------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 18 sequences from file NI_HGENASE_L_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 18 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename NI_HGENASE_L_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: FRHA_METTH 404 HOXH_ALCEU 487 HOXH_NOCOP 38 MBHL_ALCEU 617 MBHL_AZOCH 601 MBHL_AZOVI 602 MBHL_BRAJA 596 MBHL_ECOLI 597 MBHL_RHILV 596 MBHL_RHOCA 597 MBHL_RHOGE 618 MBHL_WOLSU 574 MBHM_ECOLI 567 PHNL_DESFR 563 PHNL_DESGI 550 PHNL_DESVM 567 PHSL_DESBA 513 PHSL_DESBN 19 Pratt run started at Thu Feb 6 20:25:13 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 10.5102 25( 18) K-x(1,3)-D-x(1,3)-R 2: 8.3401 37( 18) I-x(4)-R 3: 8.3401 49( 18) G-K 4: 8.3401 51( 18) D-x(4)-I 5: 7.8401 56( 18) T-x(0,1)-R 6: 7.8401 50( 18) I-x(3,4)-T 7: 7.8401 81( 18) K-x(2,3)-D 8: 7.8401 75( 18) T-x(4,5)-G 9: 7.8401 105( 18) T-x(3,4)-G 10: 7.3401 88( 18) D-x(0,2)-T 11: 7.3401 103( 18) I-x(0,2)-D 12: 7.3401 72( 18) I-x(1,3)-T 13: 7.3401 85( 18) S-x(0,2)-T 14: 7.3401 73( 18) K-x(0,2)-I 15: 7.3401 170( 18) P-x(3,5)-G Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 13.3588 20( 18) T-x(3,4)-G-[HK]-x-[DEKR] B 2: 13.2064 27( 18) D-x(4)-I-[EGS]-[AGIV] C 3: 12.7831 21( 18) I-[DENS]-[GIPV]-x(2)-R D 4: 12.6806 20( 18) P-x(3,5)-G-[HKR]-x-[EKR] E 5: 10.5167 31( 18) D-x(0,2)-T-[ER] F 6: 10.5102 25( 18) K-x(1,3)-D-x(1,3)-R G 7: 10.0240 33( 18) K-x(2,3)-D-[EPST] H 8: 9.9726 32( 18) K-x(0,2)-I-[DGV] I 9: 9.7489 35( 18) T-x(4,5)-G-x(3)-[AGILV] J 10: 8.3401 49( 18) G-K K 11: 7.8401 56( 18) T-x(0,1)-R L 12: 7.8401 50( 18) I-x(3,4)-T M 13: 7.3401 103( 18) I-x(0,2)-D N 14: 7.3401 72( 18) I-x(1,3)-T O 15: 7.3401 85( 18) S-x(0,2)-T Best patterns with alignements: fitness hits(seqs) Pattern A 1: 13.3588 20( 18) T-x(3,4)-G-[HK]-x-[DEKR] Occurences: 20(18) FRHA_METTH : 9- 17: ivisp TsrqeGHaE lvmev HOXH_ALCEU : 10- 17: vidpv Trie-GHgK vvvhl HOXH_NOCOP : 10- 17: vidpv Trie-GHgK vtvhl MBHL_ALCEU : 23- 30: vvdpv Trie-GHmR cevnv MBHL_AZOCH : 23- 30: vvdpv Trie-GHmR cevnv MBHL_AZOVI : 23- 30: vvdpv Trie-GHmR cevnv MBHL_BRAJA : 24- 31: vvdpv Trie-GHmR vevnv MBHL_ECOLI : 25- 32: vvdpi Trie-GHmR cevni MBHL_RHILV : 24- 31: vvdpv Trie-GHmR vevnv MBHL_RHOCA : 24- 31: vvdpv Trie-GHmR cevnv MBHL_RHOGE : 24- 31: vvdpv Trie-GHmR cevnv MBHL_WOLSU : 10- 17: vvdpi Trie-GHlR ievvv MBHM_ECOLI : 11- 18: tidpv Trie-GHlR idcei PHNL_DESFR : 21- 28: vvdpi Trie-GHlR imvev PHNL_DESFR : 316- 324: psgvi TgrdlGKvD nvdlg PHNL_DESGI : 14- 21: vvdpi Trie-GHlR ievev PHNL_DESVM : 31- 38: vvdpv Trie-GHlR ievev PHSL_DESBA : 5- 13: sqaa TpaadGKvK isidp PHSL_DESBA : 20- 27: sidpl Trve-GHlK ievev PHSL_DESBN : 5- 13: aqaa TpaadGKkK isidt B 2: 13.2064 27( 18) D-x(4)-I-[EGS]-[AGIV] Occurences: 27(18) FRHA_METTH : 78- 85: sveai DdsldIEV pkagr HOXH_ALCEU : 7- 14: rklvi DpvtrIEG hgkvv HOXH_NOCOP : 7- 14: tklvi DpvtrIEG hgkvt MBHL_ALCEU : 20- 27: rrivv DpvtrIEG hmrce MBHL_ALCEU : 560- 567: ngspr DykgqIGA feasl MBHL_AZOCH : 20- 27: rrivv DpvtrIEG hmrce MBHL_AZOCH : 544- 551: ngtpr DhlgnIGA yeaal MBHL_AZOVI : 20- 27: rrivv DpvtrIEG hmrce MBHL_AZOVI : 545- 552: ngtpr DhlgnIGA yeaal MBHL_BRAJA : 21- 28: krivv DpvtrIEG hmrve MBHL_BRAJA : 539- 546: ngspr DpkgnIGA feasl MBHL_ECOLI : 22- 29: rrlvv DpitrIEG hmrce MBHL_ECOLI : 540- 547: naspr DpkgqIGA yeaal MBHL_ECOLI : 587- 594: hvlgd DgselISV qvr MBHL_RHILV : 21- 28: krivv DpvtrIEG hmrve MBHL_RHILV : 539- 546: ngspr DptgnIGA feasl MBHL_RHOCA : 21- 28: krivv DpvtrIEG hmrce MBHL_RHOCA : 540- 547: ngspr DskgnIGA feasl MBHL_RHOGE : 21- 28: rrivv DpvtrIEG hmrce MBHL_RHOGE : 561- 568: ngspr DakgqIGA feasl MBHL_WOLSU : 7- 14: krivv DpitrIEG hlrie MBHM_ECOLI : 8- 15: qriti DpvtrIEG hlrid PHNL_DESFR : 18- 25: gpivv DpitrIEG hlrim PHNL_DESGI : 11- 18: nkivv DpitrIEG hlrie