------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 30 sequences from file NATRIURETIC_PEPTIDE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 30 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename NATRIURETIC_PEPTIDE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: ANFB_BOVIN 103 ANFB_CANFA 140 ANFB_HUMAN 134 ANFB_MOUSE 121 ANFB_PIG 131 ANFB_RAT 121 ANFC_ANGJA 22 ANFC_BOVIN 52 ANFC_CHICK 22 ANFC_HUMAN 126 ANFC_PIG 126 ANFC_RANCA 129 ANFC_SCYCA 115 ANFC_SQUAC 135 ANFD_RANCA 118 ANFV_ANGJA 36 ANF_ANGJA 27 ANF_BOVIN 152 ANF_CANFA 149 ANF_CAVPO 128 ANF_CHICK 140 ANF_HORSE 153 ANF_HUMAN 153 ANF_MOUSE 152 ANF_PIG 150 ANF_RABIT 153 ANF_RANCA 145 ANF_RANRI 30 ANF_RAT 152 DNP_DENAN 38 Pratt run started at Thu Feb 6 20:21:53 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.0102 37( 30) G-x(3,4)-D-x(3,5)-S 2: 11.0102 31( 30) F-x(3,4)-D-x(3,5)-S 3: 7.8401 74( 30) S-x(1,2)-G 4: 7.8401 72( 30) R-x(3,4)-S 5: 7.3401 83( 30) S-x(0,2)-G 6: 7.3401 90( 30) R-x(2,4)-S 7: 7.3401 54( 30) D-x(3,5)-S Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 17.7775 30( 30) F-x(3,4)-D-x(3,5)-S-x-[LM]-[GT] B 2: 14.5771 36( 30) G-x(3,4)-D-x(3,5)-S-x-[LM] C 3: 10.9070 41( 30) D-x(3,5)-S-x-[LM] D 4: 9.7563 52( 30) S-x(1,2)-G-[ACGSV] E 5: 9.2563 57( 30) S-x(0,2)-G-[ACGSV] F 6: 7.8401 72( 30) R-x(3,4)-S G 7: 7.3401 90( 30) R-x(2,4)-S Best patterns with alignements: fitness hits(seqs) Pattern A 1: 17.7775 30( 30) F-x(3,4)-D-x(3,5)-S-x-[LM]-[GT] Occurences: 30(30) ANFB_BOVIN : 82- 96: rdsgc FgrrlDrigslSgLG cnvlr ANFB_CANFA : 119- 133: hksgc FgrrlDrigslSgLG cnvlr ANFB_HUMAN : 113- 127: qgsgc FgrkmDrisssSgLG ckvlr ANFB_MOUSE : 100- 114: hissc FghkiDrigsvSrLG cnalk ANFB_PIG : 110- 124: rdsgc FgrrlDrigslSgLG cnvlr ANFB_RAT : 100- 114: hsssc FgqkiDrigavSrLG cdglr ANFC_ANGJA : 7- 21: wnrgc FglklDrigslSgLG c ANFC_BOVIN : 10- 21: alaag Fqhk-Dtey--ShLT rvaps ANFC_CHICK : 7- 21: lsrsc FgvklDrigsmSgLG c ANFC_HUMAN : 111- 125: lskgc FglklDrigsmSgLG c ANFC_PIG : 111- 125: lskgc FglklDrigsmSgLG c ANFC_RANCA : 114- 128: ysrgc FgvklDrigafSgLG c ANFC_SCYCA : 100- 114: psrgc FgvklDrigamSgLG c ANFC_SQUAC : 120- 134: psrsc FglklDrigamSgLG c ANFD_RANCA : 103- 117: tskgc FglklDrigamSgLG c ANFV_ANGJA : 7- 21: sfnsc FgtrmDrigswSgLG cnslk ANF_ANGJA : 