------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 8 sequences from file OSTEOPONTIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 8 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename OSTEOPONTIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: OSTK_BOVIN 277 OSTP_BOVIN 278 OSTP_CHICK 264 OSTP_HUMAN 314 OSTP_MOUSE 294 OSTP_PIG 303 OSTP_RABIT 311 OSTP_RAT 317 Pratt run started at Thu Feb 6 20:26:36 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 36.5305 8( 8) Q-x(3)-S-S-E-E-x(2)-D-x(2,3)-Q-x(3)-P-x(2,3)-S 2: 36.5305 8( 8) L-x(1,2)-Q-x(3)-S-S-E-E-x(2)-D-x(2,3)-Q-x(3)-P 3: 32.3604 8( 8) S-S-E-E-x(2)-D-x(2,3)-Q-x(3)-P-x(2,3)-S 4: 28.1904 8( 8) S-x(3,4)-E-x(2,3)-D-x(2)-D-D-x-D-x(4)-D 5: 28.1904 8( 8) S-E-E-x(2)-D-x(2,3)-Q-x(3)-P-x(2,3)-S 6: 28.1904 8( 8) Q-x-Q-x(2)-L-x(2,3)-Q-x(4)-S-x-E-x(2,3)-D 7: 27.6904 8( 8) D-x(4)-D-D-x-D-x(2)-D-x(3,5)-S-x(0,1)-E 8: 27.6904 8( 8) P-x(1,2)-S-x-E-x(3,5)-D-D-x-D-x(3)-D 9: 27.6904 8( 8) Q-x(3)-P-x(2,3)-S-x(1,3)-E-x(5)-D-D-x-D 10: 24.5203 8( 8) S-x(0,1)-S-x-E-x(5)-Q-x(2)-L-x-S 11: 24.0203 14( 8) S-x(4)-D-x(2,3)-Q-x(0,1)-T-L-x-S 12: 24.0203 12( 8) D-x(4,5)-D-x(2)-D-x(0,1)-S-x(2)-S-x(3)-D 13: 24.0203 8( 8) S-x-E-L-x(4)-S-x(0,1)-E-x(0,1)-N 14: 24.0203 11( 8) D-x(1,2)-D-x(0,1)-S-x(3)-D-E-S 15: 24.0203 11( 8) D-x(2,3)-D-x(0,1)-S-x(3)-D-E-S 16: 24.0203 19( 8) D-x(4,5)-D-x(0,1)-S-x(3)-D-E-S 17: 24.0203 15( 8) D-x(2)-D-D-x-D-x(2,3)-D-x(4,5)-D 18: 24.0203 12( 8) D-x(2)-D-D-x(0,1)-D-x-D-x(2,3)-D 19: 24.0203 9( 8) E-x(5)-D-D-x(0,1)-D-x(0,1)-D-x-D 20: 24.0203 10( 8) D-x(3,4)-Q-x(3,4)-P-x(5)-S-x-E-x(2)-D Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 106.3267 8( 8) L-x(1,2)-Q-[NT]-x(2)-S-S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-[DS]-x-[PS]-x-[EK]-[DS]-x-[DE]-x(2)-D-D-x-D-[DE]-[DE]-[DE]-[DN]-[DEN]-[DGS]-x(3)-[ADENS]-[EQRS]-[DENS]-[DEST] B 2: 98.7885 8( 8) Q-[NT]-x(2)-S-S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x-[ES]-[DQS]-x-[ADE]-x(2)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST] C 3: 93.3320 8( 8) S-S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x-[ES]-[DQS]-x-[ADE]-x(2)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST]-x(3)-[ADENS] D 4: 89.1620 8( 8) S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x-[ES]-[DQS]-x-[ADE]-x(2)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST]-x(3)-[ADENS] E 5: 88.7044 8( 8) Q-x-Q-[NT]-x-L-x(2,3)-Q-[NQ]-[AST]-x(2)-S-[ES]-E-x(2,3)-D-x(2)-[EQ]-[ENQ]-[PT]-x(2)-[PS]-x(3)-[ES]-x(2)-[DEQ]-x(2)-[DV]-D-x-D-[DE]-[DE]-[DE]-D-[DEN]-[DGS] F 6: 87.7423 8( 