------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 20 sequences from file PEPCASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 20 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 41 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename PEPCASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CAP1_FLAPR 967 CAP1_FLATR 967 CAP1_MESCR 966 CAP1_SACHY 966 CAP1_SORVU 960 CAP1_SOYBN 967 CAP2_FLATR 966 CAP2_MESCR 960 CAP2_SORVU 960 CAP3_SORVU 960 CAPP_ANANI 1053 CAPP_ANASP 982 CAPP_CORGL 918 CAPP_ECOLI 883 CAPP_HAEIN 879 CAPP_MAIZE 970 CAPP_MEDSA 966 CAPP_MYCLE 907 CAPP_SOLTU 965 CAPP_TOBAC 964 Pratt run started at Thu Feb 6 20:31:08 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 65.7208 25( 20) L-x(0,2)-F-H-G-R-G-G-x(2)-G-R-G-G-x-P-x(3)-A-x-L-x-Q-P 2: 62.5508 20( 20) L-R-A-I-P-W-x(3)-W-x-Q-x-R-x(2)-L-P-x-W-x-G-x-G-x-A 3: 62.5508 20( 20) F-H-G-R-G-G-x(2)-G-R-G-G-x-P-x(3)-A-x-L-x-Q-P 4: 61.5508 20( 20) F-H-G-R-G-G-x(2)-G-R-G-G-x-P-x(2,3)-A-x-L-x(1,2)-Q-P 5: 60.5508 20( 20) L-R-A-I-P-W-x(3)-W-x-Q-x-R-x(0,2)-L-x(0,2)-P-x-W-x-G-x-G-x-A 6: 58.3807 20( 20) R-A-I-P-W-x(3)-W-x-Q-x-R-x(2)-L-P-x-W-x-G-x-G-x-A 7: 57.3807 20( 20) H-G-R-G-G-x(2)-G-R-G-G-x-P-x(2,3)-A-x-L-x(1,2)-Q-P 8: 56.8807 25( 20) L-x(0,2)-F-H-G-R-G-G-x(2)-G-R-G-G-x-P-x(2,3)-A-x-L 9: 56.3807 20( 20) R-A-I-P-W-x(3)-W-x-Q-x-R-x(0,2)-L-x(0,2)-P-x-W-x-G-x-G-x-A 10: 54.2107 20( 20) A-I-P-W-x(3)-W-x-Q-x-R-x(2)-L-P-x-W-x-G-x-G-x-A 11: 54.2107 20( 20) G-R-G-G-x(2)-G-R-G-G-x-P-x(3)-A-x-L-x-Q-P 12: 53.2107 20( 20) G-R-G-G-x(2)-G-R-G-G-x-P-x(2,3)-A-x-L-x(1,2)-Q-P 13: 52.2107 20( 20) A-I-P-W-x(3)-W-x-Q-x-R-x(0,2)-L-x(0,2)-P-x-W-x-G-x-G-x-A 14: 50.0406 20( 20) I-P-W-x(3)-W-x-Q-x-R-x(2)-L-P-x-W-x-G-x-G-x-A 15: 50.0406 20( 20) Q-x-V-M-x-G-Y-S-D-S-x-K-D-x-G-x(5)-W 16: 49.0406 20( 20) R-G-G-x(2)-G-R-G-G-x-P-x(2,3)-A-x-L-x(1,2)-Q-P 17: 48.0406 20( 20) I-P-W-x(3)-W-x-Q-x-R-x(0,2)-L-x(0,2)-P-x-W-x-G-x-G-x-A 18: 45.8706 20( 20) V-M-x-G-Y-S-D-S-x-K-D-x-G-x(5)-W 19: 44.8706 20( 20) G-G-x(2)-G-R-G-G-x-P-x(2,3)-A-x-L-x(1,2)-Q-P 20: 43.8706 20( 20) P-W-x(3)-W-x-Q-x-R-x(0,2)-L-x(0,2)-P-x-W-x-G-x-G-x-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 129.2435 20( 20) V-M-[ILV]-G-Y-S-D-S-[AGN]-K-D-[AGS]-G-x-[FLM]-[AS]-[AS]-[ANS]-W-[AEQ]-x-[HY]-x-[ATV]-[EQ]-x-[ADEQS]-[ILM]-x(3)-[ACST]-x(4)-[IV]-x-[LV]-x-[ILM]-F-H-G-R-G-G-[ST]-[IV]-G B 2: 127.3394 25( 20) L-x(0,2)-F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-[AST]-[HY]-x-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] C 3: 126.5817 20( 20) V-M-x-G-Y-S-D-S-[AGN]-K-D-[AGS]-G-x-[FLM]-[AS]-[AS]-[ANS]-W-[AEQ]-x-[HY]-x-[ATV]-[EQ]-x-[ADEQS]-[ILM]-x(3)-[ACST]-x(4)-[IV]-x-[LV]-x-[ILM]-F-H-G-R-G-G-[ST]-[IV]-G D 4: 126.0187 20( 20) Q-x-V-M-[ILV]-G-Y-S-D-S-[AGN]-K-D-[AGS]-G-x-[FLM]-[AS]-[AS]-[ANS]-W-[AEQ]-x-[HY]-x-[ATV]-[EQ]-x-[ADEQS]-[ILM]-x(3)-[ACST]-x(4)-[IV]-x-[LV]-x-[ILM]-F-H-G-R-G-G-[ST] E 5: 124.1694 20( 20) F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-[AST]-[HY]-x-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] F 6: 121.0626 25( 20) L-x(0,2)-F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] G 7: 118.0745 20( 20) G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-[AST]-[HY]-x-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] H 8: 114.7134 20( 20) F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] I 9: 112.7886 20( 20) H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] J 10: 108.6185 20( 20) G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] K 11: 104.4485 20( 20) R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] L 12: 102.8976 20( 20) G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST]-x(2)-[NST] M 13: 99.7222 20( 20) G-G-x-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST]-x(2)-[NST] N 14: 96.4973 20( 20) G-G-x(2)-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST]-x(2)-[NST] O 15: 86.6065 20( 20) L-R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] P 16: 82.4364 20( 20) R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Q 17: 81.9566 20( 20) L-R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-x(0,2)-L-x(0,2)-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] R 18: 78.2664 20( 20) A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] S 19: 77.7866 20( 20) R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-x(0,2)-L-x(0,2)-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] T 20: 74.0963 20( 20) I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 129.2435 20( 20) V-M-[ILV]-G-Y-S-D-S-[AGN]-K-D-[AGS]-G-x-[FLM]-[AS]-[AS]-[ANS]-W-[AEQ]-x-[HY]-x-[ATV]-[EQ]-x-[ADEQS]-[ILM]-x(3)-[ACST]-x(4)-[IV]-x-[LV]-x-[ILM]-F-H-G-R-G-G-[ST]-[IV]-G Occurences: 20(20) CAP1_FLAPR : 592- 641: dgkqe VMIGYSDSGKDAGrFSAAWQlYkAQeEIikvAkefgVkLvIFHGRGGTVG rgggp CAP1_FLATR : 592- 641: dgkqe VMIGYSDSGKDAGrFSAAWQlYkTQeQIvkiAkefgVkLvIFHGRGGTVG rgggp CAP1_MESCR : 592- 641: dgkqe VMIGYSDSGKDAGrLSAAWQmYkVQeELlkvSkkfgVkLtMFHGRGGTVG rgggp CAP1_SACHY : 592- 641: ngkqe VMIGYSDSGKDAGrFSAAWQlYkAQeELinvAklygVkLtMFHGRGGTVG rgggp CAP1_SORVU : 587- 636: ngkqe VMIGYSDSGKDAGrLSAAWQmYkAQeELikvAkhygVkLtMFHGRGGTVG rgggp CAP1_SOYBN : 593- 642: ngkqe VMIGYSDSGKDAGrFSAAWQlYkAQeELimvAkqygVkLtMFHGRGGTVG rgggp CAP2_FLATR : 591- 640: dgkqe VMIGYSDSGKDAGrFSAAWQlYkTQeQIvkiAkefgVkLvIFHGRGGTVG rgggp CAP2_MESCR : 584- 633: ngkqe