8- 22: ssspc FggklDrigsySgLG cnsrk ANF_BOVIN : 130- 144: rrssc FggrmDrigaqSgLG cnsfr ANF_CANFA : 129- 143: rrssc FggrmDrigaqSgLG cnsfr ANF_CAVPO : 106- 120: rrssc FggrmDrigaqSsLG cnsfr ANF_CHICK : 119- 133: rdsgc FgrriDrigslSgMG cngsr ANF_HORSE : 131- 145: rrssc FggrmDrigaqSgLG cnsfr ANF_HUMAN : 131- 145: rrssc FggrmDrigaqSgLG cnsfr ANF_MOUSE : 130- 144: rrssc FggriDrigaqSgLG cnsfr ANF_PIG : 130- 144: rrssc FggrmDrigaqSgLG cnsfr ANF_RABIT : 131- 145: rrssc FggriDrigaqSgLG cnsfr ANF_RANCA : 126- 140: rssdc FgsriDrigaqSgMG cgrrf ANF_RANRI : 12- 26: rssdc FgsriDrigaqSgMG cgrf ANF_RAT : 130- 144: rrssc FggriDrigaqSgLG cnsfr DNP_DENAN : 8- 22: kydpc FghkiDrinhvSnLG cpslr B 2: 14.5771 36( 30) G-x(3,4)-D-x(3,5)-S-x-[LM] Occurences: 36(30) ANFB_BOVIN : 83- 95: dsgcf Grrl-DrigslSgL gcnvl ANFB_CANFA : 120- 132: ksgcf Grrl-DrigslSgL gcnvl ANFB_HUMAN : 33- 43: plgsp Gsas-Dlet--SgL qeqrn ANFB_HUMAN : 114- 126: gsgcf Grkm-DrisssSgL gckvl ANFB_MOUSE : 101- 113: isscf Ghki-DrigsvSrL gcnal ANFB_PIG : 111- 123: dsgcf Grrl-DrigslSgL gcnvl ANFB_RAT : 101- 113: ssscf Gqki-DrigavSrL gcdgl ANFC_ANGJA : 8- 20: nrgcf Glkl-DrigslSgL gc ANFC_BOVIN : 9- 20: galaa GfqhkDtey--ShL trvap ANFC_CHICK : 8- 20: srscf Gvkl-DrigsmSgL gc ANFC_HUMAN : 112- 124: skgcf Glkl-DrigsmSgL gc ANFC_PIG : 112- 124: skgcf Glkl-DrigsmSgL gc ANFC_RANCA : 115- 127: srgcf Gvkl-DrigafSgL gc ANFC_SCYCA : 101- 113: srgcf Gvkl-DrigamSgL gc ANFC_SQUAC : 121- 133: srscf Glkl-DrigamSgL gc ANFD_RANCA : 104- 116: skgcf Glkl-DrigamSgL gc ANFV_ANGJA : 8- 20: fnscf Gtrm-DrigswSgL gcnsl ANF_ANGJA : 9- 21: sspcf Ggkl-DrigsySgL gcnsr ANF_BOVIN : 131- 143: rsscf Ggrm-DrigaqSgL gcnsf ANF_CANFA : 96- 108: dggal GrspwDssdr-SaL lkskl ANF_CANFA : 130- 142: rsscf Ggrm-DrigaqSgL gcnsf ANF_CAVPO : 107- 119: rsscf Ggrm-DrigaqSsL gcnsf ANF_CHICK : 120- 132: dsgcf Grri-DrigslSgM gcngs ANF_HORSE : 98- 110: dggal GrgswDssdr-SaL lkskl ANF_HORSE : 132- 144: rsscf Ggrm-DrigaqSgL gcnsf ANF_HUMAN : 98- 110: dggal GrgpwDssdr-SaL lkskl ANF_HUMAN : 132- 144: rsscf Ggrm-DrigaqSgL gcnsf ANF_MOUSE : 131- 143: rsscf Ggri-DrigaqSgL gcnsf ANF_PIG : 97- 109: dggal GrgpwDasdr-SaL lkskl ANF_PIG : 131- 143: rsscf Ggrm-DrigaqSgL gcnsf ANF_RABIT : 132- 144: rsscf Ggri-DrigaqSgL gcnsf ANF_RANCA : 127- 139: ssdcf Gsri-DrigaqSgM