEB : 526- 527: iqglh TA flmld RIR1_HSVEB : 647- 648: lfskv TA tgevl RIR1_HSVEB : 705- 706: lskfk TA feydq RIR1_HSVSA : 431- 432: ytcsn TA qfdfs RIR1_HSVSA : 509- 510: etmyy TA vktss RIR1_HSVSA : 579- 580: ialmp TA gtsql RIR1_HSVSA : 651- 652: ykhfl TA fdycp RIR1_HUMAN : 63- 64: tlaae TA atltt RIR1_HUMAN : 282- 283: rvynn TA ryvdq RIR1_HUMAN : 604- 605: iapmp TA staqi RIR1_HUMAN : 607- 608: mptas TA qilgn RIR1_HUMAN : 774- 775: ekern TA amvcs RIR1_MOUSE : 63- 64: tlaae TA atltt RIR1_MOUSE : 282- 283: rvynn TA ryvdq RIR1_MOUSE : 604- 605: iapmp TA staqi RIR1_MOUSE : 607- 608: mptas TA qilgn RIR1_MOUSE : 774- 775: ekern TA amvcs RIR1_SALTY : 287- 288: ykhfq TA vkscs RIR1_SALTY : 720- 721: lkdll TA ykfgv RIR1_SCHPO : 19- 20: afdki TA rvsrl RIR1_SCHPO : 63- 64: nlaae TA atmtt RIR1_SCHPO : 244- 245: amisk TA ggigi RIR1_SCHPO : 282- 283: rvynn TA ryvdq RIR1_SCHPO : 603- 604: vapmp TA stsqi RIR1_VACCC : 282- 283: rvynn TA ryidq RIR1_VACCC : 603- 604: vapmp TA staqi RIR1_VACCC : 606- 607: mptas TA qilgn RIR1_VACCV : 282- 283: rvynn TA ryidq RIR1_VACCV : 603- 604: vapmp TA staqi RIR1_VACCV : 606- 607: mptas TA qilgn RIR1_VARV : 60- 61: eldtl TA eiaat RIR1_VARV : 282- 283: rvynn TA ryidq RIR1_VARV : 603- 604: vapmp TA staqi RIR1_VARV : 606- 607: mptas TA qilgn RIR1_VZVD : 189- 190: crvff TA lacqk RIR1_VZVD : 213- 214: retga TA scylm RIR1_VZVD : 470- 471: ndlql TA rttvi RIR1_VZVD : 690- 691: llkyk TA feyeq RIR1_YEAST : 19- 20: qfdki TA risrl RIR1_YEAST : 244- 245: alisk TA ggigl RIR1_YEAST : 282- 283: rvfnn TA ryvdq RIR1_YEAST : 440- 441: sapde TA vcnla RIR1_YEAST : 608- 609: mapmp TA stsqi RIR1_YEAST : 797- 798: vpaav TA natip RIR3_ECOLI : 3- 4: pp TA hvgap RIR3_SALTY : 436- 437: grtve TA irglt RIR3_SALTY : 442- 443: airgl TA vsdms RIR3_SALTY : 545- 546: dwqpk TA kvral RIR3_SALTY : 669- 670: lffpd TA ttrdi RIR3_YEAST : 244- 245: amisk TA ggvgl RIR3_YEAST : 282- 283: rvfnn TA ryvdq RIR3_YEAST : 440- 441: sspde TA vcnla RIR3_YEAST : 462- 463: sedgk TA synfe RIR3_YEAST : 608- 609: mapmp TA stsqi RIR3_YEAST : 857- 858: kviac TA ptpea P 16: 7.8401 113( 24) T-x(0,1)-E Occurences: 113(24) RIR1_ASFB7 : 468- 469: asgnv T-E nldni RIR1_ASFB7 : 482- 483: ngyyp T-E atrrs RIR1_ASFB7 : 662- 663: eidlw T-E aiqqq RIR1_ASFM2 : 469- 470: aagnv T-E nldni RIR1_ASFM2 : 483- 484: ngyyp T-E atrrs RIR1_BPT4 : 402- 403: fellm T-E rsgta RIR1_BPT4 : 534- 536: dandl ThE lferl RIR1_CAEEL : 59- 61: ykgvt TvE ldnla RIR1_CAEEL : 156- 158: yfgfk TlE rsyll RIR1_CAEEL : 436- 437: csnlc T-E iieys RIR1_CAEEL : 462- 464: lnryv TpE kkfdf RIR1_CAEEL : 561- 563: ngpys TyE gspvs RIR1_CAEEL : 658- 660: erglw TdE mknrl RIR1_EBV : 818- 819: etdgf T-E races RIR1_ECOLI : 14- 15: krdgs T-E rinld RIR1_ECOLI : 124- 125: lledy T-E eefkq RIR1_ECOLI : 124- 126: lledy TeE efkqm RIR1_ECOLI : 162- 164: vqnrv TgE iyesa RIR1_ECOLI : 543- 545: nlthk TfE aiqyy RIR1_HAEIN : 13- 15: tkrdg TqE qinld RIR1_HAEIN : 124- 126: llddy TrE ewdtm RIR1_HAEIN : 162- 164: vqnrv TgE iyesa RIR1_HAEIN : 543- 545: dlthr TfE aiqyy RIR1_HAEIN : 591- 593: dldsl TqE plhyd RIR1_HCMVA : 32- 33: srsae T-E teess RIR1_HCMVA : 34- 35: saete T-E essae RIR1_HCMVA : 34- 36: saete TeE ssaev RIR1_HCMVA : 474- 476: ilkes TsE ltgvc RIR1_HCMVA : 639- 640: lrelv T-E avvwg RIR1_HSV11 : 144- 145: tadvp T-E alggp RIR1_HSV11 : 278- 280: dphap TpE agagl RIR1_HSV11 : 319- 321: vplel TpE naeav RIR1_HSV11 : 368- 369: spprl T-E ddfgl RIR1_HSV11 : 437- 439: hlrir TrE asfee RIR1_HSV11 : 458- 459: ldfgl T-E rlreh RIR1_HSV11 : 794- 795: gsnlc T-E ivhpa RIR1_HSV11 : 1082- 1083: mtlyv T-E