PHNL_DESVM : 28- 35: gpivv DpvtrIEG hlrie PHSL_DESBA : 9- 16: atpaa DgkvkISI dpltr PHSL_DESBN : 9- 16: atpaa DgkkkISI dtr C 3: 12.7831 21( 18) I-[DENS]-[GIPV]-x(2)-R Occurences: 21(18) FRHA_METTH : 6- 11: seriv ISPtsR qegha HOXH_ALCEU : 6- 11: srklv IDPvtR ieghg HOXH_ALCEU : 447- 452: gmmna IEVgiR aydpc HOXH_NOCOP : 6- 11: stklv IDPvtR ieghg MBHL_ALCEU : 25- 30: dpvtr IEGhmR cevnv MBHL_AZOCH : 25- 30: dpvtr IEGhmR cevnv MBHL_AZOVI : 25- 30: dpvtr IEGhmR cevnv MBHL_BRAJA : 26- 31: dpvtr IEGhmR vevnv MBHL_ECOLI : 27- 32: dpitr IEGhmR cevni MBHL_ECOLI : 592- 597: dgsel ISVqvR MBHL_RHILV : 26- 31: dpvtr IEGhmR vevnv MBHL_RHOCA : 26- 31: dpvtr IEGhmR cevnv MBHL_RHOGE : 26- 31: dpvtr IEGhmR cevnv MBHL_WOLSU : 12- 17: dpitr IEGhlR ievvv MBHM_ECOLI : 7- 12: sqrit IDPvtR ieghl MBHM_ECOLI : 13- 18: dpvtr IEGhlR idcei PHNL_DESFR : 23- 28: dpitr IEGhlR imvev PHNL_DESGI : 16- 21: dpitr IEGhlR ievev PHNL_DESVM : 33- 38: dpvtr IEGhlR ievev PHSL_DESBA : 16- 21: kvkis IDPltR veghl PHSL_DESBN : 14- 19: dgkkk ISIdtR D 4: 12.6806 20( 18) P-x(3,5)-G-[HKR]-x-[EKR] Occurences: 20(18) FRHA_METTH : 8- 17: rivis PtsrqeGHaE lvmev HOXH_ALCEU : 8- 17: klvid PvtrieGHgK vvvhl HOXH_NOCOP : 8- 17: klvid PvtrieGHgK vtvhl MBHL_ALCEU : 21- 30: rivvd PvtrieGHmR cevnv MBHL_AZOCH : 21- 30: rivvd PvtrieGHmR cevnv MBHL_AZOVI : 21- 30: rivvd PvtrieGHmR cevnv MBHL_BRAJA : 22- 31: rivvd PvtrieGHmR vevnv MBHL_ECOLI : 23- 32: rlvvd PitrieGHmR cevni MBHL_RHILV : 22- 31: rivvd PvtrieGHmR vevnv MBHL_RHOCA : 22- 31: rivvd PvtrieGHmR cevnv MBHL_RHOGE : 22- 31: rivvd PvtrieGHmR cevnv MBHL_WOLSU : 8- 17: rivvd PitrieGHlR ievvv MBHM_ECOLI : 9- 18: ritid PvtrieGHlR idcei PHNL_DESFR : 19- 28: pivvd PitrieGHlR imvev PHNL_DESGI : 12- 21: kivvd PitrieGHlR ievev PHNL_DESVM : 29- 38: pivvd PvtrieGHlR ievev PHSL_DESBA : 6- 13: sqaat Paad--GKvK isidp PHSL_DESBA : 18- 27: kisid PltrveGHlK ievev PHSL_DESBA : 267- 276: tfllk PgvyidGKdE efdsk PHSL_DESBN : 6- 13: aqaat Paad--GKkK isidt E 5: 10.5167 31( 18) D-x(0,2)-T-[ER] Occurences: 31(18) FRHA_METTH : 160- 164: iggma DniTE larkr FRHA_METTH : 224- 228: tkfdl DrfTE vmpes HOXH_ALCEU : 7- 11: rklvi DpvTR ieghg HOXH_NOCOP : 7- 11: tklvi DpvTR ieghg MBHL_ALCEU : 20- 24: rrivv DpvTR ieghm MBHL_ALCEU : 366- 370: glhpw DgvTE pnyvl MBHL_AZOCH : 20- 24: rrivv DpvTR ieghm MBHL_AZOCH : 363- 367: glhpw DgvTE pkfel MBHL_AZOVI : 20- 24: rrivv DpvTR ieghm MBHL_AZOVI : 164- 168: pgyfr DvqTR lkkfv MBHL_AZOVI : 364- 368: glhpw DgvTE pkfel MBHL_BRAJA : 21- 25: krivv DpvTR ieghm MBHL_BRAJA : 164- 168: pgyfk DlqTR lkkfv MBHL_BRAJA : 365- 369: glhpw DgvTE pnyvl MBHL_ECOLI : 22- 26: rrlvv DpiTR ieghm MBHL_RHILV : 21- 25: krivv DpvTR ieghm MBHL_RHILV : 164- 168: pgyfk DiqTR lkkfv MBHL_RHILV : 365- 369: glhpw DgiTE phyel MBHL_RHOCA : 21- 25: krivv DpvTR ieghm MBHL_RHOCA : 265- 269: vssii DrcTE ftrnv MBHL_RHOCA : 366- 370: glhpw DgrTE pkfel MBHL_RHOGE : 21- 25: rrivv DpvTR ieghm MBHL_RHOGE : 367- 371: glhpw DgvTE pkfel MBHL_WOLSU : 7- 11: krivv DpiTR ieghl MBHL_WOLSU : 313- 317: heine DliTE eatha MBHM_ECOLI : 8- 12: qriti DpvTR ieghl PHNL_DESFR : 18- 22: gpivv DpiTR ieghl PHNL_DESGI : 11- 15: nkivv DpiTR ieghl PHNL_DESVM : 28- 32: gpivv DpvTR ieghl PHSL_DESBA : 17- 21: vkisi DplTR veghl PHSL_DESBN : 17- 19: kkisi D--TR F 6: 10.5102 25( 18) K-x(1,3)-D-x(1,3)-R Occurences: 25(18) FRHA_METTH : 220- 225: ygdrt Kf--Dld-R ftevm HOXH_ALCEU : 3- 11: sr KlviDpvtR ieghg HOXH_NOCOP : 3- 11: st KlviDpvtR ieghg MBHL_ALCEU : 59- 64: levil Kgr-Dp--R dawaf MBHL_ALCEU : 137- 142: vmsal Ka--Dpk-R tselq MBHL_AZOCH : 59- 64: levil Kgr-Dp--R dawaf MBHL_AZOVI : 59- 64: levil Kgr-Dp--R dawaf MBHL_BRAJA : 60- 65: ievil Knr-Dp--R dawaf MBHL_BRAJA : 427- 435: nksef KdpvDkflR dlnlp MBHL_ECOLI : 139- 143: vldal Ka--Dp--R ktsel MBHL_RHILV : 60- 65: ievil