VMIGYSDSGKDAGrLSAAWAlYkAQeELvqvAkeygVkLtMFHGRGGTVG rgggp CAP2_SORVU : 586- 635: ngkqe VMIGYSDSGKDAGrLSAAWQlYkAQeELikvAkdfgVkLtMFHGRGGTVG rgggp CAP3_SORVU : 588- 637: ngkqq VMVGYSDSGKDAGrLSAAWQlYvAQeEMakvAkkygVkLtLFHGRGGTVG rgggp CAPP_ANANI : 690- 739: eplqe VMLGYSDSNKDSGfLSSNWEiHkAQkALgtvArdhrVkLrIFHGRGGSVG rgggp CAPP_ANASP : 619- 668: pdlqe VMLGYSDSNKDSGfLSSNWEiHkAQkSLqqiAeeygVnLrIFHGRGGSVG rgggp CAPP_CORGL : 569- 618: dnvqe VMLGYSDSNKDGGyFSANWAlYdAElQLvelCrsagVnVrLFHGRGGTVG rgggp CAPP_ECOLI : 537- 586: qgkqm VMIGYSDSAKDAGvMAASWAqYqAQdALiktCekagIeLtLFHGRGGSIG rggap CAPP_HAEIN : 536- 585: nnrqm VMIGYSDSAKDAGmMAASWAqYrAQeALvnlTeklgIeLtLFHGRGGTIG rggap CAPP_MAIZE : 597- 646: kgkqq VMVGYSDSGKDAGrLSAAWQlYrAQeEMaqvAkrygVkLtLFHGRGGTVG rgggp CAPP_MEDSA : 592- 641: dgkqe VMIGYSDSGKDAGrFSAAWQlYkAQeDLikvAqkfgVkLtMFHGRGGTVG rgggp CAPP_MYCLE : 557- 606: gnwqe VMLGYSDSNKDGGyLAANWAvYrAElALvdvArktgIrLrLFHGRGGTVG rgggp CAPP_SOLTU : 592- 641: ngkqe VMIGYSDSGKDAGrLSAAWQlYkAQeELiqvAkefdVkLtMFHGRGGTVG rgggp CAPP_TOBAC : 591- 640: ngkqe VMVGYSDSGKDAGrFSAAWQlYkAQeELikvAkehgVkLtMFHGRGGTVG rgggp B 2: 127.3394 25( 20) L-x(0,2)-F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-[AST]-[HY]-x-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] Occurences: 25(20) CAP1_FLAPR : 630- 677: efgvk LviFHGRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIeqsfG eehlc CAP1_FLATR : 630- 677: efgvk LviFHGRGGTVGRGGGPTHlALLSQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP1_MESCR : 630- 677: kfgvk LtmFHGRGGTVGRGGGPTHlAILAQPaeTigGsLRVTiQGEVIeqsfG eqhlc CAP1_SACHY : 630- 677: lygvk LtmFHGRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAP1_SORVU : 625- 672: hygvk LtmFHGRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIehsfG eellc CAP1_SOYBN : 631- 678: qygvk LtmFHGRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfG eqhlc CAP2_FLATR : 629- 676: efgvk LviFHGRGGTVGRGGGPTHlALLSQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP2_MESCR : 622- 669: eygvk LtmFHGRGGTVGRGGGPTHlAILSQPpeTvnGsLRVTvQGEVIeqsfG eehlc CAP2_SORVU : 624- 671: dfgvk LtmFHGRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIeqsfG eehls CAP3_SORVU : 626- 673: kygvk LtlFHGRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefmfG eenlc CAP3_SORVU : 628- 673: gvklt L--FHGRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefmfG eenlc CAPP_ANANI : 728- 775: dhrvk LriFHGRGGSVGRGGGPAYeAILAQPgrTtdGrIKITeQGEVLaskyA lpela CAPP_ANASP : 657- 704: eygvn LriFHGRGGSVGRGGGPAHeAILAQPghSinGrIKITeQGEVLaskyS lldla CAPP_CORGL : 609- 654: gvnvr L--FHGRGGTVGRGGGPSYdAILAQPrgAvqGsVRITeQGEIIsakyG npeta CAPP_ECOLI : 575- 622: kagie LtlFHGRGGSIGRGGAPAHaALLSQPpgSlkGgLRVTeQGEMIrfkyG lpeit CAPP_ECOLI : 577- 622: gielt L--FHGRGGSIGRGGAPAHaALLSQPpgSlkGgLRVTeQGEMIrfkyG lpeit CAPP_HAEIN : 574- 621: klgie LtlFHGRGGTIGRGGAPAHaALLSQPprSlkNgLRVTeQGEMIrfklG lpava CAPP_HAEIN : 576- 621: gielt L--FHGRGGTIGRGGAPAHaALLSQPprSlkNgLRVTeQGEMIrfklG lpava CAPP_MAIZE : 635- 682: rygvk LtlFHGRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefcfG eehlc CAPP_MAIZE : 637- 682: gvklt L--FHGRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefcfG eehlc CAPP_MEDSA : 630- 677: kfgvk LtmFHGRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_MYCLE : 595- 642: ktgir LrlFHGRGGTVGRGGGPSYqAILAQPpgAvnGsLRLTeQGEVIaakyA epqia CAPP_MYCLE : 597- 642: girlr L--FHGRGGTVGRGGGPSYqAILAQPpgAvnGsLRLTeQGEVIaakyA epqia CAPP_SOLTU : 630- 677: efdvk LtmFHGRGGTVGRGGGPAHlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_TOBAC : 629- 676: ehgvk LtmFHGRGGTVGRGGGPTHlAILSQPpdTiqGsLRVTvQGEVIeqsfG eehlc C 3: 126.5817 20( 20) V-M-x-G-Y-S-D-S-[AGN]-K-D-[AGS]-G-x-[FLM]-[AS]-[AS]-[ANS]-W-[AEQ]-x-[HY]-x-[ATV]-[EQ]-x-[ADEQS]-[ILM]-x(3)-[ACST]-x(4)-[IV]-x-[LV]-x-[ILM]-F-H-G-R-G-G-[ST]-[IV]-G Occurences: 20(20) CAP1_FLAPR : 592- 641: dgkqe VMiGYSDSGKDAGrFSAAWQlYkAQeEIikvAkefgVkLvIFHGRGGTVG rgggp CAP1_FLATR : 592- 641: dgkqe VMiGYSDSGKDAGrFSAAWQlYkTQeQIvkiAkefgVkLvIFHGRGGTVG rgggp CAP1_MESCR : 592- 641: dgkqe VMiGYSDSGKDAGrLSAAWQmYkVQeELlkvSkkfgVkLtMFHGRGGTVG rgggp CAP1_SACHY : 592- 641: ngkqe VMiGYSDSGKDAGrFSAAWQlYkAQeELinvAklygVkLtMFHGRGGTVG rgggp CAP1_SORVU : 587- 636: ngkqe VMiGYSDSGKDAGrLSAAWQmYkAQeELikvAkhygVkLtMFHGRGGTVG rgggp CAP1_SOYBN : 593- 642: ngkqe VMiGYSDSGKDAGrFSAAWQlYkAQeELimvAkqygVkLtMFHGRGGTVG rgggp CAP2_FLATR : 591- 640: dgkqe VMiGYSDSGKDAGrFSAAWQlYkTQeQIvkiAkefgVkLvIFHGRGGTVG rgggp CAP2_MESCR : 584- 633: ngkqe VMiGYSDSGKDAGrLSAAWAlYkAQeELvqvAkeygVkLtMFHGRGGTVG rgggp CAP2_SORVU : 586- 635: ngkqe VMiGYSDSGKDAGrLSAAWQlYkAQeELikvAkdfgVkLtMFHGRGGTVG rgggp CAP3_SORVU : 588- 637: ngkqq VMvGYSDSGKDAGrLSAAWQlYvAQeEMakvAkkygVkLtLFHGRGGTVG rgggp CAPP_ANANI : 690- 739: eplqe VMlGYSDSNKDSGfLSSNWEiHkAQkALgtvArdhrVkLrIFHGRGGSVG rgggp CAPP_ANASP : 619- 668: pdlqe VMlGYSDSNKDSGfLSSNWEiHkAQkSLqqiAeeygVnLrIFHGRGGSVG rgggp CAPP_CORGL : 569- 618: dnvqe VMlGYSDSNKDGGyFSANWAlYdAElQLvelCrsagVnVrLFHGRGGTVG rgggp CAPP_ECOLI : 537- 586: qgkqm VMiGYSDSAKDAGvMAASWAqYqAQdALiktCekagIeLtLFHGRGGSIG rggap CAPP_HAEIN : 536- 585: nnrqm VMiGYSDSAKDAGmMAASWAqYrAQeALvnlTeklgIeLtLFHGRGGTIG rggap CAPP_MAIZE : 597- 646: kgkqq VMvGYSDSGKDAGrLSAAWQlYrAQeEMaqvAkrygVkLtLFHGRGGTVG rgggp CAPP_MEDSA : 592- 641: dgkqe VMiGYSDSGKDAGrFSAAWQlYkAQeDLikvAqkfgVkLtMFHGRGGTVG rgggp CAPP_MYCLE : 557- 606: gnwqe VMlGYSDSNKDGGyLAANWAvYrAElALvdvArktgIrLrLFHGRGGTVG rgggp