8) D-x(3,4)-Q-x(3,4)-P-[DQS]-x-[APST]-x(2)-S-[EPQ]-E-x-[DNTV]-D-x-[DK]-[DQ]-[DEN]-[DT]-x-[NP]-[DS]-x-[NS]-x-[ET]-[DS]-x-[DES]-x(2)-[DV]-[DV]-x-D-x-[DEP]-[DET]-[DE]-[ADEN]-[DGPS] G 7: 73.7276 8( 8) S-x(0,1)-S-[EQ]-E-x(2)-[DQ]-x(2)-Q-[EN]-[DT]-L-[AP]-S-x-[QS]-x-[ET]-x(2)-[DES]-x(2)-[DE]-[DN]-x-D-x-[DEP]-[DE]-[DQ]-[DENP]-[DGS] H 8: 62.9916 8( 8) Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x(1,3)-E-[ADS]-x-[DE]-x(2)-D-D-x-D-[DEN]-[DE]-[DES]-[DN]-[DEN]-[DGST]-x(3)-[ADENS]-[EQRS] I 9: 62.5247 12( 8) S-[AES]-[ES]-[AET]-x-D-x(2,3)-Q-x(0,1)-T-L-[EP]-S-x-[ES]-x-[AE]-[DES]-x-[DER]-x(3)-[DE]-x-[DN]-[DE]-x-[DET]-[DR] J 10: 62.5015 8( 8) E-[ADS]-x-[DE]-x(2)-D-D-x(0,1)-D-x(0,1)-D-[DEN]-D-[DNS]-[DEGNS]-x(2)-[DV]-x(2)-[DENQRS]-[DENS]-x(2)-[DST]-x(3)-[DST]-x-[ADPS]-x(2)-[ADST]-x(2)-[DNS]-[DERS]-x(4)-[DEGST]-x(3)-[DEQS] K 11: 51.8024 8( 8) P-x(1,2)-S-x-E-x(3,5)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST]-x(3)-[ADENS] L 12: 49.0597 10( 8) D-x(2)-D-D-x(0,1)-D-[DEN]-D-x(2,3)-D-x(3)-[ADNST]-x-[DERS]-x(2)-[ADNST]-[DES]-x(2)-[DSTV]-[ADE]-x(4)-[DPS]-x(4)-[DES]-[DENST]-x(3)-[DEGQS] M 13: 48.8623 10( 8) D-x(2)-D-D-x-D-x(2,3)-D-x(4,5)-D-[ENST]-x-[DNSV]-[AEST]-[DEN]-x(3)-[ADE]-[ADPST]-x(2)-[DPST]-x(2)-[DNS]-[DEHR]-x(4)-[ADGS]-x-[EGQST] N 14: 44.1075 14( 8) D-x(4,5)-D-x(0,1)-S-x(2)-[ST]-D-E-S-[DH]-[EQ]-x(3)-[DPS]-x-[DEP]-x-[DEPT]-x(3)-[TV] O 15: 39.5748 11( 8) D-x(1,2)-D-x(0,1)-S-x(2)-[ST]-D-E-S-[DH]-x(4)-[ADPS]-x-[DEPT]-x(2)-[ADTV]-x(2)-[PTV] P 16: 39.5748 11( 8) D-x(2,3)-D-x(0,1)-S-x(2)-[ST]-D-E-S-[DH]-x(4)-[ADPS]-x-[DEPT]-x(2)-[ADTV]-x(2)-[PTV] Q 17: 39.3703 8( 8) S-x(3,4)-E-x(2,3)-D-x(2)-D-D-x-D-[DEN]-[DEN]-x(2)-D-[DGSTV]-x(3)-[ADENS]-[EQRS] R 18: 39.1779 8( 8) D-x(2)-[DET]-[DST]-D-D-x-D-x(2)-D-x(3,5)-S-x(0,1)-E-[ADSV]-x(2)-[ADNSV]-x(3)-[DEST] S 19: 38.2263 8( 8) L-x(1,2)-Q-[NT]-x(2)-S-S-E-E-x-[ADN]-D-x(2,3)-Q T 20: 36.3077 8( 8) S-[HR]-E-L-[ADE]-[QS]-x-[QS]-S-x(0,1)-E-x(0,1)-N Best patterns with alignements: fitness hits(seqs) Pattern A 1: 106.3267 8( 8) L-x(1,2)-Q-[NT]-x(2)-S-S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-[DS]-x-[PS]-x-[EK]-[DS]-x-[DE]-x(2)-D-D-x-D-[DE]-[DE]-[DE]-[DN]-[DEN]-[DGS]-x(3)-[ADENS]-[EQRS]-[DENS]-[DEST] Occurences: 8(8) OSTK_BOVIN : 55- 102: qkqtf LapQNsvSSEEtDDnk-QNTLPSkSnEDpEqtDDlDDDDDNSqdvNSND sddae OSTP_BOVIN : 55- 102: qkqtf LtpQNsvSSEEtDDnk-QNTLPSkSnESpEqtDDlDDDDDNSqdvNSND sddae OSTP_CHICK : 68- 115: ndlas Lq-QThySSEEnADvpeQPDFPDiPsKSqEavDDdDDDDNDSndtDESD evvtd OSTP_HUMAN : 55- 102: qkqnl LapQNavSSEEtNDfk-QETLPSkSnEShDhmDDmDDEDDDDhvdSQDS idsnd OSTP_MOUSE : 54- 101: qkqnl LapQNavSSEEkDDfk-QETLPSnSnEShDhmDDdDDDDDDDgdhAESE dsvds OSTP_PIG : 55- 102: qkqtf