------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 30 sequences from file PROTEASOME_A PATTERN CONSERVATION: CM: min Nr of Seqs to Match 30 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename PROTEASOME_A.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: PRC2_ARATH 278 PRC2_DROME 279 PRC2_HUMAN 263 PRC2_RAT 263 PRC2_YEAST 234 PRC3_DROME 234 PRC3_HUMAN 233 PRC3_RAT 233 PRC3_XENLA 233 PRC3_YEAST 250 PRC6_ARATH 250 PRC6_DICDI 250 PRC6_DROME 249 PRC6_YEAST 254 PRC8_CAEEL 259 PRC8_HUMAN 254 PRC8_RAT 254 PRC8_YEAST 287 PRC9_DICDI 250 PRC9_DROME 264 PRC9_HUMAN 261 PRC9_RAT 261 PRC9_SCHPO 248 PRC9_YEAST 258 PRCA_THEAC 233 PRCI_HUMAN 246 PRCI_YEAST 252 PRCZ_HUMAN 241 PRCZ_RAT 241 PRCZ_YEAST 260 Pratt run started at Thu Feb 6 20:51:27 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 20.8503 30( 30) S-P-x-G-x(3)-Q-x(2)-Y 2: 16.6802 30( 30) P-x-G-x(3)-Q-x(2)-Y 3: 15.6802 35( 30) S-x(0,2)-G-x(3)-Q-x(2)-Y 4: 12.5102 30( 30) R-P-x-G 5: 12.5102 30( 30) G-x(3)-Q-x(2)-Y 6: 12.0102 44( 30) S-x(0,1)-P-x-G 7: 11.5102 50( 30) G-x(0,1)-R-x(3,4)-V 8: 11.5102 34( 30) S-x(1,2)-G-x(0,1)-R 9: 11.5102 45( 30) T-x(1,2)-S-x(1,2)-G 10: 11.0102 53( 30) A-x(4,5)-L-x(2,4)-E 11: 11.0102 43( 30) G-x(3,5)-E-x(0,1)-A 12: 11.0102 58( 30) T-x(1,3)-S-x(1,2)-G 13: 11.0102 63( 30) G-x(0,2)-R-x(3,4)-V 14: 11.0102 49( 30) T-x(1,2)-S-x(0,2)-G 15: 11.0102 51( 30) T-x(0,2)-S-x(1,2)-G 16: 11.0102 60( 30) V-x(4,5)-K-x(3,5)-L 17: 11.0102 58( 30) G-x(1,2)-A-x(1,3)-G 18: 10.5102 68( 30) L-x(1,3)-A-x(1,3)-A 19: 10.5102 65( 30) A-x(1,3)-A-x(0,2)-K 20: 10.5102 39( 30) S-x(0,2)-G-x(0,2)-R Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 42.4770 30( 30) S-P-[DEQST]-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] B 2: 40.5993 30( 30) S-P-x-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] C 3: 39.7833 30( 30) S-P-[DEQST]-G-x(3)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] D 4: 38.3069 30( 30) P-[DEQST]-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] E 5: 35.4292 35( 30) S-x(0,2)-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] F 6: 32.2592 30( 30) G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] G 7: 25.8378 30( 30) S-x(1,2)-G-x(0,1)-R-x-[FHY]-[GQ]-[ILV]-[ES]-x(4)-[AGS] H 8: 24.8378 30( 30) S-x(0,2)-G-x(0,2)-R-x-[FHY]-[GQ]-[ILV]-[ES]-x(4)-[AGS] I 9: 18.6551 41( 30) T-x(1,2)-S-x(0,2)-G-x(3)-[NPQS]-x-[EG]-x-[ADSV] J 10: 13.6427 46( 30) T-x(1,3)-S-x(1,2)-G-x(4)-[DGV] K 11: 13.2509 48( 30) T-x(0,2)-S-x(1,2)-G-x(4)-[GILV] L 12: 13.2153 35( 30) G-x(3,5)-E-x(0,1)-A-x(2)-[AEGS] M 13: 12.5102 30( 30) R-P-x-G N 14: 12.4308 48( 30) G-x(1,2)-A-x(1,3)-G-x(4)-[ADEGNST] O 15: 11.5102 50( 30) G-x(0,1)-R-x(3,4)-V P 16: 11.5102 45( 30) T-x(1,2)-S-x(1,2)-G Q 17: 11.0102 53( 30) A-x(4,5)-L-x(2,4)-E R 18: 11.0102 63( 30) G-x(0,2)-R-x(3,4)-V S 19: 11.0102 60( 30) V-x(4,5)-K-x(3,5)-L T 20: 10.5102 68( 30) L-x(1,3)-A-x(1,3)-A Best patterns with alignements: fitness hits(seqs) Pattern A 1: 42.4770 30( 30) S-P-[DEQST]-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] Occurences: 30(30) PRC2_ARATH : 14- 37: dvttw SPTGRlfQVEYAmeAvkqGSaaiG lrsrs PRC2_DROME : 14- 37: dvtvw SPQGRlhQVEYAmeAvklGTatvG lknkd PRC2_HUMAN : 14- 37: dvtvw SPQGRihQIEYAmeAvkqGSatvG lkskt PRC2_RAT : 14- 37: dvtvw SPQGRihQIEYAmeAvkqGSatvG lkskt PRC2_YEAST : 14- 37: dtvtf SPTGRlfQVEYAleAikqGSvtvG lrsnt PRC3_DROME : 14- 37: slttf SPSGKlvQLEYAlaAvsgGApsvG iiasn PRC3_HUMAN : 13- 36: slttf SPSGKlvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 13- 36: slttf SPSGKlvQIEYAlaAvagGApsvG ikaan PRC3_XENLA : 13- 36: slttf SPSGKlvQIEYAlaAvaaGApsvG ikatn PRC3_YEAST : 13- 36: slttf SPSGKlgQIDYAltAvkqGVtslG ikatn PRC6_ARATH : 12- 35: aitvf SPDGHlfQVEYAleAvrkGNaavG vrgtd PRC6_DICDI : 14- 37: aitvf SPDGHlfQVEYAmeAvrkGTvavG vrgkd PRC6_DROME : 13- 36: avtif SPDGHllQVEYAqeAvrkGStavG vrgan PRC6_YEAST : 12- 35: alsif SPDGHifQVEYAleAvkrGTcavG vkgkn PRC8_CAEEL : 15- 38: aastf SPDGRifQVEYAqkAvdnAGtmiA irgkn PRC8_HUMAN : 15- 38: sastf SPDGRvfQVEYAmkAvenSStaiG irckd PRC8_RAT : 15- 38: sastf SPDGRvfQVEYAmkAvenSStaiG irckd PRC8_YEAST : 15- 38: snsvf SPDGRnfQVEYAvkAvenGTtsiG ikcnd PRC9_DICDI : 13- 36: rttif SPEGRvyQVEYAmtAirhAGatvG ilakd PRC9_DROME : 13- 36: rttif SPEGRlyQVEYAmeAishAGtclG ilaed PRC9_HUMAN : 13- 36: rttif SPEGRlyQVEYAmeAighAGtclG iland PRC9_RAT : 13- 36: rttif SPEGRlyQVEYAmeAighAGtclG iland PRC9_SCHPO : 13- 36: rttif SPEGRlyQVEYAleAinhAGvalG ivakd PRC9_YEAST : 14- 37: rttif SPEGRlyQVEYAleSishAGtaiG imasd PRCA_THEAC : 16- 39: aitvf SPDGRlfQVEYAreAvkkGStalG mkfan PRCI_HUMAN : 17- 40: hitif SPEGRlyQVEYAfkAinqGGltsV avrgk PRCI_YEAST : 20- 43: hitif SPEGRlyQVEYAfkAtnqTNinsL avrgk PRCZ_HUMAN : 16- 39: gvntf SPEGRlfQVEYDieAiklGStaiG iqtse PRCZ_RAT : 16- 39: gvntf SPEGRlfQVEYAieGhklGStaiG iqtse PRCZ_YEAST : 16- 39: gvstf SPEGRlfQVEYSleAiklGStaiG iatke B 2: 40.5993 30( 30) S-P-x-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] Occurences: 30(30) PRC2_ARATH : 14- 37: dvttw SPtGRlfQVEYAmeAvkqGSaaiG lrsrs PRC2_DROME : 14- 37: dvtvw SPqGRlhQVEYAmeAvklGTatvG lknkd PRC2_HUMAN : 14- 37: dvtvw SPqGRihQIEYAmeAvkqGSatvG lkskt PRC2_RAT : 14- 37: dvtvw SPqGRihQIEYAmeAvkqGSatvG lkskt PRC2_YEAST : 14- 37: dtvtf SPtGRlfQVEYAleAikqGSvtvG lrsnt PRC3_DROME : 14- 37: slttf SPsGKlvQLEYAlaAvsgGApsvG iiasn PRC3_HUMAN : 13- 36: slttf SPsGKlvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 13- 36: slttf SPsGKlvQIEYAlaAvagGApsvG ikaan PRC3_XENLA : 13- 36: slttf SPsGKlvQIEYAlaAvaaGApsvG ikatn PRC3_YEAST : 13- 36: slttf SPsGKlgQIDYAltAvkqGVtslG ikatn PRC6_ARATH : 12- 35: aitvf SPdGHlfQVEYAleAvrkGNaavG vrgtd PRC6_DICDI : 14- 37: aitvf SPdGHlfQVEYAmeAvrkGTvavG vrgkd PRC6_DROME : 13- 36: avtif SPdGHllQVEYAqeAvrkGStavG vrgan PRC6_YEAST : 12- 35: alsif SPdGHifQVEYAleAvkrGTcavG vkgkn PRC8_CAEEL : 15- 38: aastf SPdGRifQVEYAqkAvdnAGtmiA irgkn PRC8_HUMAN : 15- 38: sastf SPdGRvfQVEYAmkAvenSStaiG irckd PRC8_RAT : 15- 38: sastf SPdGRvfQVEYAmkAvenSStaiG irckd PRC8_YEAST : 15- 38: snsvf SPdGRnfQVEYAvkAvenGTtsiG ikcnd PRC9_DICDI : 13- 36: rttif SPeGRvyQVEYAmtAirhAGatvG ilakd PRC9_DROME : 13- 36: rttif SPeGRlyQVEYAmeAishAGtclG ilaed PRC9_HUMAN : 13- 36: rttif SPeGRlyQVEYAmeAighAGtclG iland PRC9_RAT : 13- 36: rttif SPeGRlyQVEYAmeAighAGtclG iland PRC9_SCHPO : 13- 36: rttif SPeGRlyQVEYAleAinhAGvalG ivakd PRC9_YEAST : 14- 37: rttif SPeGRlyQVEYAleSishAGtaiG imasd PRCA_THEAC : 16- 39: aitvf SPdGRlfQVEYAreAvkkGStalG mkfan PRCI_HUMAN : 17- 40: hitif SPeGRlyQVEYAfkAinqGGltsV avrgk PRCI_YEAST : 20- 43: hitif SPeGRlyQVEYAfkAtnqTNinsL avrgk PRCZ_HUMAN : 16- 39: gvntf SPeGRlfQVEYDieAiklGStaiG iqtse PRCZ_RAT : 16- 39: gvntf SPeGRlfQVEYAieGhklGStaiG iqtse PRCZ_YEAST : 16- 39: gvstf SPeGRlfQVEYSleAiklGStaiG iatke C 3: 39.7833 30( 30) S-P-[DEQST]-G-x(3)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] Occurences: 30(30) PRC2_ARATH : 14- 37: dvttw SPTGrlfQVEYAmeAvkqGSaaiG lrsrs PRC2_DROME : 14- 37: dvtvw SPQGrlhQVEYAmeAvklGTatvG lknkd PRC2_HUMAN : 14- 37: dvtvw SPQGrihQIEYAmeAvkqGSatvG lkskt PRC2_RAT : 14- 37: dvtvw SPQGrihQIEYAmeAvkqGSatvG lkskt PRC2_YEAST : 14- 37: dtvtf SPTGrlfQVEYAleAikqGSvtvG lrsnt PRC3_DROME : 14- 37: slttf SPSGklvQLEYAlaAvsgGApsvG iiasn PRC3_HUMAN : 13- 36: slttf SPSGklvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 13- 36: slttf SPSGklvQIEYAlaAvagGApsvG ikaan PRC3_XENLA : 13- 36: slttf SPSGklvQIEYAlaAvaaGApsvG ikatn PRC3_YEAST : 13- 36: slttf SPSGklgQIDYAltAvkqGVtslG ikatn PRC6_ARATH : 12- 35: aitvf SPDGhlfQVEYAleAvrkGNaavG vrgtd PRC6_DICDI : 14- 37: aitvf SPDGhlfQVEYAmeAvrkGTvavG vrgkd PRC6_DROME : 13- 36: avtif SPDGhllQVEYAqeAvrkGStavG vrgan PRC6_YEAST : 12- 35: alsif SPDGhifQVEYAleAvkrGTcavG vkgkn PRC8_CAEEL : 15- 38: aastf SPDGrifQVEYAqkAvdnAGtmiA irgkn PRC8_HUMAN : 15- 38: sastf SPDGrvfQVEYAmkAvenSStaiG irckd PRC8_RAT : 15- 38: sastf SPDGrvfQVEYAmkAvenSStaiG irckd PRC8_YEAST : 15- 38: snsvf SPDGrnfQVEYAvkAvenGTtsiG ikcnd PRC9_DICDI : 13- 36: rttif SPEGrvyQVEYAmtAirhAGatvG ilakd PRC9_DROME : 13- 36: rttif SPEGrlyQVEYAmeAishAGtclG ilaed PRC9_HUMAN : 13- 36: rttif SPEGrlyQVEYAmeAighAGtclG iland PRC9_RAT : 13- 36: rttif SPEGrlyQVEYAmeAighAGtclG iland PRC9_SCHPO : 13- 36: rttif SPEGrlyQVEYAleAinhAGvalG ivakd PRC9_YEAST : 14- 37: rttif SPEGrlyQVEYAleSishAGtaiG imasd PRCA_THEAC : 16- 39: aitvf SPDGrlfQVEYAreAvkkGStalG mkfan PRCI_HUMAN : 17- 40: hitif SPEGrlyQVEYAfkAinqGGltsV avrgk PRCI_YEAST : 20- 43: hitif SPEGrlyQVEYAfkAtnqTNinsL avrgk PRCZ_HUMAN : 16- 39: gvntf SPEGrlfQVEYDieAiklGStaiG iqtse PRCZ_RAT : 16- 39: gvntf SPEGrlfQVEYAieGhklGStaiG iqtse PRCZ_YEAST : 16- 39: gvstf SPEGrlfQVEYSleAiklGStaiG iatke D 4: 38.3069 30( 30) P-[DEQST]-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] Occurences: 30(30) PRC2_ARATH : 15- 37: vttws PTGRlfQVEYAmeAvkqGSaaiG lrsrs PRC2_DROME : 15- 37: vtvws PQGRlhQVEYAmeAvklGTatvG lknkd PRC2_HUMAN : 15- 37: vtvws PQGRihQIEYAmeAvkqGSatvG lkskt PRC2_RAT : 15- 37: vtvws PQGRihQIEYAmeAvkqGSatvG lkskt PRC2_YEAST : 15- 37: tvtfs PTGRlfQVEYAleAikqGSvtvG lrsnt PRC3_DROME : 15- 37: lttfs PSGKlvQLEYAlaAvsgGApsvG iiasn PRC3_HUMAN : 14- 36: lttfs PSGKlvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 14- 36: lttfs PSGKlvQIEYAlaAvagGApsvG ikaan PRC3_XENLA : 14- 36: lttfs PSGKlvQIEYAlaAvaaGApsvG ikatn PRC3_YEAST : 14- 36: lttfs PSGKlgQIDYAltAvkqGVtslG ikatn PRC6_ARATH : 13- 35: itvfs PDGHlfQVEYAleAvrkGNaavG vrgtd PRC6_DICDI : 15- 37: itvfs PDGHlfQVEYAmeAvrkGTvavG vrgkd PRC6_DROME : 14- 36: vtifs PDGHllQVEYAqeAvrkGStavG vrgan PRC6_YEAST : 13- 35: lsifs PDGHifQVEYAleAvkrGTcavG vkgkn PRC8_CAEEL : 16- 38: astfs PDGRifQVEYAqkAvdnAGtmiA irgkn PRC8_HUMAN : 16- 38: astfs PDGRvfQVEYAmkAvenSStaiG irckd PRC8_RAT : 16- 38: astfs PDGRvfQVEYAmkAvenSStaiG irckd PRC8_YEAST : 16- 38: nsvfs PDGRnfQVEYAvkAvenGTtsiG ikcnd PRC9_DICDI : 14- 36: ttifs PEGRvyQVEYAmtAirhAGatvG ilakd PRC9_DROME : 14- 36: ttifs PEGRlyQVEYAmeAishAGtclG ilaed PRC9_HUMAN : 14- 36: ttifs PEGRlyQVEYAmeAighAGtclG iland PRC9_RAT : 14- 36: ttifs PEGRlyQVEYAmeAighAGtclG iland PRC9_SCHPO : 14- 36: ttifs PEGRlyQVEYAleAinhAGvalG ivakd PRC9_YEAST : 15- 37: ttifs PEGRlyQVEYAleSishAGtaiG imasd PRCA_THEAC : 17- 39: itvfs PDGRlfQVEYAreAvkkGStalG mkfan PRCI_HUMAN : 18- 40: itifs PEGRlyQVEYAfkAinqGGltsV avrgk PRCI_YEAST : 21- 43: itifs PEGRlyQVEYAfkAtnqTNinsL avrgk PRCZ_HUMAN : 17- 39: vntfs PEGRlfQVEYDieAiklGStaiG iqtse PRCZ_RAT : 17- 39: vntfs PEGRlfQVEYAieGhklGStaiG iqtse PRCZ_YEAST : 17- 39: vstfs PEGRlfQVEYSleAiklGStaiG iatke E 5: 35.4292 35( 30) S-x(0,2)-G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] Occurences: 35(30) PRC2_ARATH : 14- 37: dvttw SptGRlfQVEYAmeAvkqGSaaiG lrsrs PRC2_DROME : 14- 37: dvtvw SpqGRlhQVEYAmeAvklGTatvG lknkd PRC2_HUMAN : 14- 37: dvtvw SpqGRihQIEYAmeAvkqGSatvG lkskt PRC2_RAT : 14- 37: dvtvw SpqGRihQIEYAmeAvkqGSatvG lkskt PRC2_YEAST : 14- 37: dtvtf SptGRlfQVEYAleAikqGSvtvG lrsnt PRC3_DROME : 14- 37: slttf SpsGKlvQLEYAlaAvsgGApsvG iiasn PRC3_DROME : 16- 37: ttfsp S--GKlvQLEYAlaAvsgGApsvG iiasn PRC3_HUMAN : 13- 36: slttf SpsGKlvQIEYAlaAvagGApsvG ikaan PRC3_HUMAN : 15- 36: ttfsp S--GKlvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 13- 36: slttf SpsGKlvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 15- 36: ttfsp S--GKlvQIEYAlaAvagGApsvG ikaan PRC3_XENLA : 13- 36: slttf SpsGKlvQIEYAlaAvaaGApsvG ikatn PRC3_XENLA : 15- 36: ttfsp S--GKlvQIEYAlaAvaaGApsvG ikatn PRC3_YEAST : 13- 36: slttf SpsGKlgQIDYAltAvkqGVtslG ikatn PRC3_YEAST : 15- 36: ttfsp S--GKlgQIDYAltAvkqGVtslG ikatn PRC6_ARATH : 12- 35: aitvf SpdGHlfQVEYAleAvrkGNaavG vrgtd PRC6_DICDI : 14- 37: aitvf SpdGHlfQVEYAmeAvrkGTvavG vrgkd PRC6_DROME : 13- 36: avtif SpdGHllQVEYAqeAvrkGStavG vrgan PRC6_YEAST : 12- 35: alsif SpdGHifQVEYAleAvkrGTcavG vkgkn PRC8_CAEEL : 15- 38: aastf SpdGRifQVEYAqkAvdnAGtmiA irgkn PRC8_HUMAN : 15- 38: sastf SpdGRvfQVEYAmkAvenSStaiG irckd PRC8_RAT : 15- 38: sastf SpdGRvfQVEYAmkAvenSStaiG irckd PRC8_YEAST : 15- 38: snsvf SpdGRnfQVEYAvkAvenGTtsiG ikcnd PRC9_DICDI : 13- 36: rttif SpeGRvyQVEYAmtAirhAGatvG ilakd PRC9_DROME : 13- 36: rttif SpeGRlyQVEYAmeAishAGtclG