------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 29 sequences from file PGM_PMM PATTERN CONSERVATION: CM: min Nr of Seqs to Match 29 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename PGM_PMM.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ALGC_PSEAE 462 CPSG_ECOLI 456 CPSG_SALCH 456 CPSG_SALTY 456 EXOC_AZOBR 658 MRSA_ECOLI 445 MRSA_HAEIN 445 PCM1_SCHPO 518 PCM1_YEAST 557 PGM1_YEAST 570 PGM2_YEAST 569 PGMU_ACEXY 555 PGMU_AGRTU 542 PGMU_ECOLI 546 PGMU_HUMAN 561 PGMU_NEIGO 460 PGMU_NEIME 460 PGMU_RABIT 561 PGMU_RAT 561 PGMV_RABIT 565 RFBB_VIBCH 463 RFBK_SALCH 478 RFBK_SALTY 477 RFK7_ECOLI 453 RFK9_ECOLI 456 UREC_HELPY 445 XANA_XANCP 448 YA81_SCHPO 301 YRP8_METVA 132 Pratt run started at Thu Feb 6 20:39:33 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 32( 29) D-G-x(2,3)-R 2: 11.5102 47( 29) G-x(2,3)-T-x(0,1)-A 3: 11.0102 75( 29) G-x(0,2)-I-x(1,2)-L 4: 11.0102 81( 29) L-x(2,3)-L-x(0,2)-A 5: 11.0102 78( 29) L-x(2,4)-L-x(0,1)-A 6: 11.0102 84( 29) D-x(0,1)-G-x(0,2)-I 7: 11.0102 39( 29) G-x(0,2)-D-x(1,2)-D 8: 10.5102 46( 29) V-x(0,2)-L-x(3,5)-D 9: 10.5102 61( 29) A-x(1,3)-D-x(0,2)-V 10: 10.5102 73( 29) A-x(0,2)-D-x(0,2)-V 11: 10.5102 73( 29) A-x(1,3)-G-x(1,3)-L 12: 10.5102 49( 29) N-x(3,5)-A-x(1,3)-V 13: 10.5102 67( 29) F-x(0,2)-D-x(0,2)-G 14: 10.5102 70( 29) G-x(1,3)-D-x(1,3)-L 15: 8.3401 90( 29) A-S 16: 8.3401 66( 29) G-x-S 17: 8.3401 97( 29) G-x(2)-A 18: 8.3401 39( 29) S-H 19: 8.3401 80( 29) F-x(5)-G 20: 8.3401 78( 29) A-x(3)-K Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 14.1443 31( 29) S-H-x-[GIPV]-x(3)-[AEGNST]-[EGNQT] B 2: 12.0102 32( 29) D-G-x(2,3)-R C 3: 11.5102 47( 29) G-x(2,3)-T-x(0,1)-A D 4: 11.0102 75( 29) G-x(0,2)-I-x(1,2)-L E 5: 11.0102 81( 29) L-x(2,3)-L-x(0,2)-A F 6: 11.0102 78( 29) L-x(2,4)-L-x(0,1)-A G 7: 11.0102 84( 29) D-x(0,1)-G-x(0,2)-I H 8: 11.0102 39( 29) G-x(0,2)-D-x(1,2)-D I 9: 10.5102 46( 29) V-x(0,2)-L-x(3,5)-D J 10: 10.5102 61( 29) A-x(1,3)-D-x(0,2)-V K 11: 10.5102 73( 29) A-x(0,2)-D-x(0,2)-V L 12: 10.5102 73( 29) A-x(1,3)-G-x(1,3)-L M 13: 10.5102 49( 29) N-x(3,5)-A-x(1,3)-V N 14: 10.5102 67( 29) F-x(0,2)-D-x(0,2)-G O 15: 10.5102 70( 29) G-x(1,3)-D-x(1,3)-L P 16: 8.3401 90( 29) A-S Q 17: 8.3401 66( 29) G-x-S R 18: 8.3401 97( 29) G-x(2)-A S 19: 8.3401 80( 29) F-x(5)-G T 20: 8.3401 78( 29) A-x(3)-K Best patterns with alignements: fitness hits(seqs) Pattern A 1: 14.1443 31( 29) S-H-x-[GIPV]-x(3)-[AEGNST]-[EGNQT] Occurences: 31(29) ALGC_PSEAE : 107- 115: vmltg SHnPpdyNG fkivv CPSG_ECOLI : 98- 106: ievta SHnPmdyNG mklvr CPSG_SALCH : 98- 106: ievta SHnPmdyNG mklvr CPSG_SALTY : 98- 106: ievta SHnPmdyNG mklvr EXOC_AZOBR : 295- 303: imitg SHnPpdyNG ikmml MRSA_ECOLI : 102- 110: ivisa SHnPfydNG ikffs MRSA_HAEIN : 102- 110: ivisa SHnPyydNG ikffs PCM1_SCHPO : 51- 59: vmita SHnPvedNG vkiid PCM1_YEAST : 67- 75: vmita SHnPyqdNG vkive PGM1_YEAST : 100- 108: stpaa SHiIrtyEE kctgg PGM1_YEAST : 120- 128: iilta SHnPggpEN dlgik PGM2_YEAST : 119- 127: iilta SHnPggpEN dmgik PGMU_ACEXY : 148- 156: vvitp SHnPpedGG ykynp PGMU_AGRTU : 112- 120: ivlsa SHnPggpTE dfgik PGMU_ECOLI : 146- 154: ivitp SHnPpedGG ikynp PGMU_HUMAN : 116- 124: iilta SHnPggpNG dfgik PGMU_NEIGO : 103- 111: vmitg SHnPpdyNG fkmml PGMU_NEIME : 103- 111: vmitg SHnPpdyNG fkmml PGMU_RABIT : 116- 124: iilta SHnPggpNG dfgik PGMU_RAT : 116- 124: iilta SHnPggpNG dfgik PGMV_RABIT : 120- 128: iilta SHnPggpNG dfgik RFBB_VIBCH : 103- 111: ievta SHnPmdyNG mklvr RFBK_SALCH : 111- 119: imvtg SHiPfdrNG lkfyr RFBK_SALTY : 111- 119: imvtg SHiPferNG lkfyr RFK7_ECOLI : 96- 104: ievta SHnPmdyNG mklvr RFK9_ECOLI : 98- 106: ievta SHnPmnyNG mklvr UREC_HELPY : 99- 107: imisa SHnPfedNG ikffn XANA_XANCP : 97- 105: vmvta SHnPmdyNG mklvr YA81_SCHPO : 163- 171: lskii SHeVlspAQ fnalk YRP8_METVA : 18- 26: ivlta SHnPkeyTG fkmcd YRP8_METVA : 122- 130: wkfps SHkGksaST sv B 2: 12.0102 32( 29) D-G-x(2,3)-R Occurences: 32(29) ALGC_PSEAE : 241- 246: lglaf DGdgdR vgvvt CPSG_ECOLI : 245- 250: mgiaf DGdfdR cflfd CPSG_SALCH : 245- 250: mgiaf DGdfdR cflfd CPSG_SALTY : 245- 250: mgiaf DGdfdR cflfd EXOC_AZOBR : 429- 434: igigf DGdgdR igaid MRSA_ECOLI : 10- 15: kyfgt DGirgR vgdap MRSA_ECOLI : 241- 246: lgiaf DGdgdR vimvd MRSA_HAEIN : 241- 246: vglay DGdgdR immvd PCM1_SCHPO : 267- 272: lyasi DGdadR lifyy PCM1_YEAST : 298- 303: lycsf DGdadR vvfyy PGM1_YEAST : 291- 296: fgaas DGdgdR nmiyg PGM2_YEAST : 290- 295: fgaas DGdgdR nmiyg PGMU_ACEXY : 276- 280: mtadw DGqi-R mdcss PGMU_AGRTU : 276- 281: fgaas DGdgdR nmvvg PGMU_ECOLI : 274- 278: mhldk DGai-R mdcss PGMU_HUMAN : 287- 292: fgaaf DGdgdR nmilg PGMU_HUMAN : 480- 485: ysdpv DGsisR nqglr PGMU_NEIGO : 239- 244: iglaf DGdadR lgvvt PGMU_NEIME : 136- 140: siiek DGfa-R agkqg PGMU_NEIME : 239- 244: iglaf DGdadR lgvvt PGMU_RABIT : 287- 292: fgaaf DGdgdR nmilg PGMU_RAT : 287- 292: fgaaf DGdgdR nmilg PGMV_RABIT : 291- 296: fgaaf DGdgdR nmilg RFBB_VIBCH : 248- 253: mgiaf DGdfdR cflfd RFBK_SALCH : 245- 250: aifst DGdgdR pliad RFBK_SALTY : 245- 250: aifst DGdgdR pliad RFK7_ECOLI : 243- 248: mgiaf DGdfdR cflfd RFK9_ECOLI : 246- 251: mgiaf DGdfdR cflfd UREC_HELPY : 242- 247: lgfaf DGdadR lvvvd XANA_XANCP : 237- 242: fgiaw DGdfdR cfffd YA81_SCHPO : 51- 56: rcasf DGdadR ivyfa YRP8_METVA : 94- 98: yessi DGlv-R vpskd C 3: 11.5102 47( 29) G-x(2,3)-T-x(0,1)-A Occurences: 47(29) ALGC_PSEAE : 23- 28: irrvv GdtlT-A etayw CPSG_ECOLI : 92- 97: lgvdg GievT-A shnpm CPSG_ECOLI : 409- 415: vdrtd GismTfA dwrfn CPSG_SALCH : 92- 97: lgvdg GievT-A shnpm CPSG_SALTY : 92- 97: lgvdg GievT-A shnpm EXOC_AZOBR : 211- 216: irgiv GstlT-A adara EXOC_AZOBR : 211- 217: irgiv GstlTaA darav MRSA_ECOLI : 77- 83: salft GpmpTpA vaylt MRSA_HAEIN : 77- 83: saaft GpmpTpA iaylt PCM1_SCHPO : 13- 18: sygta Gfr-TkA sdlea PCM1_SCHPO : 45- 50: kgkti GvmiT-A shnpv PCM1_SCHPO : 314- 319: mpfsl GvvqT-A yanga PCM1_YEAST : 29- 34: sygta Gfr-TlA knldt PCM1_YEAST : 61- 66: qgqyv GvmiT-A shnpy PCM1_YEAST : 347- 352: hslki GvvqT-A yangs PCM1_YEAST : 356- 360: tayan Gss-T-A yiknt PGM1_YEAST : 92- 98: vigqg GllsTpA ashii PGM1_YEAST : 114- 119: kctgg GiilT-A shnpg PGM2_YEAST : 92- 98: vigqh GllsTpA ashim PGM2_YEAST : 113- 118: ekctg GiilT-A shnpg PGMU_ACEXY : 85- 90: gplfi Gid-ThA lsrpa PGMU_AGRTU : 87- 93: lvgqg GilsTpA asnvi PGMU_AGRTU : 486- 490: vlrls Gtg-T-A gatlr PGMU_ECOLI : 84- 89: gpcyv Gkd-ThA lsepa PGMU_ECOLI : 116- 122: vqenn GftpTpA vsnai PGMU_ECOLI : 311- 316: dydrh Giv-TpA glmnp PGMU_ECOLI : 475- 480: astla GdpiT-A rltaa PGMU_HUMAN : 91- 97: vigqn GilsTpA vscii PGMU_HUMAN : 110- 115: ikaig GiilT-A shnpg PGMU_NEIGO : 117- 122: fkmml Ggd-TlA geaiq PGMU_NEIME : 117- 122: fkmml Ggd-TlA geaiq PGMU_RABIT : 91- 97: vigqn GilsTpA vscii PGMU_RABIT : 110- 115: ikaig GiilT-A shnpg PGMU_RAT : 91- 97: vigqn GilsTpA vscii PGMU_RAT : 110- 115: ikaig GiilT-A shnpg PGMV_RABIT : 95- 101: vigqn GilsTpA vscii PGMV_RABIT : 114- 119: ikaig GiilT-A shnpg RFBB_VIBCH : 97- 102: lgvdg GievT-A shnpm RFBK_SALCH : 87- 93: ktvyy GvipTpA lahqs RFBK_SALTY : 87- 93: ncify GvvpTpA lafqs RFK7_ECOLI : 90- 95: lgvdg GievT-A shnpm RFK9_ECOLI : 92- 97: lgvdg GievT-A shnpm UREC_HELPY : 74- 80: nviqi GpmpTpA iaflt XANA_XANCP : 91- 96: lkaag GvmvT-A shnpm XANA_XANCP : 137- 141: dtaaa Gep-T-A aehsr XANA_XANCP : 137- 142: dtaaa Gep-TaA ehsrt YA81_SCHPO : 97- 102: ldlqv GivqT-A yanga YA81_SCHPO : 106- 110: tayan Gas-T-A ffqkt YRP8_METVA : 12- 17: dnfdl GivlT-A shnpk D 4: 11.0102 75( 29) G-x(0,2)-I-x(1,2)-L Occurences: 75(29) ALGC_PSEAE : 400- 405: aqwge Gn-IttL dgvrv CPSG_ECOLI : 263- 269: gqfie GyyIvgL laeaf CPSG_ECOLI : 344- 349: aycds Gm-IpwL lvael CPSG_SALCH : 263- 269: gqfie GyyIvgL laeaf CPSG_SALCH : 344- 349: aycds Gm-IpwL lvael CPSG_SALCH : 438- 442: nvesr Gd-Ip-L meart CPSG_SALTY : 263- 269: gqfie GyyIvgL laeaf CPSG_SALTY : 344- 349: aycds Gm-IpwL lvael CPSG_SALTY : 438- 442: nvesr Gd-Ip-L meart EXOC_AZOBR : 436- 441: dgdri Ga-IdhL grvvw MRSA_ECOLI : 328- 333: gaens GhvIl-L dkttt MRSA_HAEIN : 405- 409: rlegk Gr-Il-L rksgt PCM1_SCHPO : 407- 413: inqai GdaIsdL latis PCM1_YEAST : 320- 326: fhlld GdkIstL fakfl PGM1_YEAST : 112- 117: eekct GggIi-L tashn PGM1_YEAST : 113- 117: ekctg Gg-Ii-L tashn PGM1_YEAST : 114- 117: kctgg G--Ii-L tashn PGM1_YEAST : 330- 334: yfakq G--IygL arsfp PGM1_YEAST : 519- 524: gtgss GatIr-L yveky PGM2_YEAST : 82- 86: igaan G--IkkL vigqh PGM2_YEAST : 112- 116: eekct Gg-Ii-L tashn PGM2_YEAST : 113- 116: ekctg G--Ii-L tashn PGM2_YEAST : 329- 333: yfakq G--IygL arsfp PGM2_YEAST : 518- 523: gtgss GatIr-L yieky PGMU_ACEXY : 234- 238: sgvsi G--IdpL ggaav PGMU_ACEXY : 414- 417: stdkd G--Ii-L gllaa PGMU_ACEXY : 414- 419: stdkd Gi-IlgL laaei PGMU_ACEXY : 492- 498: napgn GaaIggL kvsak PGMU_AGRTU : 105- 109: kykaf Gg-Iv-L sashn PGMU_AGRTU : 106- 109: ykafg G--Iv-L sashn PGMU_AGRTU : 195- 200: elfdf Ga-IrsL iaggf PGMU_AGRTU : 469- 473: vsknq G--IriL feggs PGMU_AGRTU : 477- 482: ilfeg GsrIv-L rlsgt PGMU_ECOLI : 411- 416: stdkd Gi-ImcL laaei PGMU_ECOLI : 489- 495: aapgn GasIggL kvmtd PGMU_HUMAN : 81- 85: iaaan G--IgrL vigqn PGMU_HUMAN : 109- 113: kikai Gg-Ii-L tashn PGMU_HUMAN : 110- 113: ikaig G--Ii-L tashn PGMU_HUMAN : 510- 515: gtgsa GatIr-L yidsy PGMU_NEIGO : 71- 75: gltds G--IsvL nvgmv PGMU_NEIGO : 123- 129: gdtla GeaIqeL laive PGMU_NEIME : 71- 75: gftds G--InvL nvgmv PGMU_NEIME : 123- 129: gdtla GeaIqeL lsiie PGMU_NEIME : 162- 166: lkhit Gh-Ir-L krpmn PGMU_RABIT : 81- 85: iaaan G--IgrL vigqn PGMU_RABIT : 109- 113: kikai Gg-Ii-L tashn PGMU_RABIT : 110- 113: ikaig G--Ii-L tashn PGMU_RABIT : 510- 515: gtgsa GatIr-L yidsy PGMU_RAT : 81- 85: iaaan G--IgrL vigqn PGMU_RAT : 109- 113: kikai Gg-Ii-L tashn PGMU_RAT : 110- 113: ikaig G--Ii-L tashn PGMU_RAT : 510- 515: gtgsa GatIr-L yidsy PGMV_RABIT : 85- 89: maaan G--IgrL vigqn PGMV_RABIT : 113- 117: kikai Gg-Ii-L tashn PGMV_RABIT : 114- 117: ikaig G--Ii-L tashn PGMV_RABIT : 514- 519: gtgsa GatIr-L yidsy RFBB_VIBCH : 186- 192: gngaa GhvIdeL ekrfi RFBB_VIBCH : 266- 272: gdfie GyyIvgL laeaf RFBB_VIBCH : 347- 352: gycds Gm-IpwL litel RFBB_VIBCH : 413- 416: fsaid G--Is-L efegw RFBK_SALCH : 263- 268: gnwlr Gd-IlgL lcsle RFBK_SALTY : 263- 268: gewlr Gd-IlgL lcsla RFBK_SALTY : 426- 431: tdmtd GmrIt-L rdgci RFBK_SALTY : 434- 439: itlrd Gc-IvhL rasgn RFK7_ECOLI : 261- 267: gqfie GyyIvgL laeaf RFK7_ECOLI : 341- 346: aycdt Gm-IpwL lvael RFK9_ECOLI : 264- 270: asfie GyyIvgL laeaf RFK9_ECOLI : 345- 350: aycds Gm-IpwL lvael UREC_HELPY : 157- 163: iddvi GryIahL khsfp XANA_XANCP : 180- 185: gngga Gl-IvdL laphl XANA_XANCP : 293- 298: mveda Gg-IpvL cksgh XANA_XANCP : 294- 298: vedag G--IpvL cksgh XANA_XANCP : 336- 341: ayads Gm-IpwL liael YA81_SCHPO : 72- 78: fhlld GdkIcaL faqfl YA81_SCHPO : 190- 196: inqtd GdaItnL llvev YRP8_METVA : 12- 15: dnfdl G--Iv-L tashn E 5: 11.0102 81( 29) L-x(2,3)-L-x(0,2)-A Occurences: 81(29) ALGC_PSEAE : 222- 227: gkpen Lkd-Li-A kvkae ALGC_PSEAE : 262- 267: iypdr Llm-Lf-A kdvvs CPSG_ECOLI : 54- 59: ltset LklaL--A kglqd CPSG_ECOLI : 58- 65: tlkla LakgLqdA gvdvl CPSG_SALCH : 54- 59: ltsea LklaL--A kglqd CPSG_SALCH : 58- 65: alkla LakgLqdA gvdvl CPSG_SALCH : 193- 198: aiear Lka-Lg-A pvefi CPSG_SALTY : 54- 59: ltsea LnvaL--A kglqd CPSG_SALTY : 58- 65: alnva LakgLqdA gvdvl CPSG_SALTY : 193- 198: aiear Lka-Lg-A pvefi EXOC_AZOBR : 111- 117: lgegr Lrp-LdgA dcvai EXOC_AZOBR : 410- 415: tvekn Lvd-Lk-A avaeh EXOC_AZOBR : 410- 416: tvekn Lvd-LkaA vaehg MRSA_ECOLI : 58- 64: isgym LesaLe-A glaaa MRSA_ECOLI : 62- 67: mlesa LeagL--A aagls MRSA_ECOLI : 62- 68: mlesa LeagLa-A aglsa MRSA_ECOLI : 62- 69: mlesa LeagLaaA glsal MRSA_ECOLI : 194- 199: iapnv Lre-Lg-A nviai MRSA_ECOLI : 346- 350: givag Lqv-L--A amarn MRSA_ECOLI : 346- 351: givag Lqv-La-A marnh MRSA_HAEIN : 58- 64: isgym LesaLe-A glaaa MRSA_HAEIN : 62- 67: mlesa LeagL--A aagls MRSA_HAEIN : 62- 68: mlesa LeagLa-A aglsa MRSA_HAEIN : 62- 69: mlesa LeagLaaA glsaa MRSA_HAEIN : 194- 199: iapnv Lre-Lg-A eviei MRSA_HAEIN : 346- 350: givas Lav-L--A amaqh MRSA_HAEIN : 346- 351: givas Lav-La-A maqhk MRSA_HAEIN : 359- 363: qhkls Lne-L--A savkl MRSA_HAEIN : 359- 365: qhkls Lne-LasA vklfp PCM1_SCHPO : 374- 378: fsdka Lan-L--A hpfft PCM1_SCHPO : 437- 442: ntykd LpnkL--A kvkvs PCM1_YEAST : 237- 242: iggpq LkklL--A sedwd PCM1_YEAST : 237- 242: iggpq Lkk-Ll-A sedwd PCM1_YEAST : 331- 338: lfakf LskqLelA hlehs PCM1_YEAST : 450- 454: aisdm Lav-L--A tlail PCM1_YEAST : 453- 457: dmlav Lat-L--A ilkms PGM1_YEAST : 402- 406: aiiaw Lni-L--A iyhrr PGM2_YEAST : 401- 405: aimaw Lni-L--A iynkh PGMU_ACEXY : 417- 421: kdgii Lgl-L--A aeita PGMU_ACEXY : 417- 422: kdgii Lgl-La-A eitar PGMU_ACEXY : 482- 488: agepi Lst-LtnA pgnga PGMU_AGRTU : 224- 230: yavei LekrLg-A pkgsv PGMU_AGRTU : 431- 436: tlvai LrekL--A tlpgt PGMU_ECOLI : 99- 103: afisv Lev-L--A angvd PGMU_ECOLI : 99- 104: afisv Lev-La-A ngvdv PGMU_HUMAN : 236- 242: yvkki LceeLg-A pansa PGMU_HUMAN : 391- 396: rekdg LwavL--A wlsil PGMU_HUMAN : 398- 402: avlaw Lsi-L--A trkqs PGMU_NEIGO : 220- 225: skpen Lqd-Li-A alkng PGMU_NEIGO : 220- 226: skpen Lqd-LiaA lkngd PGMU_NEIGO : 346- 352: yagar LleiLs-A sdnps PGMU_NEIGO : 347- 352: agarl Lei-Ls-A sdnps PGMU_NEIME : 220- 225: skpkn Lqd-Li-A alkng PGMU_NEIME : 220- 226: skpkn Lqd-LiaA lkngd PGMU_NEIME : 346- 352: yagar LleiLs-A sdnpt PGMU_NEIME : 347- 352: agarl Lei-Ls-A sdnpt PGMU_RABIT : 236- 242: yvkki LceeLg-A pansa PGMU_RABIT : 391- 396: rekdg LwavL--A wlsil PGMU_RABIT : 398- 402: avlaw Lsi-L--A trkqs PGMU_RAT : 236- 242: yvkki LceeLg-A pansa PGMU_RAT : 391- 396: rekdg LwavL--A wlsil PGMU_RAT : 398- 402: avlaw Lsi-L--A trkqr PGMV_RABIT : 240- 246: yvkki LceeLg-A pansa PGMV_RABIT : 395- 400: rekdg LwavL--A wlsil PGMV_RABIT : 402- 406: avlaw Lsi-L--A trkqs RFBB_VIBCH : 59- 64: ltsea LkqaL--A nglmd RFBB_VIBCH : 63- 70: alkqa LangLmdA ginvi RFBB_VIBCH : 357- 361: llite Lls-L--A pdisl RFBB_VIBCH : 366- 372: apdis Lsk-LisA krflf RFBK_SALCH : 196- 202: dlykt LfkmLg-A tvvsl RFBK_SALCH : 268- 275: gdilg LlcsLelA adava RFBK_SALCH : 269- 275: dilgl Lcs-LelA adava RFBK_SALCH : 371- 377: ksise LvkkLp-A rytys RFBK_SALTY : 192- 199: sagrd LykpLfiA lgaev RFBK_SALTY : 196- 202: dlykp LfiaLg-A evvsl RFBK_SALTY : 268- 273: gdilg LlcsL--A ldaea RFBK_SALTY : 269- 273: dilgl Lcs-L--A ldaea RFK7_ECOLI : 52- 57: ltset LklaL--A kglqd RFK7_ECOLI : 56- 63: tlkla LakgLqdA gvdvl RFK7_ECOLI : 410- 414: whqhd Lcr-L--A altca RFK7_ECOLI : 410- 415: whqhd Lcr-La-A ltcas RFK7_ECOLI : 413- 419: hdlcr Laa-LtcA ssnte RFK9_ECOLI : 54- 59: ltses LklaL--A rglmd RFK9_ECOLI : 58- 65: slkla LargLmdA gtdvl RFK9_ECOLI : 363- 368: lknss Lks-Lv-A drqaa UREC_HELPY : 176- 183: lnlqs LrivLdtA ngaay UREC_HELPY : 417- 423: gtenk LrilLe-A kdekl UREC_HELPY : 417- 423: gtenk Lri-LleA kdekl XANA_XANCP : 19- 24: rvpde LnedL--A rrigv XANA_XANCP : 53- 59: laspa LqeaLs-A glras XANA_XANCP : 57- 63: alqea LsagLr-A sgrev XANA_XANCP : 181- 187: nggag LivdLl-A phlpf XANA_XANCP : 258- 263: iegyy LvglL--A qaila XANA_XANCP : 258- 263: iegyy Lvg-Ll-A qaila XANA_XANCP : 258- 265: iegyy LvglLaqA ilakq XANA_XANCP : 354- 360: qsgrs Lad-LveA rmqkf YA81_SCHPO : 127- 133: cvspg Lkh-LyhA aqayd YRP8_METVA : 11- 17: kdnfd LgivLt-A shnpk F 6: 11.0102 78( 29) L-x(2,4)-L-x(0,1)-A Occurences: 78(29) ALGC_PSEAE : 222- 227: gkpen Lkd--LiA kvkae ALGC_PSEAE : 262- 267: iypdr Llm--LfA kdvvs CPSG_ECOLI : 54- 59: ltset Lkla-L-A kglqd CPSG_SALCH : 54- 59: ltsea Lkla-L-A kglqd CPSG_SALCH : 193- 198: aiear Lka--LgA pvefi CPSG_SALTY : 54- 59: ltsea Lnva-L-A kglqd CPSG_SALTY : 193- 198: aiear Lka--LgA pvefi EXOC_AZOBR : 246- 253: gydgr LsspeLeA amvdg EXOC_AZOBR : 410- 415: tvekn Lvd--LkA avaeh MRSA_ECOLI : 58- 64: isgym Lesa-LeA glaaa MRSA_ECOLI : 62- 67: mlesa Leag-L-A aagls MRSA_ECOLI : 62- 68: mlesa Leag-LaA aglsa MRSA_ECOLI : 66- 73: aleag LaaagLsA lftgp MRSA_ECOLI : 194- 199: iapnv Lre--LgA nviai MRSA_ECOLI : 225- 231: tdvra LqarvL-A ekadl MRSA_ECOLI : 346- 350: givag Lqv--L-A amarn MRSA_ECOLI : 346- 351: givag Lqv--LaA marnh MRSA_HAEIN : 58- 64: isgym Lesa-LeA glaaa MRSA_HAEIN : 62- 67: mlesa Leag-L-A aagls MRSA_HAEIN : 62- 68: mlesa Leag-LaA aglsa MRSA_HAEIN : 66- 73: aleag LaaagLsA aftgp MRSA_HAEIN : 194- 199: iapnv Lre--LgA eviei MRSA_HAEIN : 297- 304: ialkm LgvpfLrA nvgdr MRSA_HAEIN : 346- 350: givas Lav--L-A amaqh MRSA_HAEIN : 346- 351: givas Lav--LaA maqhk MRSA_HAEIN : 357- 363: maqhk LslneL-A savkl MRSA_HAEIN : 359- 363: qhkls Lne--L-A savkl PCM1_SCHPO : 374- 378: fsdka Lan--L-A hpfft PCM1_SCHPO : 437- 442: ntykd Lpnk-L-A kvkvs PCM1_YEAST : 237- 242: iggpq Lkkl-L-A sedwd PCM1_YEAST : 237- 242: iggpq Lkk--LlA sedwd PCM1_YEAST : 421- 427: lsksk LngdtL-A lrtlk PCM1_YEAST : 450- 454: aisdm Lav--L-A tlail PCM1_YEAST : 453- 457: dmlav Lat--L-A ilkms PGM1_YEAST : 206- 212: ifdfd LiksfL-A kqrkd PGM1_YEAST : 402- 406: aiiaw Lni--L-A iyhrr PGM2_YEAST : 401- 405: aimaw Lni--L-A iynkh PGMU_ACEXY : 417- 421: kdgii Lgl--L-A aeita PGMU_ACEXY : 417- 422: kdgii Lgl--LaA eitar PGMU_AGRTU : 224- 230: yavei Lekr-LgA pkgsv PGMU_AGRTU : 431- 436: tlvai Lrek-L-A tlpgt PGMU_ECOLI : 99- 103: afisv Lev--L-A angvd PGMU_ECOLI : 99- 104: afisv Lev--LaA ngvdv PGMU_HUMAN : 236- 242: yvkki Lcee-LgA pansa PGMU_HUMAN : 391- 396: rekdg Lwav-L-A wlsil PGMU_HUMAN : 398- 402: avlaw Lsi--L-A trkqs PGMU_NEIGO : 116- 122: gfkmm LggdtL-A geaiq PGMU_NEIGO : 220- 225: skpen Lqd--LiA alkng PGMU_NEIGO : 346- 352: yagar Llei-LsA sdnps PGMU_NEIGO : 347- 352: agarl Lei--LsA sdnps PGMU_NEIME : 116- 122: gfkmm LggdtL-A geaiq PGMU_NEIME : 220- 225: skpkn Lqd--LiA alkng PGMU_NEIME : 346- 352: yagar Llei-LsA sdnpt PGMU_NEIME : 347- 352: agarl Lei--LsA sdnpt PGMU_RABIT : 236- 242: yvkki Lcee-LgA pansa PGMU_RABIT : 391- 396: rekdg Lwav-L-A wlsil PGMU_RABIT : 398- 402: avlaw Lsi--L-A trkqs PGMU_RAT : 236- 242: yvkki Lcee-LgA pansa PGMU_RAT : 391- 396: rekdg Lwav-L-A wlsil PGMU_RAT : 398- 402: avlaw Lsi--L-A trkqr PGMV_RABIT : 240- 246: yvkki Lcee-LgA pansa PGMV_RABIT : 395- 400: rekdg Lwav-L-A wlsil PGMV_RABIT : 402- 406: avlaw Lsi--L-A trkqs RFBB_VIBCH : 59- 64: ltsea Lkqa-L-A nglmd RFBB_VIBCH : 357- 361: llite Lls--L-A pdisl RFBK_SALCH : 196- 202: dlykt Lfkm-LgA tvvsl RFBK_SALCH : 269- 275: dilgl LcsleL-A adava RFBK_SALCH : 269- 276: dilgl LcsleLaA davai RFBK_SALCH : 371- 377: ksise Lvkk-LpA rytys RFBK_SALTY : 196- 202: dlykp Lfia-LgA evvsl RFBK_SALTY : 268- 273: gdilg Llcs-L-A ldaea RFBK_SALTY : 269- 273: dilgl Lcs--L-A ldaea RFBK_SALTY : 269- 276: dilgl LcslaLdA eavai RFBK_SALTY : 463- 469: nraqd LvnttL-A nikkr RFK7_ECOLI : 52- 57: ltset Lkla-L-A kglqd RFK7_ECOLI : 410- 414: whqhd Lcr--L-A altca RFK7_ECOLI : 410- 415: whqhd Lcr--LaA ltcas RFK9_ECOLI : 54- 59: ltses Lkla-L-A rglmd RFK9_ECOLI : 363- 368: lknss Lks--LvA drqaa UREC_HELPY : 417- 423: gtenk Lril-LeA kdekl XANA_XANCP : 19- 24: rvpde Lned-L-A rrigv XANA_XANCP : 53- 59: laspa Lqea-LsA glras XANA_XANCP : 57- 63: alqea Lsag-LrA sgrev XANA_XANCP : 181- 187: nggag LivdlL-A phlpf XANA_XANCP : 181- 187: nggag Livd-LlA phlpf XANA_XANCP : 258- 263: iegyy Lvgl-L-A qaila XANA_XANCP : 258- 263: iegyy Lvg--LlA qaila XANA_XANCP : 262- 268: ylvgl LaqaiL-A kqpgg YA81_SCHPO : 198- 204: itnll LveviL-A hknct YRP8_METVA : 11- 17: kdnfd Lgiv-LtA shnpk G 7: 11.0102 84( 29) D-x(0,1)-G-x(0,2)-I Occurences: 84(29) ALGC_PSEAE : 339- 342: rwfgf DdG--I ysaar ALGC_PSEAE : 340- 342: wfgfd D-G--I ysaar CPSG_ECOLI : 90- 93: fhlgv DgG--I evtas CPSG_ECOLI : 90- 93: fhlgv D-Gg-I evtas CPSG_ECOLI : 239- 242: ikhga DmG--I afdgd CPSG_ECOLI : 342- 346: dfayc DsGm-I pwllv CPSG_ECOLI : 408- 410: avdrt D-G--I smtfa CPSG_SALCH : 90- 93: fhlgv DgG--I evtas CPSG_SALCH : 90- 93: fhlgv D-Gg-I evtas CPSG_SALCH : 239- 242: iehga DmG--I afdgd CPSG_SALCH : 342- 346: dfayc DsGm-I pwllv CPSG_SALTY : 90- 93: fhlgv DgG--I evtas CPSG_SALTY : 90- 93: fhlgv D-Gg-I evtas CPSG_SALTY : 239- 242: iehga DmG--I afdgd CPSG_SALTY : 342- 346: dfayc DsGm-I pwllv EXOC_AZOBR : 320- 324: grqil DiGa-I askad EXOC_AZOBR : 423- 426: aehgc DiG--I gfdgd EXOC_AZOBR : 431- 435: igfdg D-GdrI gaidh MRSA_ECOLI : 10- 12: kyfgt D-G--I rgrvg MRSA_ECOLI : 108- 111: hnpfy DnG--I kffsi MRSA_ECOLI : 235- 238: laeka DlG--I afdgd MRSA_ECOLI : 258- 262: egnkv D-GdqI myiia MRSA_ECOLI : 340- 342: ktttg D-G--I vaglq MRSA_HAEIN : 108- 111: hnpyy DnG--I kffsa MRSA_HAEIN : 243- 247: laydg D-GdrI mmvdh MRSA_HAEIN : 258- 262: lgnkv D-GdqI lfiia MRSA_HAEIN : 340- 342: knttg D-G--I vasla PCM1_SCHPO : 57- 62: hnpve DnGvkI idadg PCM1_SCHPO : 137- 141: sasyi DyGy-I ttpql PCM1_SCHPO : 288- 292: kfhll D-GdkI stalv PCM1_SCHPO : 331- 334: teylq DlG--I ttvft PCM1_YEAST : 73- 78: hnpyq DnGvkI vepdg PCM1_YEAST : 319- 323: kfhll D-GdkI stlfa PCM1_YEAST : 389- 392: aatqy DiG--I yfean PGM1_YEAST : 129- 132: ggpen DlG--I kynlp PGM1_YEAST : 489- 492: syrdl D-Gs-I senqg PGM2_YEAST : 128- 131: ggpen DmG--I kynls PGM2_YEAST : 169- 173: dfpel DlGt-I gknkk PGMU_ACEXY : 141- 145: ssdla D-GvvI tpshn PGMU_ACEXY : 276- 279: mtadw D-Gq-I rmdcs PGMU_ACEXY : 413- 415: wstdk D-G--I ilgll PGMU_ACEXY : 413- 416: wstdk D-Gi-I lglla PGMU_AGRTU : 121- 124: ggpte DfG--I kynig PGMU_AGRTU : 193- 197: meelf DfGa-I rslia PGMU_ECOLI : 139- 141: ggpla D-G--I vitps PGMU_ECOLI : 139- 143: ggpla D-GivI tpshn PGMU_ECOLI : 152- 155: hnppe DgG--I kynpp PGMU_ECOLI : 152- 155: hnppe D-Gg-I kynpp PGMU_ECOLI : 274- 277: mhldk D-Ga-I rmdcs PGMU_ECOLI : 410- 412: wstdk D-G--I imcll PGMU_ECOLI : 410- 413: wstdk D-Gi-I mclla PGMU_HUMAN : 125- 128: ggpng DfG--I kfnis PGMU_HUMAN : 480- 483: ysdpv D-Gs-I srnqg PGMU_HUMAN : 495- 499: rlift D-GsrI vfrls PGMU_NEIGO : 69- 72: qrglt DsG--I svlnv PGMU_NEIGO : 251- 254: gvvtk D-Gn-I iypdr PGMU_NEIGO : 251- 255: gvvtk D-GniI ypdrq PGMU_NEIME : 69- 72: rrgft DsG--I nvlnv PGMU_NEIME : 251- 254: gvvtk D-Gn-I iypdr PGMU_NEIME : 251- 255: gvvtk D-GniI ypdrq PGMU_RABIT : 125- 128: ggpng DfG--I kfnis PGMU_RABIT : 495- 499: rlifa D-GsrI ifrls PGMU_RAT : 125- 128: ggpng DfG--I kfnis PGMU_RAT : 480- 483: ysdpv D-Gs-I sknqg PGMU_RAT : 495- 499: rlifa D-GsrI ifrls PGMV_RABIT : 129- 132: ggpng DfG--I kfnis PGMV_RABIT : 499- 503: rlifa D-GsrI ifrls RFBB_VIBCH : 69- 72: anglm DaG--I nvidi RFBB_VIBCH : 95- 98: fylgv DgG--I evtas RFBB_VIBCH : 95- 98: fylgv D-Gg-I evtas RFBB_VIBCH : 242- 245: kehka DmG--I afdgd RFBB_VIBCH : 345- 349: dfgyc DsGm-I pwlli RFBB_VIBCH : 412- 414: hfsai D-G--I slefe RFBK_SALCH : 126- 129: kfyrp D-Ge-I tkdde RFBK_SALCH : 425- 429: hsdvt D-GfrI tidnn RFBK_SALTY : 126- 129: kfyrp D-Ge-I tkhde RFBK_SALTY : 425- 429: stdmt D-GmrI tlrdg RFBK_SALTY : 433- 436: ritlr D-Gc-I vhlra RFK7_ECOLI : 88- 91: fhlgv DgG--I evtas RFK7_ECOLI : 88- 91: fhlgv D-Gg-I evtas RFK7_ECOLI : 237- 240: ikhga DmG--I afdgd RFK7_ECOLI : 339- 343: dfayc DtGm-I pwllv RFK9_ECOLI : 90- 93: fhlgv DgG--I evtas RFK9_ECOLI : 90- 93: fhlgv D-Gg-I evtas RFK9_ECOLI : 240- 243: rehqa DmG--I afdgd RFK9_ECOLI : 343- 347: dfayc DsGm-I pwllv RFK9_ECOLI : 409- 411: hidtt D-G--I sieyp RFK9_ECOLI : 409- 413: hidtt D-GisI eypew UREC_HELPY : 91- 94: edmrc DaG--I misas UREC_HELPY : 91- 96: edmrc DaGimI sashn UREC_HELPY : 105- 108: hnpfe DnG--I kffns XANA_XANCP : 231- 234: kehga DfG--I awdgd XANA_XANCP : 291- 295: vemve DaGg-I pvlck XANA_XANCP : 334- 338: efaya DsGm-I pwlli XANA_XANCP : 400- 402: eldyt D-G--I sadfg YA81_SCHPO : 71- 75: sfhll D-GdkI calfa YA81_SCHPO : 189- 193: linqt D-GdaI tnlll YRP8_METVA : 10- 13: tkdnf DlG--I vltas H 8: 11.0102 39( 29) G-x(0,2)-D-x(1,2)-D Occurences: 39(29) ALGC_PSEAE : 242- 245: glafd G--Dg-D rvgvv CPSG_ECOLI : 66- 71: glqda Gv-DvlD igmsg CPSG_ECOLI : 246- 249: giafd G--Df-D rcflf CPSG_SALCH : 66- 71: glqda Gv-DvlD igmsg CPSG_SALCH : 246- 249: giafd G--Df-D rcflf CPSG_SALTY : 66- 71: glqda Gv-DvlD igmsg CPSG_SALTY : 246- 249: giafd G--Df-D rcflf EXOC_AZOBR : 427- 431: cdigi Gf-Dg-D gdrig EXOC_AZOBR : 430- 433: gigfd G--Dg-D rigai EXOC_AZOBR : 590- 595: rlmae Ga-DvnD idgvr MRSA_ECOLI : 242- 245: giafd G--Dg-D rvimv MRSA_HAEIN : 242- 245: glayd G--Dg-D rimmv PCM1_SCHPO : 268- 271: yasid G--Da-D rlify PCM1_YEAST : 299- 302: ycsfd G--Da-D rvvfy PCM1_YEAST : 502- 508: llnpv GlqDkiD lvvak PGM1_YEAST : 292- 295: gaasd G--Dg-D rnmiy PGM2_YEAST : 291- 294: gaasd G--Dg-D rnmiy PGMU_ACEXY : 165- 170: npphg GpaDt-D itkvv PGMU_ACEXY : 294- 300: marlv GmkDkfD iafan PGMU_AGRTU : 277- 280: gaasd G--Dg-D rnmvv PGMU_ECOLI : 214- 220: qpfve GlaDivD maaiq PGMU_HUMAN : 288- 291: gaafd G--Dg-D rnmil PGMU_NEIGO : 240- 243: glafd G--Da-D rlgvv PGMU_NEIME : 240- 243: glafd G--Da-D