LapQNtiSSEEtDDfk-QETLPSkSnESpEqtDDvDDDDDEDhvdSRDT dseea OSTP_RABIT : 55- 102: qkqnl LtpQNamSSEEkDDlk-QETLPSkSiEShDhmDDiDEDEDDDhvdNRDS nesdd OSTP_RAT : 55- 102: qkqnl LapQNsvSSEEtDDfk-QETLPSnSnEShDhmDDdDDDDDDGdhaESED svnsd B 2: 98.7885 8( 8) Q-[NT]-x(2)-S-S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x-[ES]-[DQS]-x-[ADE]-x(2)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST] Occurences: 8(8) OSTK_BOVIN : 58- 102: tflap QNsvSSEEtDDnk-QNTLPsk-SnEDpEqtDDlDDDDDNSqdvNSND sddae OSTP_BOVIN : 58- 102: tfltp QNsvSSEEtDDnk-QNTLPsk-SnESpEqtDDlDDDDDNSqdvNSND sddae OSTP_CHICK : 70- 116: laslq QThySSEEnADvpeQPDFPdipSkSQeAvdDDdDDDNDSNdtdESDE vvtdf OSTP_HUMAN : 58- 102: nllap QNavSSEEtNDfk-QETLPsk-SnEShDhmDDmDDEDDDDhvdSQDS idsnd OSTP_MOUSE : 57- 101: nllap QNavSSEEkDDfk-QETLPsn-SnEShDhmDDdDDDDDDDgdhAESE dsvds OSTP_PIG : 58- 102: tflap QNtiSSEEtDDfk-QETLPsk-SnESpEqtDDvDDDDDEDhvdSRDT dseea OSTP_RABIT : 58- 102: nlltp QNamSSEEkDDlk-QETLPsk-SiEShDhmDDiDEDEDDDhvdNRDS nesdd OSTP_RAT : 58- 102: nllap QNsvSSEEtDDfk-QETLPsn-SnEShDhmDDdDDDDDDGdhaESED svnsd C 3: 93.3320 8( 8) S-S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x-[ES]-[DQS]-x-[ADE]-x(2)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST]-x(3)-[ADENS] Occurences: 8(8) OSTK_BOVIN : 62- 106: pqnsv SSEEtDDnk-QNTLPsk-SnEDpEqtDDlDDDDDNSqdvNSNDsddA ettdd OSTP_BOVIN : 62- 106: pqnsv SSEEtDDnk-QNTLPsk-SnESpEqtDDlDDDDDNSqdvNSNDsddA ettdd OSTP_CHICK : 74- 120: qqthy SSEEnADvpeQPDFPdipSkSQeAvdDDdDDDNDSNdtdESDEvvtD fptea OSTP_HUMAN : 62- 106: pqnav SSEEtNDfk-QETLPsk-SnEShDhmDDmDDEDDDDhvdSQDSidsN dsddv OSTP_MOUSE : 61- 105: pqnav SSEEkDDfk-QETLPsn-SnEShDhmDDdDDDDDDDgdhAESEdsvD sdesd OSTP_PIG : 62- 106: pqnti SSEEtDDfk-QETLPsk-SnESpEqtDDvDDDDDEDhvdSRDTdseE adhad OSTP_RABIT : 62- 106: pqnam SSEEkDDlk-QETLPsk-SiEShDhmDDiDEDEDDDhvdNRDSnesD dadhp OSTP_RAT : 62- 106: pqnsv SSEEtDDfk-QETLPsn-SnEShDhmDDdDDDDDDGdhaESEDsvnS desde D 4: 89.1620 8( 8) S-E-E-x-[ADN]-D-x(2,3)-Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x-[ES]-[DQS]-x-[ADE]-x(2)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST]-x(3)-[ADENS] Occurences: 8(8) OSTK_BOVIN : 63- 106: qnsvs SEEtDDnk-QNTLPsk-SnEDpEqtDDlDDDDDNSqdvNSNDsddA ettdd OSTP_BOVIN : 63- 106: qnsvs SEEtDDnk-QNTLPsk-SnESpEqtDDlDDDDDNSqdvNSNDsddA ettdd OSTP_CHICK : 75- 120: qthys SEEnADvpeQPDFPdipSkSQeAvdDDdDDDNDSNdtdESDEvvtD fptea OSTP_HUMAN : 63- 106: qnavs SEEtNDfk-QETLPsk-SnEShDhmDDmDDEDDDDhvdSQDSidsN dsddv OSTP_MOUSE : 62- 105: qnavs SEEkDDfk-QETLPsn-SnEShDhmDDdDDDDDDDgdhAESEdsvD sdesd OSTP_PIG : 63- 106: qntis SEEtDDfk-QETLPsk-SnESpEqtDDvDDDDDEDhvdSRDTdseE adhad