kadgt RIR1_HSV23 : 54- 55: mtlyv T-E kadgt RIR1_HSVEB : 95- 96: ywlns T-E ialne RIR1_HSVEB : 171- 173: tathy TmE epama RIR1_HSVEB : 439- 440: gsnlc T-E iiqha RIR1_HSVEB : 604- 605: wrrlr T-E ikqhg RIR1_HSVEB : 629- 630: sssqv T-E ssegf RIR1_HSVEB : 649- 651: skvta TgE vlrpn RIR1_HSVEB : 679- 681: lqals TlE maqws RIR1_HSVEB : 736- 737: mslfi T-E padgk RIR1_HSVSA : 41- 42: mdmss T-E tisqy RIR1_HSVSA : 107- 108: vlppr T-E mngky RIR1_HSVSA : 201- 202: aptld T-E kstis RIR1_HSVSA : 682- 683: ltlfl T-E envqs RIR1_HSVSA : 682- 684: ltlfl TeE nvqsa RIR1_HSVSA : 752- 753: pdshk T-E dacpl RIR1_HUMAN : 53- 55: ysgvt TvE ldtla RIR1_HUMAN : 150- 152: yfgfk TlE rsyll RIR1_HUMAN : 398- 399: iiesq T-E tgtpy RIR1_HUMAN : 430- 431: csnlc T-E iveyt RIR1_HUMAN : 456- 458: lnmyv TsE htydf RIR1_HUMAN : 555- 557: qgpye TyE gspvs RIR1_HUMAN : 646- 647: llkdl T-E rglwh RIR1_MOUSE : 53- 55: ysgvt TvE ldtla RIR1_MOUSE : 150- 152: yfgfk TlE rsyll RIR1_MOUSE : 398- 399: iiesq T-E tgtpy RIR1_MOUSE : 430- 431: csnlc T-E iveyt RIR1_MOUSE : 456- 458: lnmyv TpE htydf RIR1_MOUSE : 555- 557: ygpye TyE gspvs RIR1_MOUSE : 646- 647: llkdl T-E rglwn RIR1_SALTY : 14- 15: krdgr T-E rinld RIR1_SALTY : 124- 125: lledy T-E eefkq RIR1_SALTY : 124- 126: lledy TeE efkqm RIR1_SALTY : 162- 164: vqnrv TgE iyesa RIR1_SALTY : 543- 545: nlthk TfE aiqyy RIR1_SCHPO : 53- 55: ypgvt TiE ldnla RIR1_SCHPO : 90- 91: nlhkq T-E kvfst RIR1_SCHPO : 150- 152: ffgfk TlE rsyll RIR1_SCHPO : 430- 431: ssnlc T-E iveys RIR1_SCHPO : 551- 553: aqveg TyE syegs RIR1_SCHPO : 784- 786: isaep TkE eidiy RIR1_VACCC : 53- 55: yngvt TvE ldtla RIR1_VACCC : 150- 152: yfgfk TlE ksyll RIR1_VACCC : 430- 431: csnlc T-E iiqya RIR1_VACCC : 645- 646: llrvl T-E rklwn RIR1_VACCV : 53- 55: yngvt TvE ldtla RIR1_VACCV : 150- 152: yfgfk TlE ksyll RIR1_VACCV : 430- 431: csnlc T-E iiqya RIR1_VACCV : 645- 646: llrvl T-E rklwn RIR1_VARV : 53- 55: yngvt TvE ldtlt RIR1_VARV : 60- 62: eldtl TaE iaatc RIR1_VARV : 150- 152: yfgfk TlE ksyll RIR1_VARV : 430- 431: csnlc T-E iiqya RIR1_VARV : 645- 646: llrvl T-E rklwn RIR1_VZVD : 158- 160: laatv TtE ivnlp RIR1_VZVD : 159- 160: aatvt T-E ivnlp RIR1_VZVD : 259- 260: lnlip T-E nqtkg RIR1_VZVD : 430- 431: gsnlc T-E ivqka RIR1_VZVD : 560- 561: pfkgf T-E skyak RIR1_VZVD : 614- 615: ssaqv T-E csegf RIR1_YEAST : 53- 55: yegvt TiE ldnla RIR1_YEAST : 150- 152: yfgfk TlE rsyll RIR1_YEAST : 397- 398: ileaq T-E tgtpf RIR1_YEAST : 456- 458: pafie TsE dgkts RIR1_YEAST : 765- 766: iadqa T-E nvadi RIR1_YEAST : 863- 864: vddee T-E fdiyn RIR3_ECOLI : 19- 21: gitlp TrE mw RIR3_SALTY : 4- 6: att TpE rvmqe RIR3_SALTY : 148- 150: latql TdE mlsgr RIR3_SALTY : 433- 435: pdigr TvE tairg RIR3_SALTY : 561- 563: gitlp TrE mwlkl RIR3_SALTY : 627- 629: papfm TnE nldmy RIR3_SALTY : 703- 704: laleg T-E iegcv RIR3_YEAST : 53- 55: ysgvt TvE ldnla RIR3_YEAST : 150- 152: yfgfk TlE rsyll RIR3_YEAST : 397- 398: ilqaq T-E tgtpf RIR3_YEAST : 543- 545: tiyha TlE ascel RIR3_YEAST : 559- 561: egkys TfE gspas RIR3_YEAST : 796- 797: aasal T-E ssdne RIR3_YEAST : 834- 835: apavp T-E tiked RIR3_YEAST : 860- 862: actap TpE acesc Q 17: 7.8401 115( 24) L-x(0,1)-P Occurences: 115(24) RIR1_ASFB7 : 86- 88: qscsr LsP qfvdv RIR1_ASFB7 : 265- 267: anqgg LrP gayav RIR1_ASFB7 : 560- 562: askgl LqP dlwvr RIR1_ASFB7 : 611- 613: gylta LmP tatss RIR1_ASFM2 : 266- 268: anqgg LrP gayav RIR1_ASFM2 : 561- 563: askgl LqP dlwvr RIR1_ASFM2 : 572- 574: vrcgd LiP swenr RIR1_ASFM2 : 588- 590: ttqgv LtP kkwwq RIR1_ASFM2 : 612- 614: gylta LmP tatss RIR1_BPT4 : 204- 205: trqis L-P tpima RIR1_BPT4 : 