rlgvv PGMU_RABIT : 288- 291: gaafd G--Dg-D rnmil PGMU_RAT : 288- 291: gaafd G--Dg-D rnmil PGMV_RABIT : 292- 295: gaafd G--Dg-D rnmil RFBB_VIBCH : 249- 252: giafd G--Df-D rcflf RFBK_SALCH : 246- 249: ifstd G--Dg-D rplia RFBK_SALCH : 400- 406: slinl GltDqeD flqyi RFBK_SALTY : 246- 249: ifstd G--Dg-D rplia RFK7_ECOLI : 64- 69: glqda Gv-DvlD igmsg RFK7_ECOLI : 244- 247: giafd G--Df-D rcflf RFK9_ECOLI : 66- 71: glmda Gt-DvlD iglsg RFK9_ECOLI : 247- 250: giafd G--Df-D rcflf UREC_HELPY : 243- 246: gfafd G--Da-D rlvvv XANA_XANCP : 238- 241: giawd G--Df-D rcfff YA81_SCHPO : 52- 55: casfd G--Da-D rivyf YRP8_METVA : 4- 10: myf GtkDnfD lgivl I 9: 10.5102 46( 29) V-x(0,2)-L-x(3,5)-D Occurences: 46(29) ALGC_PSEAE : 64- 73: sgpel VkqLiqglvD cgcqv ALGC_PSEAE : 198- 206: algcs VipLycev-D gnfpn ALGC_PSEAE : 427- 435: snttp VlvLrfea-D peeel ALGC_PSEAE : 429- 435: ttpvl V--Lrfea-D peeel CPSG_ECOLI : 126- 134: tglrd VqrLaean-D fppvd CPSG_ECOLI : 351- 359: ipwll VaeLvclk-D ktlge CPSG_SALCH : 126- 134: tglrd VqrLaeag-D fppvn CPSG_SALTY : 56- 64: sealn Va-LakglqD agvdv CPSG_SALTY : 126- 134: tglrd VqrLaeag-D fppvn EXOC_AZOBR : 200- 205: tfhpt V--Lrey--D irgiv EXOC_AZOBR : 347- 354: ikday VerLlrd--D dgtrd EXOC_AZOBR : 347- 355: ikday VerLlrdd-D gtrdl EXOC_AZOBR : 387- 394: vpgkh Vl-Lfdei-D gnfpn EXOC_AZOBR : 387- 394: vpgkh V--LlfdeiD gnfpn MRSA_ECOLI : 229- 235: alqar V--Laeka-D lgiaf MRSA_HAEIN : 45- 50: qgskm V--Ligk--D trisg MRSA_HAEIN : 236- 243: etkad Vg-Laydg-D gdrim MRSA_HAEIN : 250- 258: drimm VdhLgnkv-D gdqil MRSA_HAEIN : 299- 308: lkmlg VpfLranvgD ryvle PCM1_SCHPO : 419- 426: latis V--LnalhwD asaws PCM1_YEAST : 501- 508: kllnp Vg-Lqdki-D lvvak PGM1_YEAST : 195- 203: pakay VqfLkeif-D fdlik PGM2_YEAST : 194- 202: itkdy VnfLkeif-D fdlik PGMU_ACEXY : 214- 222: yitpy VddLaavv-D mdvir PGMU_AGRTU : 170- 179: igsfk VdeLtvdviD pvady PGMU_ECOLI : 101- 108: isvle V--LaangvD vivqe PGMU_ECOLI : 212- 220: lvqpf VegLadiv-D maaiq PGMU_HUMAN : 168- 175: kvdlg V--LgkqqfD lenkf PGMU_NEIGO : 196- 204: glgne VteLfcev-D gnfpn PGMU_NEIGO : 428- 434: ttpil V--Lrfea-D tqaai PGMU_NEIME : 196- 204: glgne VteLfcdv-D gtfpn PGMU_NEIME : 428- 434: ttpil V--Lrfea-D tqeai PGMU_RABIT : 168- 175: kvdlg V--LgkqqfD lenkf PGMU_RAT : 168- 175: kvdlg V--LgkqqfD lenkf PGMV_RABIT : 172- 179: kvdlg V--LgkqqfD lenkf RFBB_VIBCH : 152- 160: gnykk VslLpeyv-D hlisy RFBB_VIBCH : 152- 160: gnykk Vs-LlpeyvD hlisy RFBK_SALCH : 204- 211: mlgat VvsLars--D efvpi RFBK_SALCH : 205- 211: lgatv Vs-Lars--D efvpi RFBK_SALTY : 204- 211: algae VvsLgrs--D nfvpi RFBK_SALTY : 205- 211: lgaev Vs-Lgrs--D nfvpi RFK7_ECOLI : 124- 132: tglrd VqrLaean-D fppvd RFK9_ECOLI : 151- 157: lrqis V--Lkeyv-D hlmgy RFK9_ECOLI : 156- 164: vlkey VdhLmgyv-D lanft UREC_HELPY : 202- 207: elgad V--Lvin--D epngc XANA_XANCP : 29- 36: arrig Va-Laaql-D qgpvv YA81_SCHPO : 181- 189: ktlkt VfeLinqt-D gdait YRP8_METVA : 47- 52: fkakg V--Lsee--D vkkah YRP8_METVA : 80- 86: plkdr Ve-Lmgi--D rryes J 10: 10.5102 61( 29) A-x(1,3)-D-x(0,2)-V Occurences: 61(29) ALGC_PSEAE : 267- 270: llmlf Ak--D--V vsrnp ALGC_PSEAE : 267- 271: llmlf Ak--Dv-V srnpg CPSG_ECOLI : 65- 69: kglqd Agv-D--V ldigm CPSG_SALCH : 65- 69: kglqd Agv-D--V ldigm CPSG_SALTY : 65- 69: kglqd Agv-D--V ldigm EXOC_AZOBR : 253- 260: spele AamvDglV acglh EXOC_AZOBR : 254- 260: pelea Amv-DglV acglh EXOC_AZOBR : 325- 331: digai AskaDy-V sgegs EXOC_AZOBR : 376- 382: sgedp App-DreV pgkhv EXOC_AZOBR : 455- 458: lvaiy Aa--D--V lkshp EXOC_AZOBR : 588- 593: ssrlm AegaD--V ndidg MRSA_ECOLI : 219- 222: naevg At--D--V ralqa MRSA_ECOLI : 304- 311: ipfar AkvgDryV lekmq MRSA_HAEIN : 219- 222: nekcg At--D--V talqa MRSA_HAEIN : 304- 311: vpflr AnvgDryV lekmv PCM1_SCHPO : 350- 357: hlhka AkefDigV yfean PCM1_YEAST : 34- 40: gfrtl AknlDt-V mfstg PCM1_YEAST : 242- 248: lkkll Ase-DwdV paeqv PGM1_YEAST : 343- 347: fptss Ai--Dr-V aakkg PGM2_YEAST : 342- 346: fptsg Ai--Dr-V akahg PGMU_ACEXY : 218- 225: yvddl AavvDmdV iresg PGMU_ACEXY : 219- 225: vddla Avv-DmdV iresg PGMU_AGRTU : 325- 330: smpts Aaa-Dr-V aeklg PGMU_AGRTU : 326- 330: mptsa Aa--Dr-V aeklg PGMU_AGRTU : 455- 460: aaddf Ayh-Dp-V dqsvs PGMU_ECOLI : 104- 109: levla AngvD--V ivqen PGMU_ECOLI : 104- 111: levla AngvDviV qenng PGMU_ECOLI : 353- 358: tlvss Ami-Dr-V vndlg PGMU_ECOLI : 353- 359: tlvss Ami-DrvV ndlgr PGMU_HUMAN : 157- 164: tieey AvcpDlkV dlgvl PGMU_HUMAN : 268- 272: pnlty Aa--Dl-V etmks PGMU_HUMAN : 339- 343: mptsg Al--Dr-V asatk PGMU_HUMAN : 460- 464: gkqfs An--Dk-V ytvek PGMU_NEIGO : 155- 161: kdisg Ayh-DhiV ghvkl PGMU_NEIGO : 265- 268: qlmlf Aq--D--V lnrnp PGMU_NEIME : 265- 268: qlmlf Aq--D--V lnrnp PGMU_NEIME : 277- 281: npgak Aif-D--V estrl PGMU_RABIT : 157- 164: tieey AicpDlkV dlgvl PGMU_RABIT : 268- 272: pnlty Aa--Dl-V etmks PGMU_RABIT : 339- 343: mptsg Al--Dr-V anatk PGMU_RABIT : 460- 464: gkqfs An--Dk-V ytvek PGMU_RAT : 157- 164: tieey AicpDlkV dlgvl PGMU_RAT : 268- 272: pnlty Aa--Dl-V etmks PGMU_RAT : 339- 343: mptsg Al--Dr-V anatk PGMU_RAT : 460- 464: gkqfs An--Dk-V ytvek PGMV_RABIT : 161- 168: tieey AicpDlkV dlgvl PGMV_RABIT : 272- 276: pnlty Aa--Dl-V etmks PGMV_RABIT : 343- 347: mptsg Al--Dr-V anatk PGMV_RABIT : 464- 468: gkqfs An--Dk-V ytvek RFBB_VIBCH : 445- 451: skqni AlmnDk-V eeltk RFBK_SALCH : 208- 214: tvvsl Ars-DefV pidte RFBK_SALCH : 275- 279: cslel Aa--Da-V aipvs RFBK_SALTY : 74- 81: aqaca AalaDkgV ncify RFBK_SALTY : 75- 81: qacaa Ala-DkgV ncify RFBK_SALTY : 460- 464: nllnr Aq--Dl-V nttla RFK7_ECOLI : 63- 67: kglqd Agv-D--V ldigm RFK9_ECOLI : 65- 69: rglmd Agt-D--V ldigl UREC_HELPY : 149- 155: esvgs AkriDd-V igryi UREC_HELPY : 307- 313: elkhc Aig-DkfV secmr UREC_HELPY : 338- 345: ifsdy AktgDglV calqv XANA_XANCP : 124- 129: dtglf Air-Dt-V aadta YA81_SCHPO : 134- 139: hlyha AqayD--V gvffe YA81_SCHPO : 134- 141: hlyha AqayDvgV ffean YA81_SCHPO : 136- 139: yhaaq Ay--D--V gvffe YA81_SCHPO : 136- 141: yhaaq Ay--DvgV ffean YRP8_METVA : 56- 62: edvkk Ahi-DeyV vgany K 11: 10.5102 73( 29) A-x(0,2)-D-x(0,2)-V Occurences: 73(29) ALGC_PSEAE : 267- 270: llmlf Ak-D--V vsrnp ALGC_PSEAE : 267- 271: llmlf Ak-Dv-V srnpg CPSG_ECOLI : 65- 69: kglqd AgvD--V ldigm CPSG_SALCH : 65- 69: kglqd AgvD--V ldigm CPSG_SALTY : 65- 69: kglqd AgvD--V ldigm EXOC_AZOBR : 117- 120: rpldg A--Dc-V ailte EXOC_AZOBR : 254- 260: pelea AmvDglV acglh EXOC_AZOBR : 328- 331: aiask A--Dy-V sgegs EXOC_AZOBR : 376- 382: sgedp AppDreV pgkhv EXOC_AZOBR : 455- 458: lvaiy Aa-D--V lkshp EXOC_AZOBR : 456- 458: vaiya A--D--V lkshp EXOC_AZOBR : 469- 471: gatii A--D--V kasqt EXOC_AZOBR : 591- 593: lmaeg A--D--V ndidg MRSA_ECOLI : 219- 222: naevg At-D--V ralqa MRSA_ECOLI : 439- 442: fahri A--Da-V kav MRSA_HAEIN : 219- 222: nekcg At-D--V talqa MRSA_HAEIN : 234- 236: vvetk A--D--V glayd PCM1_SCHPO : 240- 243: nngcg A--Df-V ktkqs PCM1_YEAST : 242- 248: lkkll AseDwdV paeqv PCM1_YEAST : 272- 275: nfecg A--Dy-V ktnqr PCM1_YEAST : 301- 304: sfdgd A--Dr-V vfyyv PCM1_YEAST : 301- 305: sfdgd A--DrvV fyyvd PGM1_YEAST : 343- 347: fptss Ai-Dr-V aakkg PGM1_YEAST : 540- 542: nygqt A--D--V flkpv PGM2_YEAST : 246- 249: efglp A--De-V lqnwh PGM2_YEAST : 342- 346: fptsg Ai-Dr-V akahg PGMU_ACEXY : 140- 143: rssdl A--Dg-V vitps PGMU_ACEXY : 140- 144: rssdl A--DgvV itpsh PGMU_ACEXY : 219- 225: vddla AvvDmdV iresg PGMU_AGRTU : 325- 330: smpts AaaDr-V aeklg PGMU_AGRTU : 326- 330: mptsa Aa-Dr-V aeklg PGMU_AGRTU : 327- 330: ptsaa A--Dr-V aeklg PGMU_AGRTU : 455- 460: aaddf AyhDp-V dqsvs PGMU_ECOLI : 138- 142: kggpl A--DgiV itpsh PGMU_ECOLI : 165- 169: pnggp A--DtnV tkvve PGMU_ECOLI : 216- 219: fvegl A--Di-V dmaai PGMU_ECOLI : 353- 358: tlvss AmiDr-V vndlg PGMU_ECOLI : 353- 359: tlvss AmiDrvV ndlgr PGMU_HUMAN : 268- 272: pnlty Aa-Dl-V etmks PGMU_HUMAN : 269- 272: nltya A--Dl-V etmks PGMU_HUMAN : 339- 343: mptsg Al-Dr-V asatk PGMU_HUMAN : 460- 464: gkqfs An-Dk-V ytvek PGMU_NEIGO : 155- 161: kdisg AyhDhiV ghvkl PGMU_NEIGO : 265- 268: qlmlf Aq-D--V lnrnp PGMU_NEIME : 265- 268: qlmlf Aq-D--V lnrnp PGMU_NEIME : 277- 281: npgak AifD--V estrl PGMU_RABIT : 268- 272: pnlty Aa-Dl-V etmks PGMU_RABIT : 269- 272: nltya A--Dl-V etmks PGMU_RABIT : 339- 343: mptsg Al-Dr-V anatk