Knr-Dp--R dawaf MBHL_RHOCA : 60- 65: levil Kgr-Dp--R dawaf MBHL_RHOCA : 517- 522: lghwv Kik-Dg--R ienyq MBHL_RHOGE : 10- 16: etqgf Kld-Dsg-R rivvd MBHL_RHOGE : 10- 16: etqgf Kl--DdsgR rivvd MBHL_RHOGE : 10- 17: etqgf Kld-DsgrR ivvdp MBHL_RHOGE : 60- 65: levil Kgr-Dp--R dawaf MBHL_WOLSU : 46- 51: letil Kgr-Dp--R dagff MBHL_WOLSU : 243- 251: wltky KyvaDfanR ayyrd MBHM_ECOLI : 46- 51: meeiv Knr-Dp--R dawmi PHNL_DESFR : 56- 61: leiil Kgr-Dp--R daqhf PHNL_DESGI : 7- 15: emqgn KivvDpitR ieghl PHNL_DESGI : 49- 54: lemil Kgr-Dp--R daqhf PHNL_DESVM : 66- 71: leiil Kgr-Dp--R daqhf PHNL_DESVM : 304- 312: fgefp KdeyDlnsR ffkpg PHSL_DESBA : 13- 21: adgkv KisiDpltR veghl PHSL_DESBN : 13- 19: adgkk KisiDt--R G 7: 10.0240 33( 18) K-x(2,3)-D-[EPST] Occurences: 33(18) FRHA_METTH : 178- 183: rlkql KpkvDE hvelm HOXH_ALCEU : 3- 8: sr KlviDP vtrie HOXH_NOCOP : 3- 8: st KlviDP vtrie MBHL_ALCEU : 59- 63: levil Kgr-DP rdawa MBHL_ALCEU : 261- 266: rlsfv KariDE iiefn MBHL_ALCEU : 354- 358: shswy Kya-DE svglh MBHL_AZOCH : 59- 63: levil Kgr-DP rdawa MBHL_AZOCH : 384- 388: trtni Kel-DE ahkys MBHL_AZOVI : 59- 63: levil Kgr-DP rdawa MBHL_BRAJA : 60- 64: ievil Knr-DP rdawa MBHL_BRAJA : 353- 357: vhswy Kyp-DE tkglh MBHL_BRAJA : 477- 481: lvani Kag-DS stanv MBHL_BRAJA : 516- 520: lahwi Kik-DT kidny MBHL_ECOLI : 380- 384: npgdv Kgs-DT niqql MBHL_RHILV : 60- 64: ievil Knr-DP rdawa MBHL_RHILV : 353- 357: thswy Kyp-DE skglh MBHL_RHILV : 477- 481: liani Kag-DS ntafv MBHL_RHOCA : 60- 64: levil Kgr-DP rdawa MBHL_RHOCA : 478- 482: lvtni Kng-DS stanv MBHL_RHOGE : 10- 14: etqgf Kld-DS grriv MBHL_RHOGE : 60- 64: levil Kgr-DP rdawa MBHL_RHOGE : 262- 267: rlnfv KariDE miefn MBHL_WOLSU : 46- 50: letil Kgr-DP rdagf MBHL_WOLSU : 360- 364: tmvkt Kvi-DE kgkyt MBHM_ECOLI : 46- 50: meeiv Knr-DP rdawm PHNL_DESFR : 56- 60: leiil Kgr-DP rdaqh PHNL_DESFR : 443- 448: mekwi KemaDS gakdn PHNL_DESGI : 7- 12: emqgn KivvDP itrie PHNL_DESGI : 49- 53: lemil Kgr-DP rdaqh PHNL_DESVM : 66- 70: leiil Kgr-DP rdaqh PHNL_DESVM : 266- 271: lwket KafvDE vyipd PHSL_DESBA : 13- 18: adgkv KisiDP ltrve PHSL_DESBN : 13- 18: adgkk KisiDT r H 8: 9.9726 32( 18) K-x(0,2)-I-[DGV] Occurences: 32(18) FRHA_METTH : 44- 46: vrgle K--IV tgkap HOXH_ALCEU : 3- 7: sr KlvID pvtri HOXH_ALCEU : 259- 262: iiddd Kh-IV refdy HOXH_NOCOP : 3- 7: st KlvID pvtri MBHL_ALCEU : 261- 265: rlsfv KarID eiief MBHL_ALCEU : 562- 566: sprdy KgqIG afeas MBHL_AZOCH : 212- 215: aldvq Kd-IV eihti MBHL_AZOVI : 213- 216: aldlq Kd-IV kihti MBHL_BRAJA : 16- 19: ldnsg Kr-IV vdpvt MBHL_BRAJA : 213- 216: aldfq Ke-IV kihti MBHL_BRAJA : 521- 523: kikdt K--ID nyqcv MBHL_BRAJA : 541- 545: sprdp KgnIG afeas MBHL_ECOLI : 522- 524: airdg K--ID lyqcv MBHL_ECOLI : 542- 546: sprdp KgqIG ayeaa MBHL_RHILV : 16- 19: ldnsg Kr-IV vdpvt MBHL_RHILV : 213- 216: aldfq Ke-IV kihti MBHL_RHILV : 521- 523: rikdg K--ID nyqcv MBHL_RHOCA : 16- 19: ldnag Kr-IV vdpvt MBHL_RHOCA : 280- 283: ylpdl Ka-IG gfyke MBHL_RHOCA : 542- 546: sprds KgnIG afeas MBHL_RHOGE : 262- 266: rlnfv KarID emief MBHL_RHOGE : 563- 567: sprda KgqIG afeas MBHL_WOLSU : 2- 5: t Kr-IV vdpit MBHL_WOLSU : 360- 363: tmvkt Kv-ID ekgky MBHL_WOLSU : 461- 463: tytty K--ID knkey MBHM_ECOLI : 244- 248: rlmyi KsfID klsdf PHNL_DESFR : 487- 490: irikg Kk-ID nfqlv PHNL_DESFR : 488- 490: rikgk K--ID nfqlv PHNL_DESGI : 7- 9: emqgn K--IV vdpit PHNL_DESVM : 492- 494: riedg K--IG nfqlv PHSL_DESBA : 13- 17: adgkv KisID pltrv PHSL_DESBN : 13- 17: adgkk KisID tr I 9: 9.7489 35( 18) T-x(4,5)-G-x(3)-[AGILV] Occurences: 35(18) FRHA_METTH : 9- 18: ivisp Tsrqe-GhaeL vmevd FRHA_METTH : 315- 325: fderg TgklgvGaieG prgld HOXH_ALCEU : 10- 20: vidpv TrieghGkvvV hlddd HOXH_ALCEU : 379- 388: ppnaw Tgegv-GvveA prgtl HOXH_NOCOP : 10- 20: vidpv TrieghGkvtV hlddn MBHL_ALCEU : 47- 57: rnavs TgtmwrGlevI lkgrd