CAPP_SOLTU : 592- 641: ngkqe VMiGYSDSGKDAGrLSAAWQlYkAQeELiqvAkefdVkLtMFHGRGGTVG rgggp CAPP_TOBAC : 591- 640: ngkqe VMvGYSDSGKDAGrFSAAWQlYkAQeELikvAkehgVkLtMFHGRGGTVG rgggp D 4: 126.0187 20( 20) Q-x-V-M-[ILV]-G-Y-S-D-S-[AGN]-K-D-[AGS]-G-x-[FLM]-[AS]-[AS]-[ANS]-W-[AEQ]-x-[HY]-x-[ATV]-[EQ]-x-[ADEQS]-[ILM]-x(3)-[ACST]-x(4)-[IV]-x-[LV]-x-[ILM]-F-H-G-R-G-G-[ST] Occurences: 20(20) CAP1_FLAPR : 590- 639: ridgk QeVMIGYSDSGKDAGrFSAAWQlYkAQeEIikvAkefgVkLvIFHGRGGT vgrgg CAP1_FLATR : 590- 639: ridgk QeVMIGYSDSGKDAGrFSAAWQlYkTQeQIvkiAkefgVkLvIFHGRGGT vgrgg CAP1_MESCR : 590- 639: ridgk QeVMIGYSDSGKDAGrLSAAWQmYkVQeELlkvSkkfgVkLtMFHGRGGT vgrgg CAP1_SACHY : 590- 639: ringk QeVMIGYSDSGKDAGrFSAAWQlYkAQeELinvAklygVkLtMFHGRGGT vgrgg CAP1_SORVU : 585- 634: ringk QeVMIGYSDSGKDAGrLSAAWQmYkAQeELikvAkhygVkLtMFHGRGGT vgrgg CAP1_SOYBN : 591- 640: ringk QeVMIGYSDSGKDAGrFSAAWQlYkAQeELimvAkqygVkLtMFHGRGGT vgrgg CAP2_FLATR : 589- 638: ridgk QeVMIGYSDSGKDAGrFSAAWQlYkTQeQIvkiAkefgVkLvIFHGRGGT vgrgg CAP2_MESCR : 582- 631: ringk QeVMIGYSDSGKDAGrLSAAWAlYkAQeELvqvAkeygVkLtMFHGRGGT vgrgg CAP2_SORVU : 584- 633: ringk QeVMIGYSDSGKDAGrLSAAWQlYkAQeELikvAkdfgVkLtMFHGRGGT vgrgg CAP3_SORVU : 586- 635: hingk QqVMVGYSDSGKDAGrLSAAWQlYvAQeEMakvAkkygVkLtLFHGRGGT vgrgg CAPP_ANANI : 688- 737: qsepl QeVMLGYSDSNKDSGfLSSNWEiHkAQkALgtvArdhrVkLrIFHGRGGS vgrgg CAPP_ANASP : 617- 666: ltpdl QeVMLGYSDSNKDSGfLSSNWEiHkAQkSLqqiAeeygVnLrIFHGRGGS vgrgg CAPP_CORGL : 567- 616: qrdnv QeVMLGYSDSNKDGGyFSANWAlYdAElQLvelCrsagVnVrLFHGRGGT vgrgg CAPP_ECOLI : 535- 584: liqgk QmVMIGYSDSAKDAGvMAASWAqYqAQdALiktCekagIeLtLFHGRGGS igrgg CAPP_HAEIN : 534- 583: vinnr QmVMIGYSDSAKDAGmMAASWAqYrAQeALvnlTeklgIeLtLFHGRGGT igrgg CAPP_MAIZE : 595- 644: rikgk QqVMVGYSDSGKDAGrLSAAWQlYrAQeEMaqvAkrygVkLtLFHGRGGT vgrgg CAPP_MEDSA : 590- 639: ridgk QeVMIGYSDSGKDAGrFSAAWQlYkAQeDLikvAqkfgVkLtMFHGRGGT vgrgg CAPP_MYCLE : 555- 604: argnw QeVMLGYSDSNKDGGyLAANWAvYrAElALvdvArktgIrLrLFHGRGGT vgrgg CAPP_SOLTU : 590- 639: ringk QeVMIGYSDSGKDAGrLSAAWQlYkAQeELiqvAkefdVkLtMFHGRGGT vgrgg CAPP_TOBAC : 589- 638: ringk QeVMVGYSDSGKDAGrFSAAWQlYkAQeELikvAkehgVkLtMFHGRGGT vgrgg E 5: 124.1694 20( 20) F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-[AST]-[HY]-x-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] Occurences: 20(20) CAP1_FLAPR : 633- 677: vklvi FHGRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIeqsfG eehlc CAP1_FLATR : 633- 677: vklvi FHGRGGTVGRGGGPTHlALLSQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP1_MESCR : 633- 677: vkltm FHGRGGTVGRGGGPTHlAILAQPaeTigGsLRVTiQGEVIeqsfG eqhlc CAP1_SACHY : 633- 677: vkltm FHGRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAP1_SORVU : 628- 672: vkltm FHGRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIehsfG eellc CAP1_SOYBN : 634- 678: vkltm FHGRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfG eqhlc CAP2_FLATR : 632- 676: vklvi FHGRGGTVGRGGGPTHlALLSQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP2_MESCR : 625- 669: vkltm FHGRGGTVGRGGGPTHlAILSQPpeTvnGsLRVTvQGEVIeqsfG eehlc CAP2_SORVU : 627- 671: vkltm FHGRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIeqsfG eehls CAP3_SORVU : 629- 673: vkltl FHGRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefmfG eenlc CAPP_ANANI : 731- 775: vklri FHGRGGSVGRGGGPAYeAILAQPgrTtdGrIKITeQGEVLaskyA lpela CAPP_ANASP : 660- 704: vnlri FHGRGGSVGRGGGPAHeAILAQPghSinGrIKITeQGEVLaskyS lldla CAPP_CORGL : 610- 654: vnvrl FHGRGGTVGRGGGPSYdAILAQPrgAvqGsVRITeQGEIIsakyG npeta CAPP_ECOLI : 578- 622: ieltl FHGRGGSIGRGGAPAHaALLSQPpgSlkGgLRVTeQGEMIrfkyG lpeit CAPP_HAEIN : 577- 621: ieltl FHGRGGTIGRGGAPAHaALLSQPprSlkNgLRVTeQGEMIrfklG lpava CAPP_MAIZE : 638- 682: vkltl FHGRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefcfG eehlc CAPP_MEDSA : 633- 677: vkltm FHGRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_MYCLE : 598- 642: irlrl FHGRGGTVGRGGGPSYqAILAQPpgAvnGsLRLTeQGEVIaakyA epqia CAPP_SOLTU : 633- 677: vkltm FHGRGGTVGRGGGPAHlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_TOBAC : 632- 676: vkltm FHGRGGTVGRGGGPTHlAILSQPpdTiqGsLRVTvQGEVIeqsfG eehlc F 6: 121.0626 25( 20) L-x(0,2)-F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] Occurences: 25(20) CAP1_FLAPR : 630- 677: efgvk LviFHGRGGTVGRGGGPthlAILSQPpdTihGsLRVTvQGEVIeqsfG eehlc CAP1_FLATR : 630- 677: efgvk LviFHGRGGTVGRGGGPthlALLSQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP1_MESCR : 630- 677: kfgvk LtmFHGRGGTVGRGGGPthlAILAQPaeTigGsLRVTiQGEVIeqsfG eqhlc CAP1_SACHY : 630- 677: lygvk LtmFHGRGGTVGRGGGPthlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAP1_SORVU : 625- 672: hygvk LtmFHGRGGTVGRGGGPthlAILSQPpdTihGsLRVTvQGEVIehsfG eellc CAP1_SOYBN : 631- 678: qygvk LtmFHGRGGTVGRGGGPthlAILSQPpeTihGsLRVTvQGEVIeqsfG eqhlc CAP2_FLATR : 629- 676: efgvk LviFHGRGGTVGRGGGPthlALLSQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP2_MESCR : 622- 669: eygvk LtmFHGRGGTVGRGGGPthlAILSQPpeTvnGsLRVTvQGEVIeqsfG eehlc CAP2_SORVU : 624- 671: dfgvk LtmFHGRGGTVGRGGGPthlAILSQPpdTihGsLRVTvQGEVIeqsfG eehls CAP3_SORVU : 626- 673: kygvk LtlFHGRGGTVGRGGGPthlAILSQPpdTinGsIRVTvQGEVIefmfG eenlc CAP3_SORVU : 628- 673: gvklt L--FHGRGGTVGRGGGPthlAILSQPpdTinGsIRVTvQGEVIefmfG eenlc CAPP_ANANI : 728- 775: dhrvk LriFHGRGGSVGRGGGPayeAILAQPgrTtdGrIKITeQGEVLaskyA lpela CAPP_ANASP : 657- 704: eygvn LriFHGRGGSVGRGGGPaheAILAQPghSinGrIKITeQGEVLaskyS