572- 573: wsrge L-P idwyn RIR1_BPT4 : 613- 615: stlsa LmP cesss RIR1_CAEEL : 278- 280: gtsng LiP mlrvy RIR1_CAEEL : 307- 309: afaiy LeP whadi RIR1_CAEEL : 408- 409: qietg L-P yityk RIR1_EBV : 275- 276: fletk L-P enher RIR1_EBV : 393- 395: lcaev LqP srksv RIR1_EBV : 410- 411: lanic L-P rclvn RIR1_EBV : 437- 438: ellla L-P rlsvt RIR1_EBV : 444- 445: rlsvt L-P gegav RIR1_EBV : 592- 594: sqfia LmP tsgca RIR1_EBV : 626- 628: nkeea LrP nrsfw RIR1_EBV : 654- 655: grvsc L-P ealrq RIR1_ECOLI : 207- 208: tfkis L-P tpims RIR1_ECOLI : 444- 445: cleia L-P tkpln RIR1_ECOLI : 578- 579: yakgi L-P idtyk RIR1_ECOLI : 619- 621: stlsa LmP setss RIR1_ECOLI : 745- 747: daqdd LvP siqdd RIR1_HAEIN : 207- 208: tfkis L-P tpima RIR1_HAEIN : 444- 445: cleia L-P tkplq RIR1_HAEIN : 578- 579: yakgi L-P idtyk RIR1_HAEIN : 619- 621: stlta LmP setss RIR1_HCMVA : 58- 59: leegp L-P ggdke RIR1_HCMVA : 191- 192: epare L-P sdrna RIR1_HCMVA : 278- 279: rhmed L-P klaee RIR1_HCMVA : 575- 576: adsvc L-P pclsp RIR1_HCMVA : 575- 577: adsvc LpP clspd RIR1_HCMVA : 579- 581: clppc LsP dmasc RIR1_HCMVA : 617- 618: eqklh L-P dvvlg RIR1_HCMVA : 667- 669: salek LrP lhigv RIR1_HCMVA : 718- 719: lcksg L-P rcewf RIR1_HCMVA : 741- 742: felyr L-P rlsia RIR1_HCMVA : 803- 805: etvws LcP pnrec RIR1_HSV11 : 318- 320: pvple LtP enaea RIR1_HSV11 : 658- 660: gacvy LeP whtdv RIR1_HSV11 : 848- 850: midst LqP tpqct RIR1_HSV11 : 966- 968: sqfva LmP taasa RIR1_HSV11 : 1000- 1002: rdget LrP ntlll RIR1_HSV11 : 1037- 1038: svaqa L-P clept RIR1_HSV11 : 1040- 1042: qalpc LeP thplr RIR1_HSV11 : 1089- 1090: kadgt L-P astlv RIR1_HSV23 : 9- 10: svaqa L-P cldpa RIR1_HSV23 : 12- 14: qalpc LdP ahplr RIR1_HSV23 : 61- 62: kadgt L-P astlv RIR1_HSVEB : 38- 39: elstt L-P prpsr RIR1_HSVEB : 38- 40: elstt LpP rpsrs RIR1_HSVEB : 58- 60: rvvdt LkP rcrvd RIR1_HSVEB : 204- 206: lagqv LiP atpim RIR1_HSVEB : 227- 229: ascyl LnP rvtdm RIR1_HSVEB : 460- 461: lasin L-P kclai RIR1_HSVEB : 583- 584: yslge L-P fdsyp RIR1_HSVEB : 653- 655: atgev LrP nlllm RIR1_HSVEB : 694- 695: gafgd L-P vghpl RIR1_HSVEB : 743- 744: padgk L-P askim RIR1_HSVSA : 55- 57: lfgpl LeP hilef RIR1_HSVSA : 92- 93: rncgi L-P akrfy RIR1_HSVSA : 103- 104: ydtyv L-P prtem RIR1_HSVSA : 103- 105: ydtyv LpP rtemn RIR1_HSVSA : 213- 215: sifge LaP llasr RIR1_HSVSA : 280- 281: flsak L-P enpdr RIR1_HSVSA : 415- 416: lanvc L-P kclns RIR1_HSVSA : 455- 457: inaci LsP sptss RIR1_HSVSA : 576- 578: sqfia LmP tagts RIR1_HSVSA : 746- 747: dlare L-P dshkt RIR1_HUMAN : 272- 274: gnsng LvP mlrvy RIR1_HUMAN : 301- 303: afaiy LeP whldi RIR1_MOUSE : 272- 274: gnsng LvP mlrvy RIR1_MOUSE : 301- 303: afaiy LeP whldi RIR1_SALTY : 207- 208: tfkis L-P tpims RIR1_SALTY : 444- 445: cleia L-P tkpln RIR1_SALTY : 578- 579: yakgi L-P idtyk RIR1_SALTY : 619- 621: stlsa LmP setss RIR1_SALTY : 745- 747: daqdd LaP siqdd RIR1_SCHPO : 301- 303: afaay LeP whadv RIR1_SCHPO : 384- 385: rgrrs L-P aqkvw RIR1_SCHPO : 451- 452: lasva L-P tfikd RIR1_SCHPO : 516- 517: ffalr L-P fesag RIR1_VACCC : 301- 303: vmaiy LeP whsdi RIR1_VACCC : 670- 671: iqntn L-P edikr RIR1_VACCV : 301- 303: vmaiy LeP whsdi RIR1_VACCV : 670- 671: iqntn L-P edikr RIR1_VARV : 301- 303: vmtiy LeP whsdi RIR1_VARV : 670- 671: iqntn L-P edikr RIR1_VZVD : 88- 90: spilc LtP rvrqa RIR1_VZVD : 108- 110: irrai LeP flkdq RIR1_VZVD : 164- 165: teivn L-P kiatl RIR1_VZVD : 170- 172: pkiat LiP gindg RIR1_VZVD : 256- 258: lqsln LiP tenqt RIR1_VZVD : 553- 555: ckigg LaP fkgft RIR1_VZVD : 582- 583: isyld L-P wctlr RIR1_VZVD : 604- 606: sqfla LmP tvssa RIR1_VZVD : 638- 640: tsgel LrP