ilaed PRC9_HUMAN : 13- 36: rttif SpeGRlyQVEYAmeAighAGtclG iland PRC9_RAT : 13- 36: rttif SpeGRlyQVEYAmeAighAGtclG iland PRC9_SCHPO : 13- 36: rttif SpeGRlyQVEYAleAinhAGvalG ivakd PRC9_YEAST : 14- 37: rttif SpeGRlyQVEYAleSishAGtaiG imasd PRCA_THEAC : 16- 39: aitvf SpdGRlfQVEYAreAvkkGStalG mkfan PRCI_HUMAN : 17- 40: hitif SpeGRlyQVEYAfkAinqGGltsV avrgk PRCI_YEAST : 20- 43: hitif SpeGRlyQVEYAfkAtnqTNinsL avrgk PRCZ_HUMAN : 16- 39: gvntf SpeGRlfQVEYDieAiklGStaiG iqtse PRCZ_RAT : 16- 39: gvntf SpeGRlfQVEYAieGhklGStaiG iqtse PRCZ_YEAST : 16- 39: gvstf SpeGRlfQVEYSleAiklGStaiG iatke F 6: 32.2592 30( 30) G-[HKR]-x(2)-Q-[ILV]-[DE]-Y-[ADS]-x(2)-[AGS]-x(3)-[AGST]-[AGNSTV]-x(3)-[AGLV] Occurences: 30(30) PRC2_ARATH : 17- 37: twspt GRlfQVEYAmeAvkqGSaaiG lrsrs PRC2_DROME : 17- 37: vwspq GRlhQVEYAmeAvklGTatvG lknkd PRC2_HUMAN : 17- 37: vwspq GRihQIEYAmeAvkqGSatvG lkskt PRC2_RAT : 17- 37: vwspq GRihQIEYAmeAvkqGSatvG lkskt PRC2_YEAST : 17- 37: tfspt GRlfQVEYAleAikqGSvtvG lrsnt PRC3_DROME : 17- 37: tfsps GKlvQLEYAlaAvsgGApsvG iiasn PRC3_HUMAN : 16- 36: tfsps GKlvQIEYAlaAvagGApsvG ikaan PRC3_RAT : 16- 36: tfsps GKlvQIEYAlaAvagGApsvG ikaan PRC3_XENLA : 16- 36: tfsps GKlvQIEYAlaAvaaGApsvG ikatn PRC3_YEAST : 16- 36: tfsps GKlgQIDYAltAvkqGVtslG ikatn PRC6_ARATH : 15- 35: vfspd GHlfQVEYAleAvrkGNaavG vrgtd PRC6_DICDI : 17- 37: vfspd GHlfQVEYAmeAvrkGTvavG vrgkd PRC6_DROME : 16- 36: ifspd GHllQVEYAqeAvrkGStavG vrgan PRC6_YEAST : 15- 35: ifspd GHifQVEYAleAvkrGTcavG vkgkn PRC8_CAEEL : 18- 38: tfspd GRifQVEYAqkAvdnAGtmiA irgkn PRC8_HUMAN : 18- 38: tfspd GRvfQVEYAmkAvenSStaiG irckd PRC8_RAT : 18- 38: tfspd GRvfQVEYAmkAvenSStaiG irckd PRC8_YEAST : 18- 38: vfspd GRnfQVEYAvkAvenGTtsiG ikcnd PRC9_DICDI : 16- 36: ifspe GRvyQVEYAmtAirhAGatvG ilakd PRC9_DROME : 16- 36: ifspe GRlyQVEYAmeAishAGtclG ilaed PRC9_HUMAN : 16- 36: ifspe GRlyQVEYAmeAighAGtclG iland PRC9_RAT : 16- 36: ifspe GRlyQVEYAmeAighAGtclG iland PRC9_SCHPO : 16- 36: ifspe GRlyQVEYAleAinhAGvalG ivakd PRC9_YEAST : 17- 37: ifspe GRlyQVEYAleSishAGtaiG imasd PRCA_THEAC : 19- 39: vfspd GRlfQVEYAreAvkkGStalG mkfan PRCI_HUMAN : 20- 40: ifspe GRlyQVEYAfkAinqGGltsV avrgk PRCI_YEAST : 23- 43: ifspe GRlyQVEYAfkAtnqTNinsL avrgk PRCZ_HUMAN : 19- 39: tfspe GRlfQVEYDieAiklGStaiG iqtse PRCZ_RAT : 19- 39: tfspe GRlfQVEYAieGhklGStaiG iqtse PRCZ_YEAST : 19- 39: tfspe GRlfQVEYSleAiklGStaiG iatke G 7: 25.8378 30( 30) S-x(1,2)-G-x(0,1)-R-x-[FHY]-[GQ]-[ILV]-[ES]-x(4)-[AGS] Occurences: 30(30) PRC2_ARATH : 14- 28: dvttw SptG-RlFQVEyameA vkqgs PRC2_DROME : 14- 28: dvtvw SpqG-RlHQVEyameA vklgt PRC2_HUMAN : 14- 28: dvtvw SpqG-RiHQIEyameA vkqgs PRC2_RAT : 14- 28: dvtvw SpqG-RiHQIEyameA vkqgs PRC2_YEAST : 14- 28: dtvtf SptG-RlFQVEyaleA ikqgs PRC3_DROME : 124- 138: qeytq Sg-GvRpFGVSllicG wdndr PRC3_HUMAN : 123- 137: qeytq Sg-GvRpFGVSllicG wnegr PRC3_RAT : 123- 137: qeytq Sg-GvRpFGVSllicG wnegr PRC3_XENLA : 123- 137: qeytq Sg-GvRpFGVSlliaG wdegr PRC3_YEAST : 124- 138: qeatq Sg-GvRpFGVSlliaG hdefn PRC6_ARATH : 122- 136: qkytq Sg-GvRpFGLStlivG fdpyt PRC6_DICDI : 124- 138: qrytq Sg-GvRpFGIStlivG fdtdg PRC6_DROME : 123- 137: qkytq Sn-GrRpFGIScligG fdadg PRC6_YEAST : 123- 137: qrytq Sg-GvRpFGVStliaG fdprd PRC8_CAEEL : 15- 29: aastf SpdG-RiFQVEyaqkA vdnag PRC8_HUMAN : 15- 29: sastf SpdG-RvFQVEyamkA venss PRC8_RAT : 15- 29: sastf SpdG-RvFQVEyamkA venss PRC8_YEAST : 15- 29: snsvf SpdG-RnFQVEyavkA vengt PRC9_DICDI : 13- 27: rttif SpeG-RvYQVEyamtA irhag PRC9_DROME : 13- 27: rttif SpeG-RlYQVEyameA ishag PRC9_HUMAN : 13- 27: rttif SpeG-RlYQVEyameA ighag PRC9_RAT : 13- 27: rttif SpeG-RlYQVEyameA ighag PRC9_SCHPO : 13- 27: rttif SpeG-RlYQVEyaleA inhag PRC9_YEAST : 14- 28: rttif SpeG-RlYQVEyaleS ishag PRCA_THEAC : 16- 30: aitvf SpdG-RlFQVEyareA vkkgs PRCI_HUMAN : 17- 31: hitif SpeG-RlYQVEyafkA inqgg PRCI_YEAST : 20- 34: hitif SpeG-RlYQVEyafkA tnqtn PRCZ_HUMAN : 16- 30: gvntf SpeG-RlFQVEydieA iklgs PRCZ_RAT : 16- 30: gvntf SpeG-RlFQVEyaieG hklgs PRCZ_YEAST : 16- 30: gvstf SpeG-RlFQVEysleA iklgs H 8: 24.8378 30( 30) S-x(0,2)-G-x(0,2)-R-x-[FHY]-[GQ]-[ILV]-[ES]-x(4)-[AGS] Occurences: 30(30) PRC2_ARATH : 14- 28: dvttw SptG--RlFQVEyameA vkqgs PRC2_DROME : 14- 28: dvtvw SpqG--RlHQVEyameA vklgt PRC2_HUMAN : 14- 28: dvtvw SpqG--RiHQIEyameA vkqgs PRC2_RAT : 14- 28: dvtvw SpqG--RiHQIEyameA vkqgs PRC2_YEAST : 14- 28: dtvtf SptG--RlFQVEyaleA ikqgs PRC3_DROME : 124- 138: qeytq Sg-Gv-RpFGVSllicG wdndr PRC3_DROME : 124- 138: qeytq S--GgvRpFGVSllicG wdndr PRC3_HUMAN : 123- 137: qeytq Sg-Gv-RpFGVSllicG wnegr PRC3_HUMAN : 123- 137: qeytq S--GgvRpFGVSllicG wnegr PRC3_RAT : 123- 137: qeytq Sg-Gv-RpFGVSllicG wnegr PRC3_RAT : 123- 137: qeytq S--GgvRpFGVSllicG wnegr PRC3_XENLA : 123- 137: qeytq Sg-Gv-RpFGVSlliaG wdegr PRC3_XENLA : 123- 137: qeytq S--GgvRpFGVSlliaG wdegr PRC3_YEAST : 124- 138: qeatq Sg-Gv-RpFGVSlliaG hdefn PRC3_YEAST : 124- 138: qeatq S--GgvRpFGVSlliaG hdefn PRC6_ARATH : 122- 136: qkytq Sg-Gv-RpFGLStlivG fdpyt PRC6_ARATH : 122- 136: qkytq S--GgvRpFGLStlivG fdpyt PRC6_DICDI : 124- 138: qrytq Sg-Gv-RpFGIStlivG fdtdg PRC6_DICDI : 124- 138: qrytq S--GgvRpFGIStlivG fdtdg PRC6_DROME : 123- 137: qkytq Sn-Gr-RpFGIScligG fdadg PRC6_YEAST : 123- 137: qrytq Sg-Gv-RpFGVStliaG fdprd PRC6_YEAST : 123- 137: qrytq S--GgvRpFGVStliaG fdprd PRC8_CAEEL : 15- 29: aastf SpdG--RiFQVEyaqkA vdnag PRC8_HUMAN : 15- 29: sastf SpdG--RvFQVEyamkA venss PRC8_RAT : 15- 29: sastf SpdG--RvFQVEyamkA venss PRC8_YEAST : 15- 29: snsvf SpdG--RnFQVEyavkA vengt PRC9_DICDI : 13- 27: rttif SpeG--RvYQVEyamtA irhag PRC9_DROME : 13- 27: rttif SpeG--RlYQVEyameA ishag PRC9_HUMAN : 13- 27: rttif SpeG--RlYQVEyameA ighag PRC9_RAT : 13- 27: rttif SpeG--RlYQVEyameA ighag PRC9_SCHPO : 13- 27: rttif SpeG--RlYQVEyaleA inhag PRC9_YEAST : 14- 28: rttif SpeG--RlYQVEyaleS ishag PRCA_THEAC : 16- 30: aitvf SpdG--RlFQVEyareA vkkgs PRCI_HUMAN : 17- 31: hitif SpeG--RlYQVEyafkA inqgg PRCI_YEAST : 20- 34: hitif SpeG--RlYQVEyafkA tnqtn PRCZ_HUMAN : 16- 30: gvntf SpeG--RlFQVEydieA iklgs PRCZ_RAT : 16- 30: gvntf SpeG--RlFQVEyaieG hklgs