------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 3 sequences from file OLEEI PATTERN CONSERVATION: CM: min Nr of Seqs to Match 3 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename OLEEI.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ALL1_OLEEU 145 C13_MAIZE 170 LA52_LYCES 161 Pratt run started at Thu Feb 6 20:26:02 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 60.5508 3( 3) G-x-V-Y-C-D-T-C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 2: 56.3807 3( 3) V-Y-C-D-T-C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 3: 52.2107 3( 3) Y-C-D-T-C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 4: 48.0406 3( 3) C-D-T-C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 5: 43.8706 3( 3) D-T-C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 6: 39.7005 3( 3) T-C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 7: 35.5305 3( 3) C-R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 8: 31.3604 3( 3) R-x(2)-F-x-T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 9: 24.0203 3( 3) R-x(2)-N-P-L-x(1,2)-F-x(0,1)-K 10: 23.0203 3( 3) T-x(3)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 11: 23.0203 3( 3) F-x(5)-E-x(3)-G-A-x(1,3)-L-x(1,3)-C 12: 20.8503 3( 3) S-x-R-x-D-C-x-E 13: 20.8503 3( 3) E-x(3)-G-A-x(3)-L-x-C 14: 20.3503 4( 3) S-x(1,2)-R-x-D-C-x-E 15: 19.8503 3( 3) N-P-L-x(1,2)-F-x(0,1)-K 16: 19.8503 3( 3) G-x-T-x(3)-G-x-Y-x(1,3)-L 17: 18.8503 3( 3) V-x(0,2)-T-x(3)-G-x-Y-x(1,3)-L 18: 18.8503 3( 3) E-x(3)-G-A-x(1,3)-L-x(1,3)-C 19: 16.6802 3( 3) R-x-D-C-x-E 20: 16.6802 3( 3) R-x(2)-C-K-x(4)-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 108.8490 3( 3) G-x-V-Y-C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET] B 2: 108.8490 3( 3) V-Y-C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G C 3: 108.8490 3( 3) Y-C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y D 4: 104.6789 3( 3) C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y E 5: 103.3978 3( 3) D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM] F 6: 101.3248 3( 3) E-x(3)-G-A-x-[LV]-[KR]-L-[EQ]-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H-[EK]-[EN]-[DE]-[FI]-C G 7: 99.2277 3( 3) T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM] H 8: 98.2414 3( 3) C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV] I 9: 96.1796 3( 3) E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H-[EK]-[EN]-[DE]-[FI]-C-[EQ] J 10: 94.0714 3( 3) R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV] K 11: 93.0151 3( 3) T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H-[EK]-[EN] L 12: 90.7963 3( 3) F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H M 13: 56.1867 3( 3) R-x-[AV]-N-P-L-x(1,2)-F-x(0,1)-K-x(3)-[LV]-[PQ]-x-C-x-[AEQ]-[ALV]-x(3)-L-[DG]-x(2)-[DP]-x-[DEN] N 14: 48.8309 3( 3) N-P-L-x(1,2)-F-x(0,1)-K-x(3)-[LV]-[PQ]-x-C-x-[AEQ]-[ALV]-x(3)-L-[DG]-x(2)-[DP]-x-[DEN] O 15: 36.1211 3( 3) G-x-T-[DR]-x-[DET]-G-x-Y-x(1,3)-L-x(2)-[NRS]-x-[DEH]-[EHK]-[DEN] P 16: 35.1211 3( 3) V-x(0,2)-T-[DR]-x-[DET]-G-x-Y-x(1,3)-L-x(2)-[NRS]-x-[DEH]-[EHK]-[DEN] Q 17: 29.8902 3( 3) S-[GP]-R-[EK]-D-C-x-E-x(2)-[AST] R 18: 26.1659 4( 3) S-x(1,2)-R-[EK]-D-C-x-E-x(2)-[AST] S 19: 24.4974 3( 3) R-x-[DEQ]-C-K-[DEH]-x(2)-[NST]-G T 20: 22.4959 3( 3) R-[EK]-D-C-x-E-x(2)-[AST] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 108.8490 3( 3) G-x-V-Y-C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET] Occurences: 3(3) ALL1_OLEEU : 15- 62: qfhiq GqVYCDTCRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaE glysm ALL1_OLEEU : 15- 62: qfhiq GqVYCDTCRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaE glysm C13_MAIZE : 39- 86: dyviq GrVYCDTCRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaT gtyti LA52_LYCES : 31- 78: vfdve GkVYCDTCRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkD gkykl B 2: 108.8490 3( 3) V-Y-C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G Occurences: 3(3) ALL1_OLEEU : 17- 63: hiqgq VYCDTCRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEG lysml ALL1_OLEEU : 17- 63: hiqgq VYCDTCRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEG lysml C13_MAIZE : 41- 87: viqgr VYCDTCRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTG tytie LA52_LYCES : 33- 79: dvegk VYCDTCRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDG kyklt C 3: 108.8490 3( 3) Y-C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y Occurences: 3(3) ALL1_OLEEU : 18- 65: iqgqv YCDTCRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlY smlve ALL1_OLEEU : 18- 65: iqgqv YCDTCRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlY smlve C13_MAIZE : 42- 89: iqgrv YCDTCRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtY tielk LA52_LYCES : 34- 81: vegkv YCDTCRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkY kltvn D 4: 104.6789 3( 3) C-D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y Occurences: 3(3) ALL1_OLEEU : 19- 65: qgqvy CDTCRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlY smlve ALL1_OLEEU : 19- 65: qgqvy CDTCRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlY smlve C13_MAIZE : 43- 89: qgrvy CDTCRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtY tielk LA52_LYCES : 35- 81: egkvy CDTCRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkY kltvn E 5: 103.3978 3( 3) D-T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM] Occurences: 3(3) ALL1_OLEEU : 20- 67: gqvyc DTCRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsM lverd ALL1_OLEEU : 20- 67: gqvyc DTCRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsM lverd C13_MAIZE : 44- 91: grvyc DTCRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtI elkds LA52_LYCES : 36- 83: gkvyc DTCRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkL tvngd F 6: 101.3248 3( 3) E-x(3)-G-A-x-[LV]-[KR]-L-[EQ]-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H-[EK]-[EN]-[DE]-[FI]-C Occurences: 3(3) ALL1_OLEEU : 32- 78: itels EfipGAsLRLQCKdkENGdvTfTevGyTRaEGlYsMlVerDHKNEFC eitli C13_MAIZE : 56- 102: vtnvt EyiaGAkVRLECKhfGTGklErAidGvTDaTGtYtIeLkdSHEEDIC qvvlv LA52_LYCES : 48- 94: etkls EnleGAtVKLQCRniSTEaeTfSveGvTDkDGkYkLtVngDHENDIC evtvv G 7: 99.2277 3( 3) T-C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM] Occurences: 3(3) ALL1_OLEEU : 21- 67: qvycd TCRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsM lverd ALL1_OLEEU : 21- 67: qvycd TCRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsM lverd C13_MAIZE : 45- 91: rvycd TCRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtI elkds LA52_LYCES : 37- 83: kvycd TCRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkL tvngd H 8: 98.2414 3( 3) C-R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV] Occurences: 3(3) ALL1_OLEEU : 22- 69: vycdt CRAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsMlV erdhk ALL1_OLEEU : 22- 69: vycdt CRAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsMlV erdhk C13_MAIZE : 46- 93: vycdt CRAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtIeL kdshe LA52_LYCES : 38- 85: vycdt CRVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkLtV ngdhe I 9: 96.1796 3( 3) E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H-[EK]-[EN]-[DE]-[FI]-C-[EQ] Occurences: 3(3) ALL1_OLEEU : 32- 79: itels EfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsMlVerDHKNEFCE itlis ALL1_OLEEU : 32- 79: itels EfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsMlVerDHKNEFCE itlis C13_MAIZE : 56- 103: vtnvt EyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtIeLkdSHEEDICQ vvlva LA52_LYCES : 48- 95: etkls EnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkLtVngDHENDICE vtvvk J 10: 94.0714 3( 3) R-[AV]-[GQ]-F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV] Occurences: 3(3) ALL1_OLEEU : 23- 69: ycdtc RAGFiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsMlV erdhk ALL1_OLEEU : 23- 69: ycdtc RAGFiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsMlV erdhk C13_MAIZE : 47- 93: ycdtc RAGFvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtIeL kdshe LA52_LYCES : 39- 85: ycdtc RVQFeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkLtV ngdhe K 11: 93.0151 3( 3) T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H-[EK]-[EN] Occurences: 3(3) ALL1_OLEEU : 28- 75: ragfi TeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsMlVerDHKN efcei ALL1_OLEEU : 28- 75: ragfi TeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsMlVerDHKN efcei C13_MAIZE : 52- 99: ragfv TnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtIeLkdSHEE dicqv LA52_LYCES : 44- 91: rvqfe TkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkLtVngDHEN dicev L 12: 90.7963 3( 3) F-x-T-x-[LV]-[ST]-E-x-[IL]-x-G-A-x(1,3)-L-x(1,3)-C-[KR]-x(2)-[EGS]-[NT]-[EG]-x(2)-[ET]-x-[AST]-x(2)-G-x-T-[DR]-x-[DET]-G-x-Y-x-[ILM]-x-[LV]-x(2)-[DS]-H Occurences: 3(3) ALL1_OLEEU : 26- 73: tcrag FiTeLSEfIpGAslrLq--CKdkENGdvTfTevGyTRaEGlYsMlVerDH knefc ALL1_OLEEU : 26- 73: tcrag FiTeLSEfIpGAs--LrlqCKdkENGdvTfTevGyTRaEGlYsMlVerDH knefc C13_MAIZE : 50- 97: tcrag FvTnVTEyIaGAkvrLe--CKhfGTGklErAidGvTDaTGtYtIeLkdSH eedic LA52_LYCES : 42- 89: tcrvq FeTkLSEnLeGAtvkLq--CRniSTEaeTfSveGvTDkDGkYkLtVngDH endic M 13: 56.1867 3( 3) R-x-[AV]-N-P-L-x(1,2)-F-x(0,1)-K-x(3)-[LV]-[PQ]-x-C-x-[AEQ]-[ALV]-x(3)-L-[DG]-x(2)-[DP]-x-[DEN] Occurences: 3(3) ALL1_OLEEU : 115- 144: vngtt RtVNPLgfF-KkeaLPkCaQVynkLGmyPpN m ALL1_OLEEU : 115- 144: vngtt RtVNPLg-FfKkeaLPkCaQVynkLGmyPpN m C13_MAIZE : 139- 168: isdsl RpANPLgyF-KdvpLPvCaALlkqLDsdDdD dq LA52_LYCES : 131- 160: ihnav RfANPLf-FmKaesVQgCkEAldeLGlfPlE f N 14: 48.8309 3( 3) N-P-L-x(1,2)-F-x(0,1)-K-x(3)-[LV]-[PQ]-x-C-x-[AEQ]-[ALV]-x(3)-L-[DG]-x(2)-[DP]-x-[DEN] Occurences: 3(3) ALL1_OLEEU : 118- 144: ttrtv NPLgfF-KkeaLPkCaQVynkLGmyPpN m ALL1_OLEEU : 118- 144: ttrtv NPLg-FfKkeaLPkCaQVynkLGmyPpN m C13_MAIZE : 142- 168: slrpa NPLgyF-KdvpLPvCaALlkqLDsdDdD dq LA52_LYCES : 134- 160: avrfa NPLf-FmKaesVQgCkEAldeLGlfPlE f O 15: 36.1211 3( 3) G-x-T-[DR]-x-[DET]-G-x-Y-x(1,3)-L-x(2)-[NRS]-x-[DEH]-[EHK]-[DEN] Occurences: 3(3) ALL1_OLEEU : 57- 75: tftev GyTRaEGlYsm-LveRdHKN efcei C13_MAIZE : 81- 100: eraid GvTDaTGtYtieLkdShEED icqvv LA52_LYCES : 73- 90: tfsve GvTDkDGkYk--LtvNgDHE ndice P 16: 35.1211 3( 3) V-x(0,2)-T-[DR]-x-[DET]-G-x-Y-x(1,3)-L-x(2)-[NRS]-x-[DEH]-[EHK]-[DEN] Occurences: 3(3) ALL1_OLEEU : 56- 75: vtfte VgyTRaEGlYsm-LveRdHKN efcei C13_MAIZE : 82- 100: raidg V--TDaTGtYtieLkdShEED icqvv LA52_LYCES : 74- 90: fsveg V--TDkDGkYk--LtvNgDHE ndice Q 17: 29.8902 3( 3) S-[GP]-R-[EK]-D-C-x-E-x(2)-[AST] Occurences: 3(3) ALL1_OLEEU : 85- 95: itlis SGRKDCnEipT egwak C13_MAIZE : 109- 119: vvlva SPRKDCdEvqA lrdra LA52_LYCES : 101- 111: vtvvk SPREDCkEsvS gyeka R 18: 26.1659 4( 3) S-x(1,2)-R-[EK]-D-C-x-E-x(2)-[AST] Occurences: 4(3) ALL1_OLEEU : 84- 95: eitli SsgRKDCnEipT egwak ALL1_OLEEU : 85- 95: itlis Sg-RKDCnEipT egwak C13_MAIZE : 109- 119: vvlva Sp-RKDCdEvqA lrdra LA52_LYCES : 101- 111: vtvvk Sp-REDCkEsvS gyeka S 19: 24.4974 3( 3) R-x-[DEQ]-C-K-[DEH]-x(2)-[NST]-G Occurences: 3(3) ALL1_OLEEU : 40- 49: pgasl RlQCKDkeNG dvtft C13_MAIZE : 64- 73: agakv RlECKHfgTG klera LA52_LYCES : 103- 112: vvksp ReDCKEsvSG yekar T 20: 22.4959 3( 3) R-[EK]-D-C-x-E-x(2)-[AST] Occurences: 3(3) ALL1_OLEEU : 87- 95: lissg RKDCnEipT egwak C13_MAIZE : 111- 119: lvasp RKDCdEvqA lrdra LA52_LYCES : 103- 111: vvksp REDCkEsvS gyeka Number of patterns evaluated by Pratt:2990 Total running time: 1 seconds