PGMU_RABIT : 460- 464: gkqfs An-Dk-V ytvek PGMU_RAT : 268- 272: pnlty Aa-Dl-V etmks PGMU_RAT : 269- 272: nltya A--Dl-V etmks PGMU_RAT : 339- 343: mptsg Al-Dr-V anatk PGMU_RAT : 460- 464: gkqfs An-Dk-V ytvek PGMV_RABIT : 272- 276: pnlty Aa-Dl-V etmks PGMV_RABIT : 273- 276: nltya A--Dl-V etmks PGMV_RABIT : 343- 347: mptsg Al-Dr-V anatk PGMV_RABIT : 464- 468: gkqfs An-Dk-V ytvek RFBB_VIBCH : 42- 46: ksend A--DktV vvggd RFBK_SALCH : 208- 214: tvvsl ArsDefV pidte RFBK_SALCH : 275- 279: cslel Aa-Da-V aipvs RFBK_SALCH : 276- 279: slela A--Da-V aipvs RFBK_SALTY : 75- 81: qacaa AlaDkgV ncify RFBK_SALTY : 77- 81: caaal A--DkgV ncify RFBK_SALTY : 460- 464: nllnr Aq-Dl-V nttla RFK7_ECOLI : 63- 67: kglqd AgvD--V ldigm RFK9_ECOLI : 65- 69: rglmd AgtD--V ldigl RFK9_ECOLI : 231- 234: crqdt A--Da-V rehqa UREC_HELPY : 200- 202: fselg A--D--V lvind UREC_HELPY : 200- 204: fselg A--DvlV indep UREC_HELPY : 245- 249: afdgd A--DrlV vvdnl UREC_HELPY : 307- 313: elkhc AigDkfV secmr XANA_XANCP : 124- 129: dtglf AirDt-V aadta XANA_XANCP : 355- 358: sgrsl A--Dl-V earmq YA81_SCHPO : 26- 29: nnscg A--Df-V rtqqk YA81_SCHPO : 54- 58: sfdgd A--DriV yfafg YA81_SCHPO : 136- 139: yhaaq Ay-D--V gvffe YA81_SCHPO : 136- 141: yhaaq Ay-DvgV ffean YRP8_METVA : 56- 62: edvkk AhiDeyV vgany L 12: 10.5102 73( 29) A-x(1,3)-G-x(1,3)-L Occurences: 73(29) ALGC_PSEAE : 37- 43: ywigr Ai--GsesL argep CPSG_ECOLI : 31- 36: wrigr Ay--Gef-L kpkti CPSG_SALCH : 31- 36: wrigr Ay--Gey-L kpkti CPSG_SALTY : 31- 36: wrigr Ay--Gey-L kpktv EXOC_AZOBR : 219- 225: ltaad AravGr--L rhrgr EXOC_AZOBR : 221- 225: aadar Av--Gr--L rhrgr EXOC_AZOBR : 261- 267: vdglv Ac--GlhvL riglg EXOC_AZOBR : 482- 489: lfdei ArlgGnp-L mwktg EXOC_AZOBR : 482- 489: lfdei Arl-GgnpL mwktg EXOC_AZOBR : 503- 509: lkakm Aet-Gsp-L agems EXOC_AZOBR : 604- 609: vrvkd Ad--Gww-L lrasn EXOC_AZOBR : 604- 610: vrvkd Ad--GwwlL rasnt MRSA_ECOLI : 32- 37: lklgw Aa--Gkv-L arhgs MRSA_ECOLI : 67- 74: leagl Aaa-GlsaL ftgpm MRSA_ECOLI : 68- 74: eagla Aa--GlsaL ftgpm MRSA_ECOLI : 280- 284: qlrgg Av--Gt--L msnmg MRSA_ECOLI : 324- 332: gwrig AensGhviL ldktt MRSA_ECOLI : 380- 386: nvryt Ags-Gdp-L ehesv MRSA_HAEIN : 32- 37: lklgw Aa--Gkv-L asqgs MRSA_HAEIN : 116- 121: ikffs Ak--Gtk-L pdeie MRSA_HAEIN : 270- 276: iiare AlrsGq--L kggvv MRSA_HAEIN : 379- 385: invrf Ag--GenpL esdav PCM1_SCHPO : 65- 70: vkiid Adg-Gm--L amewe PCM1_SCHPO : 65- 70: vkiid Ad--Ggm-L amewe PCM1_SCHPO : 200- 208: vvvdc AngvGsqpL ktvag PCM1_SCHPO : 295- 300: dkist Alv-Gy--L nilvk PCM1_SCHPO : 361- 368: gvyfe AnghGtv-L fsdka PCM1_YEAST : 229- 237: lfidt AngiGgpqL kklla PGM1_YEAST : 79- 86: iaavg Aan-GvrkL vigqg PGM1_YEAST : 80- 86: aavga An--GvrkL vigqg PGM1_YEAST : 327- 334: eipyf Akq-GiygL arsfp PGM2_YEAST : 79- 86: iaaig Aan-GikkL vigqh PGM2_YEAST : 80- 86: aaiga An--GikkL vigqh PGM2_YEAST : 326- 333: eipyf Akq-GiygL arsfp PGMU_ACEXY : 76- 82: dyrkg AgitGp--L figid PGMU_ACEXY : 362- 369: midrv AkeiGrk-L vevpv PGMU_ACEXY : 493- 498: apgng Aai-Gg--L kvsak PGMU_ACEXY : 494- 498: pgnga Ai--Gg--L kvsak PGMU_AGRTU : 75- 82: ikmaa AagfGkv-L vgqgg PGMU_AGRTU : 76- 82: kmaaa Agf-Gkv-L vgqgg PGMU_AGRTU : 103- 109: irkyk Afg-Giv-L sashn PGMU_AGRTU : 103- 109: irkyk Af--GgivL sashn PGMU_ECOLI : 286- 291: cssec Ama-Gl--L alrdk PGMU_ECOLI : 286- 293: cssec Ama-GllaL rdkfd PGMU_ECOLI : 344- 349: wgkdv Av--Gkt-L vssam PGMU_ECOLI : 490- 495: apgng Asi-Gg--L kvmtd PGMU_HUMAN : 77- 85: liari AaanGigrL vigqn PGMU_HUMAN : 78- 85: iaria Aan-GigrL vigqn PGMU_HUMAN : 79- 85: ariaa AngiGr--L vigqn PGMU_HUMAN : 79- 85: ariaa An--GigrL vigqn PGMU_HUMAN : 107- 113: irkik Aig-Gii-L tashn PGMU_HUMAN : 107- 113: irkik Ai--GgiiL tashn PGMU_NEIGO : 183- 188: ngvgg Afa-Gk--L ykglg PGMU_NEIME : 183- 188: ngvgg Afa-Gk--L ykglg PGMU_RABIT : 77- 85: livri AaanGigrL vigqn PGMU_RABIT : 78- 85: ivria Aan-GigrL vigqn PGMU_RABIT : 79- 85: vriaa AngiGr--L vigqn PGMU_RABIT : 79- 85: vriaa An--GigrL vigqn PGMU_RABIT : 107- 113: irkik Aig-Gii-L tashn PGMU_RABIT : 107- 113: irkik Ai--GgiiL tashn PGMU_RAT : 77- 85: livri AaanGigrL vigqn PGMU_RAT : 78- 85: ivria Aan-GigrL vigqn PGMU_RAT : 79- 85: vriaa AngiGr--L vigqn PGMU_RAT : 79- 85: vriaa An--GigrL vigqn PGMU_RAT : 107- 113: irkik Aig-Gii-L tashn PGMU_RAT : 107- 113: irkik Ai--GgiiL tashn PGMV_RABIT : 81- 89: tilqm AaanGigrL vigqn PGMV_RABIT : 82- 89: ilqma Aan-GigrL vigqn PGMV_RABIT : 83- 89: lqmaa AngiGr--L vigqn PGMV_RABIT : 83- 89: lqmaa An--GigrL vigqn PGMV_RABIT : 111- 117: irkik Aig-Gii-L tashn PGMV_RABIT : 111- 117: irkik Ai--GgiiL tashn RFBB_VIBCH : 410- 416: sihfs Aid-Gis-L efegw RFBK_SALCH : 254- 261: drpli AdeyGnw-L rgdil RFBK_SALCH : 327- 332: iagfe Ang-Gf--L lgsdv RFBK_SALCH : 327- 332: iagfe An--Ggf-L lgsdv RFBK_SALCH : 327- 333: iagfe Ang-Gfl-L gsdvy RFBK_SALCH : 327- 333: iagfe An--GgflL gsdvy RFBK_SALTY : 254- 261: drpli AdeaGew-L rgdil RFBK_SALTY : 327- 332: ivgfe Ang-Gf--L lgsdi RFBK_SALTY : 327- 332: ivgfe An--Ggf-L lgsdi RFBK_SALTY : 327- 333: ivgfe Ang-Gfl-L gsdic RFBK_SALTY : 327- 333: ivgfe An--GgflL gsdic RFK7_ECOLI : 29- 34: wrigr Ay--Gef-L kpkti RFK9_ECOLI : 31- 36: yrigr Ay--Gef-L kpgki RFK9_ECOLI : 141- 146: ppvdp Arr-Gt--L rqisv UREC_HELPY : 338- 344: ifsdy Akt-Gdg-L vcalq XANA_XANCP : 24- 31: lnedl ArriGva-L aaqld XANA_XANCP : 174- 181: klvvn AgngGag-L ivdll XANA_XANCP : 174- 181: klvvn Agn-GgagL ivdll XANA_XANCP : 292- 298: emved Ag--GipvL cksgh YA81_SCHPO : 145- 152: gvffe AnghGti-L vshaa YRP8_METVA : 44- 48: indfk Ak--Gv--L seedv M 13: 10.5102 49( 29) N-x(3,5)-A-x(1,3)-V Occurences: 49(29) ALGC_PSEAE : 221- 229: pgkpe NlkdliAk--V kaena CPSG_ECOLI : 150- 156: ryqqi Nlrd--Ay--V dhlfg CPSG_ECOLI : 176- 185: lklvi NsgngaAgp-V vdaie CPSG_ECOLI : 176- 185: lklvi Nsgng-AagpV vdaie CPSG_ECOLI : 176- 186: lklvi NsgngaAgpvV daiea CPSG_ECOLI : 380- 387: asgei Nskl--Aqp-V eainr CPSG_SALCH : 176- 185: lklvv NsgngaAgp-V idaie CPSG_SALCH : 176- 185: lklvv Nsgng-AagpV idaie CPSG_SALTY : 176- 185: lklvf NagngaAgp-V idaie CPSG_SALTY : 176- 185: lklvf Nagng-AagpV idaie EXOC_AZOBR : 154- 162: lrnvy NpgdmaAa--V rlllh EXOC_AZOBR : 154- 162: lrnvy Npgdm-Aaa-V rlllh EXOC_AZOBR : 409- 417: ptvek NlvdlkAa--V aehgc MRSA_ECOLI : 209- 217: igcep NgvninAe--V gatdv MRSA_ECOLI : 214- 222: ngvni Naevg-Atd-V ralqa MRSA_HAEIN : 214- 222: nglni Nekcg-Atd-V talqa MRSA_HAEIN : 383- 393: fagge NplesdAvksV aaeve PCM1_SCHPO : 235- 243: asell Nngcg-Adf-V ktkqs PCM1_SCHPO : 236- 243: selln Ngcg--Adf-V ktkqs PCM1_YEAST : 267- 275: vpell Nfecg-Ady-V ktnqr PGM1_YEAST : 138- 146: kynlp Nggp--ApesV tnaiw PGM1_YEAST : 268- 276: lhpdp Nlty--ArtlV drvdr PGM1_YEAST : 535- 542: tdkke Nygqt-Ad--V flkpv PGM2_YEAST : 137- 145: kynls Nggp--ApesV tnaiw PGM2_YEAST : 267- 275: mhpdp Nlty--AsslV krvdr PGMU_ACEXY : 338- 348: eylfn NrenwnAsagV gktvv PGMU_ACEXY : 341- 348: fnnre Nwnas-Ag--V gktvv PGMU_AGRTU : 350- 357: wkffg Nlmd--Agk-V ticge PGMU_ECOLI : 18- 28: qsdli NvaqltAqyyV lkpea PGMU_ECOLI : 161- 169: kynpp Nggp--AdtnV tkvve PGMU_HUMAN : 264- 272: hhpdp Nltya-Adl-V etmks PGMU_HUMAN : 264- 272: hhpdp Nlty--AadlV etmks PGMU_NEIGO : 171- 180: lkrpi Niaid-AgngV ggafa PGMU_NEIGO : 270- 277: aqdvl Nrnpg-Ak--V ifdvk PGMU_NEIME : 171- 180: lkrpm Niaid-AgngV ggafa PGMU_NEIME : 272- 281: dvlnr Npgak-AifdV estrl PGMU_RABIT : 264- 272: hhpdp Nltya-Adl-V etmks PGMU_RABIT : 264- 272: hhpdp Nlty--AadlV etmks PGMU_RAT : 264- 272: hhpdp Nltya-Adl-V etmks PGMU_RAT : 264- 272: hhpdp Nlty--AadlV etmks PGMV_RABIT : 268- 276: hhpdp Nltya-Adl-V etmks PGMV_RABIT : 268- 276: hhpdp Nlty--AadlV etmks RFBB_VIBCH : 65- 74: kqala Nglmd-AginV idigv RFBB_VIBCH : 179- 188: mklvi NsgngaAgh-V idele RFBB_VIBCH : 179- 188: mklvi Nsgng-AaghV idele RFBK_SALCH : 17- 27: nksgi NfgtsgArglV tdftp RFBK_SALTY : 365- 372: lyksr Ntsis-Al--V nelpt RFBK_SALTY : 455- 464: cyaea Nllnr-AqdlV nttla RFK7_ECOLI : 148- 154: ryqqi Nlrd--Ay--V dhlfg RFK7_ECOLI : 174- 183: lklvi NsgngaAgp-V vdaie RFK7_ECOLI : 174- 183: lklvi Nsgng-AagpV vdaie RFK7_ECOLI : 174- 184: lklvi NsgngaAgpvV daiea RFK7_ECOLI : 377- 384: asgei Nskl--Ahp-V eainr RFK9_ECOLI : 177- 186: lklvv NsgngaAgh-V ideve RFK9_ECOLI : 177- 186: lklvv Nsgng-AaghV ideve UREC_HELPY : 275- 283: yqksk NalssqAi--V atnms XANA_XANCP : 173- 183: lklvv NagnggAgliV dllap XANA_XANCP : 217- 225: pllqe Nrdat-Aka-V kehga XANA_XANCP : 372- 382: csgei NfkvddAkaaV arvma YA81_SCHPO : 21- 29: npell Nnscg-Adf-V rtqqk YA81_SCHPO : 22- 29: pelln Nscg--Adf-V rtqqk YRP8_METVA : 40- 47: fwrki Ndfk--Akg-V lseed N 14: 10.5102 67( 29) F-x(0,2)-D-x(0,2)-G Occurences: 67(29) ALGC_PSEAE : 240- 242: dlgla F--D--G dgdrv ALGC_PSEAE : 240- 244: dlgla FdgD--G drvgv ALGC_PSEAE : 240- 244: dlgla F--DgdG drvgv ALGC_PSEAE : 336- 341: fkerw FgfDd-G iysaa ALGC_PSEAE : 338- 341: erwfg Fd-D--G iysaa ALGC_PSEAE : 338- 341: erwfg F--Dd-G iysaa CPSG_ECOLI : 244- 246: dmgia F--D--G dfdrc CPSG_ECOLI : 252- 258: dfdrc FlfDekG qfieg CPSG_ECOLI : 254- 258: drcfl F--DekG qfieg CPSG_SALCH : 244- 246: dmgia F--D--G dfdrc CPSG_SALCH : 252- 258: dfdrc FlfDekG qfieg CPSG_SALCH : 254- 258: drcfl F--DekG qfieg CPSG_SALTY : 244- 246: dmgia F--D--G dfdrc CPSG_SALTY : 252- 258: dfdrc FlfDekG qfieg CPSG_SALTY : 254- 258: drcfl F--DekG qfieg EXOC_AZOBR : 428- 430: digig F--D--G dgdri EXOC_AZOBR : 428- 432: digig FdgD--G driga EXOC_AZOBR : 428- 432: digig F--DgdG driga MRSA_ECOLI : 7- 11: snrky FgtD--G irgrv MRSA_ECOLI : 106- 110: ashnp Fy-Dn-G ikffs MRSA_ECOLI : 114- 118: ngikf FsiD--G tklpd MRSA_ECOLI : 240- 242: dlgia F--D--G dgdrv MRSA_ECOLI : 240- 244: dlgia FdgD--G drvim MRSA_ECOLI : 240- 244: dlgia F--DgdG drvim MRSA_HAEIN : 7- 11: anrky FgtD--G vrgkv PCM1_SCHPO : 353- 356: kaake F--Di-G vyfea PCM1_YEAST : 297- 299: slycs F--D--G dadrv PGM1_YEAST : 239- 244: ygkai Fv-DefG lpaee PGM2_YEAST : 238- 243: ygkai Fv-DefG lpade PGMU_ACEXY : 379- 382: vgfkw Fv-D--G lyngt PGMU_AGRTU : 192- 195: lmeel F--Df-G airsl PGMU_ECOLI : 376- 379: vgfkw Fv-D--G lfdgs PGMU_ECOLI : 381- 383: fvdgl F--D--G sfgfg PGMU_ECOLI : 400- 402: asflr F--D--G tpwst PGMU_HUMAN : 286- 288: dfgaa F--D--G dgdrn PGMU_HUMAN : 286- 290: dfgaa FdgD--G drnmi PGMU_HUMAN : 286- 290: dfgaa F--DgdG drnmi PGMU_HUMAN : 493- 496: glrli Ft-D--G srivf PGMU_NEIGO : 238- 240: eigla F--D--G dadrl PGMU_NEIGO : 334- 339: fkerw FgfDd-G lyaga PGMU_NEIGO : 336- 339: erwfg Fd-D--G lyaga PGMU_NEIGO : 336- 339: erwfg F--Dd-G lyaga PGMU_NEIGO : 411- 414: glrve Fp-D--G fglmr PGMU_NEIGO : 411- 416: glrve Fp-DgfG lmras PGMU_NEIME : 67- 71: hirrg Ft-Ds-G invln PGMU_NEIME : 200- 205: evtel Fc-DvdG tfpnh PGMU_NEIME : 238- 240: eigla F--D--G dadrl PGMU_NEIME : 334- 339: fkerw FgfDd-G lyaga PGMU_NEIME : 336- 339: erwfg Fd-D--G lyaga PGMU_NEIME : 336- 339: erwfg F--Dd-G lyaga PGMU_NEIME : 411- 414: glrve Fp-D--G fglmr PGMU_NEIME : 411- 416: glrve Fp-DgfG lmras PGMU_RABIT : 286- 288: dfgaa F--D--G dgdrn PGMU_RABIT : 286- 290: dfgaa FdgD--G drnmi PGMU_RABIT : 286- 290: dfgaa F--DgdG drnmi PGMU_RABIT : 493- 496: glrli Fa-D--G sriif PGMU_RAT : 286- 288: dfgaa F--D--G dgdrn PGMU_RAT : 286- 290: dfgaa FdgD--G drnmi PGMU_RAT : 286- 290: dfgaa F--DgdG drnmi PGMU_RAT : 493- 496: glrli Fa-D--G sriif PGMV_RABIT : 290- 292: dfgaa F--D--G dgdrn PGMV_RABIT : 290- 294: dfgaa FdgD--G drnmi PGMV_RABIT : 290- 294: dfgaa F--DgdG drnmi PGMV_RABIT : 497- 500: glrli Fa-D--G sriif RFBB_VIBCH : 247- 249: dmgia F--D--G dfdrc RFBB_VIBCH : 255- 261: dfdrc FlfDenG dfieg RFBB_VIBCH : 257- 261: drcfl F--DenG dfieg RFBB_VIBCH : 338- 342: sahhy Fr-Df-G ycdsg RFBK_SALCH : 115- 119: gship F--DrnG lkfyr RFBK_SALCH : 242- 246: qldai FstD--G dgdrp RFBK_SALCH : 242- 248: qldai FstDgdG drpli RFBK_SALTY : 242- 246: dldai FstD--G dgdrp RFBK_SALTY : 242- 248: dldai FstDgdG drpli RFK7_ECOLI : 242- 244: dmgia F--D--G dfdrc RFK7_ECOLI : 250- 256: dfdrc FlfDekG qfieg RFK7_ECOLI : 252- 256: drcfl F--DekG qfieg RFK7_ECOLI : 394- 399: rveqh FsrDa-G ggshr RFK7_ECOLI : 394- 400: rveqh FsrDagG gshrw RFK9_ECOLI : 245- 247: dmgia F--D--G dfdrc UREC_HELPY : 4- 8: mki FgtD--G vrgka UREC_HELPY : 103- 107: ashnp Fe-Dn-G ikffn UREC_HELPY : 130- 134: aieei Fh-De-G llhss UREC_HELPY : 239- 243: radlg FafD--G dadrl UREC_HELPY : 241- 243: dlgfa F--D--G dadrl XANA_XANCP : 244- 250: dfdrc FffDhtG rfieg XANA_XANCP : 245- 250: fdrcf Ff-DhtG rfieg XANA_XANCP : 246- 250: drcff F--DhtG rfieg YA81_SCHPO : 50- 52: arcas F--D--G dadri YRP8_METVA : 9- 12: gtkdn F--Dl-G ivlta O 15: 10.5102 70( 29) G-x(1,3)-D-x(1,3)-L Occurences: 70(29) ALGC_PSEAE : 53- 58: pcvav Gr--Dgr-L sgpel CPSG_ECOLI : 44- 49: ktivl Gg--Dvr-L tsetl CPSG_ECOLI : 66- 70: glqda Gv--Dv--L digms CPSG_ECOLI : 122- 129: isgdt Glr-DvqrL aeand CPSG_ECOLI : 246- 253: giafd Gdf-DrcfL fdekg CPSG_SALCH : 44- 49: ktivl Gg--Dvr-L tseal CPSG_SALCH : 66- 70: glqda Gv--Dv--L digms CPSG_SALCH : 122- 129: isgdt Glr-DvqrL aeagd CPSG_SALCH : 246- 253: giafd Gdf-DrcfL fdekg CPSG_SALTY : 44- 49: ktvvl Gg--Dvr-L tseal CPSG_SALTY : 66- 70: glqda Gv--Dv--L digms CPSG_SALTY : 122- 129: isgdt Glr-DvqrL aeagd CPSG_SALTY : 246- 253: giafd Gdf-DrcfL fdekg EXOC_AZOBR : 241- 246: ktvcv Gy--Dgr-L sspel EXOC_AZOBR : 436- 441: dgdri Gai-Dh--L grvvw EXOC_AZOBR : 525- 530: adkwy Gfd-Da--L ycavr EXOC_AZOBR : 525- 530: adkwy Gf--Dda-L ycavr MRSA_ECOLI : 218- 225: inaev Gat-DvraL qarvl MRSA_ECOLI : 381- 386: vryta Gsg-Dp--L ehesv MRSA_HAEIN : 205- 211: eviei Gt--DpngL ninek MRSA_HAEIN : 218- 225: inekc Gat-DvtaL qakvv PCM1_SCHPO : 213- 219: lktva GlvkDs--L sielv PCM1_SCHPO : 268- 273: yasid Gda-Dr--L ifyyi PCM1_YEAST : 502- 509: llnpv Glq-DkidL vvaky PGM1_YEAST : 262- 269: lpdfg GlhpDpn-L tyart PGM1_YEAST : 537- 544: kkeny GqtaDvf-L kpvin PGM2_YEAST : 243- 250: fvdef GlpaDev-L qnwhp PGM2_YEAST : 261- 268: spdfg GmhpDpn-L tyass PGM2_YEAST : 489- 497: ytdld GsvsDhqgL yvkls PGMU_ACEXY : 9- 17: ispfa GkpvDpdrL vnida PGMU_ACEXY : 85- 91: gplfi Gi--DthaL srpal PGMU_ACEXY : 234- 238: sgvsi Gi--Dp--L ggaav PGMU_AGRTU : 246- 253: lpdfg GhhpDpn-L vhake PGMU_ECOLI : 84- 90: gpcyv Gk--DthaL sepaf PGMU_ECOLI : 232- 236: agltl Gv--Dp--L ggsgi PGMU_HUMAN : 258- 265: ledfg GhhpDpn-L tyaad PGMU_HUMAN : 362- 370: gwkff GnlmDaskL slcge PGMU_NEIGO : 49- 54: arial Gr--Dgr-L sgpel PGMU_NEIGO : 117- 121: fkmml Gg--Dt--L ageai PGMU_NEIGO : 240- 245: glafd Gda-Dr--L gvvtk PGMU_NEIGO : 335- 340: kerwf Gfd-Dg--L yagar PGMU_NEIGO : 335- 340: kerwf Gf--Ddg-L yagar PGMU_NEIME : 49- 54: trial Gr--Dgr-L sgpel PGMU_NEIME : 117- 121: fkmml Gg--Dt--L ageai PGMU_NEIME : 240- 245: glafd Gda-Dr--L gvvtk PGMU_NEIME : 335- 340: kerwf Gfd-Dg--L yagar PGMU_NEIME : 335- 340: kerwf Gf--Ddg-L yagar PGMU_RABIT : 258- 265: ledfg GhhpDpn-L tyaad PGMU_RABIT : 362- 370: gwkff GnlmDaskL slcge PGMU_RAT : 258- 265: ledfg GhhpDpn-L tyaad PGMU_RAT : 362- 370: gwkff GnlmDaskL slcge PGMV_RABIT : 262- 269: ledfg GhhpDpn-L tyaad PGMV_RABIT : 366- 374: gwkff GnlmDaskL slcge RFBB_VIBCH : 49- 54: ktvvv Gg--Dvr-L tseal RFBB_VIBCH : 186- 192: gngaa GhviDe--L ekrfi RFBB_VIBCH : 249- 256: giafd Gdf-DrcfL fdeng RFBK_SALCH : 246- 252: ifstd Gdg-Drp-L iadey RFBK_SALTY : 246- 252: ifstd Gdg-Drp-L iadea RFK7_ECOLI : 42- 47: ktivl Gg--Dvr-L tsetl RFK7_ECOLI : 64- 68: glqda Gv--Dv--L digms RFK7_ECOLI : 120- 127: isgdt Glr-DvqrL aeand RFK7_ECOLI : 244- 251: giafd Gdf-DrcfL fdekg RFK9_ECOLI : 44- 49: gkivv Gg--Dvr-L tsesl RFK9_ECOLI : 66- 70: glmda Gt--Dv--L digls RFK9_ECOLI : 122- 129: isgdt Glr-DiqrL aeenq RFK9_ECOLI : 247- 254: giafd Gdf-DrcfL fddea UREC_HELPY : 199- 203: vfsel Ga--Dv--L vinde UREC_HELPY : 243- 248: gfafd Gda-Dr--L vvvdn XANA_XANCP : 13- 19: aydir GrvpDe--L nedla XANA_XANCP : 43- 48: gpvvl Gh--Dvr-L aspal XANA_XANCP : 180- 186: gngga GlivDl--L aphlp YA81_SCHPO : 287- 294: eassr GeseDla-L rivel YRP8_METVA : 4- 11: myf Gtk-DnfdL givlt P 16: 8.3401 90( 29) A-S Occurences: 90(29) ALGC_PSEAE : 10- 11: aptlp AS ifray ALGC_PSEAE : 143- 144: ekndl AS gvgsv ALGC_PSEAE : 421- 422: wglvr AS nttpv CPSG_ECOLI : 97- 98: gievt AS hnpmd CPSG_ECOLI : 375- 376: maafp AS geins CPSG_SALCH : 97- 98: gievt AS hnpmd CPSG_SALCH : 375- 376: maafp AS geins CPSG_SALTY : 97- 98: gievt AS hnpmd CPSG_SALTY : 375- 376: maafp AS geins EXOC_AZOBR : 325- 326: digai AS kadyv EXOC_AZOBR : 370- 371: dagng AS gedpa EXOC_AZOBR : 473- 474: iadvk AS qtlfd EXOC_AZOBR : 612- 613: wwllr AS ntqdv