nldlm RIR1_YEAST : 29- 31: rlcyg LdP khida RIR1_YEAST : 272- 274: gtsng LiP mirvf RIR1_YEAST : 301- 303: afaly LeP whadi RIR1_YEAST : 328- 330: irard LfP alwip RIR1_YEAST : 450- 451: lasva L-P afiet RIR1_YEAST : 521- 522: fmllr L-P fdsee RIR1_YEAST : 673- 674: gsiqg L-P nvpqe RIR3_ECOLI : 17- 18: rrgit L-P tremw RIR3_SALTY : 559- 560: rsgit L-P tremw RIR3_YEAST : 29- 31: rlsyg LdP nrida RIR3_YEAST : 272- 274: gtsng LiP mirvf RIR3_YEAST : 301- 303: afalf LeP whadi RIR3_YEAST : 328- 330: irard LfP alwip RIR3_YEAST : 450- 451: lasia L-P afvev RIR3_YEAST : 521- 522: ymmlr L-P fesee RIR3_YEAST : 673- 674: gsiqg L-P nvpqe R 18: 7.8401 162( 24) I-x(1,2)-L Occurences: 162(24) RIR1_ASFB7 : 6- 9: metff IetL asdvy RIR1_ASFB7 : 161- 163: vnikm Il-L tydll RIR1_ASFB7 : 222- 224: ggggg Ig-L clsgi RIR1_ASFB7 : 250- 252: giqny Im-L qnasq RIR1_ASFB7 : 538- 540: amrrs Ie-L akekg RIR1_ASFB7 : 645- 647: lsgef Iv-L nkyli RIR1_ASFB7 : 652- 655: lnkyl IddL keidl RIR1_ASFB7 : 658- 660: ddlke Id-L wteai RIR1_ASFM2 : 162- 164: vnmkm Il-L tydll RIR1_ASFM2 : 223- 225: ggggg Ig-L clsgi RIR1_ASFM2 : 251- 253: giqny Iv-L qnasq RIR1_ASFM2 : 539- 541: amrrs Ie-L akekg RIR1_ASFM2 : 646- 648: lsgef Ii-L nkylm RIR1_ASFM2 : 659- 661: ddlee In-L wsedi RIR1_BPT4 : 22- 25: dpqki IkvL swaae RIR1_BPT4 : 126- 129: ysaee ItfL eskik RIR1_BPT4 : 202- 204: vstrq Is-L ptpim RIR1_BPT4 : 305- 308: tayyp IwhL evenl RIR1_BPT4 : 350- 352: gkndy It-L fsphe RIR1_BPT4 : 454- 456: spdae Ig-L ctlsa RIR1_BPT4 : 475- 478: qdqdk IneL aevqv RIR1_BPT4 : 550- 552: likas Ik-L akekg RIR1_BPT4 : 657- 659: niehn Id-L ydytw RIR1_BPT4 : 680- 682: ltqva Im-L kwvcq RIR1_CAEEL : 28- 31: kitsr IqkL sygln RIR1_CAEEL : 50- 53: vaikv IsgL ykgvt RIR1_CAEEL : 254- 256: ksagg Ig-L nvhki RIR1_CAEEL : 279- 282: tsngl IpmL rvynn RIR1_CAEEL : 305- 307: pgafa Iy-L epwha RIR1_CAEEL : 340- 343: flalw IpdL fmkrv RIR1_CAEEL : 455- 457: cnlas Ia-L nryvt RIR1_CAEEL : 507- 509: mrhrp Ig-L gvqgl RIR1_CAEEL : 682- 685: gipsd IkeL yrtvw RIR1_EBV : 16- 19: llskl IdeL kvkan RIR1_EBV : 232- 234: qdgkh Is-L lmrmi RIR1_EBV : 232- 235: qdgkh IslL mrmin RIR1_EBV : 345- 348: cgrvs IksL mfsiv RIR1_EBV : 364- 366: agspf Il-L keacn RIR1_EBV : 408- 410: cnlan Ic-L prclv RIR1_EBV : 534- 536: ctssl Ig-L htrki RIR1_EBV : 590- 592: fnsqf Ia-L mptsg RIR1_ECOLI : 17- 19: gster In-L dkihr RIR1_ECOLI : 86- 89: aarla IfhL rkkay RIR1_ECOLI : 205- 207: vstfk Is-L ptpim RIR1_ECOLI : 261- 264: inagr IraL gspir RIR1_ECOLI : 339- 342: dygvq InkL mytrl RIR1_ECOLI : 353- 355: lkged It-L fspsd RIR1_ECOLI : 442- 444: nlcle Ia-L ptkpl RIR1_ECOLI : 459- 461: denge Ia-L ctlsa RIR1_ECOLI : 472- 475: fnlga InnL delee RIR1_HAEIN : 17- 19: gtqeq In-L dkihr RIR1_HAEIN : 86- 89: aarla IfhL rkkay RIR1_HAEIN : 205- 207: tstfk Is-L ptpim RIR1_HAEIN : 261- 264: inaga IraL gseir RIR1_HAEIN : 308- 311: tlyyp IwhL eaenl RIR1_HAEIN : 353- 355: ikgse It-L fspsd RIR1_HAEIN : 398- 401: vkave IfsL lmqer RIR1_HAEIN : 442- 444: nlcle Ia-L ptkpl RIR1_HAEIN : 459- 461: denge Ia-L ctlsa RIR1_HAEIN : 472- 475: fnlgk IenL delee RIR1_HCMVA : 301- 304: glyaa IlcL dkvcr RIR1_HCMVA : 431- 434: dvnsv IrcL ggycd RIR1_HCMVA : 735- 738: qegkf IfeL yrlpr RIR1_HSV11 : 538- 540: rgmrh Ia-L gregs RIR1_HSV11 : 613- 615: arngg Ig-L cvqaf RIR1_HSV11 : 701- 704: ffkrl IrhL dgekn RIR1_HSV11 : 749- 752: geqip IqeL aygiv RIR1_HSV11 : 1061- 1063: dqkll Id-L cadra RIR1_HSV23 : 33- 35: dqell Id-L cadra RIR1_HSVEB : 97- 99: lnste Ia-L neive RIR1_HSVEB : 210- 212: ipatp Im-L fggrd RIR1_HSVEB : 255- 257: cnrgg Ig-L slqrf RIR1_HSVEB : 458- 460: cnlas In-L pkcla RIR1_HSVEB : 521- 524: slglg IqgL htafl RIR1_HSVEB : 748- 751: lpask ImsL lvhay RIR1_HSVSA : 7- 10: sqeti IsnL idmlk RIR1_HSVSA : 11- 14: iisnl IdmL kvsag RIR1_HSVSA : 557- 559: pmkqw Ih-L qdnik RIR1_HSVSA : 574- 576: fnsqf Ia-L mptag RIR1_HSVSA : 614- 617: imkpn ItfL knvkp RIR1_HSVSA : 737- 739: kkdaq Iv-L adlar RIR1_HUMAN : 22- 25: kitsr IqkL cygln RIR1_HUMAN : 44- 47: itmkv IqgL ysgvt RIR1_HUMAN : 123- 125: kstld Iv-L ankdr RIR1_HUMAN : 299- 301: pgafa Iy-L epwhl RIR1_HUMAN : 334- 337: ffalw IpdL fmkrv RIR1_MOUSE : 22- 25: kitsr IqkL cygln RIR1_MOUSE : 44- 47: itmkv IqgL ysgvt RIR1_MOUSE : 299- 301: pgafa Iy-L epwhl RIR1_MOUSE : 334- 337: ffalw IpdL fmkrv RIR1_SALTY : 17- 19: grter In-L dkihr RIR1_SALTY : 86- 89: aarla IfhL rkkaf RIR1_SALTY : 205- 207: vstfk Is-L ptpim RIR1_SALTY : 261- 264: inagr IraL gspir RIR1_SALTY : 339- 342: dygvq InkL mytrl RIR1_SALTY : 353- 355: lkggd It-L fspsd RIR1_SALTY : 442- 444: nlcle Ia-L ptkpl RIR1_SALTY : 459- 461: denge Ia-L ctlsa RIR1_SALTY : 472- 475: fnlga IktL delee RIR1_SCHPO : 54- 56: pgvtt Ie-L dnlaa RIR1_SCHPO : 334- 337: fyalw IpdL fmqrv RIR1_SCHPO : 709- 711: sqsln Ih-L kdpsy RIR1_VACCC : 22- 25: kitsr IrkL cygln RIR1_VACCC : 248- 250: kmagg Ig-L sisni RIR1_VACCC : 273- 276: isngi IpmL rvynn RIR1_VACCC : 299- 301: pgvma Iy-L epwhs RIR1_VACCC : 330- 332: trdlf Ia-L wipdl RIR1_VACCC : 334- 337: fialw IpdL fmkrv RIR1_VACCC : 512- 514: ladaf Il-L nypfd RIR1_VACCC : 755- 758: ldkdk IkpL vvcds RIR1_VACCV : 22- 25: kitsr IrkL cygln RIR1_VACCV : 248- 250: kmagg Ig-L sisni RIR1_VACCV : 273- 276: isngi IpmL rvynn RIR1_VACCV : 299- 301: pgvma Iy-L epwhs RIR1_VACCV : 330- 332: trdlf Ia-L wipdl RIR1_VACCV : 334- 337: fialw IpdL fmkrv RIR1_VACCV : 512- 514: ladaf Il-L nypfd RIR1_VARV : 22- 25: kitsr IrkL cygln RIR1_VARV : 248- 250: kmagg Ig-L sisni RIR1_VARV : 273- 276: asngi IpmL rvynn RIR1_VARV : 299- 301: pgvmt Iy-L epwhs RIR1_VARV : 330- 332: trdlf Ia-L wipdl RIR1_VARV : 334- 337: fialw IpdL fmkrv RIR1_VARV : 449- 451: cnlas Ia-L nmfvi RIR1_VARV : 512- 514: ladaf Il-L nypfd RIR1_VARV : 755- 758: ldkdk IkpL vvcds RIR1_VZVD : 14- 17: tvhdi InrL cqhgy RIR1_VZVD : 70- 72: lihcr In-L rsvsm RIR1_VZVD : 85- 88: wltsp IlcL tprvr RIR1_VZVD : 161- 164: tvtte IvnL pkiat RIR1_VZVD : 167- 170: vnlpk IatL ipgin RIR1_VZVD : 249- 251: rggvg Is-L qslnl RIR1_VZVD : 449- 451: cnlas In-L ttcls RIR1_VZVD : 476- 478: arttv If-L ngvla RIR1_VZVD : 506- 509: slgig IqgL httcl RIR1_VZVD : 532- 535: rlnvq IaeL mlyet RIR1_VZVD : 550- 553: memck IggL apfkg RIR1_VZVD : 577- 580: dgfst IsyL dlpwc RIR1_VZVD : 662- 665: krlev IniL eknqw RIR1_VZVD : 733- 736: ipask ImnL liray RIR1_YEAST : 22- 25: kitar IsrL cygld RIR1_YEAST : 54- 56: egvtt Ie-L dnlaa RIR1_YEAST : 83- 86: aaria IsnL hkqtt RIR1_YEAST : 248- 250: ktagg Ig-L hihni RIR1_YEAST : 334- 337: fpalw IpdL fmkrv RIR1_YEAST : 505- 507: mrhrp Ia-L gvqgl RIR1_YEAST : 670- 673: tqngs IqgL pnvpq RIR1_YEAST : 771- 774: envad IsnL krpsy RIR1_YEAST : 802- 805: tanat IpsL dssse RIR3_ECOLI : 15- 17: ftrrg It-L ptrem RIR3_SALTY : 282- 285: dekir IktL slgvv RIR3_SALTY : 438- 441: tveta IrgL tavsd RIR3_SALTY : 466- 468: aasha Ig-L gqmnl RIR3_SALTY : 557- 559: farsg It-L ptrem RIR3_SALTY : 687- 690: awrkg IksL yyirl RIR3_SALTY : 693- 695: kslyy Ir-L rqlal RIR3_YEAST : 22- 25: kitsr ItrL sygld RIR3_YEAST : 83- 86: aaria IsnL hkqtt RIR3_YEAST : 98- 101: qfskv IedL hdwin RIR3_YEAST : 334- 337: fpalw IpdL fmkrv RIR3_YEAST : 448- 450: cnlas Ia-L pafve RIR3_YEAST : 505- 507: mkhrp Ia-L gvqgl RIR3_YEAST : 670- 673: tqngs IqgL pnvpq S 19: 7.8401 140( 24) I-x(2,3)-T Occurences: 140(24) RIR1_ASFB7 : 161- 164: vnikm Ill-T ydlls RIR1_ASFB7 : 422- 425: nsnlc Iev-T ipcwe RIR1_ASFB7 : 658- 662: ddlke IdlwT eaiqq RIR1_ASFM2 : 162- 165: vnmkm Ill-T ydlls RIR1_ASFM2 : 423- 426: nsnlc Iei-T ipcwe RIR1_BPT4 : 163- 166: kttgq Iye-T pqfaf RIR1_BPT4 : 202- 206: vstrq IslpT pimag RIR1_BPT4 : 415- 418: iyvqf Idn-T nnytp RIR1_BPT4 : 440- 444: nlcce IaipT ndvns RIR1_BPT4 : 454- 458: spdae IglcT lsafv RIR1_BPT4 : 605- 609: lklfg IrnsT lsalm RIR1_CAEEL : 122- 126: khapm IsdeT waiie RIR1_CAEEL : 237- 240: dsilg Iyd-T lkqca RIR1_CAEEL : 261- 264: lnvhk Ira-T gsvia RIR1_CAEEL : 268- 271: atgsv Iag-T ngtsn RIR1_CAEEL : 537- 540: dlnkr Ife-T iyyaa RIR1_CAEEL : 623- 627: gnnes IepyT sniys RIR1_EBV : 188- 191: tlasc Ilt-T pdlss RIR1_EBV : 534- 538: ctssl IglhT rkifp RIR1_ECOLI : 58- 61: iktsd Ihe-T iikaa RIR1_ECOLI : 205- 209: vstfk IslpT pimsg RIR1_ECOLI : 237- 240: dslds Ina-T ssaiv RIR1_ECOLI : 442- 446: nlcle IalpT kplnd RIR1_ECOLI : 459- 463: denge IalcT lsafn RIR1_ECOLI : 628- 632: etssq IsnaT ngiep RIR1_ECOLI : 693- 697: fidqs IsanT nydps RIR1_HAEIN : 58- 61: irtsd Ihe-T iikaa RIR1_HAEIN : 205- 209: tstfk IslpT pimag RIR1_HAEIN : 237- 240: dslds Ina-T asaiv RIR1_HAEIN : 388- 392: eqdpt IrkrT vkave RIR1_HAEIN : 442- 446: nlcle IalpT kplqh RIR1_HAEIN : 459- 463: denge IalcT lsafn RIR1_HAEIN : 628- 632: etssq IsnaT ngiep RIR1_HAEIN : 693- 697: fvdqa IsanT nydpk RIR1_HCMVA : 159- 162: kvspp Iqa-T rmlmg RIR1_HSV11 : 482- 485: hydcl Ihs-T phtlv RIR1_HSV11 : 562- 566: lydhq IvpsT pamln RIR1_HSV11 : 779- 782: vnrhy Iyd-T qgaai RIR1_HSV11 : 844- 847: mvnim Ids-T lqptp RIR1_HSV23 : 102- 105: agddn Ivc-T scal RIR1_HSVEB : 114- 117: dhldf Iqr-T lhafe RIR1_HSVEB : 205- 208: agqvl Ipa-T pimlf RIR1_HSVEB : 281- 285: allkl IdsmT mains RIR1_HSVEB : 769- 773: myyck IkkaT nngvf RIR1_HSVSA : 194- 198: lsscf IiapT ldtek RIR1_HSVSA : 195- 198: sscfi Iap-T ldtek RIR1_HSVSA : 361- 364: slint Iik-T gspyv RIR1_HSVSA : 502- 505: cldrd Ife-T myyta RIR1_HUMAN : 231- 234: dsieg Iyd-T lkqca RIR1_HUMAN : 255- 258: vavsc Ira-T gsyia RIR1_HUMAN : 262- 265: atgsy Iag-T ngnsn RIR1_HUMAN : 394- 398: lwyai IesqT etgtp RIR1_HUMAN : 432- 436: nlcte IveyT skdev RIR1_HUMAN : 531- 534: llnkq Ife-T iyyga RIR1_HUMAN : 617- 621: gnnes IepyT sniyt RIR1_HUMAN : 686- 690: ktvwe IsqkT vlkma RIR1_HUMAN : 748- 751: paanp Iqf-T lnkek RIR1_MOUSE : 231- 234: dsieg Iyd-T lkqca RIR1_MOUSE : 255- 258: vavsc Ira-T gsyia RIR1_MOUSE : 262- 265: atgsy Iag-T ngnsn RIR1_MOUSE : 394- 398: lwyai IesqT etgtp RIR1_MOUSE : 432- 436: nlcte IveyT skdev RIR1_MOUSE : 531- 534: llnkq Ife-T iyyga RIR1_MOUSE : 617- 621: gnnes IepyT sniyt RIR1_MOUSE : 686- 690: ktvwe IsqkT vlkma RIR1_MOUSE : 748- 751: paanp Iqf-T lnkek RIR1_SALTY : 58- 61: iktsd Ihe-T iikaa RIR1_SALTY : 205- 209: vstfk IslpT pimsg RIR1_SALTY : 237- 240: dslds Ina-T ssaiv RIR1_SALTY : 442- 446: nlcle IalpT kplnd RIR1_SALTY : 459- 463: denge IalcT lsafn RIR1_SALTY : 628- 632: etssq IsnaT ngiep RIR1_SALTY : 693- 697: fidqs IsanT nydps RIR1_SCHPO : 231- 234: dsieg Iyd-T lkmca RIR1_SCHPO : 241- 244: kmcam Isk-T aggig RIR1_SCHPO : 255- 258: iyihn Ira-T gsyia RIR1_SCHPO : 262- 265: atgsy Iag-T ngtsn RIR1_SCHPO : 530- 533: klniq Ife-T iyhaa RIR1_SCHPO : 685- 689: ktvwe IsqkT vidya RIR1_SCHPO : 747- 750: aasaa Ikf-T vdpva RIR1_VACCC : 63- 66: tlaae Iaa-T cttqh RIR1_VACCC : 116- 120: khspi IssiT mdivn RIR1_VACCC : 231- 234: dsieg Iyd-T lkrca RIR1_VACCC : 262- 265: asgsy Isg-T ngisn RIR1_VACCC : 398- 402: iiesq IetgT