PRCZ_YEAST : 16- 30: gvstf SpeG--RlFQVEysleA iklgs I 9: 18.6551 41( 30) T-x(1,2)-S-x(0,2)-G-x(3)-[NPQS]-x-[EG]-x-[ADSV] Occurences: 41(30) PRC2_ARATH : 11- 25: ydtdv TtwSptGrlfQvEyA meavk PRC2_ARATH : 12- 25: dtdvt Tw-SptGrlfQvEyA meavk PRC2_DROME : 11- 25: ydsdv TvwSpqGrlhQvEyA meavk PRC2_HUMAN : 11- 25: ydndv TvwSpqGrihQiEyA meavk PRC2_RAT : 11- 25: ydndv TvwSpqGrihQiEyA meavk PRC2_YEAST : 12- 25: dgdtv Tf-SptGrlfQvEyA leaik PRC3_DROME : 11- 25: ysfsl TtfSpsGklvQlEyA laavs PRC3_DROME : 12- 25: sfslt Tf-SpsGklvQlEyA laavs PRC3_DROME : 122- 133: lmqey Tq-S--GgvrPfGvS llicg PRC3_HUMAN : 10- 24: ysfsl TtfSpsGklvQiEyA laava PRC3_HUMAN : 11- 24: sfslt Tf-SpsGklvQiEyA laava PRC3_HUMAN : 121- 132: vmqey Tq-S--GgvrPfGvS llicg PRC3_RAT : 10- 24: ysfsl TtfSpsGklvQiEyA laava PRC3_RAT : 11- 24: sfslt Tf-SpsGklvQiEyA laava PRC3_RAT : 121- 132: vmqey Tq-S--GgvrPfGvS llicg PRC3_XENLA : 10- 24: ysfsl TtfSpsGklvQiEyA laava PRC3_XENLA : 11- 24: sfslt Tf-SpsGklvQiEyA laava PRC3_XENLA : 121- 132: vmqey Tq-S--GgvrPfGvS lliag PRC3_YEAST : 122- 133: imqea Tq-S--GgvrPfGvS lliag PRC6_ARATH : 9- 23: ydrai TvfSpdGhlfQvEyA leavr PRC6_ARATH : 120- 131: lqqky Tq-S--GgvrPfGlS tlivg PRC6_DICDI : 11- 25: ydrai TvfSpdGhlfQvEyA meavr PRC6_DICDI : 122- 133: iqqry Tq-S--GgvrPfGiS tlivg PRC6_DROME : 10- 24: ydrav TifSpdGhllQvEyA qeavr PRC6_YEAST : 121- 132: vqqry Tq-S--GgvrPfGvS tliag PRC8_CAEEL : 13- 26: dlaas Tf-SpdGrifQvEyA qkavd PRC8_HUMAN : 13- 26: dlsas Tf-SpdGrvfQvEyA mkave PRC8_RAT : 13- 26: dlsas Tf-SpdGrvfQvEyA mkave PRC8_YEAST : 34- 46: aveng Tt-Si-GikcNdGvV favek PRC9_DICDI : 10- 24: ydqrt TifSpeGrvyQvEyA mtair PRC9_DROME : 10- 24: ydsrt TifSpeGrlyQvEyA meais PRC9_HUMAN : 10- 24: ydsrt TifSpeGrlyQvEyA meaig PRC9_RAT : 10- 24: ydsrt TifSpeGrlyQvEyA meaig PRC9_SCHPO : 10- 24: ydsrt TifSpeGrlyQvEyA leain PRC9_YEAST : 11- 25: ydsrt TifSpeGrlyQvEyA lesis PRCA_THEAC : 13- 27: ydrai TvfSpdGrlfQvEyA reavk PRCI_HUMAN : 14- 28: fdrhi TifSpeGrlyQvEyA fkain PRCI_YEAST : 17- 31: ydrhi TifSpeGrlyQvEyA fkatn PRCZ_HUMAN : 14- 27: drgvn Tf-SpeGrlfQvEyD ieaik PRCZ_RAT : 14- 27: drgvn Tf-SpeGrlfQvEyA ieghk PRCZ_YEAST : 14- 27: drgvs Tf-SpeGrlfQvEyS leaik J 10: 13.6427 46( 30) T-x(1,3)-S-x(1,2)-G-x(4)-[DGV] Occurences: 46(30) PRC2_ARATH : 11- 22: ydtdv Ttw-SptGrlfqV eyame PRC2_ARATH : 12- 22: dtdvt Tw--SptGrlfqV eyame PRC2_DROME : 11- 22: ydsdv Tvw-SpqGrlhqV eyame PRC2_HUMAN : 207- 218: eqdlt TknvSi-GivgkD lefti PRC2_RAT : 207- 218: eqdlt TknvSi-GivgkD lefti PRC2_YEAST : 10- 22: nydgd TvtfSptGrlfqV eyale PRC2_YEAST : 12- 22: dgdtv Tf--SptGrlfqV eyale PRC2_YEAST : 120- 129: kaqkn Tq--Sy-GgrpyG vglli PRC2_YEAST : 120- 130: kaqkn Tq--SygGrpygV gllii PRC3_DROME : 122- 131: lmqey Tq--Sg-GvrpfG vslli PRC3_HUMAN : 121- 130: vmqey Tq--Sg-GvrpfG vslli PRC3_HUMAN : 193- 205: htail TlkeSfeGqmteD nievg PRC3_RAT : 121- 130: vmqey Tq--Sg-GvrpfG vslli PRC3_RAT : 193- 205: htail TlkeSfeGqmteD nievg PRC3_XENLA : 121- 130: vmqey Tq--Sg-GvrpfG vslli PRC3_XENLA : 193- 205: htail TlkeSfeGqmteD nievg PRC3_YEAST : 122- 131: imqea Tq--Sg-GvrpfG vslli PRC3_YEAST : 195- 207: hiall TlkeSveGefngD tiela PRC6_ARATH : 9- 20: ydrai Tvf-SpdGhlfqV eyale PRC6_ARATH : 120- 129: lqqky Tq--Sg-GvrpfG lstli PRC6_DICDI : 11- 22: ydrai Tvf-SpdGhlfqV eyame PRC6_DICDI : 122- 131: iqqry Tq--Sg-GvrpfG istli PRC6_DROME : 10- 21: ydrav Tif-SpdGhllqV eyaqe PRC6_DROME : 121- 130: lkqky Tq--Sn-GrrpfG iscli PRC6_YEAST : 121- 130: vqqry Tq--Sg-GvrpfG vstli PRC8_CAEEL : 13- 23: dlaas Tf--SpdGrifqV eyaqk PRC8_HUMAN : 13- 23: dlsas Tf--SpdGrvfqV eyamk PRC8_RAT : 13- 23: dlsas Tf--SpdGrvfqV eyamk PRC8_YEAST : 34- 43: aveng Tt--Si-GikcnD gvvfa PRC9_DICDI : 9- 21: rydqr TtifSpeGrvyqV eyamt PRC9_DICDI : 10- 21: ydqrt Tif-SpeGrvyqV eyamt PRC9_DROME : 9- 21: rydsr TtifSpeGrlyqV eyame PRC9_DROME : 10- 21: ydsrt Tif-SpeGrlyqV eyame PRC9_HUMAN : 9- 21: rydsr TtifSpeGrlyqV eyame PRC9_HUMAN : 10- 21: ydsrt Tif-SpeGrlyqV eyame PRC9_RAT : 9- 21: rydsr TtifSpeGrlyqV eyame PRC9_RAT : 10- 21: ydsrt Tif-SpeGrlyqV eyame PRC9_SCHPO : 9- 21: sydsr TtifSpeGrlyqV eyale PRC9_SCHPO : 10- 21: ydsrt Tif-SpeGrlyqV eyale PRC9_YEAST : 10- 22: rydsr TtifSpeGrlyqV eyale PRC9_YEAST : 11- 22: ydsrt Tif-SpeGrlyqV eyale PRCA_THEAC : 13- 24: ydrai Tvf-SpdGrlfqV eyare PRCI_HUMAN : 14- 25: fdrhi Tif-SpeGrlyqV eyafk PRCI_YEAST : 17- 28: ydrhi Tif-SpeGrlyqV eyafk PRCZ_HUMAN : 14- 24: drgvn Tf--SpeGrlfqV eydie PRCZ_RAT : 14- 24: drgvn Tf--SpeGrlfqV eyaie PRCZ_YEAST : 14- 24: drgvs Tf--SpeGrlfqV eysle K 11: 13.2509 48( 30) T-x(0,2)-S-x(1,2)-G-x(4)-[GILV] Occurences: 48(30) PRC2_ARATH : 11- 22: ydtdv TtwSptGrlfqV eyame PRC2_ARATH : 12- 22: dtdvt Tw-SptGrlfqV eyame PRC2_DROME : 11- 22: ydsdv TvwSpqGrlhqV eyame PRC2_HUMAN : 11- 22: ydndv TvwSpqGrihqI eyame PRC2_RAT : 11- 22: ydndv TvwSpqGrihqI eyame PRC2_YEAST : 12- 22: dgdtv Tf-SptGrlfqV eyale PRC2_YEAST : 120- 129: kaqkn Tq-Sy-GgrpyG vglli PRC2_YEAST : 120- 130: kaqkn Tq-SygGrpygV gllii PRC3_DROME : 11- 22: ysfsl TtfSpsGklvqL eyala PRC3_DROME : 12- 22: sfslt Tf-SpsGklvqL eyala PRC3_DROME : 122- 131: lmqey Tq-Sg-GvrpfG vslli PRC3_HUMAN : 10- 21: ysfsl TtfSpsGklvqI eyala PRC3_HUMAN : 11- 21: sfslt Tf-SpsGklvqI eyala PRC3_HUMAN : 121- 130: vmqey Tq-Sg-GvrpfG vslli PRC3_RAT : 10- 21: ysfsl TtfSpsGklvqI eyala PRC3_RAT : 11- 21: sfslt Tf-SpsGklvqI eyala PRC3_RAT : 121- 130: vmqey Tq-Sg-GvrpfG vslli PRC3_XENLA : 10- 21: ysfsl TtfSpsGklvqI eyala PRC3_XENLA : 11- 21: sfslt Tf-SpsGklvqI eyala PRC3_XENLA : 121- 130: vmqey Tq-Sg-GvrpfG vslli PRC3_YEAST : 10- 21: ysfsl TtfSpsGklgqI dyalt PRC3_YEAST : 11- 21: sfslt Tf-SpsGklgqI dyalt PRC3_YEAST : 122- 131: imqea Tq-Sg-GvrpfG vslli PRC6_ARATH : 9- 20: ydrai TvfSpdGhlfqV eyale PRC6_ARATH : 120- 129: lqqky Tq-Sg-GvrpfG lstli PRC6_DICDI : 11- 22: ydrai TvfSpdGhlfqV eyame PRC6_DICDI : 122- 131: iqqry Tq-Sg-GvrpfG istli PRC6_DROME : 10- 21: ydrav TifSpdGhllqV eyaqe PRC6_DROME : 121- 130: lkqky Tq-Sn-GrrpfG iscli PRC6_YEAST : 121- 130: vqqry Tq-Sg-GvrpfG vstli PRC8_CAEEL : 13- 23: dlaas Tf-SpdGrifqV