MBHL_ALCEU : 284- 294: vlaig TlykqaGwlyG gglaa MBHL_ALCEU : 317- 326: aynks Tdqlp-GgaiL ngnwd MBHL_AZOCH : 47- 57: tnavs TgtmwrGlevI lkgrd MBHL_AZOCH : 541- 551: ttwng TprdhlGnigA yeaal MBHL_AZOVI : 47- 57: tnavs TgtmwrGlevI lkgrd MBHL_AZOVI : 542- 552: ttwng TprdhlGnigA yeaal MBHL_BRAJA : 48- 58: rnavs TgtmwrGievI lknrd MBHL_BRAJA : 71- 80: dawaf Teric-GvctG thalt MBHL_ECOLI : 11- 20: etqgy Tinna-GrrlV vdpit MBHL_ECOLI : 497- 507: patwp TecrgvGfteA prgal MBHL_RHILV : 10- 19: tpngf Tldns-GkriV vdpvt MBHL_RHILV : 48- 58: rnavs TgtmwrGievI lknrd MBHL_RHILV : 71- 80: dawaf Teric-GvctG thalt MBHL_RHOCA : 10- 19: tpngf Tldna-GkriV vdpvt MBHL_RHOCA : 48- 58: tnavs TgtmwrGlevI lkgrd MBHL_RHOCA : 71- 80: dawaf Teric-GvctG thalt MBHL_RHOGE : 48- 58: rnavs TgtmwrGlevI lkgrd MBHL_RHOGE : 285- 295: vlaig TiykqaGwlhG gglsa MBHL_RHOGE : 318- 327: aydha Thqlp-GgviL dgnwd MBHL_WOLSU : 34- 44: qdafs TatlwrGletI lkgrd MBHM_ECOLI : 466- 475: pnipa Tgefk-GvgfL eaprg PHNL_DESFR : 179- 189: qlgif TnayflGghkA yylpp PHNL_DESFR : 307- 317: ekhla TsqfpsGvitG rdlgk PHNL_DESGI : 170- 180: qlgif TnayflGghpA yvlpa PHNL_DESGI : 450- 460: dwqyp TesqgvGfvnA prgml PHNL_DESVM : 187- 197: qlgpf TnayflGghpA yyldp PHSL_DESBA : 5- 14: sqaa Tpaad-GkvkI sidpl PHSL_DESBA : 100- 110: tngri TrnlifGanyL qshil PHSL_DESBN : 5- 14: aqaa Tpaad-GkkkI sidtr J 10: 8.3401 49( 18) G-K Occurences: 49(18) FRHA_METTH : 48- 49: ekivt GK apeta FRHA_METTH : 316- 317: dergt GK lgvga FRHA_METTH : 339- 340: aqven GK iqfys HOXH_ALCEU : 16- 17: riegh GK vvvhl HOXH_ALCEU : 165- 166: ikavf GK kmhgi HOXH_NOCOP : 16- 17: riegh GK vtvhl MBHL_ALCEU : 224- 225: htifg GK nphpn MBHL_AZOCH : 223- 224: htifg GK nphpn MBHL_AZOCH : 525- 526: irlkd GK ienyq MBHL_AZOVI : 224- 225: htifg GK nphpn MBHL_AZOVI : 526- 527: irikd GK ienyq MBHL_BRAJA : 15- 16: nldns GK rivvd MBHL_BRAJA : 224- 225: htifg GK nphpn MBHL_BRAJA : 392- 393: qldeg GK yswik MBHL_ECOLI : 225- 226: havfg GK nphpn MBHL_ECOLI : 464- 465: aqwaa GK lqyff MBHL_ECOLI : 521- 522: aaird GK idlyq MBHL_RHILV : 15- 16: tldns GK rivvd MBHL_RHILV : 224- 225: htifg GK nphpn MBHL_RHILV : 296- 297: gggls GK nvlay MBHL_RHILV : 520- 521: irikd GK idnyq MBHL_RHOCA : 15- 16: tldna GK rivvd MBHL_RHOCA : 225- 226: htifg GK nphpn MBHL_RHOGE : 226- 227: haifg GK nphpn MBHL_RHOGE : 542- 543: irikd GK ienyq MBHL_WOLSU : 366- 367: videk GK ytwik MBHL_WOLSU : 378- 379: apryg GK plevg MBHM_ECOLI : 210- 211: vallg GK tphiq MBHM_ECOLI : 276- 277: ewltr GK gavny MBHM_ECOLI : 360- 361: gwsdd GK yswvk MBHM_ECOLI : 372- 373: sptfy GK tvevg MBHM_ECOLI : 451- 452: litni GK gdhtt PHNL_DESFR : 36- 37: veven GK vkdaw PHNL_DESFR : 223- 224: mailg GK nphtq PHNL_DESFR : 321- 322: tgrdl GK vdnvd PHNL_DESFR : 346- 347: apggd GK hpydc PHNL_DESFR : 377- 378: apryk GK amevg PHNL_DESFR : 408- 409: vdmvl GK lsvpa PHNL_DESFR : 486- 487: wirik GK kidnf PHNL_DESGI : 29- 30: veveg GK iknaw PHNL_DESGI : 274- 275: nwagi GK tsnfl PHNL_DESGI : 438- 439: anvka GK ddlyt PHNL_DESGI : 474- 475: ivqrg GK ienfq PHNL_DESVM : 46- 47: veven GK vknay PHNL_DESVM : 491- 492: iried GK ignfq PHSL_DESBA : 10- 11: tpaad GK vkisi PHSL_DESBA : 35- 36: vevkd GK vvdak PHSL_DESBA : 273- 274: gvyid GK deefd PHSL_DESBN : 10- 11: tpaad GK kkisi K 11: 7.8401 56( 18) T-x(0,1)-R Occurences: 56(18) FRHA_METTH : 9- 11: ivisp TsR qegha HOXH_ALCEU : 10- 11: vidpv T-R ieghg HOXH_ALCEU : 424- 426: qvmnr TvR svaed HOXH_NOCOP : 10- 11: vidpv T-R ieghg MBHL_ALCEU : 23- 24: vvdpv T-R ieghm MBHL_ALCEU : 382- 383: antkg T-R trieq MBHL_ALCEU : 384- 385: tkgtr T-R ieqid MBHL_AZOCH : 23- 24: vvdpv T-R ieghm MBHL_AZOCH : 80- 82: gvctg TtR wtsvr MBHL_AZOCH : 81- 82: vctgt T-R wtsvr MBHL_AZOCH : 166- 167: frhvq T-R lkkfv MBHL_AZOCH : 270- 271: earef T-R nvylp MBHL_AZOCH : 379- 380: pntkg T-R tnike