gcgrr ANF_RANRI : 13- 25: ssdcf Gsri-DrigaqSgM gcgrf ANF_RAT : 97- 109: dggal GrgpwDpsdr-SaL lkskl ANF_RAT : 131- 143: rsscf Ggri-DrigaqSgL gcnsf DNP_DENAN : 9- 21: ydpcf Ghki-DrinhvSnL gcpsl C 3: 10.9070 41( 30) D-x(3,5)-S-x-[LM] Occurences: 41(30) ANFB_BOVIN : 87- 95: fgrrl DrigslSgL gcnvl ANFB_CANFA : 124- 132: fgrrl DrigslSgL gcnvl ANFB_HUMAN : 37- 43: pgsas Dlet--SgL qeqrn ANFB_HUMAN : 118- 126: fgrkm DrisssSgL gckvl ANFB_MOUSE : 2- 10: m DllkvlSqM ilfll ANFB_MOUSE : 105- 113: fghki DrigsvSrL gcnal ANFB_PIG : 115- 123: fgrrl DrigslSgL gcnvl ANFB_RAT : 105- 113: fgqki DrigavSrL gcdgl ANFC_ANGJA : 12- 20: fglkl DrigslSgL gc ANFC_BOVIN : 14- 20: gfqhk Dtey--ShL trvap ANFC_CHICK : 12- 20: fgvkl DrigsmSgL gc ANFC_HUMAN : 116- 124: fglkl DrigsmSgL gc ANFC_PIG : 116- 124: fglkl DrigsmSgL gc ANFC_RANCA : 119- 127: fgvkl DrigafSgL gc ANFC_SCYCA : 6- 14: rprsd DslqtlSrL ledey ANFC_SCYCA : 105- 113: fgvkl DrigamSgL gc ANFC_SQUAC : 27- 35: rprad DslqvlSrL ledey ANFC_SQUAC : 63- 71: aaslp DlntdqSdL elpwd ANFC_SQUAC : 125- 133: fglkl DrigamSgL gc ANFD_RANCA : 108- 116: fglkl DrigamSgL gc ANFV_ANGJA : 12- 20: fgtrm DrigswSgL gcnsl ANF_ANGJA : 13- 21: fggkl DrigsySgL gcnsr ANF_BOVIN : 135- 143: fggrm DrigaqSgL gcnsf ANF_CANFA : 101- 108: grspw Dssdr-SaL lkskl ANF_CANFA : 134- 142: fggrm DrigaqSgL gcnsf ANF_CAVPO : 111- 119: fggrm DrigaqSsL gcnsf ANF_CHICK : 124- 132: fgrri DrigslSgM gcngs ANF_HORSE : 103- 110: grgsw Dssdr-SaL lkskl ANF_HORSE : 136- 144: fggrm DrigaqSgL gcnsf ANF_HUMAN : 103- 110: grgpw Dssdr-SaL lkskl ANF_HUMAN : 136- 144: fggrm DrigaqSgL gcnsf ANF_MOUSE : 102- 109: rrspw Dpsdr-SaL lkskl ANF_MOUSE : 135- 143: fggri DrigaqSgL gcnsf ANF_PIG : 102- 109: grgpw Dasdr-SaL lkskl ANF_PIG : 135- 143: fggrm DrigaqSgL gcnsf ANF_RABIT : 136- 144: fggri DrigaqSgL gcnsf ANF_RANCA : 131- 139: fgsri DrigaqSgM gcgrr ANF_RANRI : 17- 25: fgsri DrigaqSgM gcgrf ANF_RAT : 102- 109: grgpw Dpsdr-SaL lkskl ANF_RAT : 135- 143: fggri DrigaqSgL gcnsf DNP_DENAN : 13- 21: fghki DrinhvSnL gcpsl D 4: 9.7563 52( 30) S-x(1,2)-G-[ACGSV] Occurences: 52(30) ANFB_BOVIN : 93- 97: rigsl SglGC nvlrr ANFB_CANFA : 20- 24: lflhl SplGG rphpl ANFB_CANFA : 130- 134: rigsl SglGC nvlrk ANFB_HUMAN : 31- 34: shplg Sp-GS asdle ANFB_HUMAN : 124- 128: risss SglGC