lldla CAPP_CORGL : 609- 654: gvnvr L--FHGRGGTVGRGGGPsydAILAQPrgAvqGsVRITeQGEIIsakyG npeta CAPP_ECOLI : 575- 622: kagie LtlFHGRGGSIGRGGAPahaALLSQPpgSlkGgLRVTeQGEMIrfkyG lpeit CAPP_ECOLI : 577- 622: gielt L--FHGRGGSIGRGGAPahaALLSQPpgSlkGgLRVTeQGEMIrfkyG lpeit CAPP_HAEIN : 574- 621: klgie LtlFHGRGGTIGRGGAPahaALLSQPprSlkNgLRVTeQGEMIrfklG lpava CAPP_HAEIN : 576- 621: gielt L--FHGRGGTIGRGGAPahaALLSQPprSlkNgLRVTeQGEMIrfklG lpava CAPP_MAIZE : 635- 682: rygvk LtlFHGRGGTVGRGGGPthlAILSQPpdTinGsIRVTvQGEVIefcfG eehlc CAPP_MAIZE : 637- 682: gvklt L--FHGRGGTVGRGGGPthlAILSQPpdTinGsIRVTvQGEVIefcfG eehlc CAPP_MEDSA : 630- 677: kfgvk LtmFHGRGGTVGRGGGPthlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_MYCLE : 595- 642: ktgir LrlFHGRGGTVGRGGGPsyqAILAQPpgAvnGsLRLTeQGEVIaakyA epqia CAPP_MYCLE : 597- 642: girlr L--FHGRGGTVGRGGGPsyqAILAQPpgAvnGsLRLTeQGEVIaakyA epqia CAPP_SOLTU : 630- 677: efdvk LtmFHGRGGTVGRGGGPahlAILSQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_TOBAC : 629- 676: ehgvk LtmFHGRGGTVGRGGGPthlAILSQPpdTiqGsLRVTvQGEVIeqsfG eehlc G 7: 118.0745 20( 20) G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-[AST]-[HY]-x-A-[IL]-L-[AS]-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] Occurences: 20(20) CAP1_FLAPR : 635- 682: lvifh GRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_FLATR : 635- 682: lvifh GRGGTVGRGGGPTHlALLSQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_MESCR : 635- 682: ltmfh GRGGTVGRGGGPTHlAILAQPaeTigGsLRVTiQGEVIeqsfGeqhlC frtlq CAP1_SACHY : 635- 682: ltmfh GRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_SORVU : 630- 677: ltmfh GRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIehsfGeellC frtlq CAP1_SOYBN : 636- 683: ltmfh GRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfGeqhlC frtlq CAP2_FLATR : 634- 681: lvifh GRGGTVGRGGGPTHlALLSQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_MESCR : 627- 674: ltmfh GRGGTVGRGGGPTHlAILSQPpeTvnGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_SORVU : 629- 676: ltmfh GRGGTVGRGGGPTHlAILSQPpdTihGsLRVTvQGEVIeqsfGeehlS frtlq CAP3_SORVU : 631- 678: ltlfh GRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefmfGeenlC fqslq CAPP_ANANI : 733- 780: lrifh GRGGSVGRGGGPAYeAILAQPgrTtdGrIKITeQGEVLaskyAlpelA lynle CAPP_ANASP : 662- 709: lrifh GRGGSVGRGGGPAHeAILAQPghSinGrIKITeQGEVLaskySlldlA lynle CAPP_CORGL : 612- 659: vrlfh GRGGTVGRGGGPSYdAILAQPrgAvqGsVRITeQGEIIsakyGnpetA rrnle CAPP_ECOLI : 580- 627: ltlfh GRGGSIGRGGAPAHaALLSQPpgSlkGgLRVTeQGEMIrfkyGlpeiT vssls CAPP_HAEIN : 579- 626: ltlfh GRGGTIGRGGAPAHaALLSQPprSlkNgLRVTeQGEMIrfklGlpavA vetfd CAPP_MAIZE : 640- 687: ltlfh GRGGTVGRGGGPTHlAILSQPpdTinGsIRVTvQGEVIefcfGeehlC fqtlq CAPP_MEDSA : 635- 682: ltmfh GRGGTVGRGGGPTHlAILSQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_MYCLE : 600- 647: lrlfh GRGGTVGRGGGPSYqAILAQPpgAvnGsLRLTeQGEVIaakyAepqiA rrnle CAPP_SOLTU : 635- 682: ltmfh GRGGTVGRGGGPAHlAILSQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_TOBAC : 634- 681: ltmfh GRGGTVGRGGGPTHlAILSQPpdTiqGsLRVTvQGEVIeqsfGeehlC frtlq H 8: 114.7134 20( 20) F-H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS] Occurences: 20(20) CAP1_FLAPR : 633- 677: vklvi FHGRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfG eehlc CAP1_FLATR : 633- 677: vklvi FHGRGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP1_MESCR : 633- 677: vkltm FHGRGGTVGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfG eqhlc CAP1_SACHY : 633- 677: vkltm FHGRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfG eehlc CAP1_SORVU : 628- 672: vkltm FHGRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfG eellc CAP1_SOYBN : 634- 678: vkltm FHGRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfG eqhlc CAP2_FLATR : 632- 676: vklvi FHGRGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfG eehlc CAP2_MESCR : 625- 669: vkltm FHGRGGTVGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfG eehlc CAP2_SORVU : 627- 671: vkltm FHGRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfG eehls CAP3_SORVU : 629- 673: vkltl FHGRGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfG eenlc CAPP_ANANI : 731- 775: vklri FHGRGGSVGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyA lpela CAPP_ANASP : 660- 704: vnlri FHGRGGSVGRGGGPaheAILaQPghSinGrIKITeQGEVLaskyS lldla CAPP_CORGL : 610- 654: vnvrl FHGRGGTVGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyG npeta CAPP_ECOLI : 578- 622: ieltl FHGRGGSIGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyG lpeit CAPP_HAEIN : 577- 621: ieltl FHGRGGTIGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklG lpava CAPP_MAIZE : 638- 682: vkltl FHGRGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfG eehlc CAPP_MEDSA : 633- 677: vkltm FHGRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_MYCLE : 598- 642: irlrl FHGRGGTVGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyA epqia CAPP_SOLTU : 633- 677: vkltm FHGRGGTVGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfG eehlc CAPP_TOBAC : 632- 676: vkltm FHGRGGTVGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfG eehlc I 9: 112.7886 20( 20) H-G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] Occurences: 20(20) CAP1_FLAPR : 634- 682: klvif HGRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_FLATR : 634- 682: klvif HGRGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_MESCR : 634- 682: kltmf HGRGGTVGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfGeqhlC frtlq CAP1_SACHY : 634- 682: kltmf HGRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_SORVU : 629- 677: kltmf HGRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfGeellC frtlq CAP1_SOYBN : 635- 683: kltmf HGRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeqhlC frtlq CAP2_FLATR : 633- 681: klvif HGRGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_MESCR : 626- 674: kltmf HGRGGTVGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_SORVU : 628- 676: kltmf HGRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlS frtlq CAP3_SORVU : 630- 678: kltlf HGRGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfGeenlC fqslq CAPP_ANANI : 732- 780: klrif HGRGGSVGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyAlpelA lynle CAPP_ANASP : 661- 709: nlrif HGRGGSVGRGGGPaheAILaQPghSinGrIKITeQGEVLaskySlldlA lynle CAPP_CORGL : 611- 659: nvrlf HGRGGTVGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyGnpetA rrnle CAPP_ECOLI : 579- 627: eltlf HGRGGSIGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyGlpeiT vssls CAPP_HAEIN : 578- 626: eltlf HGRGGTIGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklGlpavA vetfd CAPP_MAIZE : 639- 687: kltlf HGRGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfGeehlC fqtlq CAPP_MEDSA : 634- 682: kltmf HGRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_MYCLE : 599- 647: rlrlf HGRGGTVGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyAepqiA rrnle CAPP_SOLTU : 634- 682: kltmf HGRGGTVGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_TOBAC : 633- 681: kltmf HGRGGTVGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfGeehlC frtlq J 10: 108.6185 20( 20) G-R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] Occurences: 20(20) CAP1_FLAPR : 635- 682: lvifh GRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_FLATR : 635- 682: lvifh GRGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_MESCR : 635- 682: ltmfh GRGGTVGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfGeqhlC frtlq CAP1_SACHY : 635- 682: ltmfh GRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_SORVU : 630- 677: ltmfh GRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfGeellC frtlq CAP1_SOYBN : 636- 683: ltmfh GRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeqhlC frtlq CAP2_FLATR : 634- 681: lvifh GRGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_MESCR : 627- 674: ltmfh GRGGTVGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_SORVU : 629- 676: ltmfh GRGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlS frtlq CAP3_SORVU : 631- 678: ltlfh GRGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfGeenlC fqslq CAPP_ANANI : 733- 780: lrifh GRGGSVGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyAlpelA lynle CAPP_ANASP : 662- 709: lrifh GRGGSVGRGGGPaheAILaQPghSinGrIKITeQGEVLaskySlldlA lynle CAPP_CORGL : 612- 659: vrlfh GRGGTVGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyGnpetA rrnle CAPP_ECOLI : 580- 627: ltlfh GRGGSIGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyGlpeiT vssls CAPP_HAEIN : 579- 626: ltlfh GRGGTIGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklGlpavA vetfd CAPP_MAIZE : 640- 687: ltlfh GRGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfGeehlC fqtlq CAPP_MEDSA : 635- 682: ltmfh GRGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_MYCLE : 600- 647: lrlfh GRGGTVGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyAepqiA rrnle CAPP_SOLTU : 635- 682: ltmfh GRGGTVGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_TOBAC : 634- 681: ltmfh GRGGTVGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfGeehlC frtlq K 11: 104.4485 20( 20) R-G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST] Occurences: 20(20) CAP1_FLAPR : 636- 682: vifhg RGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_FLATR : 636- 682: vifhg RGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_MESCR : 636- 682: tmfhg RGGTVGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfGeqhlC frtlq CAP1_SACHY : 636- 682: tmfhg RGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAP1_SORVU : 631- 677: tmfhg RGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfGeellC frtlq CAP1_SOYBN : 637- 683: tmfhg RGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeqhlC frtlq CAP2_FLATR : 635- 681: vifhg RGGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_MESCR : 628- 674: tmfhg RGGTVGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfGeehlC frtlq CAP2_SORVU : 630- 676: tmfhg RGGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlS frtlq CAP3_SORVU : 632- 678: tlfhg RGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfGeenlC fqslq CAPP_ANANI : 734- 780: rifhg RGGSVGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyAlpelA lynle CAPP_ANASP : 663- 709: rifhg RGGSVGRGGGPaheAILaQPghSinGrIKITeQGEVLaskySlldlA lynle CAPP_CORGL : 613- 659: rlfhg RGGTVGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyGnpetA rrnle CAPP_ECOLI : 581- 627: tlfhg RGGSIGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyGlpeiT vssls CAPP_HAEIN : 580- 626: tlfhg RGGTIGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklGlpavA vetfd CAPP_MAIZE : 641- 687: tlfhg RGGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfGeehlC fqtlq