MBHL_AZOCH : 541- 543: ttwng TpR dhlgn MBHL_AZOCH : 559- 560: aalln T-R merkd MBHL_AZOCH : 596- 597: dgqel T-R vkvr MBHL_AZOVI : 23- 24: vvdpv T-R ieghm MBHL_AZOVI : 167- 168: frdvq T-R lkkfv MBHL_AZOVI : 271- 272: earef T-R nvylp MBHL_AZOVI : 542- 544: ttwng TpR dhlgn MBHL_AZOVI : 560- 561: aalln T-R merpd MBHL_AZOVI : 597- 598: dgqel T-R vkvr MBHL_BRAJA : 24- 25: vvdpv T-R ieghm MBHL_BRAJA : 71- 73: dawaf TeR icgvc MBHL_BRAJA : 167- 168: fkdlq T-R lkkfv MBHL_ECOLI : 25- 26: vvdpi T-R ieghm MBHL_ECOLI : 265- 266: vqsii T-R tadfi MBHL_RHILV : 24- 25: vvdpv T-R ieghm MBHL_RHILV : 71- 73: dawaf TeR icgvc MBHL_RHILV : 167- 168: fkdiq T-R lkkfv MBHL_RHOCA : 24- 25: vvdpv T-R ieghm MBHL_RHOCA : 71- 73: dawaf TeR icgvc MBHL_RHOCA : 271- 272: rctef T-R nvylp MBHL_RHOCA : 382- 383: pnlkg T-R tnien MBHL_RHOCA : 420- 421: atssv T-R kghed MBHL_RHOGE : 24- 25: vvdpv T-R ieghm MBHL_RHOGE : 383- 384: artkg T-R taieh MBHL_WOLSU : 1- 3: TkR ivvdp MBHL_WOLSU : 10- 11: vvdpi T-R ieghl MBHL_WOLSU : 57- 59: dagff TqR icgvc MBHL_WOLSU : 176- 178: ywghk TyR fspeq MBHM_ECOLI : 11- 12: tidpv T-R ieghl MBHM_ECOLI : 274- 275: ypewl T-R gkgav PHNL_DESFR : 21- 22: vvdpi T-R ieghl PHNL_DESFR : 67- 69: daqhf TqR acgvc PHNL_DESFR : 149- 151: aasid TaR tgnse PHNL_DESFR : 316- 318: psgvi TgR dlgkv PHNL_DESGI : 14- 15: vvdpi T-R ieghl PHNL_DESGI : 60- 62: daqhf TqR acgvc PHNL_DESVM : 31- 32: vvdpv T-R ieghl PHNL_DESVM : 77- 79: daqhf TqR tcgvc PHNL_DESVM : 93- 94: halas T-R cvdna PHSL_DESBA : 20- 21: sidpl T-R veghl PHSL_DESBA : 100- 101: tngri T-R nlifg PHSL_DESBA : 145- 147: nadll TdR ikdga PHSL_DESBN : 18- 19: kisid T-R L 12: 7.8401 50( 18) I-x(3,4)-T Occurences: 50(18) FRHA_METTH : 4- 9: ser IvispT srqeg FRHA_METTH : 214- 219: lashq IygdrT kfdld HOXH_ALCEU : 6- 10: srklv Idpv-T riegh HOXH_ALCEU : 88- 93: glksg IhvtpT aekmr HOXH_NOCOP : 6- 10: stklv Idpv-T riegh MBHL_ALCEU : 73- 78: afver IcgvcT gchal MBHL_ALCEU : 107- 111: hlire Imak-T lqvhd MBHL_ALCEU : 497- 502: dlvan IragdT atanv MBHL_AZOCH : 73- 78: afver IcgvcT gttrw MBHL_AZOCH : 214- 219: dvqkd IveihT ifggk MBHL_AZOCH : 533- 537: enyqa Ivpt-T wngtp MBHL_AZOVI : 73- 78: afver IcgvcT gthal MBHL_AZOVI : 215- 220: dlqkd IvkihT ifggk MBHL_AZOVI : 534- 538: enyqa Ivpt-T wngtp MBHL_BRAJA : 74- 79: after IcgvcT gthal MBHL_BRAJA : 215- 220: dfqke IvkihT ifggk MBHL_BRAJA : 240- 245: gvpcp InvdgT gavga MBHL_BRAJA : 515- 520: alahw IkikdT kidny MBHL_ECOLI : 75- 80: afver IcgvcT gvhal MBHL_ECOLI : 109- 113: niirn Imla-T lwchd MBHL_ECOLI : 263- 267: nlvqs Iitr-T adfin MBHL_RHILV : 74- 79: after IcgvcT gthal MBHL_RHILV : 215- 220: dfqke IvkihT ifggk MBHL_RHILV : 240- 245: gvpcp InvdgT gavga MBHL_RHILV : 343- 348: adpeq IqefvT hswyk MBHL_RHOCA : 74- 79: after IcgvcT gthal MBHL_RHOCA : 263- 268: nlvss IidrcT eftrn MBHL_RHOCA : 264- 268: lvssi Idrc-T eftrn MBHL_RHOGE : 74- 79: afver IcgvcT gchal MBHL_RHOGE : 498- 503: elvan IragdT atanv MBHL_WOLSU : 60- 65: fftqr IcgvcT ysttk MBHL_WOLSU : 99- 104: msisl IlhdhT vhfyh MBHL_WOLSU : 285- 290: ysyqe IplnkT ewmys MBHL_WOLSU : 315- 320: inedl IteeaT hawyk MBHL_WOLSU : 400- 405: aknpr IekvaT qflkd MBHM_ECOLI : 7- 11: sqrit Idpv-T riegh MBHM_ECOLI : 60- 65: mivqr IcgvcT tthal MBHM_ECOLI : 95- 100: yirni IlaahT thdhi MBHM_ECOLI : 404- 409: neiva IyqklT gntle MBHM_ECOLI : 425- 429: stlgr Iigr-T vhcce PHNL_DESFR : 147- 152: klaas IdtarT gnsek PHNL_DESFR : 550- 554: cgvhv Iepe-T neilk PHNL_DESGI : 87- 92: cvgvk IpenaT lmrnl PHNL_DESGI : 415- 419: taarg Iqcl-T aaqev PHNL_DESVM : 104- 109: avgvh IpknaT yirnl PHNL_DESVM : 157- 162: kvass IsprkT taadl PHNL_DESVM : 554- 558: cgvhv Idgh-T nevhk PHSL_DESBA : 16- 20: kvkis Idpl-T rvegh PHSL_DESBA : 444- 448: ienyq Ivsa-T lwnan PHSL_DESBN : 14- 18: dgkkk Isid-T r M 13: 7.3401 103( 18) I-x(0,2)-D