kvlrr ANFB_MOUSE : 20- 24: lflyl SplGG hsypl ANFB_MOUSE : 77- 80: krvlr Sq-GS tlrvq ANFB_MOUSE : 111- 115: rigsv SrlGC nalkl ANFB_PIG : 121- 125: rigsl SglGC nvlrr ANFB_RAT : 20- 24: lflnl SplGG hshpl ANFB_RAT : 111- 115: rigav SrlGC dglrl ANFC_ANGJA : 18- 22: rigsl SglGC ANFC_BOVIN : 2- 5: l Sa-GA laagf ANFC_CHICK : 5- 9: glsr ScfGV kldri ANFC_CHICK : 18- 22: rigsm SglGC ANFC_HUMAN : 107- 110: nkkgl Sk-GC fglkl ANFC_HUMAN : 122- 126: rigsm SglGC ANFC_PIG : 107- 110: nkkgl Sk-GC fglkl ANFC_PIG : 122- 126: rigsm SglGC ANFC_RANCA : 44- 47: dnfer Sf-GS deadq ANFC_RANCA : 110- 113: nkkgy Sr-GC fgvkl ANFC_RANCA : 125- 129: rigaf SglGC ANFC_SCYCA : 96- 99: skkgp Sr-GC fgvkl ANFC_SCYCA : 111- 115: rigam SglGC ANFC_SQUAC : 131- 135: rigam SglGC ANFD_RANCA : 99- 102: nkkgt Sk-GC fglkl ANFD_RANCA : 114- 118: rigam SglGC ANFV_ANGJA : 18- 22: rigsw SglGC nslkn ANF_ANGJA : 19- 23: rigsy SglGC nsrk ANF_BOVIN : 128- 132: slrrs ScfGG rmdri ANF_BOVIN : 141- 145: rigaq SglGC nsfry ANF_CANFA : 127- 131: slrrs ScfGG rmdri ANF_CANFA : 140- 144: rigaq SglGC nsfry ANF_CAVPO : 104- 108: slrrs ScfGG rmdri ANF_CAVPO : 117- 121: rigaq SslGC nsfry ANF_CAVPO : 118- 121: igaqs Sl-GC nsfry ANF_CHICK : 130- 134: rigsl SgmGC ngsrk ANF_HORSE : 129- 133: slrrs ScfGG rmdri ANF_HORSE : 142- 146: rigaq SglGC nsfry ANF_HUMAN : 129- 133: slrrs ScfGG rmdri ANF_HUMAN : 142- 146: rigaq SglGC nsfry ANF_MOUSE : 128- 132: slrrs ScfGG ridri ANF_MOUSE : 141- 145: rigaq SglGC nsfry ANF_PIG : 128- 132: slrrs ScfGG rmdri ANF_PIG : 141- 145: rigaq SglGC nsfry ANF_RABIT : 129- 133: slrrs ScfGG ridri ANF_RABIT : 142- 146: rigaq SglGC nsfry ANF_RANCA : 137- 141: rigaq SgmGC grrf ANF_RANRI : 23- 27: rigaq SgmGC grf ANF_RAT : 128- 132: slrrs ScfGG ridri ANF_RAT : 141- 145: rigaq SglGC nsfry DNP_DENAN : 19- 23: rinhv SnlGC pslrd E 5: 9.2563 57( 30) S-x(0,2)-G-[ACGSV] Occurences: 57(30) ANFB_BOVIN : 79- 81: kmmrd S--GC fgrrl ANFB_BOVIN : 93- 97: rigsl SglGC nvlrr ANFB_CANFA : 20- 24: lflhl SplGG rphpl ANFB_CANFA : 116- 118: kmmhk S--GC fgrrl ANFB_CANFA : 130- 134: rigsl SglGC nvlrk ANFB_HUMAN : 31- 34: shplg Sp-GS asdle ANFB_HUMAN : 110- 112: kmvqg S--GC fgrkm ANFB_HUMAN : 124- 128: risss SglGC kvlrr ANFB_MOUSE : 20- 24: lflyl SplGG hsypl ANFB_MOUSE : 77- 80: krvlr Sq-GS tlrvq