EXOC_AZOBR : 646- 647: hwkpp AS rpflr MRSA_ECOLI : 101- 102: givis AS hnpfy MRSA_ECOLI : 148- 149: aelgk AS rivda MRSA_HAEIN : 38- 39: agkvl AS qgskm MRSA_HAEIN : 101- 102: givis AS hnpyy MRSA_HAEIN : 148- 149: aelgk AS rinda MRSA_HAEIN : 344- 345: gdgiv AS lavla MRSA_HAEIN : 363- 364: slnel AS avklf PCM1_SCHPO : 18- 19: gfrtk AS dleaa PCM1_SCHPO : 50- 51: gvmit AS hnpve PCM1_SCHPO : 133- 134: ldems AS yidyg PCM1_SCHPO : 159- 160: nksta AS fleeg PCM1_SCHPO : 230- 231: ntdvr AS ellnn PCM1_SCHPO : 264- 265: pnqly AS idgda PCM1_SCHPO : 324- 325: ayang AS teylq PCM1_SCHPO : 427- 428: alhwd AS awsnt PCM1_SCHPO : 487- 488: rsfvr AS gtedv PCM1_SCHPO : 500- 501: rvyae AS tkqaa PCM1_YEAST : 66- 67: gvmit AS hnpyq PCM1_YEAST : 101- 102: qlana AS fatnf PCM1_YEAST : 155- 156: ltssm AS vfhaq PCM1_YEAST : 242- 243: lkkll AS edwdv PCM1_YEAST : 523- 524: rsfvr AS gteda PCM1_YEAST : 555- 556: vehvk AS a PGM1_YEAST : 99- 100: lstpa AS hiirt PGM1_YEAST : 119- 120: giilt AS hnpgg PGM1_YEAST : 153- 154: naiwe AS kklth PGM1_YEAST : 289- 290: iafga AS dgdgd PGM1_YEAST : 417- 418: npeke AS iktiq PGM2_YEAST : 99- 100: lstpa AS himrt PGM2_YEAST : 118- 119: giilt AS hnpgg PGM2_YEAST : 271- 272: pnlty AS slvkr PGM2_YEAST : 288- 289: iefga AS dgdgd PGM2_YEAST : 416- 417: hpene AS iktiq PGMU_ACEXY : 344- 345: renwn AS agvgk PGMU_ACEXY : 398- 399: eesag AS flrra PGMU_AGRTU : 94- 95: lstpa AS nvirk PGMU_AGRTU : 111- 112: givls AS hnpgg PGMU_AGRTU : 274- 275: pdfga AS dgdgd PGMU_ECOLI : 198- 199: ldeam AS ghvke PGMU_ECOLI : 395- 396: eesag AS flrfd PGMU_ECOLI : 470- 471: pemvs AS tlagd PGMU_ECOLI : 490- 491: apgng AS igglk PGMU_HUMAN : 115- 116: giilt AS hnpgg PGMU_HUMAN : 344- 345: aldrv AS atkia PGMU_HUMAN : 367- 368: gnlmd AS klslc PGMU_NEIGO : 2- 3: m AS itrdi PGMU_NEIGO : 352- 353: leils AS dnpse PGMU_NEIGO : 420- 421: fglmr AS nttpi PGMU_NEIME : 2- 3: m AS iardi PGMU_NEIME : 352- 353: leils AS dnpte PGMU_NEIME : 420- 421: fglmr AS nttpi PGMU_RABIT : 115- 116: giilt AS hnpgg PGMU_RABIT : 367- 368: gnlmd AS klslc PGMU_RAT : 115- 116: giilt AS hnpgg PGMU_RAT : 350- 351: natki AS yetpt PGMU_RAT : 367- 368: gnlmd AS klslc PGMV_RABIT : 119- 120: giilt AS hnpgg PGMV_RABIT : 371- 372: gnlmd AS klslc RFBB_VIBCH : 102- 103: gievt AS hnpmd RFBK_SALCH : 142- 143: iihvd AS fmqpk RFBK_SALTY : 441- 442: ivhlr AS gnape RFK7_ECOLI : 95- 96: gievt AS hnpmd RFK7_ECOLI : 372- 373: maafp AS geins RFK7_ECOLI : 419- 420: aaltc AS sntep RFK9_ECOLI : 97- 98: gievt AS hnpmn RFK9_ECOLI : 259- 260: lfdde AS fiegy RFK9_ECOLI : 376- 377: qaafp AS geinr UREC_HELPY : 98- 99: gimis AS hnpfe XANA_XANCP : 49- 50: hdvrl AS palqe XANA_XANCP : 63- 64: saglr AS grevi XANA_XANCP : 96- 97: gvmvt AS hnpmd YA81_SCHPO : 48- 49: kharc AS fdgda YA81_SCHPO : 107- 108: ayang AS taffq YA81_SCHPO : 283- 284: rvyae AS srges YRP8_METVA : 17- 18: givlt AS hnpke YRP8_METVA : 128- 129: hkgks AS tsv Q 17: 8.3401 66( 29) G-x-S Occurences: 66(29) ALGC_PSEAE : 98- 100: anvle GkS gvmlt ALGC_PSEAE : 195- 197: lieal GcS viply ALGC_PSEAE : 306- 308: vmwkt GhS likkk CPSG_ECOLI : 73- 75: dvldi GmS gteei CPSG_ECOLI : 409- 411: vdrtd GiS mtfad CPSG_SALCH : 73- 75: dvldi GmS gteei CPSG_SALCH : 359- 361: lvclk GqS lgelv CPSG_SALCH : 409- 411: vdrtd GlS msfad CPSG_SALTY : 73- 75: dvldi GmS gteei CPSG_SALTY : 409- 411: vdrtd GlS msfad EXOC_AZOBR : 335- 337: yvsge GsS eqldi EXOC_AZOBR : 369- 371: wdagn GaS gedpa EXOC_AZOBR : 494- 496: lmwkt GhS llkak EXOC_AZOBR : 581- 583: vqeve GrS srlma MRSA_ECOLI : 70- 72: glaaa GlS alftg MRSA_HAEIN : 70- 72: glaaa GlS aaftg PCM1_SCHPO : 323- 325: tayan GaS teylq PCM1_SCHPO : 481- 483: akyek GrS fvras PCM1_YEAST : 284- 286: qrlpk GlS pssfd PCM1_YEAST : 356- 358: tayan GsS tayik PCM1_YEAST : 517- 519: akypm GrS fvras PGM1_YEAST : 19- 21: kdqkp GtS glrkk PGM1_YEAST : 310- 312: afvsp GdS vaiia PGM1_YEAST : 516- 518: rlsgt GsS gatir PGM2_YEAST : 19- 21: edqkp GtS glrkk PGM2_YEAST : 302- 304: miygy GpS fvspg PGM2_YEAST : 309- 311: sfvsp GdS vaiia PGM2_YEAST : 515- 517: rlsgt GsS gatir PGMU_ACEXY : 44- 46: qrvaf GtS ghrgs PGMU_ACEXY : 50- 52: tsghr GsS lttsf PGMU_ACEXY : 230- 232: vires GvS igidp PGMU_ACEXY : 397- 399: geesa GaS flrra PGMU_AGRTU : 16- 18: qdqkp GtS glrkk PGMU_AGRTU : 313- 315: pgyaa GiS giars PGMU_AGRTU : 440- 442: latlp GtS ygnlk PGMU_AGRTU : 476- 478: rilfe GgS rivlr PGMU_ECOLI : 43- 45: havkf GtS ghrgs PGMU_ECOLI : 237- 239: gvdpl GgS gieyw PGMU_ECOLI : 394- 396: geesa GaS flrfd PGMU_ECOLI : 489- 491: aapgn GaS igglk PGMU_HUMAN : 17- 19: qdqkp GtS glrkr PGMU_NEIGO : 71- 73: gltds GiS vlnvg PGMU_NEIGO : 94- 96: avnec GgS gvmit PGMU_NEIGO : 304- 306: imekt GhS fiksa PGMU_NEIME : 94- 96: avnec GgS gvmit PGMU_NEIME : 304- 306: imekt GhS fiksa PGMU_RABIT : 17- 19: pdqkp GtS glrkr PGMU_RAT : 17- 19: pdqkp GtS glrkr PGMV_RABIT : 21- 23: hdqkp GtS glrkk PGMV_RABIT : 57- 59: lkdrq GsS lvvgg RFBB_VIBCH : 29- 31: iayri GrS ygqfl RFBB_VIBCH : 413- 415: fsaid GiS lefeg RFBK_SALCH : 19- 21: sginf GtS gargl RFBK_SALTY : 19- 21: sgivf GtS gargl RFBK_SALTY : 208- 210: evvsl GrS dnfvp RFK7_ECOLI : 71- 73: dvldi GmS gteei RFK7_ECOLI : 400- 402: srdag GgS hrwhq RFK9_ECOLI : 73- 75: dvldi GlS gteei RFK9_ECOLI : 410- 412: idttd GiS ieype UREC_HELPY : 143- 145: ssykv GeS vgsak XANA_XANCP : 351- 353: lvsqs GrS ladlv XANA_XANCP : 401- 403: ldytd GiS adfgq YA81_SCHPO : 38- 40: qkppn GiS apkha YA81_SCHPO : 106- 108: tayan GaS taffq YA81_SCHPO : 287- 289: eassr GeS edlal YRP8_METVA : 125- 127: psshk GkS astsv R 18: 8.3401 97( 29) G-x(2)-A Occurences: 97(29) ALGC_PSEAE : 184- 187: gngva GviA pqlie CPSG_ECOLI : 178- 181: lvins GngA agpvv CPSG_ECOLI : 268- 271: gyyiv GllA eafle CPSG_SALCH : 178- 181: lvvns GngA agpvi CPSG_SALCH : 268- 271: gyyiv GllA eafle CPSG_SALTY : 178- 181: lvfna GngA agpvi CPSG_SALTY : 268- 271: gyyiv GllA eafle EXOC_AZOBR : 8- 11: pqgha GpgA hrpag EXOC_AZOBR : 40- 43: kqmgg GivA acgig EXOC_AZOBR : 97- 100: rrhar GreA aarrg EXOC_AZOBR : 156- 159: nvynp GdmA aavrl EXOC_AZOBR : 229- 232: rlrhr GrpA avrkt EXOC_AZOBR : 258- 261: aamvd GlvA cglhv EXOC_AZOBR : 322- 325: qildi GaiA skady EXOC_AZOBR : 367- 370: iawda GngA sgedp MRSA_ECOLI : 30- 33: fvlkl GwaA gkvla MRSA_ECOLI : 65- 68: salea GlaA aglsa MRSA_ECOLI : 70- 73: glaaa GlsA lftgp MRSA_ECOLI : 341- 344: tttgd GivA glqvl MRSA_HAEIN : 30- 33: falkl GwaA gkvla MRSA_HAEIN : 65- 68: salea GlaA aglsa MRSA_HAEIN : 70- 73: glaaa GlsA aftgp MRSA_HAEIN : 341- 344: nttgd GivA slavl PCM1_SCHPO : 29- 32: avyss GvaA alrsm PCM1_SCHPO : 68- 71: idadg GmlA mewed PCM1_SCHPO : 237- 240: ellnn GcgA dfvkt PCM1_YEAST : 45- 48: vmfst GilA vlrsl PCM1_YEAST : 187- 190: rrkle GdtA pvate PGM1_YEAST : 139- 142: ynlpn GgpA pesvt PGM1_YEAST : 244- 247: fvdef GlpA eevlq PGM1_YEAST : 394- 397: irekd GlwA iiawl PGM1_YEAST : 537- 540: kkeny GqtA dvflk PGM2_YEAST : 138- 141: ynlsn GgpA pesvt PGM2_YEAST : 243- 246: fvdef GlpA devlq PGM2_YEAST : 393- 396: vrekd GvwA imawl PGMU_ACEXY : 164- 167: ynpph GgpA dtdit PGMU_ACEXY : 239- 242: gidpl GgaA vdywq PGMU_ACEXY : 254- 257: iidky GinA tivsk PGMU_ACEXY : 418- 421: dgiil GllA aeita PGMU_ACEXY : 490- 493: ltnap GngA aiggl PGMU_ACEXY : 505- 508: vsakd GwfA arpsg PGMU_AGRTU : 131- 134: ynign GgpA pekit PGMU_AGRTU : 217- 220: msavt GpyA veile PGMU_AGRTU : 309- 312: aklap GyaA gisgi PGMU_AGRTU : 377- 380: vrekd GlwA vlywl PGMU_AGRTU : 528- 531: adtia GikA htads PGMU_ECOLI : 8- 11: ihnra GqpA qqsdl PGMU_ECOLI : 49- 52: tsghr GsaA rhsfn PGMU_ECOLI : 135- 138: hnkkg GplA dgivi PGMU_ECOLI : 162- 165: ynppn GgpA dtnvt PGMU_ECOLI : 289- 292: ecama GllA lrdkf PGMU_ECOLI : 487- 490: ltaap GngA siggl PGMU_ECOLI : 502- 505: vmtdn GwfA arpsg PGMU_HUMAN : 135- 138: fnisn GgpA peait PGMU_HUMAN : 241- 244: lceel GapA nsavn PGMU_HUMAN : 390- 393: irekd GlwA vlawl PGMU_HUMAN : 553- 556: lqert GrtA ptvit PGMU_NEIGO : 137- 140: ivekd GfvA adkqg PGMU_NEIGO : 182- 185: gngvg GafA gklyk PGMU_NEIGO : 295- 298: wikeh GgeA imekt PGMU_NEIGO : 339- 342: fgfdd GlyA garll PGMU_NEIME : 78- 81: nvlnv GmvA tpmly PGMU_NEIME : 182- 185: gngvg GafA gklyk PGMU_NEIME : 274- 277: lnrnp GakA ifdve PGMU_NEIME : 295- 