Occurences: 103(18) FRHA_METTH : 77- 78: asvea I--D dsldi FRHA_METTH : 77- 79: asvea Id-D sldie FRHA_METTH : 112- 115: ihhfl IapD fvpen FRHA_METTH : 192- 194: lmigl Ie-D kglpk FRHA_METTH : 214- 217: lashq IygD rtkfd FRHA_METTH : 296- 298: araie Il-D eldts FRHA_METTH : 397- 399: edrsv Ir-D emvrl HOXH_ALCEU : 6- 7: srklv I--D pvtri HOXH_ALCEU : 204- 205: svdqv I--D yaqdg HOXH_ALCEU : 254- 256: hgrlr Ii-D ddkhi HOXH_ALCEU : 254- 257: hgrlr IidD dkhiv HOXH_ALCEU : 255- 256: grlri I--D ddkhi HOXH_ALCEU : 255- 257: grlri Id-D dkhiv HOXH_ALCEU : 255- 258: grlri IddD khivr HOXH_ALCEU : 482- 483: aagrl I--D erar HOXH_NOCOP : 6- 7: stklv I--D pvtri MBHL_ALCEU : 17- 20: drgrr IvvD pvtri MBHL_ALCEU : 240- 243: gvpca InlD gigaa MBHL_ALCEU : 264- 265: fvkar I--D eiief MBHL_ALCEU : 389- 390: trieq I--D esaky MBHL_ALCEU : 538- 540: ghwir Ik-D grien MBHL_AZOCH : 17- 20: ksgrr IvvD pvtri MBHL_AZOCH : 239- 242: gvaca InlD dvgaa MBHL_AZOCH : 284- 287: lavag IykD wlygg MBHL_AZOVI : 17- 20: ksgrr IvvD pvtri MBHL_AZOVI : 240- 243: gvaca InlD dvgaa MBHL_AZOVI : 285- 288: lavag IykD wlygg MBHL_AZOVI : 387- 388: thiqe I--D eahky MBHL_AZOVI : 523- 525: ghwir Ik-D gkien MBHL_BRAJA : 18- 21: nsgkr IvvD pvtri MBHL_BRAJA : 240- 243: gvpcp InvD gtgav MBHL_BRAJA : 262- 264: nliss Ii-D rlief MBHL_BRAJA : 263- 264: lissi I--D rlief MBHL_BRAJA : 517- 519: ahwik Ik-D tkidn MBHL_BRAJA : 522- 523: ikdtk I--D nyqcv MBHL_ECOLI : 37- 39: rcevn In-D qnvit MBHL_ECOLI : 91- 93: asvya Ie-D aigik MBHL_ECOLI : 132- 133: agmdw I--D vldal MBHL_ECOLI : 241- 244: gmpca IniD esgav MBHL_ECOLI : 243- 244: pcain I--D esgav MBHL_ECOLI : 276- 278: innvm Ip-D alaig MBHL_ECOLI : 310- 313: gafpd IanD fgeks MBHL_ECOLI : 327- 330: pggav IngD fnnvl MBHL_ECOLI : 369- 371: hpfdg It-D pwynp MBHL_ECOLI : 518- 520: ghwaa Ir-D gkidl MBHL_ECOLI : 523- 524: irdgk I--D lyqcv MBHL_RHILV : 18- 21: nsgkr IvvD pvtri MBHL_RHILV : 98- 100: algit Ip-D nansi MBHL_RHILV : 151- 153: alaqs Is-D wplss MBHL_RHILV : 240- 243: gvpcp InvD gtgav MBHL_RHILV : 262- 264: nmvts Ii-D qlief MBHL_RHILV : 263- 264: mvtsi I--D qlief MBHL_RHILV : 517- 519: ahwir Ik-D gkidn MBHL_RHILV : 522- 523: ikdgk I--D nyqcv MBHL_RHOCA : 18- 21: nagkr IvvD pvtri MBHL_RHOCA : 98- 100: algit Ip-D nansi MBHL_RHOCA : 115- 117: qlnlq Ih-D hivhf MBHL_RHOCA : 241- 244: gvpcp InvD gvgav MBHL_RHOCA : 263- 265: nlvss Ii-D rctef MBHL_RHOCA : 264- 265: lvssi I--D rctef MBHL_RHOCA : 389- 390: tnien I--D egaky MBHL_RHOCA : 518- 520: ghwvk Ik-D grien MBHL_RHOGE : 18- 21: dsgrr IvvD pvtri MBHL_RHOGE : 242- 245: gvpca InlD gngaa MBHL_RHOGE : 265- 266: fvkar I--D emief MBHL_RHOGE : 326- 328: lpggv Il-D gnwde MBHL_RHOGE : 337- 338: deiha I--D prdpe MBHL_RHOGE : 390- 391: taieh I--D esaky MBHL_RHOGE : 539- 541: ghwir Ik-D gkien MBHL_WOLSU : 4- 7: tkr IvvD pitri MBHL_WOLSU : 28- 30: dennv Iq-D afsta MBHL_WOLSU : 99- 102: msisl IlhD htvhf MBHL_WOLSU : 298- 301: mystg IvmD gditk MBHL_WOLSU : 310- 313: tkvhe IneD litee MBHL_WOLSU : 362- 363: vktkv I--D ekgky MBHL_WOLSU : 462- 463: yttyk I--D knkey MBHM_ECOLI : 5- 8: msqr ItiD pvtri MBHM_ECOLI : 7- 8: sqrit I--D pvtri MBHM_ECOLI : 19- 20: eghlr I--D ceien MBHM_ECOLI : 82- 83: esaln I--D vpvna MBHM_ECOLI : 155- 157: kvqnk Ik-D lvasg MBHM_ECOLI : 227- 230: gvanp InlD glgvl MBHM_ECOLI : 247- 248: yiksf I--D klsdf MBHM_ECOLI : 488- 490: shwmv Ik-D giisn PHNL_DESFR : 15- 18: tftgp IvvD pitri PHNL_DESFR : 147- 148: klaas I--D tartg PHNL_DESFR : 266- 268: vnecy Ip-D llava PHNL_DESFR : 331- 334: vdlga IyeD vkysw PHNL_DESFR : 489- 490: ikgkk I--D nfqlv PHNL_DESFR : 523- 525: ligtp Ia-D pkrpv PHNL_DESGI : 8- 11: mqgnk IvvD pitri PHNL_DESGI : 257- 259: ieqvy It-D llava PHNL_DESGI : 510- 512: ligtp Ia-D pkrpv PHNL_DESGI : 537- 538: cgvhv I--D pesnq PHNL_DESVM : 25- 28: sysgp IvvD pvtri