OSTP_RABIT : 63- 106: qnams SEEkDDlk-QETLPsk-SiEShDhmDDiDEDEDDDhvdNRDSnesD dadhp OSTP_RAT : 63- 106: qnsvs SEEtDDfk-QETLPsn-SnEShDhmDDdDDDDDDGdhaESEDsvnS desde E 5: 88.7044 8( 8) Q-x-Q-[NT]-x-L-x(2,3)-Q-[NQ]-[AST]-x(2)-S-[ES]-E-x(2,3)-D-x(2)-[EQ]-[ENQ]-[PT]-x(2)-[PS]-x(3)-[ES]-x(2)-[DEQ]-x(2)-[DV]-D-x-D-[DE]-[DE]-[DE]-D-[DEN]-[DGS] Occurences: 8(8) OSTK_BOVIN : 50- 95: kpdps QkQTfLap-QNSvsSEEtd-DnkQNTlpSksnEdpEqtDDlDDDDDNS qdvns OSTP_BOVIN : 50- 95: kpdps QkQTfLtp-QNSvsSEEtd-DnkQNTlpSksnEspEqtDDlDDDDDNS qdvns OSTP_CHICK : 60- 107: qehlq QtQNdLaslQQThySSEenaDvpEQPdfPdipSksQeaVDdDDDDDND sndtd OSTP_HUMAN : 50- 95: npdps QkQNlLap-QNAvsSEEtn-DfkQETlpSksnEshDhmDDmDDEDDDD hvdsq OSTP_MOUSE : 49- 94: vpdps QkQNlLap-QNAvsSEEkd-DfkQETlpSnsnEshDhmDDdDDDDDDD gdhae OSTP_PIG : 50- 95: kpdps QkQTfLap-QNTisSEEtd-DfkQETlpSksnEspEqtDDvDDDDDED hvdsr OSTP_RABIT : 50- 95: npdps QkQNlLtp-QNAmsSEEkd-DlkQETlpSksiEshDhmDDiDEDEDDD hvdnr OSTP_RAT : 50- 95: kpdps QkQNlLap-QNSvsSEEtd-DfkQETlpSnsnEshDhmDDdDDDDDDG dhaes F 6: 87.7423 8( 8) D-x(3,4)-Q-x(3,4)-P-[DQS]-x-[APST]-x(2)-S-[EPQ]-E-x-[DNTV]-D-x-[DK]-[DQ]-[DEN]-[DT]-x-[NP]-[DS]-x-[NS]-x-[ET]-[DS]-x-[DES]-x(2)-[DV]-[DV]-x-D-x-[DEP]-[DET]-[DE]-[ADEN]-[DGPS] Occurences: 8(8) OSTK_BOVIN : 47- 95: twlkp DpsqkQtflaPQnSvsSEEtDDnKQNTlPSkSnEDpEqtDDlDdDDDNS qdvns OSTP_BOVIN : 47- 95: iwlkp DpsqkQtfltPQnSvsSEEtDDnKQNTlPSkSnESpEqtDDlDdDDDNS qdvns OSTP_CHICK : 80- 126: seena Dvpe-Qpdf-PDiPskSQEaVDdDDDDdNDsNdTDeSdeVVtDfPTEAP vtpfn OSTP_HUMAN : 47- 95: twlnp DpsqkQnllaPQnAvsSEEtNDfKQETlPSkSnEShDhmDDmDdEDDDD hvdsq OSTP_MOUSE : 46- 94: twlvp DpsqkQnllaPQnAvsSEEkDDfKQETlPSnSnEShDhmDDdDdDDDDD gdhae OSTP_PIG : 47- 95: tllkp DpsqkQtflaPQnTisSEEtDDfKQETlPSkSnESpEqtDDvDdDDDED hvdsr OSTP_RABIT : 47- 95: twlnp DpsqkQnlltPQnAmsSEEkDDlKQETlPSkSiEShDhmDDiDeDEDDD hvdnr OSTP_RAT : 47- 95: twlkp DpsqkQnllaPQnSvsSEEtDDfKQETlPSnSnEShDhmDDdDdDDDDG dhaes G 7: 73.7276 8( 8) S-x(0,1)-S-[EQ]-E-x(2)-[DQ]-x(2)-Q-[EN]-[DT]-L-[AP]-S-x-[QS]-x-[ET]-x(2)-[DES]-x(2)-[DE]-[DN]-x-D-x-[DEP]-[DE]-[DQ]-[DENP]-[DGS] Occurences: 8(8) OSTK_BOVIN : 62- 95: pqnsv S-SEEtdDnkQNTLPSkSnEdpEqtDDlDdDDDNS qdvns OSTP_BOVIN : 62- 95: pqnsv S-SEEtdDnkQNTLPSkSnEspEqtDDlDdDDDNS qdvns OSTP_CHICK : 52- 86: qdhvd SqSQEhlQqtQNDLASlQqThySseENaDvPEQPD fpdip OSTP_HUMAN : 62- 95: pqnav S-SEEtnDfkQETLPSkSnEshDhmDDmDdEDDDD hvdsq OSTP_MOUSE : 61- 94: pqnav S-SEEkdDfkQETLPSnSnEshDhmDDdDdDDDDD gdhae OSTP_PIG : 62- 95: pqnti S-SEEtdDfkQETLPSkSnEspEqtDDvDdDDDED hvdsr OSTP_RABIT : 62- 95: pqnam S-SEEkdDlkQETLPSkSiEshDhmDDiDeDEDDD hvdnr OSTP_RAT : 62- 95: pqnsv S-SEEtdDfkQETLPSnSnEshDhmDDdDdDDDDG