CAPP_MEDSA : 636- 682: tmfhg RGGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_MYCLE : 601- 647: rlfhg RGGTVGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyAepqiA rrnle CAPP_SOLTU : 636- 682: tmfhg RGGTVGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlC frtlq CAPP_TOBAC : 635- 681: tmfhg RGGTVGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfGeehlC frtlq L 12: 102.8976 20( 20) G-G-[ST]-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST]-x(2)-[NST] Occurences: 20(20) CAP1_FLAPR : 637- 685: ifhgr GGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP1_FLATR : 637- 685: ifhgr GGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP1_MESCR : 637- 685: mfhgr GGTVGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfGeqhlCfrT lqryt CAP1_SACHY : 637- 685: mfhgr GGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAP1_SORVU : 632- 680: mfhgr GGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfGeellCfrT lqryt CAP1_SOYBN : 638- 686: mfhgr GGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeqhlCfrT lqrft CAP2_FLATR : 636- 684: ifhgr GGTVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP2_MESCR : 629- 677: mfhgr GGTVGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAP2_SORVU : 631- 679: mfhgr GGTVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlSfrT lqrft CAP3_SORVU : 633- 681: lfhgr GGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfGeenlCfqS lqrft CAPP_ANANI : 735- 783: ifhgr GGSVGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyAlpelAlyN letit CAPP_ANASP : 664- 712: ifhgr GGSVGRGGGPaheAILaQPghSinGrIKITeQGEVLaskySlldlAlyN letit CAPP_CORGL : 614- 662: lfhgr GGTVGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyGnpetArrN lealv CAPP_ECOLI : 582- 630: lfhgr GGSIGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyGlpeiTvsS lslyt CAPP_HAEIN : 581- 629: lfhgr GGTIGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklGlpavAveT fdlya CAPP_MAIZE : 642- 690: lfhgr GGTVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfGeehlCfqT lqrft CAPP_MEDSA : 637- 685: mfhgr GGTVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAPP_MYCLE : 602- 650: lfhgr GGTVGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyAepqiArrN leslv CAPP_SOLTU : 637- 685: mfhgr GGTVGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAPP_TOBAC : 636- 684: mfhgr GGTVGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfGeehlCfrT lqrft M 13: 99.7222 20( 20) G-G-x-[IV]-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST]-x(2)-[NST] Occurences: 20(20) CAP1_FLAPR : 637- 685: ifhgr GGtVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP1_FLATR : 637- 685: ifhgr GGtVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP1_MESCR : 637- 685: mfhgr GGtVGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfGeqhlCfrT lqryt CAP1_SACHY : 637- 685: mfhgr GGtVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAP1_SORVU : 632- 680: mfhgr GGtVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfGeellCfrT lqryt CAP1_SOYBN : 638- 686: mfhgr GGtVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeqhlCfrT lqrft CAP2_FLATR : 636- 684: ifhgr GGtVGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP2_MESCR : 629- 677: mfhgr GGtVGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAP2_SORVU : 631- 679: mfhgr GGtVGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlSfrT lqrft CAP3_SORVU : 633- 681: lfhgr GGtVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfGeenlCfqS lqrft CAPP_ANANI : 735- 783: ifhgr GGsVGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyAlpelAlyN letit CAPP_ANASP : 664- 712: ifhgr GGsVGRGGGPaheAILaQPghSinGrIKITeQGEVLaskySlldlAlyN letit CAPP_CORGL : 614- 662: lfhgr GGtVGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyGnpetArrN lealv CAPP_ECOLI : 582- 630: lfhgr GGsIGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyGlpeiTvsS lslyt CAPP_HAEIN : 581- 629: lfhgr GGtIGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklGlpavAveT fdlya CAPP_MAIZE : 642- 690: lfhgr GGtVGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfGeehlCfqT lqrft CAPP_MEDSA : 637- 685: mfhgr GGtVGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAPP_MYCLE : 602- 650: lfhgr GGtVGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyAepqiArrN leslv CAPP_SOLTU : 637- 685: mfhgr GGtVGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAPP_TOBAC : 636- 684: mfhgr GGtVGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfGeehlCfrT lqrft N 14: 96.4973 20( 20) G-G-x(2)-G-R-G-G-[AG]-P-x(2,3)-A-[IL]-L-x-Q-P-x(2)-[AST]-x(2)-[GN]-x-[ILV]-[KR]-[ILV]-T-x-Q-G-E-[IMV]-[IL]-x(4)-[AGS]-x(4)-[ACST]-x(2)-[NST] Occurences: 20(20) CAP1_FLAPR : 637- 685: ifhgr GGtvGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP1_FLATR : 637- 685: ifhgr GGtvGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP1_MESCR : 637- 685: mfhgr GGtvGRGGGPthlAILaQPaeTigGsLRVTiQGEVIeqsfGeqhlCfrT lqryt CAP1_SACHY : 637- 685: mfhgr GGtvGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAP1_SORVU : 632- 680: mfhgr GGtvGRGGGPthlAILsQPpdTihGsLRVTvQGEVIehsfGeellCfrT lqryt CAP1_SOYBN : 638- 686: mfhgr GGtvGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeqhlCfrT lqrft CAP2_FLATR : 636- 684: ifhgr GGtvGRGGGPthlALLsQPpdTinGsLRVTvQGEVIeqsfGeehlCfrT lqrfc CAP2_MESCR : 629- 677: mfhgr