ANFB_MOUSE : 111- 115: rigsv SrlGC nalkl ANFB_PIG : 107- 109: ktmrd S--GC fgrrl ANFB_PIG : 121- 125: rigsl SglGC nvlrr ANFB_RAT : 20- 24: lflnl SplGG hshpl ANFB_RAT : 111- 115: rigav SrlGC dglrl ANFC_ANGJA : 18- 22: rigsl SglGC ANFC_BOVIN : 2- 5: l Sa-GA laagf ANFC_CHICK : 5- 9: glsr ScfGV kldri ANFC_CHICK : 18- 22: rigsm SglGC ANFC_HUMAN : 107- 110: nkkgl Sk-GC fglkl ANFC_HUMAN : 122- 126: rigsm SglGC ANFC_PIG : 107- 110: nkkgl Sk-GC fglkl ANFC_PIG : 122- 126: rigsm SglGC ANFC_RANCA : 44- 47: dnfer Sf-GS deadq ANFC_RANCA : 110- 113: nkkgy Sr-GC fgvkl ANFC_RANCA : 125- 129: rigaf SglGC ANFC_SCYCA : 96- 99: skkgp Sr-GC fgvkl ANFC_SCYCA : 111- 115: rigam SglGC ANFC_SQUAC : 131- 135: rigam SglGC ANFD_RANCA : 99- 102: nkkgt Sk-GC fglkl ANFD_RANCA : 114- 118: rigam SglGC ANFV_ANGJA : 18- 22: rigsw SglGC nslkn ANF_ANGJA : 19- 23: rigsy SglGC nsrk ANF_BOVIN : 128- 132: slrrs ScfGG rmdri ANF_BOVIN : 141- 145: rigaq SglGC nsfry ANF_CANFA : 127- 131: slrrs ScfGG rmdri ANF_CANFA : 140- 144: rigaq SglGC nsfry ANF_CAVPO : 104- 108: slrrs ScfGG rmdri ANF_CAVPO : 117- 121: rigaq SslGC nsfry ANF_CAVPO : 118- 121: igaqs Sl-GC nsfry ANF_CHICK : 116- 118: rmmrd S--GC fgrri ANF_CHICK : 130- 134: rigsl SgmGC ngsrk ANF_HORSE : 129- 133: slrrs ScfGG rmdri ANF_HORSE : 142- 146: rigaq SglGC nsfry ANF_HUMAN : 129- 133: slrrs ScfGG rmdri ANF_HUMAN : 142- 146: rigaq SglGC nsfry ANF_MOUSE : 128- 132: slrrs ScfGG ridri ANF_MOUSE : 141- 145: rigaq SglGC nsfry ANF_PIG : 128- 132: slrrs ScfGG rmdri ANF_PIG : 141- 145: rigaq SglGC nsfry ANF_RABIT : 129- 133: slrrs ScfGG ridri ANF_RABIT : 142- 146: rigaq SglGC nsfry ANF_RANCA : 137- 141: rigaq SgmGC grrf ANF_RANRI : 23- 27: rigaq SgmGC grf ANF_RAT : 128- 132: slrrs ScfGG ridri ANF_RAT : 141- 145: rigaq SglGC nsfry DNP_DENAN : 19- 23: rinhv SnlGC pslrd F 6: 7.8401 72( 30) R-x(3,4)-S Occurences: 72(30) ANFB_BOVIN : 23- 27: lldrl Rdrv-S elqae ANFB_BOVIN : 88- 93: grrld RigslS glgcn ANFB_CANFA : 32- 36: hplgg Rspa-S easea ANFB_CANFA : 105- 109: vlqal Rrlr-S pkmmh ANFB_CANFA : 125- 130: grrld RigslS glgcn ANFB_HUMAN : 99- 103: vlytl Rapr-S pkmvq ANFB_HUMAN : 119- 123: grkmd Riss-S sglgc ANFB_HUMAN : 119- 124: grkmd RisssS glgck ANFB_MOUSE : 73- 77: kehpk Rvlr-S qgstl ANFB_MOUSE : 76- 80: pkrvl Rsqg-S tlrvq