dhaes H 8: 62.9916 8( 8) Q-[ENP]-[DT]-[FL]-P-x(2,3)-S-x(1,3)-E-[ADS]-x-[DE]-x(2)-D-D-x-D-[DEN]-[DE]-[DES]-[DN]-[DEN]-[DGST]-x(3)-[ADENS]-[EQRS] Occurences: 8(8) OSTK_BOVIN : 71- 100: tddnk QNTLPsk-Sn--EDpEqtDDlDDDDDNSqdvNS ndsdd OSTP_BOVIN : 71- 100: tddnk QNTLPsk-Sn--ESpEqtDDlDDDDDNSqdvNS ndsdd OSTP_CHICK : 84- 116: advpe QPDFPdipSksqEAvDddDDdDNDSNDTdesDE vvtdf OSTP_HUMAN : 71- 100: tndfk QETLPsk-Sn--EShDhmDDmDDEDDDDhvdSQ dsids OSTP_MOUSE : 70- 99: kddfk QETLPsn-Sn--EShDhmDDdDDDDDDDgdhAE sedsv OSTP_PIG : 71- 100: tddfk QETLPsk-Sn--ESpEqtDDvDDDDDEDhvdSR dtdse OSTP_RABIT : 71- 100: kddlk QETLPsk-Si--EShDhmDDiDEDEDDDhvdNR dsnes OSTP_RAT : 71- 100: tddfk QETLPsn-Sn--EShDhmDDdDDDDDDGdhaES edsvn I 9: 62.5247 12( 8) S-[AES]-[ES]-[AET]-x-D-x(2,3)-Q-x(0,1)-T-L-[EP]-S-x-[ES]-x-[AE]-[DES]-x-[DER]-x(3)-[DE]-x-[DN]-[DE]-x-[DET]-[DR] Occurences: 12(8) OSTK_BOVIN : 62- 93: pqnsv SSEEtDdnkQnTLPSkSnEDpEqtdDlDDdDD nsqdv OSTK_BOVIN : 63- 93: qnsvs SEETdDnk-QnTLPSkSnEDpEqtdDlDDdDD nsqdv OSTP_BOVIN : 62- 93: pqnsv SSEEtDdnkQnTLPSkSnESpEqtdDlDDdDD nsqdv OSTP_BOVIN : 63- 93: qnsvs SEETdDnk-QnTLPSkSnESpEqtdDlDDdDD nsqdv OSTP_CHICK : 234- 264: resla SASAvDasnQ-TLESaEdAEdRhsiEnNEvTR OSTP_HUMAN : 63- 93: qnavs SEETnDfk-QeTLPSkSnEShDhmdDmDDeDD ddhvd OSTP_MOUSE : 61- 92: pqnav SSEEkDdfkQeTLPSnSnEShDhmdDdDDdDD ddgdh OSTP_PIG : 62- 93: pqnti SSEEtDdfkQeTLPSkSnESpEqtdDvDDdDD edhvd OSTP_PIG : 63- 93: qntis SEETdDfk-QeTLPSkSnESpEqtdDvDDdDD edhvd OSTP_RABIT : 62- 93: pqnam SSEEkDdlkQeTLPSkSiEShDhmdDiDEdED ddhvd OSTP_RAT : 62- 93: pqnsv SSEEtDdfkQeTLPSnSnEShDhmdDdDDdDD dgdha OSTP_RAT : 63- 93: qnsvs SEETdDfk-QeTLPSnSnEShDhmdDdDDdDD dgdha J 10: 62.5015 8( 8) E-[ADS]-x-[DE]-x(2)-D-D-x(0,1)-D-x(0,1)-D-[DEN]-D-[DNS]-[DEGNS]-x(2)-[DV]-x(2)-[DENQRS]-[DENS]-x(2)-[DST]-x(3)-[DST]-x-[ADPS]-x(2)-[ADST]-x(2)-[DNS]-[DERS]-x(4)-[DEGST]-x(3)-[DEQS] Occurences: 8(8) OSTK_BOVIN : 80- 126: psksn EDpEqtDDlD-DDDDNsqDvnSNdsDdaeTtDdpDhsDEshhsDeshQ vhfpt OSTP_BOVIN : 80- 126: psksn ESpEqtDDlD-DDDDNsqDvnSNdsDdaeTtDdpDhsDEshhsDesdE vdfpt OSTP_CHICK : 96- 141: psksq EAvDddDD-D-DNDSNdtDesDEvvTdfpTeApvTpfNRgdnaGrgdS vaygf OSTP_HUMAN : 80- 126: psksn EShDhmDDmD-DEDDDdhVdsQDsiDsndSdDvdDtdDShqsdEshhS desde OSTP_MOUSE : 79- 125: psnsn EShDhmDDdD-DDDDDdgDhaESedSvdsDeSdeShhSDesdeTvtaS tqadt OSTP_MOUSE : 79- 125: psnsn EShDhmDD-DdDDDDDdgDhaESedSvdsDeSdeShhSDesdeTvtaS tqadt OSTP_PIG : 80- 126: psksn ESpEqtDDvD-DDDDEdhVdsRDtdSeeaDhAddAdrSDeshhSdesD elvtd OSTP_RABIT : 80- 127: psksi EShDhmDDiDeDEDDDhvDnrDSneSddaDhPddShhSDeshqSdesD evtvy OSTP_RAT : 80- 125: psnsn EShDhmDD-D-DDDDDdgDhaESedSvnsDeSdeShhSDesdeSftaS