298: wikeh GgkA imekt PGMU_NEIME : 339- 342: fgfdd GlyA garll PGMU_RABIT : 135- 138: fnisn GgpA peait PGMU_RABIT : 241- 244: lceel GapA nsavn PGMU_RABIT : 390- 393: irekd GlwA vlawl PGMU_RABIT : 553- 556: lqert GrtA ptvit PGMU_RAT : 135- 138: fnisn GgpA peait PGMU_RAT : 241- 244: lceel GapA nsavn PGMU_RAT : 390- 393: irekd GlwA vlawl PGMU_RAT : 553- 556: lqert GrtA ptvit PGMV_RABIT : 139- 142: fnisn GgpA peait PGMV_RABIT : 245- 248: lceel GapA nsavn PGMV_RABIT : 394- 397: irekd GlwA vlawl PGMV_RABIT : 557- 560: lqert GrtA ptvit RFBB_VIBCH : 181- 184: lvins GngA aghvi RFBB_VIBCH : 271- 274: gyyiv GllA eaflq RFBK_SALCH : 324- 327: yncia GfeA nggfl RFBK_SALTY : 324- 327: ysriv GfeA nggfl RFK7_ECOLI : 176- 179: lvins GngA agpvv RFK7_ECOLI : 266- 269: gyyiv GllA eafle RFK9_ECOLI : 179- 182: lvvns GngA aghvi RFK9_ECOLI : 269- 272: gyyiv GllA eaflq RFK9_ECOLI : 385- 388: inrkl GnaA eaiar UREC_HELPY : 26- 29: fvmrl GiaA glyfk UREC_HELPY : 391- 394: leslk GynA llkel XANA_XANCP : 60- 63: ealsa GlrA sgrev XANA_XANCP : 121- 124: issdt GlfA irdtv XANA_XANCP : 260- 263: gyylv GllA qaila XANA_XANCP : 401- 404: ldytd GisA dfgqw XANA_XANCP : 430- 433: nvetr GdaA lletr YA81_SCHPO : 38- 41: qkppn GisA pkhar YA81_SCHPO : 263- 266: vakyt GgrA fvrss YRP8_METVA : 125- 128: psshk GksA stsv S 19: 8.3401 80( 29) F-x(5)-G Occurences: 80(29) ALGC_PSEAE : 116- 122: pdyng FkivvaG etlan ALGC_PSEAE : 331- 337: sghvf FkerwfG fddgi CPSG_ECOLI : 82- 88: teeiy FatfhlG vdggi CPSG_ECOLI : 85- 91: iyfat FhlgvdG gievt CPSG_ECOLI : 252- 258: dfdrc FlfdekG qfieg CPSG_ECOLI : 274- 280: llaea FleknpG akiih CPSG_ECOLI : 338- 344: hyfrd FaycdsG mipwl CPSG_SALCH : 82- 88: teeiy FatfhlG vdggi CPSG_SALCH : 85- 91: iyfat FhlgvdG gievt CPSG_SALCH : 252- 258: dfdrc FlfdekG qfieg CPSG_SALCH : 274- 280: llaea FlekhpG akiih CPSG_SALCH : 338- 344: hyfrd FaycdsG mipwl CPSG_SALTY : 82- 88: teeiy FatfhlG vdggi CPSG_SALTY : 85- 91: iyfat FhlgvdG gievt CPSG_SALTY : 252- 258: dfdrc FlfdekG qfieg CPSG_SALTY : 274- 280: llaea FlekhpG akiih CPSG_SALTY : 338- 344: hyfrd FaycdsG mipwl EXOC_AZOBR : 519- 525: sghif FadkwyG fddal MRSA_ECOLI : 301- 307: qlgip FarakvG dryvl MRSA_HAEIN : 301- 307: mlgvp FlranvG dryvl PCM1_SCHPO : 359- 365: digvy FeanghG tvlfs PCM1_YEAST : 23- 29: tknvq FsygtaG frtla PCM1_YEAST : 225- 231: svpkl FidtanG iggpq PCM1_YEAST : 306- 312: adrvv FyyvdsG skfhl PCM1_YEAST : 394- 400: digiy FeanghG tiifs PGM1_YEAST : 286- 292: rekia FgaasdG dgdrn PGM1_YEAST : 499- 505: enqgl FvkfsnG tkfvl PGM1_YEAST : 508- 514: sngtk FvlrlsG tgssg PGM2_YEAST : 165- 171: kiikd FpeldlG tigkn PGM2_YEAST : 285- 291: rekie FgaasdG dgdrn PGM2_YEAST : 507- 513: sngar FvlrlsG tgssg PGMU_ACEXY : 376- 382: evpvg FkwfvdG lyngt PGMU_ACEXY : 507- 513: akdgw FaarpsG tenvy PGMU_AGRTU : 78- 84: aaaag FgkvlvG qggil PGMU_AGRTU : 271- 277: pegpd FgaasdG dgdrn PGMU_ECOLI : 373- 379: evpvg FkwfvdG lfdgs PGMU_ECOLI : 504- 510: tdngw FaarpsG teday PGMU_HUMAN : 130- 136: dfgik FnisngG papea PGMU_HUMAN : 282- 288: sgehd FgaafdG dgdrn PGMU_HUMAN : 449- 455: lealm FdrsfvG kqfsa PGMU_HUMAN : 501- 507: gsriv FrlsgtG sagat PGMU_NEIGO : 112- 118: pdyng FkmmlgG dtlag PGMU_NEIGO : 329- 335: sghvf FkerwfG fddgl PGMU_NEIME : 112- 118: pdyng FkmmlgG dtlag PGMU_NEIME : 329- 335: sghif FkerwfG fddgl PGMU_RABIT : 130- 136: dfgik FnisngG papea PGMU_RABIT : 282- 288: sgehd FgaafdG dgdrn PGMU_RABIT : 449- 455: lealm FdrsfvG kqfsa PGMU_RABIT : 501- 507: gsrii FrlsgtG sagat PGMU_RAT : 130- 136: dfgik FnisngG papea PGMU_RAT : 282- 288: sgehd FgaafdG dgdrn PGMU_RAT : 501- 507: gsrii FrlsgtG sagat PGMV_RABIT : 134- 140: dfgik FnisngG papea PGMV_RABIT : 286- 292: sgehd FgaafdG dgdrn PGMV_RABIT : 453- 459: lealm FdrsfvG kqfsa PGMV_RABIT : 505- 511: gsrii FrlsgtG sagat RFBB_VIBCH : 87- 93: teeiy FatfylG vdggi RFBB_VIBCH : 90- 96: iyfat FylgvdG gievt RFBB_VIBCH : 255- 261: dfdrc FlfdenG dfieg RFBB_VIBCH : 277- 283: llaea FlqkeqG akiih RFBB_VIBCH : 341- 347: hyfrd FgycdsG mipwl RFBB_VIBCH : 375- 381: isakr FlfpcsG einfk RFBK_SALCH : 242- 248: qldai FstdgdG drpli RFBK_SALTY : 242- 248: dldai FstdgdG drpli RFK7_ECOLI : 80- 86: teeiy FatfhlG vdggi RFK7_ECOLI : 83- 89: iyfat FhlgvdG gievt RFK7_ECOLI : 250- 256: dfdrc FlfdekG qfieg RFK7_ECOLI : 272- 278: llaea FleknpG akiih RFK7_ECOLI : 335- 341: hyfrd FaycdtG mipwl RFK7_ECOLI : 394- 400: rveqh FsrdagG gshrw RFK9_ECOLI : 82- 88: teeiy FatfhlG vdggi RFK9_ECOLI : 85- 91: iyfat FhlgvdG gievt RFK9_ECOLI : 275- 281: llaea FlqkqpG akiih RFK9_ECOLI : 339- 345: hyfrd FaycdsG mipwl UREC_HELPY : 324- 330: lnkan FggeqsG hiifs XANA_XANCP : 232- 238: ehgad FgiawdG dfdrc XANA_XANCP : 244- 250: dfdrc FffdhtG rfieg XANA_XANCP : 330- 336: hyfre FayadsG mipwl YA81_SCHPO : 143- 149: dvgvf FeanghG tilvs YRP8_METVA : 119- 125: ayhwk FpsshkG ksast T 20: 8.3401 78( 29) A-x(3)-K Occurences: 78(29) ALGC_PSEAE : 169- 173: ddiam AkpmK vvvdc CPSG_ECOLI : 273- 277: gllae AfleK npgak CPSG_SALCH : 273- 277: gllae AfleK hpgak CPSG_SALTY : 273- 277: gllae AfleK hpgak EXOC_AZOBR : 131- 135: wnefr AldlK rvktl EXOC_AZOBR : 232- 236: hrgrp AavrK tvcvg EXOC_AZOBR : 323- 327: ildig AiasK adyvs EXOC_AZOBR : 456- 460: vaiya AdvlK shpga MRSA_ECOLI : 131- 135: eeaie AemeK eiscv MRSA_ECOLI : 143- 147: scvds AelgK asriv MRSA_ECOLI : 439- 443: fahri AdavK av MRSA_HAEIN : 116- 120: ikffs AkgtK lpdei MRSA_HAEIN : 143- 147: dcves AelgK asrin MRSA_HAEIN : 224- 228: atdvt AlqaK vvetk MRSA_HAEIN : 363- 367: slnel AsavK lfpqv MRSA_HAEIN : 395- 399: vksva AeveK rlegk MRSA_HAEIN : 438- 442: caeei AeavK kin PCM1_SCHPO : 121- 125: ssprl AellK vclde PCM1_SCHPO : 212- 216: plktv AglvK dslsi PCM1_SCHPO : 240- 244: nngcg AdfvK tkqsp PCM1_SCHPO : 252- 256: qsppl AlegK ikpnq PCM1_SCHPO : 473- 477: qekid AlvaK yekgr PCM1_SCHPO : 476- 480: idalv AkyeK grsfv PCM1_YEAST : 272- 276: nfecg AdyvK tnqrl PGM1_YEAST : 212- 216: iksfl AkqrK dkgwk PGM2_YEAST : 80- 84: aaiga AngiK klvig PGM2_YEAST : 405- 409: wlnil AiynK hhpen PGM2_YEAST : 456- 460: vdqlr AyvtK sgvvn PGMU_ACEXY : 70- 74: isqai AdyrK gagit PGMU_ACEXY : 201- 205: edalk ApttK rhdyi PGMU_ACEXY : 346- 350: nwnas AgvgK tvvss PGMU_ACEXY : 522- 526: vykiy AesfK saahl PGMU_ACEXY : 528- 532: esfks AahlK aiqte PGMU_ACEXY : 544- 548: qdais AlfaK aaqkn PGMU_AGRTU : 76- 80: kmaaa AgfgK vlvgq PGMU_AGRTU : 202- 206: irsli AggfK vvvds PGMU_AGRTU : 301- 305: slaii AanaK lapgy PGMU_ECOLI : 182- 186: anall AdglK gvkri PGMU_ECOLI : 222- 226: divdm AaiqK agltl PGMU_ECOLI : 292- 296: magll AlrdK fdlaf PGMU_ECOLI : 423- 427: aaeit AvtgK npqeh PGMU_ECOLI : 458- 462: tsaqk AalsK lspem PGMU_HUMAN : 141- 145: gpape AitdK ifqis PGMU_HUMAN : 344- 348: aldrv AsatK ialye PGMU_NEIGO : 33- 37: yfigr AiaaK aaekg PGMU_NEIGO : 131- 135: iqell AiveK dgfva PGMU_NEIGO : 183- 187: ngvgg AfagK lykgl PGMU_NEIGO : 288- 292: strll ApwiK ehgge PGMU_NEIGO : 298- 302: ehgge AimeK tghsf PGMU_NEIME : 33- 37: yligk AiaaK aaekg PGMU_NEIME : 139- 143: ekdgf AragK qgsvt PGMU_NEIME : 183- 187: ngvgg AfagK lykgl PGMU_NEIME : 288- 292: strlv ApwiK ehggk PGMU_NEIME : 298- 302: ehggk AimeK tghsf PGMU_RABIT : 141- 145: gpape AitdK ifqis PGMU_RABIT : 344- 348: aldrv AnatK ialye PGMU_RAT : 141- 145: gpape AitdK ifqis PGMU_RAT : 344- 348: aldrv AnatK iasye PGMV_RABIT : 145- 149: gpape AitdK ifqis PGMV_RABIT : 348- 352: aldrv AnatK ialye RFBB_VIBCH : 133- 137: lreiq AlaeK nefmd RFBB_VIBCH : 233- 237: cradt AnavK ehkad RFBB_VIBCH : 276- 280: gllae AflqK eqgak RFBK_SALCH : 75- 79: qacaa AlqeK giktv RFBK_SALCH : 310- 314: spyvi AafaK lsany RFBK_SALTY : 75- 79: qacaa AladK gvnci RFBK_SALTY : 469- 473: vnttl AnikK rcll RFK7_ECOLI : 271- 275: gllae AfleK npgak RFK9_ECOLI : 274- 278: gllae AflqK qpgak UREC_HELPY : 307- 311: elkhc AigdK fvsec UREC_HELPY : 423- 427: rille AkdeK llesk XANA_XANCP : 222- 226: nrdat AkavK ehgad XANA_XANCP : 265- 269: gllaq AilaK qpggk XANA_XANCP : 360- 364: adlve ArmqK fpcsg YA81_SCHPO : 110- 114: ngast AffqK tlkvp YA81_SCHPO : 156- 160: ilvsh AalsK iishe YA81_SCHPO : 256- 260: qekid AlvaK ytggr YRP8_METVA : 114- 118: idpsy AyhwK fpssh Number of patterns evaluated by Pratt:1185 Total running time: 6 seconds