eyaqk PRC8_HUMAN : 13- 23: dlsas Tf-SpdGrvfqV eyamk PRC8_RAT : 13- 23: dlsas Tf-SpdGrvfqV eyamk PRC8_YEAST : 1- 9: T--Si-GtgydL snsvf PRC9_DICDI : 10- 21: ydqrt TifSpeGrvyqV eyamt PRC9_DICDI : 163- 172: agwka T--SigGensqV aqsvl PRC9_DROME : 10- 21: ydsrt TifSpeGrlyqV eyame PRC9_HUMAN : 10- 21: ydsrt TifSpeGrlyqV eyame PRC9_RAT : 10- 21: ydsrt TifSpeGrlyqV eyame PRC9_SCHPO : 10- 21: ydsrt TifSpeGrlyqV eyale PRC9_YEAST : 11- 22: ydsrt TifSpeGrlyqV eyale PRCA_THEAC : 13- 24: ydrai TvfSpdGrlfqV eyare PRCI_HUMAN : 14- 25: fdrhi TifSpeGrlyqV eyafk PRCI_YEAST : 17- 28: ydrhi TifSpeGrlyqV eyafk PRCZ_HUMAN : 14- 24: drgvn Tf-SpeGrlfqV eydie PRCZ_HUMAN : 42- 50: aigiq T--Se-GvclaV ekrit PRCZ_RAT : 14- 24: drgvn Tf-SpeGrlfqV eyaie PRCZ_RAT : 42- 50: aigiq T--Se-GvclaV ekrit PRCZ_YEAST : 14- 24: drgvs Tf-SpeGrlfqV eysle L 12: 13.2153 35( 30) G-x(3,5)-E-x(0,1)-A-x(2)-[AEGS] Occurences: 35(30) PRC2_ARATH : 17- 28: twspt GrlfqvEyAmeA vkqgs PRC2_ARATH : 246- 256: eeege GeagegE-AeaA eaapa PRC2_ARATH : 249- 258: gegea Gegea-E-AaeA apaer PRC2_ARATH : 249- 259: gegea Gegea-EaAeaA paerg PRC2_ARATH : 251- 261: geage GeaeaaE-AapA erggg PRC2_ARATH : 251- 262: geage GeaeaaEaApaE rgggv PRC2_DROME : 17- 28: vwspq GrlhqvEyAmeA vklgt PRC2_HUMAN : 17- 28: vwspq GrihqiEyAmeA vkqgs PRC2_RAT : 17- 28: vwspq GrihqiEyAmeA vkqgs PRC2_YEAST : 17- 28: tfspt GrlfqvEyAleA ikqgs PRC3_DROME : 17- 28: tfsps GklvqlEyAlaA vsgga PRC3_HUMAN : 16- 27: tfsps GklvqiEyAlaA vagga PRC3_RAT : 16- 27: tfsps GklvqiEyAlaA vagga PRC3_XENLA : 16- 27: tfsps GklvqiEyAlaA vaaga PRC3_YEAST : 206- 215: egefn Gdti--ElAiiG denpd PRC6_ARATH : 15- 26: vfspd GhlfqvEyAleA vrkgn PRC6_DICDI : 17- 28: vfspd GhlfqvEyAmeA vrkgt PRC6_DROME : 16- 27: ifspd GhllqvEyAqeA vrkgs PRC6_DROME : 204- 214: evaqs Gqnnl-EvAimE ngkpl PRC6_YEAST : 15- 26: ifspd GhifqvEyAleA vkrgt PRC8_CAEEL : 18- 29: tfspd GrifqvEyAqkA vdnag PRC8_HUMAN : 18- 29: tfspd GrvfqvEyAmkA venss PRC8_RAT : 18- 29: tfspd GrvfqvEyAmkA venss PRC8_YEAST : 18- 29: vfspd GrnfqvEyAvkA vengt PRC9_DICDI : 16- 27: ifspe GrvyqvEyAmtA irhag PRC9_DROME : 16- 27: ifspe GrlyqvEyAmeA ishag PRC9_HUMAN : 16- 27: ifspe GrlyqvEyAmeA ighag PRC9_RAT : 16- 27: ifspe GrlyqvEyAmeA ighag PRC9_SCHPO : 16- 27: ifspe GrlyqvEyAleA inhag PRC9_YEAST : 17- 28: ifspe GrlyqvEyAleS ishag PRCA_THEAC : 19- 30: vfspd GrlfqvEyAreA vkkgs PRCI_HUMAN : 20- 31: ifspe GrlyqvEyAfkA inqgg PRCI_YEAST : 23- 34: ifspe GrlyqvEyAfkA tnqtn PRCZ_HUMAN : 171- 180: darai Gsas--EgAqsS lqely PRCZ_RAT : 19- 30: tfspe GrlfqvEyAieG hklgs PRCZ_RAT : 171- 180: darai Gsas--EgAqsS lqevy PRCZ_YEAST : 173- 182: nakai Gsgs--EgAqaE llnew M 13: 12.5102 30( 30) R-P-x-G Occurences: 30(30) PRC2_ARATH : 126- 129: qrswk RPyG vgllv PRC2_DROME : 126- 129: qrydr RPyG vgllv PRC2_HUMAN : 126- 129: qrygr RPyG vglli PRC2_RAT : 126- 129: qrygr RPyG vglli PRC2_YEAST : 126- 129: qsygg RPyG vglli PRC3_DROME : 128- 131: qsggv RPfG vslli PRC3_HUMAN : 127- 130: qsggv RPfG vslli PRC3_RAT : 127- 130: qsggv RPfG vslli PRC3_XENLA : 127- 130: qsggv RPfG vslli PRC3_YEAST : 128- 131: qsggv RPfG vslli PRC6_ARATH : 126- 129: qsggv RPfG lstli PRC6_DICDI : 128- 131: qsggv RPfG istli PRC6_DROME : 127- 130: qsngr RPfG iscli PRC6_YEAST : 127- 130: qsggv RPfG vstli PRC8_CAEEL : 128- 131: tlgis RPfG agaff PRC8_HUMAN : 129- 132: lysav RPfG csfml PRC8_RAT : 129- 132: lysav RPfG csfml PRC8_YEAST : 129- 132: lynsv RPfG vstif PRC9_DICDI : 129- 132: qyggl RPfG vsfly PRC9_DROME : 128- 131: qyggk RPfG vslly PRC9_HUMAN : 128- 131: qfggk RPfG vslly PRC9_RAT : 128- 131: qfggk RPfG vslly PRC9_SCHPO : 128- 131: qyggl RPfG vsfly PRC9_YEAST : 129- 132: qhggl RPfG vsfiy PRCA_THEAC : 130- 133: qyggv RPyG vslif PRCI_HUMAN : 132- 135: qnaem RPlG ccmil PRCI_YEAST : 135- 138: qraym RPlG viltf PRCZ_HUMAN : 135- 138: pgams RPfG vallf PRCZ_RAT : 135- 138: pgams RPfG vallf PRCZ_YEAST : 136- 139: erlms RPfG valli N 14: 12.4308 48( 30) G-x(1,2)-A-x(1,3)-G-x(4)-[ADEGNST] Occurences: 48(30) PRC2_ARATH : 32- 42: eavkq GsaAi--GlrsrS hvvla PRC2_ARATH : 32- 42: eavkq Gs-Aai-GlrsrS hvvla PRC2_ARATH : 71- 81: vddhi Gv-Aia-GltadG rvlsr PRC2_ARATH : 246- 256: eeege Ge-Age-GeaeaA eaapa PRC2_DROME : 32- 42: eavkl Gt-Atv-GlknkD yavlv PRC2_DROME : 191- 202: eiirh GirAil-GtlptD eqgkd PRC2_HUMAN : 32- 42: eavkq Gs-Atv-GlkskT havlv PRC2_RAT : 32- 42: eavkq Gs-Atv-GlkskT havlv PRC2_YEAST : 158- 167: vtely Gt-Ai--GarsqG aktyl PRC3_DROME : 31- 42: laavs Gg-ApsvGiiasN gvvia PRC3_DROME : 37- 48: gapsv GiiAsn-GvviaT enkhk PRC3_DROME : 164- 175: katam GknAvn-GktflE kryse PRC3_HUMAN : 30- 41: laava Gg-ApsvGikaaN gvvla PRC3_HUMAN : 36- 47: gapsv GikAan-GvvlaT ekkqk PRC3_RAT : 30- 41: laava Gg-ApsvGikaaN gvvla PRC3_RAT : 36- 47: gapsv GikAan-GvvlaT ekkqk PRC3_XENLA : 36- 47: gapsv GikAtn-GvvlaT ekkqk PRC3_YEAST : 36- 47: gvtsl GikAtn-GvviaT ekkss PRC6_ARATH : 30- 40: eavrk GnaAv--GvrgtD tvvla PRC6_ARATH : 30- 40: eavrk Gn-Aav-GvrgtD tvvla PRC6_DICDI : 32- 42: eavrk GtvAv--GvrgkD vivlg PRC6_DROME : 31- 41: eavrk GstAv--GvrgaN cvvlg PRC6_YEAST : 30- 40: eavkr GtcAv--GvkgkN cvvlg PRC8_CAEEL : 74- 84: vndnv Gv-Ava-GnypdG falkn PRC8_HUMAN : 74- 84: vdrhv Gm-Ava-GlladA rslad PRC8_HUMAN : 162- 171: sygyw Gc-Ai--GkarqA aktei PRC8_RAT : 74- 84: vdrhv Gm-Ava-GlladA rslad PRC8_RAT : 162- 171: sygyw Gc-Ai--GkarqA aktei PRC8_YEAST : 161- 170: ywgyk Ga-At--GkgrqS akael PRC9_DICDI : 36- 47: agatv GilAkd-GivlaA ekktt PRC9_DROME : 36- 47: agtcl GilAed-GillaA ecrst PRC9_DROME : 158- 170: sgnyg GwkAtciGnnfgA aisml PRC9_HUMAN : 36- 47: agtcl GilAnd-GvllaA errni PRC9_HUMAN : 158- 170: sgnyg GwkAtciGnnsaA avsml PRC9_RAT : 36- 47: agtcl GilAnd-GvllaA errni PRC9_RAT : 158- 170: sgnyg GwkAtciGnnsaA avsml PRC9_SCHPO : 32- 41: ainha Gv-Al--GivakD givla PRC9_SCHPO : 36- 47: agval GivAkd-GivlaA ekkvt PRC9_YEAST : 33- 42: sisha Gt-Ai--GimasD givla PRC9_YEAST : 37- 48: agtai GimAsd-GivlaA erkvt PRC9_YEAST : 159- 171: sgnyt GwkAisvGantsA aqtll PRCA_THEAC : 34- 44: eavkk GstAl--GmkfaN gvlli PRCI_HUMAN : 162- 174: agyyc GfkAtaaGvkqtE