GGtvGRGGGPthlAILsQPpeTvnGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAP2_SORVU : 631- 679: mfhgr GGtvGRGGGPthlAILsQPpdTihGsLRVTvQGEVIeqsfGeehlSfrT lqrft CAP3_SORVU : 633- 681: lfhgr GGtvGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefmfGeenlCfqS lqrft CAPP_ANANI : 735- 783: ifhgr GGsvGRGGGPayeAILaQPgrTtdGrIKITeQGEVLaskyAlpelAlyN letit CAPP_ANASP : 664- 712: ifhgr GGsvGRGGGPaheAILaQPghSinGrIKITeQGEVLaskySlldlAlyN letit CAPP_CORGL : 614- 662: lfhgr GGtvGRGGGPsydAILaQPrgAvqGsVRITeQGEIIsakyGnpetArrN lealv CAPP_ECOLI : 582- 630: lfhgr GGsiGRGGAPahaALLsQPpgSlkGgLRVTeQGEMIrfkyGlpeiTvsS lslyt CAPP_HAEIN : 581- 629: lfhgr GGtiGRGGAPahaALLsQPprSlkNgLRVTeQGEMIrfklGlpavAveT fdlya CAPP_MAIZE : 642- 690: lfhgr GGtvGRGGGPthlAILsQPpdTinGsIRVTvQGEVIefcfGeehlCfqT lqrft CAPP_MEDSA : 637- 685: mfhgr GGtvGRGGGPthlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAPP_MYCLE : 602- 650: lfhgr GGtvGRGGGPsyqAILaQPpgAvnGsLRLTeQGEVIaakyAepqiArrN leslv CAPP_SOLTU : 637- 685: mfhgr GGtvGRGGGPahlAILsQPpeTihGsLRVTvQGEVIeqsfGeehlCfrT lqrft CAPP_TOBAC : 636- 684: mfhgr GGtvGRGGGPthlAILsQPpdTiqGsLRVTvQGEVIeqsfGeehlCfrT lqrft O 15: 86.6065 20( 20) L-R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Occurences: 20(20) CAP1_FLAPR : 767- 797: ggies LRAIPWIFAWtQTRFhLPVWlGfGAAFkhaI kkdsk CAP1_FLATR : 767- 797: ggies LRAIPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP1_MESCR : 767- 797: ggies LRAIPWIFAWtQTRFhLPVWlGvGGALkhvL ekdir CAP1_SACHY : 767- 797: agies LRAIPWIFAWtQTRFhLPVWlGfGAAFkhvL dkdir CAP1_SORVU : 762- 792: ggies LRAIPWIFAWtQTRFhLPVWlGfGAAIkhiM qkdir CAP1_SOYBN : 768- 798: ggiet LRAIPWIFAWtQTRFhLPVWlGfGAAFkhvI ekdvr CAP2_FLATR : 766- 796: ggies LRAIPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP2_MESCR : 759- 789: ggies LRAIPWIFAWtQTRFhLPVWlGfGAAFgyaI qkdvk CAP2_SORVU : 761- 791: ggies LRAIPWIFAWtQTRFhLPVWlGfGGAFkhvL qkdir CAP3_SORVU : 763- 793: ggitt LRAIPWIFSWtQTRFhLPVWlGvGAAFkwaI dkdik CAPP_ANANI : 867- 897: rdlgs LRAIPWVFSWtQSRFlLPSWyGvGTALqefL qerpe CAPP_ANASP : 796- 826: kdlss LRAIPWVFSWtQTRFlLPSWyGvGTALqefF neepe CAPP_CORGL : 746- 776: ssved LRAIPWVLSWsQSRVmLPGWfGvGTALeqwI gegeq CAPP_ECOLI : 712- 742: ggves LRAIPWIFAWtQNRLmLPAWlGaGTALqkvV edgkq CAPP_HAEIN : 711- 741: ggves LRAIPWIFAWmQNRLmLPAWlGaGAAIrqvI eqgkg CAPP_MAIZE : 772- 802: ggitt LRAIPWIFSWtQTRFhLPVWlGvGAAFkfaI dkdvr CAPP_MEDSA : 767- 797: ggiet LRAIPWIFAWtQTRFhLPVWlGfGAAFrqvV qkdvk CAPP_MYCLE : 734- 764: tsiad LRAIPWVLAWsQSRVmLPGWyGtGSAFqqwV aagpe CAPP_SOLTU : 767- 797: ggies LRAIPWIFAWtQTRFhLPVWlGfGAAFkyaI ekdik CAPP_TOBAC : 766- 796: ggies LRAIPWIFAWtQTRFhLPVWlGfGAAFkyaI dkdik P 16: 82.4364 20( 20) R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Occurences: 20(20) CAP1_FLAPR : 768- 797: giesl RAIPWIFAWtQTRFhLPVWlGfGAAFkhaI kkdsk CAP1_FLATR : 768- 797: giesl RAIPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP1_MESCR : 768- 797: giesl RAIPWIFAWtQTRFhLPVWlGvGGALkhvL ekdir CAP1_SACHY : 768- 797: giesl RAIPWIFAWtQTRFhLPVWlGfGAAFkhvL dkdir CAP1_SORVU : 763- 792: giesl RAIPWIFAWtQTRFhLPVWlGfGAAIkhiM qkdir CAP1_SOYBN : 769- 798: gietl RAIPWIFAWtQTRFhLPVWlGfGAAFkhvI ekdvr CAP2_FLATR : 767- 796: giesl RAIPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP2_MESCR : 760- 789: giesl RAIPWIFAWtQTRFhLPVWlGfGAAFgyaI qkdvk CAP2_SORVU : 762- 791: giesl RAIPWIFAWtQTRFhLPVWlGfGGAFkhvL qkdir CAP3_SORVU : 764- 793: gittl RAIPWIFSWtQTRFhLPVWlGvGAAFkwaI dkdik CAPP_ANANI : 868- 897: dlgsl RAIPWVFSWtQSRFlLPSWyGvGTALqefL qerpe CAPP_ANASP : 797- 826: dlssl RAIPWVFSWtQTRFlLPSWyGvGTALqefF neepe CAPP_CORGL : 747- 776: svedl RAIPWVLSWsQSRVmLPGWfGvGTALeqwI gegeq CAPP_ECOLI : 713- 742: gvesl RAIPWIFAWtQNRLmLPAWlGaGTALqkvV edgkq CAPP_HAEIN : 712- 741: gvesl RAIPWIFAWmQNRLmLPAWlGaGAAIrqvI eqgkg CAPP_MAIZE : 773- 802: gittl RAIPWIFSWtQTRFhLPVWlGvGAAFkfaI dkdvr CAPP_MEDSA : 768- 797: gietl RAIPWIFAWtQTRFhLPVWlGfGAAFrqvV qkdvk CAPP_MYCLE : 735- 764: siadl RAIPWVLAWsQSRVmLPGWyGtGSAFqqwV aagpe CAPP_SOLTU : 768- 797: giesl RAIPWIFAWtQTRFhLPVWlGfGAAFkyaI ekdik CAPP_TOBAC : 767- 796: giesl RAIPWIFAWtQTRFhLPVWlGfGAAFkyaI dkdik Q 17: 81.9566 20( 20) L-R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-x(0,2)-L-x(0,2)-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Occurences: 20(20) CAP1_FLAPR : 767- 797: ggies LRAIPWIFAWtQTRfhL--PVWlGfGAAFkhaI kkdsk CAP1_FLATR : 767- 797: ggies LRAIPWIFSWtQTRfhL--PVWlGfGAAFkhaI qkdsk CAP1_MESCR : 767- 797: ggies LRAIPWIFAWtQTRfhL--PVWlGvGGALkhvL ekdir CAP1_SACHY : 767- 797: agies LRAIPWIFAWtQTRfhL--PVWlGfGAAFkhvL dkdir CAP1_SORVU : 762- 792: ggies LRAIPWIFAWtQTRfhL--PVWlGfGAAIkhiM qkdir CAP1_SOYBN : 768- 798: ggiet LRAIPWIFAWtQTRfhL--PVWlGfGAAFkhvI ekdvr CAP2_FLATR : 766- 796: ggies LRAIPWIFSWtQTRfhL--PVWlGfGAAFkhaI qkdsk CAP2_MESCR : 759- 789: ggies LRAIPWIFAWtQTRfhL--PVWlGfGAAFgyaI qkdvk CAP2_SORVU : 761- 791: ggies LRAIPWIFAWtQTRfhL--PVWlGfGGAFkhvL qkdir CAP3_SORVU : 763- 793: ggitt LRAIPWIFSWtQTRfhL--PVWlGvGAAFkwaI dkdik CAPP_ANANI : 867- 897: rdlgs LRAIPWVFSWtQSRflL--PSWyGvGTALqefL qerpe CAPP_ANANI : 867- 897: rdlgs LRAIPWVFSWtQSRf-Ll-PSWyGvGTALqefL qerpe CAPP_ANASP : 796- 826: kdlss LRAIPWVFSWtQTRflL--PSWyGvGTALqefF neepe CAPP_ANASP : 796- 826: kdlss LRAIPWVFSWtQTRf-Ll-PSWyGvGTALqefF neepe CAPP_CORGL : 746- 776: ssved LRAIPWVLSWsQSRvmL--PGWfGvGTALeqwI gegeq CAPP_ECOLI : 712- 742: ggves LRAIPWIFAWtQNRlmL--PAWlGaGTALqkvV