ANFB_MOUSE : 87- 91: lrvqq Rpqn-S kvthi ANFB_MOUSE : 106- 111: ghkid RigsvS rlgcn ANFB_PIG : 48- 52: lldrl Rdrv-S elqae ANFB_PIG : 96- 100: ifqvl Rgir-S pktmr ANFB_PIG : 116- 121: grrld RigslS glgcn ANFB_RAT : 73- 77: kellk Rvlr-S qdsaf ANFB_RAT : 76- 80: lkrvl Rsqd-S afriq ANFB_RAT : 87- 91: friqe Rlrn-S kmahs ANFB_RAT : 106- 111: gqkid RigavS rlgcd ANFC_ANGJA : 13- 18: glkld RigslS glgc ANFC_BOVIN : 22- 26: yshlt Rvap-S yakqa ANFC_CHICK : 13- 18: gvkld RigsmS glgc ANFC_HUMAN : 76- 81: llrdl RvdtkS raawa ANFC_HUMAN : 117- 122: glkld RigsmS glgc ANFC_PIG : 76- 81: llrdl RvdtkS raawa ANFC_PIG : 117- 122: glkld RigsmS glgc ANFC_RANCA : 43- 47: ednfe Rsfg-S deadq ANFC_RANCA : 120- 125: gvkld RigafS glgc ANFC_SCYCA : 3- 7: rp Rsdd-S lqtls ANFC_SCYCA : 86- 91: snnpl RfrgrS kkgps ANFC_SCYCA : 106- 111: gvkld RigamS glgc ANFC_SQUAC : 24- 28: vqarp Radd-S lqvls ANFC_SQUAC : 106- 111: snnpl RfkgrS kkgps ANFC_SQUAC : 126- 131: glkld RigamS glgc ANFD_RANCA : 50- 54: lvsge Rger-S idpkt ANFD_RANCA : 68- 73: llrdi RadtrS raawt ANFD_RANCA : 109- 114: glkld RigamS glgc ANFV_ANGJA : 13- 18: gtrmd RigswS glgcn ANF_ANGJA : 14- 19: ggkld RigsyS glgcn ANF_BOVIN : 98- 103: ggvlg RgpweS sdrsa ANF_BOVIN : 122- 127: lltap RslrrS scfgg ANF_BOVIN : 136- 141: ggrmd RigaqS glgcn ANF_CANFA : 97- 102: ggalg RspwdS sdrsa ANF_CANFA : 121- 126: llaap RslrrS scfgg ANF_CANFA : 135- 140: ggrmd RigaqS glgcn ANF_CAVPO : 74- 79: ggalg RgpwdS sdrsa ANF_CAVPO : 98- 103: lldap RslrrS scfgg ANF_CAVPO : 112- 117: ggrmd RigaqS slgcn ANF_CHICK : 4- 8: mdt Rgsf-S cgfll ANF_CHICK : 111- 116: gvqmp RmmrdS gcfgr ANF_CHICK : 125- 130: grrid RigslS gmgcn ANF_HORSE : 71- 75: qseee Raal-S plpev ANF_HORSE : 99- 104: ggalg RgswdS sdrsa ANF_HORSE : 123- 128: llaap RslrrS scfgg ANF_HORSE : 137- 142: ggrmd RigaqS glgcn ANF_HUMAN : 99- 104: ggalg RgpwdS sdrsa ANF_HUMAN : 123- 128: lltap RslrrS scfgg ANF_HUMAN : 137- 142: ggrmd RigaqS glgcn ANF_MOUSE : 91- 96: vnppl RdgsaS rrspw ANF_MOUSE : 122- 127: llagp RslrrS scfgg ANF_MOUSE : 136- 141: ggrid RigaqS glgcn ANF_PIG : 122- 127: llaap RslrrS scfgg ANF_PIG : 136- 141: ggrmd RigaqS glgcn ANF_RABIT : 123- 128: lltap RslrrS scfgg ANF_RABIT : 137- 142: ggrid RigaqS glgcn ANF_RANCA : 117- 122: llnap RsmrrS sdcfg ANF_RANCA : 132- 137: gsrid RigaqS gmgcg ANF_RANRI : 3- 8: ap RsmrrS sdcfg ANF_RANRI : 18- 23: gsrid RigaqS gmgcg ANF_RAT : 122- 127: llagp RslrrS scfgg ANF_RAT : 136- 141: ggrid RigaqS glgcn DNP_DENAN : 14- 19: ghkid RinhvS nlgcp DNP_DENAN : 30- 35: slrdp RpnapS tsa G 7: 7.3401 90( 30) R-x(2,4)-S Occurences: 90(30) ANFB_BOVIN : 23- 27: lldrl Rdrv-S elqae ANFB_BOVIN : 88- 91: grrld Rig--S lsglg ANFB_BOVIN : 88- 93: grrld RigslS glgcn ANFB_CANFA : 32- 36: hplgg Rspa-S easea ANFB_CANFA : 76- 79: leplh Rsh--S paeap ANFB_CANFA : 105- 109: vlqal Rrlr-S pkmmh ANFB_CANFA : 106- 109: lqalr Rlr--S pkmmh ANFB_CANFA : 125- 128: grrld Rig--S lsglg ANFB_CANFA : 125- 130: grrld RigslS glgcn ANFB_HUMAN : 99- 103: vlytl Rapr-S pkmvq ANFB_HUMAN : 119- 122: grkmd Ris--S ssglg ANFB_HUMAN : 119- 123: grkmd Riss-S sglgc ANFB_HUMAN : 119- 124: grkmd RisssS glgck ANFB_MOUSE : 49- 52: lleli Rek--S eemaq ANFB_MOUSE : 73- 77: kehpk Rvlr-S qgstl ANFB_MOUSE : 76- 80: pkrvl Rsqg-S tlrvq ANFB_MOUSE : 87- 91: lrvqq Rpqn-S kvthi ANFB_MOUSE : 106- 109: ghkid Rig--S vsrlg ANFB_MOUSE : 106- 111: ghkid RigsvS rlgcn ANFB_PIG : 48- 52: lldrl Rdrv-S elqae ANFB_PIG : 96- 100: ifqvl Rgir-S pktmr ANFB_PIG : 116- 119: grrld Rig--S lsglg ANFB_PIG : 116- 121: grrld RigslS glgcn ANFB_RAT : 49- 52: lleli Rek--S eemaq ANFB_RAT : 58- 61: eemaq Rql--S kdqgp ANFB_RAT : 73- 77: kellk Rvlr-S qdsaf ANFB_RAT : 76- 80: lkrvl Rsqd-S afriq ANFB_RAT : 87- 91: friqe Rlrn-S kmahs ANFB_RAT : 106- 111: gqkid RigavS rlgcd ANFC_ANGJA : 13- 16: glkld Rig--S lsglg ANFC_ANGJA : 13- 18: glkld RigslS glgc ANFC_BOVIN : 22- 26: yshlt Rvap-S yakqa ANFC_CHICK : 13- 16: gvkld Rig--S msglg ANFC_CHICK : 13- 18: gvkld RigsmS glgc ANFC_HUMAN : 76- 81: llrdl RvdtkS raawa ANFC_HUMAN : 117- 120: glkld Rig--S msglg ANFC_HUMAN : 117- 122: glkld RigsmS glgc ANFC_PIG : 76- 81: llrdl RvdtkS raawa ANFC_PIG : 117- 120: glkld Rig--S msglg ANFC_PIG : 117- 122: glkld RigsmS glgc ANFC_RANCA : 43- 47: ednfe Rsfg-S deadq ANFC_RANCA : 120- 125: gvkld RigafS glgc ANFC_SCYCA : 1- 4: Rpr--S ddslq ANFC_SCYCA : 3- 7: rp Rsdd-S lqtls ANFC_SCYCA : 86- 91: snnpl RfrgrS kkgps ANFC_SCYCA : 88- 91: nplrf Rgr--S kkgps ANFC_SCYCA : 106- 111: gvkld RigamS glgc ANFC_SQUAC : 24- 28: vqarp Radd-S lqvls ANFC_SQUAC : 106- 111: snnpl RfkgrS kkgps ANFC_SQUAC : 126- 131: glkld RigamS glgc ANFD_RANCA : 50- 54: lvsge Rger-S idpkt ANFD_RANCA : 68- 73: llrdi RadtrS raawt ANFD_RANCA : 109- 114: glkld RigamS glgc ANFV_ANGJA : 13- 16: gtrmd Rig--S wsglg ANFV_ANGJA : 13- 18: gtrmd RigswS glgcn ANF_ANGJA : 14- 17: ggkld Rig--S ysglg ANF_ANGJA : 14- 19: ggkld RigsyS glgcn ANF_BOVIN : 98- 103: ggvlg RgpweS sdrsa ANF_BOVIN : 122- 127: lltap RslrrS scfgg ANF_BOVIN : 125- 128: aprsl Rrs--S cfggr ANF_BOVIN : 136- 141: ggrmd RigaqS glgcn ANF_CANFA : 97- 102: ggalg RspwdS sdrsa ANF_CANFA : 121- 126: llaap RslrrS scfgg ANF_CANFA : 124- 127: aprsl Rrs--S cfggr ANF_CANFA : 135- 140: ggrmd RigaqS glgcn ANF_CAVPO : 74- 79: ggalg RgpwdS sdrsa ANF_CAVPO : 98- 103: lldap RslrrS scfgg ANF_CAVPO : 101- 104: aprsl Rrs--S cfggr ANF_CAVPO : 112- 117: ggrmd RigaqS slgcn ANF_CHICK : 4- 8: mdt Rgsf-S cgfll ANF_CHICK : 111- 116: gvqmp RmmrdS gcfgr ANF_CHICK : 125- 128: grrid Rig--S lsgmg ANF_CHICK : 125- 130: grrid RigslS gmgcn ANF_HORSE : 71- 75: qseee Raal-S plpev ANF_HORSE : 99- 104: ggalg RgswdS sdrsa ANF_HORSE : 123- 128: llaap RslrrS scfgg ANF_HORSE : 126- 129: aprsl Rrs--S cfggr ANF_HORSE : 137- 142: ggrmd RigaqS glgcn ANF_HUMAN : 99- 104: ggalg RgpwdS sdrsa ANF_HUMAN : 123- 128: lltap RslrrS scfgg ANF_HUMAN : 126- 129: aprsl Rrs--S cfggr ANF_HUMAN : 137- 142: ggrmd RigaqS glgcn ANF_MOUSE : 91- 94: vnppl Rdg--S asrrs ANF_MOUSE : 91- 96: vnppl RdgsaS rrspw ANF_MOUSE : 122- 127: llagp RslrrS scfgg ANF_MOUSE : 125- 128: gprsl Rrs--S cfggr ANF_MOUSE : 136- 141: ggrid RigaqS glgcn ANF_PIG : 122- 127: llaap RslrrS scfgg ANF_PIG : 125- 128: aprsl Rrs--S cfggr ANF_PIG : 136- 141: ggrmd RigaqS glgcn ANF_RABIT : 123- 128: lltap RslrrS scfgg ANF_RABIT : 126- 129: aprsl Rrs--S cfggr ANF_RABIT : 137- 142: ggrid RigaqS glgcn ANF_RANCA : 117- 122: llnap RsmrrS sdcfg ANF_RANCA : 120- 123: aprsm Rrs--S dcfgs ANF_RANCA : 132- 137: gsrid RigaqS gmgcg ANF_RANRI : 3- 8: ap RsmrrS sdcfg ANF_RANRI : 6- 9: aprsm Rrs--S dcfgs ANF_RANRI : 18- 23: gsrid RigaqS gmgcg ANF_RAT : 122- 127: llagp RslrrS scfgg ANF_RAT : 125- 128: gprsl Rrs--S cfggr ANF_RAT : 136- 141: ggrid RigaqS glgcn DNP_DENAN : 14- 19: ghkid RinhvS nlgcp DNP_DENAN : 30- 35: slrdp RpnapS tsa Number of patterns evaluated by Pratt:10 Total running time: 1 seconds