stsfl PRCI_YEAST : 165- 177: agyyv GykAtatGpkqqE ittnl PRCZ_HUMAN : 34- 44: eaikl GstAi--GiqtsE gvcla PRCZ_HUMAN : 75- 85: idahi Gc-Ams-GliadA ktlid PRCZ_RAT : 34- 44: eghkl GstAi--GiqtsE gvcla PRCZ_RAT : 75- 85: idahi Gc-Ams-GliadA ktlid PRCZ_YEAST : 34- 44: eaikl GstAi--GiatkE gvvlg PRCZ_YEAST : 75- 85: idrhi Gc-Ams-GltadA rsmie O 15: 11.5102 50( 30) G-x(0,1)-R-x(3,4)-V Occurences: 50(30) PRC2_ARATH : 17- 22: twspt G-Rlfq-V eyame PRC2_ARATH : 37- 44: gsaai GlRsrshV vlacv PRC2_DROME : 17- 22: vwspq G-Rlhq-V eyame PRC2_DROME : 265- 271: eepaa GpRdpe-V lvate PRC2_HUMAN : 124- 130: ptqry GrRpyg-V gllia PRC2_HUMAN : 124- 130: ptqry G-RrpygV gllia PRC2_RAT : 124- 130: ptqry GrRpyg-V gllia PRC2_RAT : 124- 130: ptqry G-RrpygV gllia PRC2_YEAST : 17- 22: tfspt G-Rlfq-V eyale PRC2_YEAST : 124- 130: ntqsy GgRpyg-V gllii PRC2_YEAST : 125- 130: tqsyg G-Rpyg-V gllii PRC3_DROME : 126- 132: ytqsg GvRpfg-V sllic PRC3_HUMAN : 125- 131: ytqsg GvRpfg-V sllic PRC3_RAT : 125- 131: ytqsg GvRpfg-V sllic PRC3_XENLA : 125- 131: ytqsg GvRpfg-V sllia PRC3_YEAST : 126- 132: atqsg GvRpfg-V sllia PRC6_ARATH : 35- 42: gnaav GvRgtdtV vlave PRC6_DICDI : 37- 43: gtvav GvRgkd-V ivlgv PRC6_DICDI : 165- 171: kaaai G-RssksV gefle PRC6_DROME : 36- 43: gstav GvRgancV vlgve PRC6_DROME : 164- 169: kanat G-Rsak-V vreff PRC6_DROME : 164- 170: kanat G-RsakvV reffe PRC6_YEAST : 125- 131: ytqsg GvRpfg-V stlia PRC6_YEAST : 165- 171: saqti G-RnsktV refle PRC8_CAEEL : 18- 23: tfspd G-Rifq-V eyaqk PRC8_CAEEL : 144- 150: wnkqt GgRlfl-V epsgl PRC8_CAEEL : 145- 150: nkqtg G-Rlfl-V epsgl PRC8_HUMAN : 18- 23: tfspd G-Rvfq-V eyamk PRC8_HUMAN : 38- 45: sstai GiRckdgV vfgve PRC8_HUMAN : 222- 227: geltn G-Rhei-V pkdir PRC8_RAT : 18- 23: tfspd G-Rvfq-V eyamk PRC8_RAT : 38- 45: sstai GiRckdgV vfgve PRC8_RAT : 222- 227: geltk G-Rhei-V pkdvr PRC8_YEAST : 18- 23: vfspd G-Rnfq-V eyavk PRC9_DICDI : 16- 21: ifspe G-Rvyq-V eyamt PRC9_DICDI : 127- 133: ytqyg GlRpfg-V sflya PRC9_DROME : 16- 21: ifspe G-Rlyq-V eyame PRC9_DROME : 126- 132: ytqyg GkRpfg-V sllym PRC9_HUMAN : 16- 21: ifspe G-Rlyq-V eyame PRC9_HUMAN : 126- 132: ytqfg GkRpfg-V sllyi PRC9_RAT : 16- 21: ifspe G-Rlyq-V eyame PRC9_RAT : 126- 132: ytqfg GkRpfg-V sllyi PRC9_SCHPO : 16- 21: ifspe G-Rlyq-V eyale PRC9_SCHPO : 126- 132: ytqyg GlRpfg-V sflya PRC9_YEAST : 17- 22: ifspe G-Rlyq-V eyale PRC9_YEAST : 127- 133: ytqhg GlRpfg-V sfiya PRCA_THEAC : 19- 24: vfspd G-Rlfq-V eyare PRCA_THEAC : 128- 134: ytqyg GvRpyg-V slifa PRCI_HUMAN : 20- 25: ifspe G-Rlyq-V eyafk PRCI_YEAST : 23- 28: ifspe G-Rlyq-V eyafk PRCZ_HUMAN : 19- 24: tfspe G-Rlfq-V eydie PRCZ_RAT : 19- 24: tfspe G-Rlfq-V eyaie PRCZ_YEAST : 19- 24: tfspe G-Rlfq-V eysle P 16: 11.5102 45( 30) T-x(1,2)-S-x(1,2)-G Occurences: 45(30) PRC2_ARATH : 11- 17: ydtdv TtwSptG rlfqv PRC2_ARATH : 12- 17: dtdvt Tw-SptG rlfqv PRC2_DROME : 11- 17: ydsdv TvwSpqG rlhqv PRC2_HUMAN : 11- 17: ydndv TvwSpqG rihqi PRC2_RAT : 11- 17: ydndv TvwSpqG rihqi PRC2_YEAST : 12- 17: dgdtv Tf-SptG rlfqv PRC2_YEAST : 120- 124: kaqkn Tq-Sy-G grpyg PRC2_YEAST : 120- 125: kaqkn Tq-SygG rpygv PRC3_DROME : 11- 17: ysfsl TtfSpsG klvql PRC3_DROME : 12- 17: sfslt Tf-SpsG klvql PRC3_DROME : 122- 126: lmqey Tq-Sg-G vrpfg PRC3_HUMAN : 10- 16: ysfsl TtfSpsG klvqi PRC3_HUMAN : 11- 16: sfslt Tf-SpsG klvqi PRC3_HUMAN : 121- 125: vmqey Tq-Sg-G vrpfg PRC3_RAT : 10- 16: ysfsl TtfSpsG klvqi PRC3_RAT : 11- 16: sfslt Tf-SpsG klvqi PRC3_RAT : 121- 125: vmqey Tq-Sg-G vrpfg PRC3_XENLA : 10- 16: ysfsl TtfSpsG klvqi PRC3_XENLA : 11- 16: sfslt Tf-SpsG klvqi PRC3_XENLA : 121- 125: vmqey Tq-Sg-G vrpfg PRC3_YEAST : 10- 16: ysfsl TtfSpsG klgqi PRC3_YEAST : 11- 16: sfslt Tf-SpsG klgqi PRC3_YEAST : 122- 126: imqea Tq-Sg-G vrpfg PRC6_ARATH : 9- 15: ydrai TvfSpdG hlfqv PRC6_ARATH : 120- 124: lqqky Tq-Sg-G vrpfg PRC6_DICDI : 11- 17: ydrai TvfSpdG hlfqv PRC6_DICDI : 122- 126: iqqry Tq-Sg-G vrpfg PRC6_DROME : 10- 16: ydrav TifSpdG hllqv PRC6_DROME : 121- 125: lkqky Tq-Sn-G rrpfg PRC6_YEAST : 121- 125: vqqry Tq-Sg-G vrpfg PRC8_CAEEL : 13- 18: dlaas Tf-SpdG rifqv PRC8_HUMAN : 13- 18: dlsas Tf-SpdG rvfqv PRC8_RAT : 13- 18: dlsas Tf-SpdG rvfqv PRC8_YEAST : 34- 38: aveng Tt-Si-G ikcnd PRC9_DICDI : 10- 16: ydqrt TifSpeG rvyqv PRC9_DROME : 10- 16: ydsrt TifSpeG rlyqv PRC9_HUMAN : 10- 16: ydsrt TifSpeG rlyqv PRC9_RAT : 10- 16: ydsrt TifSpeG rlyqv PRC9_SCHPO : 10- 16: ydsrt TifSpeG rlyqv PRC9_YEAST : 11- 17: ydsrt TifSpeG rlyqv PRCA_THEAC : 13- 19: ydrai TvfSpdG rlfqv PRCI_HUMAN : 14- 20: fdrhi TifSpeG rlyqv PRCI_YEAST : 17- 23: ydrhi TifSpeG rlyqv PRCZ_HUMAN : 14- 19: drgvn Tf-SpeG rlfqv PRCZ_RAT : 14- 19: drgvn Tf-SpeG rlfqv PRCZ_YEAST : 14- 19: drgvs Tf-SpeG rlfqv Q 17: 11.0102 53( 30) A-x(4,5)-L-x(2,4)-E Occurences: 53(30) PRC2_ARATH : 167- 177: gsrsq Aakty-LerrfE sfgds PRC2_ARATH : 194- 202: kdail Avret-Lqg--E tlkss PRC2_DROME : 194- 203: rhgir Ailgt-Lptd-E qgkda PRC2_HUMAN : 194- 202: khglr Alret-Lpa--E qdltt PRC2_RAT : 194- 202: khglr Alret-Lpa--E qdltt PRC2_YEAST : 196- 204: kagve Aisqs-Lrd--E sltvd PRC3_DROME : 94- 103: qarki Aqtyy-Ltyk-E pipvs PRC3_DROME : 187- 197: leldd AvhtaiLtlk-E gfegk PRC3_HUMAN : 39- 48: svgik AangvvLat--E kkqks PRC3_HUMAN : 40- 48: vgika Angvv-Lat--E kkqks PRC3_HUMAN : 93- 102: rarkl Aqqyy-Lvyq-E pipta PRC3_HUMAN : 186- 196: leled AihtaiLtlk-E sfegq PRC3_HUMAN : 215- 224: gicne Agfrr-Ltpt-E vkdyl PRC3_RAT : 39- 48: svgik AangvvLat--E kkqks PRC3_RAT : 40- 48: vgika Angvv-Lat--E kkqks PRC3_RAT : 93- 102: rarkl Aqqyy-Lvyq-E pipta PRC3_RAT : 186- 196: leled AihtaiLtlk-E sfegq PRC3_RAT : 215- 224: gicne Agfrr-Ltpt-E vrdyl PRC3_XENLA : 39- 48: svgik AtngvvLat--E kkqks PRC3_XENLA : 93- 102: rarkl Aqqyy-Lvyq-E pipta PRC3_XENLA : 186- 196: leled AihtaiLtlk-E sfegq PRC3_XENLA : 215- 224: gicne Agfkr-Ltpa-E vkdyl PRC3_YEAST : 188- 198: leled AihialLtlk-E svege PRC3_YEAST : 188- 198: leled Aihia-LltlkE svege PRC6_ARATH : 190- 199: etvkl Airal-Levv-E sggkn PRC6_DICDI : 191- 200: esikl Avral-Leiv-E sgnkn PRC6_DROME : 40- 48: vgvrg Ancvv-Lgv--E kksva PRC6_DROME : 140- 150: iggfd AdgsahLfqt-E psgif PRC6_YEAST : 93- 101: karve Aqshr-Ltl--E dpvtv PRC8_CAEEL : 173- 181: rqaak Aeiek-Lki--E eldvn PRC8_CAEEL : 173- 182: rqaak Aeiek-Lkie-E ldvnq PRC8_HUMAN : 208- 218: evkdk Afele-LswvgE ltngr PRC8_RAT : 208- 218: evkdk Afele-LswvgE ltkgr PRC8_YEAST : 195- 204: eavkq AakiiyLah--E dnkek PRC8_YEAST : 196- 204: avkqa Akiiy-Lah--E dnkek PRC9_DICDI : 39- 48: tvgil AkdgivLaa--E kktta PRC9_DROME : 39- 48: clgil AedgilLaa--E crstn PRC9_DROME : 39- 48: clgil Aedgi-Llaa-E crstn PRC9_DROME : 170- 178: gnnfg Aaism-Lkq--E ladke PRC9_HUMAN : 39- 48: clgil AndgvlLaa--E rrnih PRC9_HUMAN : 39- 48: clgil Andgv-Llaa-E rrnih PRC9_HUMAN : 94- 103: elrli Aqryl-Lqyq-E pipce PRC9_RAT : 39- 48: clgil AndgvlLaa--E rrnih PRC9_RAT : 39- 48: clgil Andgv-Llaa-E rrnih PRC9_RAT : 94- 103: elrli Aqryl-Lqyq-E pipce PRC9_SCHPO : 39- 48: algiv AkdgivLaa--E kkvts PRC9_YEAST : 40- 49: aigim AsdgivLaa--E rkvts PRC9_YEAST : 74- 85: lndki AvavagLtadaE ilint PRCA_THEAC : 171- 179: gsgkd Avvsf-Ler--E ykenl PRCA_THEAC : 196- 205: tlgik Alkss-Leeg-E elkap PRCA_THEAC : 196- 206: tlgik Alkss-LeegeE lkape PRCI_HUMAN : 233- 244: rilte AeidahLvalaE rd PRCI_YEAST : 90- 100: gpipd Arnaa-LrakaE aaefr PRCZ_HUMAN : 115- 125: esvtq AvsnlaLqfg-E edadp PRCZ_HUMAN : 115- 126: esvtq AvsnlaLqfgeE dadpg PRCZ_RAT : 115- 125: esvtq AvsnlaLqfg-E edadp PRCZ_RAT : 115- 126: esvtq AvsnlaLqfgeE dadpg PRCZ_YEAST : 95- 105: ehart AavthnLyyd-E dinve PRCZ_YEAST : 96- 105: harta Avthn-Lyyd-E dinve PRCZ_YEAST : 149- 159: iaghd AddgyqLfha-E psgtf PRCZ_YEAST : 237- 247: dnekt AelikeLkek-E aaesp R 18: 11.0102 63( 30) G-x(0,2)-R-x(3,4)-V Occurences: 63(30) PRC2_ARATH : 17- 22: twspt G--Rlfq-V eyame PRC2_ARATH : 37- 44: gsaai Gl-RsrshV vlacv PRC2_DROME : 17- 22: vwspq G--Rlhq-V eyame PRC2_DROME : 265- 271: eepaa Gp-Rdpe-V lvate PRC2_HUMAN : 124- 130: ptqry Gr-Rpyg-V gllia PRC2_HUMAN : 124- 130: ptqry G--RrpygV gllia PRC2_RAT : 124- 130: ptqry Gr-Rpyg-V gllia PRC2_RAT : 124- 130: ptqry G--RrpygV gllia PRC2_YEAST : 17- 22: tfspt G--Rlfq-V eyale PRC2_YEAST : 124- 130: ntqsy Gg-Rpyg-V gllii PRC2_YEAST : 125- 130: tqsyg G--Rpyg-V gllii PRC3_DROME : 125- 132: eytqs GgvRpfg-V sllic PRC3_DROME : 126- 132: ytqsg Gv-Rpfg-V sllic PRC3_HUMAN : 124- 131: eytqs GgvRpfg-V sllic PRC3_HUMAN : 125- 131: ytqsg Gv-Rpfg-V sllic PRC3_RAT : 124- 131: eytqs GgvRpfg-V sllic PRC3_RAT : 125- 131: ytqsg Gv-Rpfg-V sllic PRC3_XENLA : 124- 131: eytqs GgvRpfg-V sllia PRC3_XENLA : 125- 131: ytqsg Gv-Rpfg-V sllia PRC3_YEAST : 125- 132: eatqs GgvRpfg-V sllia PRC3_YEAST : 126- 132: atqsg Gv-Rpfg-V sllia PRC6_ARATH : 35- 42: gnaav Gv-RgtdtV vlave PRC6_DICDI : 37- 43: gtvav Gv-Rgkd-V ivlgv PRC6_DICDI : 165- 171: kaaai G--RssksV gefle PRC6_DROME : 36- 43: gstav Gv-RgancV vlgve PRC6_DROME : 164- 169: kanat G--Rsak-V vreff PRC6_DROME : 164- 170: kanat G--RsakvV reffe PRC6_YEAST : 124- 131: rytqs GgvRpfg-V stlia PRC6_YEAST : 125- 131: ytqsg Gv-Rpfg-V stlia PRC6_YEAST : 165- 171: saqti G--RnsktV refle PRC8_CAEEL : 18- 23: tfspd G--Rifq-V eyaqk PRC8_CAEEL : 144- 150: wnkqt Gg-Rlfl-V epsgl PRC8_CAEEL : 145- 150: nkqtg G--Rlfl-V epsgl PRC8_HUMAN : 18- 23: tfspd G--Rvfq-V eyamk PRC8_HUMAN : 38- 45: sstai Gi-RckdgV vfgve PRC8_HUMAN : 222- 227: geltn G--Rhei-V pkdir PRC8_RAT : 18- 23: tfspd G--Rvfq-V eyamk PRC8_RAT : 38- 45: sstai Gi-RckdgV vfgve PRC8_RAT : 222- 227: geltk G--Rhei-V pkdvr PRC8_YEAST : 18- 23: vfspd G--Rnfq-V eyavk PRC9_DICDI : 16- 21: ifspe G--Rvyq-V eyamt PRC9_DICDI : 126- 133: gytqy GglRpfg-V sflya PRC9_DICDI : 127- 133: ytqyg Gl-Rpfg-V sflya PRC9_DROME : 16- 21: ifspe G--Rlyq-V eyame PRC9_DROME : 125- 132: aytqy GgkRpfg-V sllym PRC9_DROME : 126- 132: ytqyg Gk-Rpfg-V sllym PRC9_HUMAN : 16- 21: ifspe G--Rlyq-V eyame PRC9_HUMAN : 125- 132: aytqf GgkRpfg-V sllyi PRC9_HUMAN : 126- 132: ytqfg Gk-Rpfg-V sllyi PRC9_RAT : 16- 21: ifspe G--Rlyq-V eyame PRC9_RAT : 125- 132: aytqf GgkRpfg-V sllyi PRC9_RAT : 126- 132: ytqfg Gk-Rpfg-V sllyi PRC9_SCHPO : 16- 21: ifspe G--Rlyq-V eyale PRC9_SCHPO : 125- 132: gytqy GglRpfg-V sflya PRC9_SCHPO : 126- 132: ytqyg Gl-Rpfg-V sflya PRC9_YEAST : 17- 22: ifspe G--Rlyq-V eyale PRC9_YEAST : 126- 133: gytqh GglRpfg-V sfiya PRC9_YEAST : 127- 133: ytqhg Gl-Rpfg-V sfiya PRCA_THEAC : 19- 24: vfspd G--Rlfq-V eyare PRCA_THEAC : 127- 134: qytqy GgvRpyg-V slifa PRCA_THEAC : 128- 134: ytqyg Gv-Rpyg-V slifa PRCI_HUMAN : 20- 25: ifspe G--Rlyq-V eyafk PRCI_YEAST : 23- 28: ifspe G--Rlyq-V eyafk PRCZ_HUMAN : 19- 24: tfspe G--Rlfq-V eydie PRCZ_RAT : 19- 24: tfspe G--Rlfq-V eyaie PRCZ_YEAST : 19- 24: tfspe G--Rlfq-V eysle S 19: 11.0102 60( 30) V-x(4,5)-K-x(3,5)-L Occurences: 60(30) PRC2_ARATH : 45- 56: srshv VlacvnKaqse-L sshqr PRC2_DROME : 36- 46: lgtat Vglkn-Kdyav-L valck PRC2_DROME : 45- 56: nkdya VlvalcKptse-L sdtqr PRC2_HUMAN : 36- 46: qgsat Vglks-Kthav-L valkr PRC2_HUMAN : 45- 56: sktha Vlval-KraqseL aahqk PRC2_RAT : 36- 46: qgsat Vglks-Kthav-L valkr PRC2_RAT : 45- 56: sktha Vlval-KraqseL aahqk PRC2_YEAST : 45- 56: sntha Vlval-KrnadeL ssyqk PRC3_DROME : 45- 56: asngv ViatenKhksp-L yeqhs PRC3_HUMAN : 43- 55: kaang VvlateKkqksiL yders PRC3_HUMAN : 44- 55: aangv VlatekKqksi-L yders PRC3_HUMAN : 44- 55: aangv Vlate-KkqksiL yders PRC3_HUMAN : 64- 73: rsvhk Vepit-Khig--L vysgm PRC3_RAT : 43- 55: kaang VvlateKkqksiL yders PRC3_RAT : 44- 55: aangv VlatekKqksi-L yders PRC3_RAT : 44- 55: aangv Vlate-KkqksiL yders PRC3_RAT : 64- 73: rsvhk Vepit-Khig--L vysgm PRC3_XENLA : 43- 55: katng VvlateKkqksiL ydeqs PRC3_XENLA : 44- 55: atngv VlatekKqksi-L ydeqs PRC3_XENLA : 44- 55: atngv Vlate-KkqksiL ydeqs PRC3_YEAST : 43- 55: katng VviateKkssspL amset PRC3_YEAST : 44- 55: atngv ViatekKsssp-L amset PRC3_YEAST : 44- 55: atngv Viate-KkssspL amset PRC6_ARATH : 42- 54: rgtdt VvlaveKkstpkL qdsrs PRC6_ARATH : 43- 54: gtdtv VlavekKstpk-L qdsrs PRC6_ARATH : 43- 54: gtdtv Vlave-KkstpkL qdsrs PRC6_DICDI : 36- 46: kgtva Vgvrg-Kdviv-L gvekk PRC6_DICDI : 45- 56: gkdvi VlgvekKatak-L qdars PRC6_DICDI : 45- 56: gkdvi Vlgve-KkatakL