pfily RIR1_VACCC : 530- 533: dlnkk Ife-T iyyga RIR1_VACCC : 665- 668: adggs Iqn-T nlped RIR1_VACCC : 684- 688: ktiwe IpqkT iikma RIR1_VACCC : 746- 749: pasap Iqf-T ldkdk RIR1_VACCV : 63- 66: tlaae Iaa-T cttqh RIR1_VACCV : 116- 120: khspi IssiT mdivn RIR1_VACCV : 231- 234: dsieg Iyd-T lkrca RIR1_VACCV : 262- 265: asgsy Isg-T ngisn RIR1_VACCV : 398- 402: iiesq IetgT pfily RIR1_VACCV : 530- 533: dlnkk Ife-T iyyga RIR1_VACCV : 665- 668: adggs Iqn-T nlped RIR1_VACCV : 684- 688: ktiwe IpqkT iikma RIR1_VACCV : 746- 749: pasap Iqf-T ldkdk RIR1_VARV : 63- 66: tltae Iaa-T cttqh RIR1_VARV : 116- 120: khspi IssiT mdvvn RIR1_VARV : 231- 234: dsieg Iyd-T lkrca RIR1_VARV : 262- 265: asgsy Isg-T ngasn RIR1_VARV : 398- 402: iiesq IetgT pfily RIR1_VARV : 530- 533: dlnkk Ife-T iyyga RIR1_VARV : 665- 668: vdggs Iqn-T nlped RIR1_VARV : 684- 688: ktiwe IpqkT iikma RIR1_VARV : 746- 749: pasap Iqf-T ldkdk RIR1_VZVD : 6- 9: mefkr Ifn-T vhdii RIR1_VZVD : 85- 89: wltsp IlclT prvrq RIR1_VZVD : 196- 200: lacqk IvpaT pvmmf RIR1_VZVD : 357- 360: dnrad Ilr-T lhgea RIR1_VZVD : 388- 391: vpiqd Iaf-T iirsa RIR1_VZVD : 449- 452: cnlas Inl-T tclsk RIR1_VZVD : 449- 453: cnlas InltT clskg RIR1_VZVD : 754- 758: myyck IrkaT nsglf RIR1_YEAST : 231- 234: dsieg Iyd-T lkeca RIR1_YEAST : 241- 244: kecal Isk-T aggig RIR1_YEAST : 255- 258: lhihn Irs-T gsyia RIR1_YEAST : 262- 265: stgsy Iag-T ngtsn RIR1_YEAST : 535- 538: llniq Ife-T iyhas RIR1_YEAST : 690- 694: ktvwe IsqkT iinma RIR1_YEAST : 752- 755: aasaa Iqf-T idqki RIR3_ECOLI : 15- 19: ftrrg ItlpT remw RIR3_SALTY : 280- 284: nadek IrikT lslgv RIR3_SALTY : 291- 295: slgvv IpdiT frlak RIR3_SALTY : 430- 433: mdspd Igr-T vetai RIR3_SALTY : 438- 442: tveta IrglT avsdm RIR3_SALTY : 557- 561: farsg ItlpT remwl RIR3_SALTY : 594- 598: gsisy InhaT ssihp RIR3_SALTY : 645- 648: igpek Iid-T yaeat RIR3_YEAST : 105- 109: dlhdw InpaT gkhap RIR3_YEAST : 231- 234: dsieg Iyd-T lkeca RIR3_YEAST : 241- 244: kecam Isk-T aggvg RIR3_YEAST : 255- 258: lhinn Irs-T gsyia RIR3_YEAST : 262- 265: stgsy Iag-T ngtsn RIR3_YEAST : 314- 317: fdfvd Irk-T hgkee RIR3_YEAST : 535- 538: tlnkq Ife-T iyhat RIR3_YEAST : 539- 543: qifet IyhaT leasc RIR3_YEAST : 690- 694: ktvwe IsqkT iinma RIR3_YEAST : 752- 755: aasaa Iqf-T idqev RIR3_YEAST : 854- 857: ynekv Iac-T aptpe T 20: 7.8401 121( 24) G-x(0,1)-T Occurences: 121(24) RIR1_ASFB7 : 184- 185: tmfna G-T kkpql RIR1_ASFB7 : 328- 329: hnrgd G-T wylfs RIR1_ASFB7 : 374- 376: ekryt GvT takei RIR1_ASFB7 : 413- 414: nlshv G-T itnsn RIR1_ASFB7 : 741- 743: lgwkk GlT tgsyy RIR1_ASFB7 : 756- 757: fspga G-T qkkii RIR1_ASFM2 : 185- 186: tmfna G-T kkpql RIR1_ASFM2 : 329- 330: hnrgd G-T wylfs RIR1_ASFM2 : 375- 377: ekryt GvT takei RIR1_ASFM2 : 414- 415: nlshv G-T itnsn RIR1_ASFM2 : 742- 744: lgwkk GlT tgsyy RIR1_ASFM2 : 757- 758: fspga G-T qkkii RIR1_BPT4 : 31- 32: swaae G-T svdpy RIR1_BPT4 : 50- 52: sylrd GmT tddiq RIR1_BPT4 : 406- 407: mters G-T ariyv RIR1_BPT4 : 512- 514: rnlgv GvT nyaaw RIR1_BPT4 : 735- 736: trdgs G-T ddyei RIR1_CAEEL : 56- 58: sglyk GvT tveld RIR1_CAEEL : 215- 216: tlfns G-T crpqm RIR1_CAEEL : 270- 271: gsvia G-T ngtsn RIR1_CAEEL : 273- 274: iagtn G-T sngli RIR1_CAEEL : 427- 428: nqqnl G-T ikcsn RIR1_CAEEL : 578- 580: qfdmw GvT ptdqc RIR1_CAEEL : 725- 727: kpsya GiT smhfy RIR1_EBV : 221- 223: agvgv GvT gagqd RIR1_EBV : 562- 563: whdwa G-T dlsip RIR1_EBV : 816- 818: lletd GfT erace RIR1_ECOLI : 12- 14: vtkrd GsT erinl RIR1_HAEIN : 12- 13: vtkrd G-T qeqin RIR1_HCMVA : 68- 70: keasa GnT nvssg RIR1_HCMVA : 81- 83: vacva GfT sgggv RIR1_HCMVA : 100- 