PHNL_DESVM : 274- 276: vdevy Ip-D llvva PHNL_DESVM : 488- 490: shwir Ie-D gkign PHNL_DESVM : 554- 555: cgvhv I--D ghtne PHSL_DESBA : 14- 17: dgkvk IsiD pltrv PHSL_DESBA : 16- 17: kvkis I--D pltrv PHSL_DESBA : 148- 150: lltdr Ik-D gakad PHSL_DESBA : 271- 272: kpgvy I--D gkdee PHSL_DESBA : 411- 413: yvkse Ip-D aaegt PHSL_DESBA : 434- 436: lhylk Ik-D kkien PHSL_DESBA : 512- 513: ehvvn I--D PHSL_DESBN : 14- 17: dgkkk IsiD tr PHSL_DESBN : 16- 17: kkkis I--D tr N 14: 7.3401 72( 18) I-x(1,3)-T Occurences: 72(18) FRHA_METTH : 6- 9: seriv Isp-T srqeg FRHA_METTH : 27- 29: vddeg Iv--T kgryf FRHA_METTH : 45- 47: rglek Iv--T gkape FRHA_METTH : 67- 70: cgvcp Iph-T lasve FRHA_METTH : 354- 356: pttwn Ip--T mgpat HOXH_ALCEU : 6- 10: srklv IdpvT riegh HOXH_ALCEU : 88- 91: glksg Ihv-T ptaek HOXH_NOCOP : 6- 10: stklv IdpvT riegh MBHL_ALCEU : 107- 111: hlire ImakT lqvhd MBHL_ALCEU : 218- 220: kewvk Ih--T ifggk MBHL_ALCEU : 282- 284: pdvla Ig--T lykqa MBHL_ALCEU : 469- 472: llpst Igr-T laral MBHL_ALCEU : 586- 589: eqpve Ilr-T lhsfd MBHL_AZOCH : 40- 42: vdann Ii--T navst MBHL_AZOCH : 217- 219: kdive Ih--T ifggk MBHL_AZOCH : 533- 536: enyqa Ivp-T twngt MBHL_AZOCH : 533- 537: enyqa IvptT wngtp MBHL_AZOCH : 570- 573: depve Ilr-T lhsfd MBHL_AZOVI : 218- 220: kdivk Ih--T ifggk MBHL_AZOVI : 534- 537: enyqa Ivp-T twngt MBHL_AZOVI : 534- 538: enyqa IvptT wngtp MBHL_AZOVI : 571- 574: depve Ilr-T lhsfd MBHL_BRAJA : 3- 5: mg Iq--T pngfn MBHL_BRAJA : 218- 220: keivk Ih--T ifggk MBHL_BRAJA : 517- 520: ahwik Ikd-T kidny MBHL_BRAJA : 565- 568: eqple Ilr-T ihsfd MBHL_ECOLI : 109- 113: niirn ImlaT lwchd MBHL_ECOLI : 263- 265: nlvqs Ii--T rtadf MBHL_ECOLI : 263- 267: nlvqs IitrT adfin MBHL_ECOLI : 264- 267: lvqsi Itr-T adfin MBHL_ECOLI : 292- 294: kpwse Ig--T glsdk MBHL_ECOLI : 445- 448: lplsg Iqs-T lgril MBHL_ECOLI : 566- 569: eqple Ilr-T lhsfd MBHL_RHILV : 3- 5: mt Iq--T pngft MBHL_RHILV : 165- 167: gyfkd Iq--T rlkkf MBHL_RHILV : 218- 220: keivk Ih--T ifggk MBHL_RHILV : 565- 568: tqple Ilr-T ihsfd MBHL_RHOCA : 41- 43: vndqg Ii--T navst MBHL_RHOCA : 264- 268: lvssi IdrcT eftrn MBHL_RHOCA : 566- 569: eepve Ilr-T lhsfd MBHL_RHOGE : 4- 6: mga Ie--T qgfkl MBHL_RHOGE : 283- 285: pdvla Ig--T iykqa MBHL_RHOGE : 470- 473: llptt Igr-T larcl MBHL_RHOGE : 587- 590: eqpve Ilr-T lhsfd MBHL_WOLSU : 141- 143: yspnp Ia--T gadel MBHM_ECOLI : 7- 11: sqrit IdpvT riegh MBHM_ECOLI : 425- 429: stlgr IigrT vhcce MBHM_ECOLI : 426- 429: tlgri Igr-T vhcce MBHM_ECOLI : 463- 466: fvkpn Ipa-T gefkg PHNL_DESFR : 147- 149: klaas Id--T artgn PHNL_DESFR : 177- 179: sgqlg If--T nayfl PHNL_DESFR : 199- 201: pevnl Ia--T ahyle PHNL_DESFR : 282- 285: kdwgg Igg-T snyla PHNL_DESFR : 429- 431: taarg Ie--T aivca PHNL_DESFR : 519- 521: veeal Ig--T piadp PHNL_DESFR : 532- 535: krpve Ilr-T vhafd PHNL_DESFR : 550- 554: cgvhv IepeT neilk PHNL_DESGI : 168- 170: sgqlg If--T nayfl PHNL_DESGI : 190- 192: aevdl Ia--T ahyle PHNL_DESGI : 273- 276: knwag Igk-T snflt PHNL_DESGI : 415- 419: taarg IqclT aaqev PHNL_DESGI : 506- 508: veqal Ig--T piadp PHNL_DESGI : 519- 522: krpve Ilr-T vhsyd PHNL_DESVM : 13- 16: napgg Ipv-T pkssy PHNL_DESVM : 207- 209: petnl Ia--T ahyle PHNL_DESVM : 432- 434: taarg Ie--T aviae PHNL_DESVM : 523- 525: veasl Ig--T pvada PHNL_DESVM : 536- 539: krpve Ilr-T vhsfd PHNL_DESVM : 554- 558: cgvhv IdghT nevhk PHSL_DESBA : 16- 20: kvkis IdplT rvegh PHSL_DESBA : 200- 202: ggate Ip--T adkva PHSL_DESBA : 228- 230: eylpl Iy--T lgsvy PHSL_DESBA : 444- 448: ienyq IvsaT lwnan PHSL_DESBN : 14- 18: dgkkk IsidT r PHSL_DESBN : 16- 18: kkkis Id--T r O 15: 7.3401 85( 18) S-x(0,2)-T Occurences: 85(18) FRHA_METTH : 7- 9: erivi Sp-T srqeg FRHA_METTH : 35- 37: kgryf Si-T pvrgl FRHA_METTH : 246- 247: akrac S--T iplyd FRHA_METTH : 381- 384: ydpcl ScaT hvmvv HOXH_ALCEU : 109- 111: aqmlq Sh-T tayfy HOXH_ALCEU : 109- 112: aqmlq ShtT ayfyl HOXH_ALCEU : 312- 315: mnvtk SlpT plaqe HOXH_ALCEU : 459- 462: ydpcl ScaT halgq HOXH_NOCOP : 1- 2: S--T klvid MBHL_ALCEU : 46- 47: irnav S--T gtmwr MBHL_ALCEU : 46- 49: irnav StgT mwrgl MBHL_ALCEU : 316- 317: vaynk S--T dqlpg MBHL_ALCEU : 467- 468: kqllp S--T igrtl MBHL_ALCEU : 600- 601: pclac S--T hvmsa MBHL_AZOCH : 46- 47: itnav S--T gtmwr MBHL_AZOCH : 46- 49: itnav StgT mwrgl MBHL_AZOCH : 174- 177: kkfve SgaT acspn MBHL_AZOCH : 251- 252: aaggr S--T ctsln MBHL_AZOCH : 251- 254: aaggr StcT slnfv MBHL_AZOCH : 301- 304: ghnll SygT ftkvp MBHL_AZOCH : 438- 439: aafnq S--T glnla MBHL_AZOCH : 451- 452: sssal S--T lgrts MBHL_AZOCH : 584- 585: pclac S--T hvmsp MBHL_AZOVI : 46- 47: itnav S--T gtmwr MBHL_AZOVI : 46- 49: itnav StgT mwrgl MBHL_AZOVI : 302- 305: ahnll SygT ftkvp MBHL_AZOVI : 380- 382: pntkg Sr-T hiqei MBHL_AZOVI : 439- 440: aafnq S--T glnlg MBHL_AZOVI : 452- 453: kqflp S--T lgrtl MBHL_AZOVI : 498- 499: ekwdp S--T wpkea MBHL_AZOVI : 585- 586: pclac S--T hvmsp MBHL_BRAJA : 47- 48: irnav S--T gtmwr MBHL_BRAJA : 47- 50: irnav StgT mwrgi MBHL_BRAJA : 145- 146: dprat S--T laqsi MBHL_BRAJA : 446- 447: tsalf S--T lgrta MBHL_BRAJA : 481- 483: ikagd Ss-T anvdk MBHL_BRAJA : 482- 483: kagds S--T anvdk MBHL_BRAJA : 579- 580: pclac S--T hvmsp MBHL_ECOLI : 2- 3: m S--T qyetq MBHL_ECOLI : 48- 51: itnav ScgT ifrgl MBHL_ECOLI : 262- 265: lnlvq SiiT rtadf MBHL_ECOLI : 382- 384: gdvkg Sd-T niqql MBHL_ECOLI : 447- 448: lsgiq S--T lgril MBHL_ECOLI : 486- 487: nlata S--T ekwep MBHL_ECOLI : 580- 581: pclac S--T hvlgd MBHL_RHILV : 47- 48: irnav S--T gtmwr MBHL_RHILV : 47- 50: irnav StgT mwrgi MBHL_RHILV : 446- 447: vtalf S--T lgrta MBHL_RHILV : 481- 483: ikagd Sn-T afvdk MBHL_RHILV : 557- 560: mdtpm SnpT qplei MBHL_RHILV : 579- 580: pclac S--T hvmsp MBHL_RHOCA : 47- 48: itnav S--T gtmwr MBHL_RHOCA : 47- 50: itnav StgT mwrgl MBHL_RHOCA : 417- 420: plaat SsvT rkghe MBHL_RHOCA : 418- 420: laats Sv-T rkghe MBHL_RHOCA : 447- 448: vsalf S--T lgrta MBHL_RHOCA : 482- 484: ikngd Ss-T anvek MBHL_RHOCA : 483- 484: kngds S--T anvek MBHL_RHOCA : 493- 494: ekwdp S--T wpkea MBHL_RHOCA : 580- 581: pclac S--T hvmsa MBHL_RHOGE : 47- 48: irnav S--T gtmwr MBHL_RHOGE : 47- 50: irnav StgT mwrgl MBHL_RHOGE : 601- 602: pclac S--T hvmse MBHL_WOLSU : 33- 34: iqdaf S--T atlwr MBHL_WOLSU : 33- 36: iqdaf StaT lwrgl MBHL_WOLSU : 67- 68: gvcty S--T tkqes MBHL_WOLSU : 67- 69: gvcty St-T kqesv MBHL_WOLSU : 217- 219: qphpq Sl-T vggvt MBHL_WOLSU : 295- 296: tewmy S--T givmd MBHL_WOLSU : 455- 456: lkvdq S--T yttyk MBHL_WOLSU : 455- 458: lkvdq StyT tykid MBHL_WOLSU : 501- 502: qavvp S--T wnagp MBHM_ECOLI : 34- 36: skawa Sg-T mwrgm MBHM_ECOLI : 138- 139: mlkgv S--T whlns MBHM_ECOLI : 367- 369: yswvk Sp-T fygkt MBHM_ECOLI : 393- 394: aagre S--T qnkln MBHM_ECOLI : 420- 421: vaqlh S--T lgrii MBHM_ECOLI : 502- 503: qavvp S--T wnsgp PHNL_DESFR : 3- 6: ae SkpT pqstf PHNL_DESFR : 9- 10: kptpq S--T ftgpi PHNL_DESFR : 9- 12: kptpq StfT gpivv PHNL_DESFR : 146- 149: aklaa SidT artgn PHNL_DESFR : 419- 420: atalh S--T lgrta PHNL_DESFR : 498- 499: qlvvp S--T wnlgp PHNL_DESGI : 36- 39: iknaw SmsT lfrgl PHNL_DESGI : 38- 39: nawsm S--T lfrgl PHNL_DESGI : 294- 297: eydln SryT pqgvi PHNL_DESGI : 405- 406: pealf S--T lgrta PHNL_DESGI : 485- 486: qhvvp S--T wnlgp PHNL_DESVM : 53- 56: vknay SssT lfrgl PHNL_DESVM : 54- 56: knays Ss-T lfrgl PHNL_DESVM : 55- 56: nayss S--T lfrgl PHNL_DESVM : 92- 93: thala S--T rcvdn PHNL_DESVM : 422- 423: pealf S--T lgrta PHNL_DESVM : 502- 503: qlvvp S--T wtlgp PHNL_DESVM : 502- 505: qlvvp StwT lgprc PHSL_DESBA : 233- 236: iytlg SvyT dlfet PHSL_DESBA : 446- 448: nyqiv Sa-T lwnan PHSL_DESBN : 15- 18: gkkki SidT r Number of patterns evaluated by Pratt:38 Total running time: 1 seconds