qdars PRC6_DROME : 43- 55: rganc VvlgveKksvaqL qedrk PRC6_DROME : 44- 55: gancv VlgvekKsvaq-L qedrk PRC6_DROME : 44- 55: gancv Vlgve-KksvaqL qedrk PRC6_DROME : 231- 242: vitdy Vkiie-KekeeeL ekkkq PRC6_YEAST : 34- 44: rgtca Vgvkg-Kncvv-L gcerr PRC6_YEAST : 188- 199: eppat Veecv-KltvrsL levvq PRC8_CAEEL : 45- 57: rgkng VvvvadKlisskL ytdna PRC8_CAEEL : 46- 57: gkngv Vvvad-KlisskL ytdna PRC8_HUMAN : 45- 57: rckdg VvfgveKlvlskL yeegs PRC8_HUMAN : 46- 57: ckdgv Vfgve-KlvlskL yeegs PRC8_HUMAN : 200- 211: kiiyi Vhdev-KdkafeL elswv PRC8_RAT : 45- 57: rckdg VvfgveKlvlskL yeegs PRC8_RAT : 46- 57: ckdgv Vfgve-KlvlskL yeegs PRC8_RAT : 200- 211: kiiyi Vhdev-KdkafeL elswv PRC8_RAT : 231- 243: ivpkd VreeaeKyakesL keede PRC8_YEAST : 45- 57: kcndg VvfaveKlitskL lvpqk PRC8_YEAST : 46- 57: cndgv Vfave-KlitskL lvpqk PRC8_YEAST : 192- 201: sarea Vkqaa-Kiiy--L ahedn PRC9_DICDI : 35- 45: hagat Vgila-Kdgiv-L aaekk PRC9_DICDI : 44- 55: akdgi VlaaekKttak-L ldsst PRC9_DICDI : 44- 55: akdgi Vlaae-KkttakL ldsst PRC9_DICDI : 44- 56: akdgi VlaaekKttaklL dssts PRC9_DICDI : 176- 187: qvaqs VlrsnyKpdis-L kealq PRC9_DROME : 227- 239: vdnkt VysvleKpdvekL iekyt PRC9_HUMAN : 59- 68: kllde Vffse-Kiyk--L nedma PRC9_RAT : 59- 68: kllde Vffse-Kiyk--L nedma PRC9_SCHPO : 44- 55: akdgi VlaaekKvtsk-L leqee PRC9_SCHPO : 44- 55: akdgi Vlaae-KkvtskL leqee PRC9_SCHPO : 44- 56: akdgi VlaaekKvtsklL eqees PRC9_YEAST : 45- 56: asdgi VlaaerKvtst-L leqdt PRC9_YEAST : 45- 57: asdgi VlaaerKvtstlL eqdts PRCA_THEAC : 46- 58: kfang VllisdKkvrsrL ieqns PRCA_THEAC : 190- 201: pekea Vtlgi-KalkssL eegee PRCI_HUMAN : 49- 60: gkdca VivtqkKvpdk-L ldsst PRCI_HUMAN : 49- 60: gkdca Vivtq-KkvpdkL ldsst PRCI_HUMAN : 49- 61: gkdca VivtqkKvpdklL dsstv PRCI_HUMAN : 220- 230: ievgv VtvenpKfri--L teaei PRCI_YEAST : 52- 63: gkdct VvisqkKvpdk-L ldptt PRCI_YEAST : 52- 63: gkdct Vvisq-KkvpdkL ldptt PRCI_YEAST : 52- 64: gkdct VvisqkKvpdklL dpttv PRCI_YEAST : 53- 63: kdctv Visqk-Kvpdk-L ldptt PRCI_YEAST : 53- 64: kdctv Visqk-KvpdklL dpttv PRCI_YEAST : 225- 236: kndle Vgvat-KdkfftL saeni PRCI_YEAST : 227- 236: dlevg Vatkd-Kfft--L saeni PRCZ_HUMAN : 46- 58: qtseg VclaveKritspL mepss PRCZ_RAT : 46- 58: qtseg VclaveKritspL mepss PRCZ_YEAST : 46- 58: atkeg VvlgveKratspL lesds PRCZ_YEAST : 47- 58: tkegv Vlgve-KratspL lesds T 20: 10.5102 68( 30) L-x(1,3)-A-x(1,3)-A Occurences: 68(30) PRC2_ARATH : 187- 194: ssred LikdAil-A vretl PRC2_DROME : 77- 81: isiag Lt--Ad--A rvlsr PRC2_HUMAN : 46- 52: kthav Lv--AlkrA qsela PRC2_HUMAN : 77- 81: isiag Lt--Ad--A rllcn PRC2_RAT : 46- 52: kthav Lv--AlkrA qsela PRC2_RAT : 77- 81: isiag Lt--Ad--A rllcn PRC2_YEAST : 72- 78: dehmg Lsl-Agl-A pdarv PRC2_YEAST : 74- 81: hmgls LaglApd-A rvlsn PRC2_YEAST : 156- 163: gnvte LygtAig-A rsqga PRC2_YEAST : 189- 196: gnpde Lik-AgveA isqsl PRC3_DROME : 22- 27: gklvq Ley-Al--A avsgg PRC3_DROME : 22- 28: gklvq Ley-Ala-A vsgga PRC3_DROME : 86- 94: pdyrl LvkqArkiA qtyyl PRC3_DROME : 184- 191: sedle Ldd-AvhtA iltlk PRC3_HUMAN : 25- 29: qieya La--Av--A ggaps PRC3_HUMAN : 25- 32: qieya LaavAgg-A psvgi PRC3_HUMAN : 85- 93: pdyrv LvhrArklA qqyyl PRC3_HUMAN : 183- 190: nedle Led-AihtA iltlk PRC3_HUMAN : 229- 233: evkdy La--Ai--A PRC3_RAT : 25- 29: qieya La--Av--A ggaps PRC3_RAT : 25- 32: qieya LaavAgg-A psvgi PRC3_RAT : 85- 93: pdyrv LvhrArklA qqyyl PRC3_RAT : 183- 190: nedle Led-AihtA iltlk PRC3_RAT : 229- 233: evrdy La--Ai--A PRC3_XENLA : 25- 29: qieya La--Av--A agaps PRC3_XENLA : 25- 30: qieya La--Ava-A gapsv PRC3_XENLA : 25- 32: qieya LaavAag-A psvgi PRC3_XENLA : 85- 93: pdyrv LvrrArklA qqyyl PRC3_XENLA : 183- 190: nedle Led-AihtA iltlk PRC3_XENLA : 229- 233: evkdy La--Ai--A PRC3_YEAST : 185- 192: ndele Led-AihiA lltlk PRC6_ARATH : 72- 79: dnhia Lac-AglkA darvl PRC6_ARATH : 77- 81: lacag Lk--Ad--A rvlin PRC6_DICDI : 74- 81: ddhic Ltf-AgltA dsrvl PRC6_DICDI : 228- 234: qeidk Lv--AvveA ekeiq PRC6_DROME : 78- 82: mafag Lt--Ad--A rimin PRC6_YEAST : 85- 93: adsri LiekArveA qshrl PRC8_CAEEL : 87- 95: pdgfa LknyAygeA mkwlk PRC8_HUMAN : 80- 84: mavag Ll--Ad--A rslad PRC8_HUMAN : 80- 88: mavag LladArslA diare PRC8_HUMAN : 81- 88: avagl Lad-ArslA diare PRC8_HUMAN : 87- 95: adars LadiAreeA snfrs PRC8_HUMAN : 108- 116: gynip LkhlAdrvA myvha PRC8_RAT : 80- 84: mavag Ll--Ad--A rslad PRC8_RAT : 80- 88: mavag LladArslA diare PRC8_RAT : 81- 88: avagl Lad-ArslA diare PRC8_RAT : 87- 95: adars LadiAreeA snfrs PRC8_RAT : 108- 116: gynip LkhlAdrvA myvha PRC8_YEAST : 186- 191: hhpeg Ls--Are-A vkqaa PRC8_YEAST : 234- 242: fvkgd LlqeAidfA qkein PRC8_YEAST : 235- 242: vkgdl Lqe-AidfA qkein PRC9_DICDI : 187- 194: kpdis Lke-AlqlA lkvlt PRC9_DROME : 187- 192: kenvk Ltl-Ad--A kdlai PRC9_DROME : 189- 196: nvklt Lad-AkdlA ikvls PRC9_HUMAN : 186- 191: egemt Lks-Al--A laikv PRC9_HUMAN : 186- 193: egemt Lks-AlalA ikvln PRC9_RAT : 186- 191: egemt Lks-Al--A lavkv PRC9_RAT : 186- 193: egemt Lks-AlalA vkvln PRC9_SCHPO : 25- 31: qveya Le--AinhA gvalg PRC9_SCHPO : 73- 77: igdnm Lc--Av--A gltad PRC9_SCHPO : 73- 81: igdnm LcavAgltA danil PRC9_SCHPO : 79- 83: cavag Lt--Ad--A nilin PRC9_SCHPO : 185- 190: kddin Lde-As--A mavkf PRC9_SCHPO : 185- 192: kddin Lde-AsamA vkfls PRC9_YEAST : 80- 84: vavag Lt--Ad--A eilin PRC9_YEAST : 87- 95: adaei LintArihA qnylk PRCA_THEAC : 81- 85: avtsg Lv--Ad--A rvlvd PRCA_THEAC : 88- 96: adarv LvdfArisA qqekv PRCA_THEAC : 207- 213: eegee Lk--ApeiA sitvg PRCI_HUMAN : 230- 237: pkfri Lte-AeidA hlval PRCI_HUMAN : 239- 243: eidah Lv--Al--A erd PRCI_YEAST : 95- 99: arnaa Lr--Ak--A eaaef PRCI_YEAST : 95- 101: arnaa LrakAe--A aefry PRCI_YEAST : 95- 102: arnaa LrakAea-A efryk PRCI_YEAST : 95- 101: arnaa Lr--AkaeA aefry PRCI_YEAST : 245- 249: nieer Lv--Ai--A eqd PRCZ_HUMAN : 81- 85: camsg Li--Ad--A ktlid PRCZ_RAT : 81- 85: camsg Li--Ad--A ktlid PRCZ_YEAST : 33- 41: leaik LgstAigiA tkegv PRCZ_YEAST : 81- 85: camsg Lt--Ad--A rsmie PRCZ_YEAST : 142- 149: pfgva Lli-AghdA ddgyq PRCZ_YEAST : 143- 149: fgval Li--AghdA ddgyq Number of patterns evaluated by Pratt:1238 Total running time: 4 seconds