tqadv K 11: 51.8024 8( 8) P-x(1,2)-S-x-E-x(3,5)-D-D-x-D-[DE]-[DE]-[DEN]-D-[DENS]-[DGNS]-x(3)-[AENS]-[EQRS]-[DENS]-[DEST]-x(3)-[ADENS] Occurences: 8(8) OSTK_BOVIN : 75- 106: kqntl PskSnEdpeqtDDlDDDDDNSqdvNSNDsddA ettdd OSTP_BOVIN : 75- 106: kqntl PskSnEspeqtDDlDDDDDNSqdvNSNDsddA ettdd OSTP_CHICK : 91- 120: dfpdi PskSqEavd--DDdDDDNDSNdtdESDEvvtD fptea OSTP_HUMAN : 75- 106: kqetl PskSnEshdhmDDmDDEDDDDhvdSQDSidsN dsddv OSTP_MOUSE : 74- 105: kqetl PsnSnEshdhmDDdDDDDDDDgdhAESEdsvD sdesd OSTP_PIG : 75- 106: kqetl PskSnEspeqtDDvDDDDDEDhvdSRDTdseE adhad OSTP_RABIT : 75- 106: kqetl PskSiEshdhmDDiDEDEDDDhvdNRDSnesD dadhp OSTP_RAT : 75- 106: kqetl PsnSnEshdhmDDdDDDDDDGdhaESEDsvnS desde L 12: 49.0597 10( 8) D-x(2)-D-D-x(0,1)-D-[DEN]-D-x(2,3)-D-x(3)-[ADNST]-x-[DERS]-x(2)-[ADNST]-[DES]-x(2)-[DSTV]-[ADE]-x(4)-[DPS]-x(4)-[DES]-[DENST]-x(3)-[DEGQS] Occurences: 10(8) OSTK_BOVIN : 86- 126: dpeqt DdlDD-DDDnsqDvnsNdSddAEttDDpdhsDeshhSDeshQ vhfpt OSTP_BOVIN : 86- 126: speqt DdlDD-DDDnsqDvnsNdSddAEttDDpdhsDeshhSDesdE vdfpt OSTP_CHICK : 99- 139: sqeav DddDDdDNDsn-DtdeSdEvvTDfpTEapvtPfnrgDNagrG dsvay OSTP_CHICK : 100- 139: qeavd DddDD-DNDsn-DtdeSdEvvTDfpTEapvtPfnrgDNagrG dsvay OSTP_HUMAN : 86- 127: shdhm DdmDDeDDDdhvDsqdSiDsnDSddVDdtddShqsdEShhsD esdel OSTP_MOUSE : 85- 125: shdhm DddDDdDDDdg-DhaeSeDsvDSdeSDeshhSdesdETvtaS tqadt OSTP_MOUSE : 85- 125: shdhm DddDD-DDDddgDhaeSeDsvDSdeSDeshhSdesdETvtaS tqadt OSTP_MOUSE : 86- 125: hdhmd DddDD-DDDdg-DhaeSeDsvDSdeSDeshhSdesdETvtaS tqadt OSTP_PIG : 87- 127: peqtd DvdDDdDEDhv-DsrdTdSeeADhaDDadrsDeshhSDesdE lvtdf OSTP_RABIT : 83- 123: siesh DhmDDiDEDed-DdhvDnRdsNEsdDAdhpdDshhsDEshqS desde OSTP_RAT : 86- 125: shdhm DddDD-DDDdg-DhaeSeDsvNSdeSDeshhSdesdESftaS tqadv M 13: 48.8623 10( 8) D-x(2)-D-D-x-D-x(2,3)-D-x(4,5)-D-[ENST]-x-[DNSV]-[AEST]-[DEN]-x(3)-[ADE]-[ADPST]-x(2)-[DPST]-x(2)-[DNS]-[DEHR]-x(4)-[ADGS]-x-[EGQST] Occurences: 10(8) OSTK_BOVIN : 87- 126: peqtd DldDDdDnsqDvnsn-DSdDAEttdDPdhSdeSHhsdeShQ vhfpt OSTP_BOVIN : 87- 126: peqtd DldDDdDnsqDvnsn-DSdDAEttdDPdhSdeSHhsdeSdE vdfpt OSTP_CHICK : 101- 139: eavdd DddDDnDsn-Dtdes-DEvVTDfptEApvTpfNRgdnaGrG dsvay OSTP_HUMAN : 89- 128: hmddm DdeDDdDhv-DsqdsiDSnDSDdvdDTddShqSDeshhSdE sdelv OSTP_MOUSE : 86- 126: hdhmd DddDDdDddgDhaeseDSvDSDesdEShhSdeSDetvtAsT qadtf OSTP_MOUSE : 87- 126: dhmdd DddDDdDdg-DhaeseDSvDSDesdEShhSdeSDetvtAsT qadtf OSTP_PIG : 86- 125: speqt DdvDDdDde-DhvdsrDTdSEEadhADdaDrsDEshhsDeS delvt OSTP_RABIT : 83- 122: siesh DhmDDiDedeDddhv-DNrDSNesdDAdhPddSHhsdeShQ sdesd OSTP_RAT : 86- 126: shdhm DddDDdDddgDhaeseDSvNSDesdEShhSdeSDesftAsT qadvl OSTP_RAT : 87- 126: hdhmd