101: spspd G-T psvls RIR1_HCMVA : 133- 135: tfnpa GaT rmeld RIR1_HCMVA : 623- 625: pdvvl GnT rryfd RIR1_HCMVA : 685- 687: almrl GfT yfasw RIR1_HCMVA : 782- 784: vahlw GvT psvwa RIR1_HCMVA : 792- 793: vwasr G-T vfeee RIR1_HCMVA : 878- 880: fyyds GmT pdvll RIR1_HSV11 : 116- 118: gagsd GgT avvaf RIR1_HSV11 : 117- 118: agsdg G-T avvaf RIR1_HSV11 : 124- 126: avvaf GgT prrsa RIR1_HSV11 : 125- 126: vvafg G-T prrsa RIR1_HSV11 : 132- 133: prrsa G-T stgtq RIR1_HSV11 : 136- 137: agtst G-T qtadv RIR1_HSV11 : 219- 221: sdvsg GaT yddal RIR1_HSV11 : 258- 259: ldvcp G-T pgpga RIR1_HSV11 : 307- 308: prprl G-T gtayp RIR1_HSV11 : 309- 310: prlgt G-T aypvp RIR1_HSV11 : 456- 458: valdf GlT erlre RIR1_HSV11 : 573- 574: amlnl G-T rnyyt RIR1_HSV11 : 626- 627: ndsgp G-T asvmp RIR1_HSV11 : 997- 999: kvtrd GeT lrpnt RIR1_HSV11 : 1087- 1088: tekad G-T lpast RIR1_HSV23 : 59- 60: tekad G-T lpast RIR1_HSVEB : 187- 189: vsgev GwT yifka RIR1_HSVEB : 500- 501: smmra G-T yptvk RIR1_HSVEB : 590- 592: fdsyp GvT lanrn RIR1_HSVSA : 581- 582: lmpta G-T sqltg RIR1_HSVSA : 587- 589: tsqlt GyT dsfyp RIR1_HUMAN : 50- 52: qglys GvT tveld RIR1_HUMAN : 209- 210: tlfna G-T nrpql RIR1_HUMAN : 264- 265: gsyia G-T ngnsn RIR1_HUMAN : 401- 402: sqtet G-T pymly RIR1_HUMAN : 421- 422: nqqnl G-T ikcsn RIR1_MOUSE : 50- 52: qglys GvT tveld RIR1_MOUSE : 209- 210: tlfna G-T nrpql RIR1_MOUSE : 264- 265: gsyia G-T ngnsn RIR1_MOUSE : 401- 402: sqtet G-T pymly RIR1_MOUSE : 421- 422: nqqnl G-T ikcsn RIR1_SALTY : 12- 14: vtkrd GrT erinl RIR1_SCHPO : 50- 52: sgvyp GvT tield RIR1_SCHPO : 209- 210: tlfna G-T prpql RIR1_SCHPO : 264- 265: gsyia G-T ngtsn RIR1_SCHPO : 267- 268: iagtn G-T sngiv RIR1_SCHPO : 421- 422: nqknv G-T irssn RIR1_SCHPO : 550- 551: iaqve G-T yesye RIR1_VACCC : 50- 52: qgiyn GvT tveld RIR1_VACCC : 209- 210: tlfna G-T srhqm RIR1_VACCC : 264- 265: gsyis G-T ngisn RIR1_VACCC : 401- 402: sqiet G-T pfily RIR1_VACCC : 421- 422: nqqnl G-T ikcsn RIR1_VACCV : 50- 52: qgiyn GvT tveld RIR1_VACCV : 209- 210: tlfna G-T srhqm RIR1_VACCV : 264- 265: gsyis G-T ngisn RIR1_VACCV : 401- 402: sqiet G-T pfily RIR1_VACCV : 421- 422: nqqnl G-T ikcsn RIR1_VARV : 50- 52: qgiyn GvT tveld RIR1_VARV : 209- 210: tlfna G-T srhqm RIR1_VARV : 264- 265: gsyis G-T ngasn RIR1_VARV : 401- 402: sqiet G-T pfily RIR1_VARV : 421- 422: nqqnl G-T ikcsn RIR1_VZVD : 177- 179: pgind GyT wtdvc RIR1_VZVD : 211- 213: lgret GaT ascyl RIR1_VZVD : 238- 239: itgdv G-T vlqsr RIR1_VZVD : 558- 560: lapfk GfT eskya RIR1_VZVD : 726- 727: eerpd G-T ipask RIR1_YEAST : 50- 52: sgvye GvT tield RIR1_YEAST : 209- 210: tlfna G-T pkpqm RIR1_YEAST : 264- 265: gsyia G-T ngtsn RIR1_YEAST : 267- 268: iagtn G-T sngli RIR1_YEAST : 346- 347: rveen G-T wtlfs RIR1_YEAST : 380- 382: ekegr GkT ikaqk RIR1_YEAST : 400- 401: aqtet G-T pfvvy RIR1_YEAST : 460- 462: etsed GkT stynf RIR3_ECOLI : 14- 16: pftrr GiT lptre RIR3_SALTY : 63- 64: qherl G-T lvreg RIR3_SALTY : 431- 433: dspdi GrT vetai RIR3_SALTY : 440- 442: etair GlT avsdm RIR3_SALTY : 516- 518: larer GkT fagfa RIR3_SALTY : 556- 558: lfars GiT lptre RIR3_SALTY : 614- 616: eirke GkT grvyy RIR3_SALTY : 702- 703: qlale G-T eiegc RIR3_YEAST : 50- 52: sgvys GvT tveld RIR3_YEAST : 209- 210: tlfna G-T phpqm RIR3_YEAST : 264- 265: gsyia G-T ngtsn RIR3_YEAST : 267- 268: iagtn G-T sngli RIR3_YEAST : 380- 382: eregr GkT ikaqk RIR3_YEAST : 400- 401: aqtet G-T pfmvy RIR3_YEAST : 420- 421: nqqnl G-T ikssn RIR3_YEAST : 460- 462: evsed GkT asynf RIR3_YEAST : 783- 784: vyvpk G-T kfseq Number of patterns evaluated by Pratt:155 Total running time: 2 seconds