edgkq CAPP_ECOLI : 712- 742: ggves LRAIPWIFAWtQNR--LmlPAWlGaGTALqkvV edgkq CAPP_HAEIN : 711- 741: ggves LRAIPWIFAWmQNRlmL--PAWlGaGAAIrqvI eqgkg CAPP_HAEIN : 711- 741: ggves LRAIPWIFAWmQNR--LmlPAWlGaGAAIrqvI eqgkg CAPP_MAIZE : 772- 802: ggitt LRAIPWIFSWtQTRfhL--PVWlGvGAAFkfaI dkdvr CAPP_MEDSA : 767- 797: ggiet LRAIPWIFAWtQTRfhL--PVWlGfGAAFrqvV qkdvk CAPP_MYCLE : 734- 764: tsiad LRAIPWVLAWsQSRvmL--PGWyGtGSAFqqwV aagpe CAPP_SOLTU : 767- 797: ggies LRAIPWIFAWtQTRfhL--PVWlGfGAAFkyaI ekdik CAPP_TOBAC : 766- 796: ggies LRAIPWIFAWtQTRfhL--PVWlGfGAAFkyaI dkdik R 18: 78.2664 20( 20) A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Occurences: 20(20) CAP1_FLAPR : 769- 797: ieslr AIPWIFAWtQTRFhLPVWlGfGAAFkhaI kkdsk CAP1_FLATR : 769- 797: ieslr AIPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP1_MESCR : 769- 797: ieslr AIPWIFAWtQTRFhLPVWlGvGGALkhvL ekdir CAP1_SACHY : 769- 797: ieslr AIPWIFAWtQTRFhLPVWlGfGAAFkhvL dkdir CAP1_SORVU : 764- 792: ieslr AIPWIFAWtQTRFhLPVWlGfGAAIkhiM qkdir CAP1_SOYBN : 770- 798: ietlr AIPWIFAWtQTRFhLPVWlGfGAAFkhvI ekdvr CAP2_FLATR : 768- 796: ieslr AIPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP2_MESCR : 761- 789: ieslr AIPWIFAWtQTRFhLPVWlGfGAAFgyaI qkdvk CAP2_SORVU : 763- 791: ieslr AIPWIFAWtQTRFhLPVWlGfGGAFkhvL qkdir CAP3_SORVU : 765- 793: ittlr AIPWIFSWtQTRFhLPVWlGvGAAFkwaI dkdik CAPP_ANANI : 869- 897: lgslr AIPWVFSWtQSRFlLPSWyGvGTALqefL qerpe CAPP_ANASP : 798- 826: lsslr AIPWVFSWtQTRFlLPSWyGvGTALqefF neepe CAPP_CORGL : 748- 776: vedlr AIPWVLSWsQSRVmLPGWfGvGTALeqwI gegeq CAPP_ECOLI : 714- 742: veslr AIPWIFAWtQNRLmLPAWlGaGTALqkvV edgkq CAPP_HAEIN : 713- 741: veslr AIPWIFAWmQNRLmLPAWlGaGAAIrqvI eqgkg CAPP_MAIZE : 774- 802: ittlr AIPWIFSWtQTRFhLPVWlGvGAAFkfaI dkdvr CAPP_MEDSA : 769- 797: ietlr AIPWIFAWtQTRFhLPVWlGfGAAFrqvV qkdvk CAPP_MYCLE : 736- 764: iadlr AIPWVLAWsQSRVmLPGWyGtGSAFqqwV aagpe CAPP_SOLTU : 769- 797: ieslr AIPWIFAWtQTRFhLPVWlGfGAAFkyaI ekdik CAPP_TOBAC : 768- 796: ieslr AIPWIFAWtQTRFhLPVWlGfGAAFkyaI dkdik S 19: 77.7866 20( 20) R-A-I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-x(0,2)-L-x(0,2)-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Occurences: 20(20) CAP1_FLAPR : 768- 797: giesl RAIPWIFAWtQTRfhL--PVWlGfGAAFkhaI kkdsk CAP1_FLATR : 768- 797: giesl RAIPWIFSWtQTRfhL--PVWlGfGAAFkhaI qkdsk CAP1_MESCR : 768- 797: giesl RAIPWIFAWtQTRfhL--PVWlGvGGALkhvL ekdir CAP1_SACHY : 768- 797: giesl RAIPWIFAWtQTRfhL--PVWlGfGAAFkhvL dkdir CAP1_SORVU : 763- 792: giesl RAIPWIFAWtQTRfhL--PVWlGfGAAIkhiM qkdir CAP1_SOYBN : 769- 798: gietl RAIPWIFAWtQTRfhL--PVWlGfGAAFkhvI ekdvr CAP2_FLATR : 767- 796: giesl RAIPWIFSWtQTRfhL--PVWlGfGAAFkhaI qkdsk CAP2_MESCR : 760- 789: giesl RAIPWIFAWtQTRfhL--PVWlGfGAAFgyaI qkdvk CAP2_SORVU : 762- 791: giesl RAIPWIFAWtQTRfhL--PVWlGfGGAFkhvL qkdir CAP3_SORVU : 764- 793: gittl RAIPWIFSWtQTRfhL--PVWlGvGAAFkwaI dkdik CAPP_ANANI : 868- 897: dlgsl RAIPWVFSWtQSRflL--PSWyGvGTALqefL qerpe CAPP_ANANI : 868- 897: dlgsl RAIPWVFSWtQSRf-Ll-PSWyGvGTALqefL qerpe CAPP_ANASP : 797- 826: dlssl RAIPWVFSWtQTRflL--PSWyGvGTALqefF neepe CAPP_ANASP : 797- 826: dlssl RAIPWVFSWtQTRf-Ll-PSWyGvGTALqefF neepe CAPP_CORGL : 747- 776: svedl RAIPWVLSWsQSRvmL--PGWfGvGTALeqwI gegeq CAPP_ECOLI : 713- 742: gvesl RAIPWIFAWtQNRlmL--PAWlGaGTALqkvV edgkq CAPP_ECOLI : 713- 742: gvesl RAIPWIFAWtQNR--LmlPAWlGaGTALqkvV edgkq CAPP_HAEIN : 712- 741: gvesl RAIPWIFAWmQNRlmL--PAWlGaGAAIrqvI eqgkg CAPP_HAEIN : 712- 741: gvesl RAIPWIFAWmQNR--LmlPAWlGaGAAIrqvI eqgkg CAPP_MAIZE : 773- 802: gittl RAIPWIFSWtQTRfhL--PVWlGvGAAFkfaI dkdvr CAPP_MEDSA : 768- 797: gietl RAIPWIFAWtQTRfhL--PVWlGfGAAFrqvV qkdvk CAPP_MYCLE : 735- 764: siadl RAIPWVLAWsQSRvmL--PGWyGtGSAFqqwV aagpe CAPP_SOLTU : 768- 797: giesl RAIPWIFAWtQTRfhL--PVWlGfGAAFkyaI ekdik CAPP_TOBAC : 767- 796: giesl RAIPWIFAWtQTRfhL--PVWlGfGAAFkyaI dkdik T 20: 74.0963 20( 20) I-P-W-[IV]-[FL]-[AS]-W-x-Q-[NST]-R-[FLV]-x-L-P-[AGSV]-W-x-G-x-G-[AGST]-A-[FIL]-x(3)-[FILMV] Occurences: 20(20) CAP1_FLAPR : 770- 797: eslra IPWIFAWtQTRFhLPVWlGfGAAFkhaI kkdsk CAP1_FLATR : 770- 797: eslra IPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP1_MESCR : 770- 797: eslra IPWIFAWtQTRFhLPVWlGvGGALkhvL ekdir CAP1_SACHY : 770- 797: eslra IPWIFAWtQTRFhLPVWlGfGAAFkhvL dkdir CAP1_SORVU : 765- 792: eslra IPWIFAWtQTRFhLPVWlGfGAAIkhiM qkdir CAP1_SOYBN : 771- 798: etlra IPWIFAWtQTRFhLPVWlGfGAAFkhvI ekdvr CAP2_FLATR : 769- 796: eslra IPWIFSWtQTRFhLPVWlGfGAAFkhaI qkdsk CAP2_MESCR : 762- 789: eslra IPWIFAWtQTRFhLPVWlGfGAAFgyaI qkdvk CAP2_SORVU : 764- 791: eslra IPWIFAWtQTRFhLPVWlGfGGAFkhvL qkdir CAP3_SORVU : 766- 793: ttlra IPWIFSWtQTRFhLPVWlGvGAAFkwaI dkdik CAPP_ANANI : 870- 897: gslra IPWVFSWtQSRFlLPSWyGvGTALqefL qerpe CAPP_ANASP : 799- 826: sslra IPWVFSWtQTRFlLPSWyGvGTALqefF neepe CAPP_CORGL : 749- 776: edlra IPWVLSWsQSRVmLPGWfGvGTALeqwI gegeq CAPP_ECOLI : 715- 742: eslra IPWIFAWtQNRLmLPAWlGaGTALqkvV edgkq CAPP_HAEIN : 714- 741: eslra IPWIFAWmQNRLmLPAWlGaGAAIrqvI eqgkg CAPP_MAIZE : 775- 802: ttlra IPWIFSWtQTRFhLPVWlGvGAAFkfaI dkdvr CAPP_MEDSA : 770- 797: etlra IPWIFAWtQTRFhLPVWlGfGAAFrqvV qkdvk CAPP_MYCLE : 737- 764: adlra IPWVLAWsQSRVmLPGWyGtGSAFqqwV aagpe CAPP_SOLTU : 770- 797: eslra IPWIFAWtQTRFhLPVWlGfGAAFkyaI ekdik CAPP_TOBAC : 769- 796: eslra IPWIFAWtQTRFhLPVWlGfGAAFkyaI dkdik Number of patterns evaluated by Pratt:73649 Total running time: 213 seconds