DddDDdDdg-DhaeseDSvNSDesdEShhSdeSDesftAsT qadvl N 14: 44.1075 14( 8) D-x(4,5)-D-x(0,1)-S-x(2)-[ST]-D-E-S-[DH]-[EQ]-x(3)-[DPS]-x-[DEP]-x-[DEPT]-x(3)-[TV] Occurences: 14(8) OSTK_BOVIN : 110- 138: daett DdpdhsDeShhSDESHQvhfPtDiPtiaV ftpfi OSTK_BOVIN : 111- 138: aettd Dpdhs-DeShhSDESHQvhfPtDiPtiaV ftpfi OSTP_BOVIN : 110- 138: daett DdpdhsDeShhSDESDEvdfPtDiPtiaV ftpfi OSTP_BOVIN : 111- 138: aettd Dpdhs-DeShhSDESDEvdfPtDiPtiaV ftpfi OSTP_CHICK : 101- 128: eavdd DddddnD-SndTDESDEvvtDfPtEapvT pfnrg OSTP_CHICK : 102- 128: avddd Ddddn-D-SndTDESDEvvtDfPtEapvT pfnrg OSTP_HUMAN : 115- 143: dvddt DdshqsDeShhSDESDElvtDfPtDlpaT evftp OSTP_HUMAN : 116- 143: vddtd Dshqs-DeShhSDESDElvtDfPtDlpaT evftp OSTP_MOUSE : 96- 123: ddddg DhaeseD-SvdSDESDEshhSdEsDetvT astqa OSTP_PIG : 111- 139: eadha DdadrsDeShhSDESDElvtDfPtDtpaT dvtpa OSTP_PIG : 112- 139: adhad Dadrs-DeShhSDESDElvtDfPtDtpaT dvtpa OSTP_RABIT : 106- 134: dsnes DdadhpDdShhSDESHQsdeSdEvTvypT edaat OSTP_RABIT : 107- 134: snesd DadhpdD-ShhSDESHQsdeSdEvTvypT edaat OSTP_RABIT : 107- 134: snesd Dadhp-DdShhSDESHQsdeSdEvTvypT edaat OSTP_RAT : 96- 123: ddddg DhaeseD-SvnSDESDEshhSdEsDesfT astqa O 15: 39.5748 11( 8) D-x(1,2)-D-x(0,1)-S-x(2)-[ST]-D-E-S-[DH]-x(4)-[ADPS]-x-[DEPT]-x(2)-[ADTV]-x(2)-[PTV] Occurences: 11(8) OSTK_BOVIN : 113- 138: ttddp DhsDeShhSDESHqvhfPtDipTiaV ftpfi OSTP_BOVIN : 113- 138: ttddp DhsDeShhSDESDevdfPtDipTiaV ftpfi OSTP_CHICK : 104- 128: ddddd DdnD-SndTDESDevvtDfPteApvT pfnrg OSTP_CHICK : 105- 128: ddddd Dn-D-SndTDESDevvtDfPteApvT pfnrg OSTP_HUMAN : 112- 137: dsddv DdtDdShqSDESHhsdeSdElvTdfP tdlpa OSTP_HUMAN : 113- 137: sddvd DtdD-ShqSDESHhsdeSdElvTdfP tdlpa OSTP_HUMAN : 113- 137: sddvd Dt-DdShqSDESHhsdeSdElvTdfP tdlpa OSTP_MOUSE : 102- 126: haese DsvD-SdeSDESHhsdeSdEtvTasT qadtf OSTP_MOUSE : 107- 132: dsvds DesDeShhSDESDetvtAsTqaDtfT pivpt OSTP_PIG : 114- 139: hadda DrsDeShhSDESDelvtDfPtdTpaT dvtpa OSTP_RABIT : 109- 134: esdda DhpDdShhSDESHqsdeSdEvtVypT edaat OSTP_RAT : 107- 132: dsvns DesDeShhSDESDesftAsTqaDvlT piapt P 16: 39.5748 11( 8) D-x(2,3)-D-x(0,1)-S-x(2)-[ST]-D-E-S-[DH]-x(4)-[ADPS]-x-[DEPT]-x(2)-[ADTV]-x(2)-[PTV] Occurences: 11(8) OSTK_BOVIN : 113- 138: ttddp Dhs-DeShhSDESHqvhfPtDipTiaV ftpfi OSTP_BOVIN : 113- 138: ttddp Dhs-DeShhSDESDevdfPtDipTiaV ftpfi OSTP_CHICK : 103- 128: vdddd DddnD-SndTDESDevvtDfPteApvT pfnrg OSTP_CHICK : 104- 128: ddddd Ddn-D-SndTDESDevvtDfPteApvT pfnrg OSTP_HUMAN : 112- 137: dsddv DdtdD-ShqSDESHhsdeSdElvTdfP tdlpa OSTP_HUMAN : 112- 137: dsddv Ddt-DdShqSDESHhsdeSdElvTdfP tdlpa OSTP_HUMAN : 113- 137: sddvd Dtd-D-ShqSDESHhsdeSdElvTdfP tdlpa OSTP_MOUSE : 102- 126: haese Dsv-D-SdeSDESHhsdeSdEtvTasT qadtf OSTP_MOUSE : 107- 132: dsvds Des-DeShhSDESDetvtAsTqaDtfT pivpt OSTP_PIG : 114- 139: hadda Drs-DeShhSDESDelvtDfPtdTpaT dvtpa OSTP_RABIT : 109- 134: esdda DhpdD-ShhSDESHqsdeSdEvtVypT edaat OSTP_RABIT : 109- 134: esdda Dhp-DdShhSDESHqsdeSdEvtVypT edaat OSTP_RAT : 107- 132: dsvns Des-DeShhSDESDesftAsTqaDvlT piapt Q 17: 39.3703 8( 8) S-x(3,4)-E-x(2,3)-D-x(2)-D-D-x-D-[DEN]-[DEN]-x(2)-D-[DGSTV]-x(3)-[ADENS]-[EQRS] Occurences: 8(8) OSTK_BOVIN : 78- 103: tlpsk SnedpEqt-DdlDDdDDNsqDVnsnDS ddaet OSTP_BOVIN : 78- 103: tlpsk SnespEqt-DdlDDdDDNsqDVnsnDS ddaet OSTP_CHICK : 92- 116: fpdip Sksq-Eav-DddDDdDNDsnDTdesDE vvtdf OSTP_HUMAN : 76- 100: qetlp Sksn-Esh-DhmDDmDDEddDDhvdSQ dsids OSTP_MOUSE : 75- 99: qetlp Snsn-Esh-DhmDDdDDDddDDgdhAE sedsv OSTP_PIG : 78- 104: tlpsk SnespEqtdDvdDDdDEDhvDSrdtDS eeadh OSTP_RABIT : 76- 100: qetlp Sksi-Esh-DhmDDiDEDedDDhvdNR dsnes OSTP_RAT : 76- 100: qetlp Snsn-Esh-DhmDDdDDDddDGdhaES edsvn R 18: 39.1779 8( 8) D-x(2)-[DET]-[DST]-D-D-x-D-x(2)-D-x(3,5)-S-x(0,1)-E-[ADSV]-x(2)-[ADNSV]-x(3)-[DEST] Occurences: 8(8) OSTK_BOVIN : 105- 131: sndsd DaeTTDDpDhsDeshh-SdEShqVhfpT dipti OSTP_BOVIN : 105- 131: sndsd DaeTTDDpDhsDeshh-SdESdeVdfpT dipti OSTP_CHICK : 99- 124: sqeav DddDDDDnDsnDtde--SdEVvtDfptE apvtp OSTP_HUMAN : 104- 130: sqdsi DsnDSDDvDdtDdshq-SdEShhSdesD elvtd OSTP_MOUSE : 85- 109: shdhm DddDDDDdDdgDhae--S-EDsvDsdeS deshh OSTP_PIG : 87- 114: peqtd DvdDDDDeDhvDsrdtdSeEAdhAddaD rsdes OSTP_RABIT : 101- 127: hvdnr DsnESDDaDhpDdshh-SdEShqSdesD evtvy OSTP_RAT : 83- 109: snesh DhmDDDDdDddDgdhaeS-EDsvNsdeS deshh S 19: 38.2263 8( 8) L-x(1,2)-Q-[NT]-x(2)-S-S-E-E-x-[ADN]-D-x(2,3)-Q Occurences: 8(8) OSTK_BOVIN : 55- 71: qkqtf LapQNsvSSEEtDDnk-Q ntlps OSTP_BOVIN : 55- 71: qkqtf LtpQNsvSSEEtDDnk-Q ntlps OSTP_CHICK : 68- 84: ndlas Lq-QThySSEEnADvpeQ pdfpd OSTP_HUMAN : 55- 71: qkqnl LapQNavSSEEtNDfk-Q etlps OSTP_MOUSE : 54- 70: qkqnl LapQNavSSEEkDDfk-Q etlps OSTP_PIG : 55- 71: qkqtf LapQNtiSSEEtDDfk-Q etlps OSTP_RABIT : 55- 71: qkqnl LtpQNamSSEEkDDlk-Q etlps OSTP_RAT : 55- 71: qkqnl LapQNsvSSEEtDDfk-Q etlps T 20: 36.3077 8( 8) S-[HR]-E-L-[ADE]-[QS]-x-[QS]-S-x(0,1)-E-x(0,1)-N Occurences: 8(8) OSTK_BOVIN : 266- 277: lkiri SHELDSaSS-EvN OSTP_BOVIN : 267- 278: lkiri SHELDSaSS-EvN OSTP_CHICK : 193- 204: sreqd SRELAQhQSvE-N dsrpr OSTP_HUMAN : 303- 314: lkfri SHELDSaSS-EvN OSTP_MOUSE : 283- 294: lkfri SHELESsSS-EvN OSTP_PIG : 292- 303: lklrv SHELESaSS-EiN OSTP_RABIT : 300- 311: rqlrv SHELDStSS-EiN OSTP_RAT : 306- 317: lkfri SHELESsSS-EvN Number of patterns evaluated by Pratt:7359 Total running time: 4 seconds