------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 51 sequences from file METALLOTHIONEIN_CL1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 51 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename METALLOTHIONEIN_CL1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: MT1A_BOVIN 61 MT1A_HORSE 60 MT1A_HUMAN 61 MT1A_RABIT 61 MT1B_HORSE 61 MT1B_HUMAN 61 MT1B_SHEEP 61 MT1C_SHEEP 61 MT1E_HUMAN 61 MT1F_HUMAN 61 MT1G_HUMAN 61 MT1H_HUMAN 61 MT1I_HUMAN 61 MT1K_HUMAN 62 MT1L_HUMAN 61 MT1_CERAE 61 MT1_COLLI 63 MT1_CRIGR 61 MT1_HOMAM 58 MT1_MOUSE 61 MT1_RAT 61 MT1_SCYSE 58 MT2A_RABIT 62 MT2B_RABIT 61 MT2C_RABIT 62 MT2D_RABIT 61 MT2E_RABIT 61 MT2_BOVIN 61 MT2_CERAE 61 MT2_COLLI 63 MT2_CRIGR 61 MT2_HUMAN 61 MT2_MESAU 61 MT2_MOUSE 61 MT2_RAT 61 MT2_SCYSE 57 MT2_STECO 61 MT3_BOVIN 68 MT3_HORSE 68 MT3_HUMAN 68 MT3_MOUSE 68 MT3_RAT 66 MTA_COLVI 43 MTA_ONCMY 61 MTB_COLVI 43 MTB_ONCMY 60 MT_CHICK 63 MT_ESOLU 60 MT_NOEBA 60 MT_PLEPL 60 MT_XENLA 62 Pratt run started at Thu Feb 6 20:17:16 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 28.1904 51( 51) C-x(2)-C-x(0,1)-C-x(2,3)-C-x(2)-C-x(3)-C-x-C 2: 27.6904 52( 51) C-x-C-x(0,2)-C-x(3,4)-C-x(2)-C-x(3)-C-x-C 3: 27.6904 51( 51) K-x(4)-C-x(0,2)-C-x(3,4)-C-x(2)-C-x(3)-C-x-C 4: 27.6904 51( 51) C-x-C-x(2)-C-x-C-x(2)-C-x(2,4)-C-x(2,3)-C 5: 24.5203 52( 51) C-x(2,3)-C-x-C-x(2)-C-x(4)-C-x(2)-C 6: 24.0203 51( 51) C-x(4)-C-x(2)-C-x(3)-C-x-C-x(0,2)-K 7: 24.0203 51( 51) C-x(2)-C-x-C-x(2)-C-x(2,4)-C-x(3)-C 8: 23.5203 99( 51) C-x(3,4)-C-x(2)-C-x(3)-C-x-C-x(0,2)-K 9: 23.5203 52( 51) C-x(2)-C-x-C-x(2)-C-x(2,4)-C-x(2,3)-C 10: 23.5203 51( 51) C-x(2)-C-x(0,1)-C-x(2)-C-x(2,4)-C-x(3)-C 11: 19.8503 51( 51) C-x(2)-C-x(3)-C-x-C-x(0,2)-K 12: 19.8503 51( 51) C-C-x(3)-C-x(1,2)-C-x(3,4)-C 13: 19.8503 98( 51) C-x(3)-C-x(0,1)-C-x(1,2)-C-x(4)-C 14: 19.8503 51( 51) C-x(2,3)-C-x-K-x(1,2)-C-x(2)-C 15: 19.8503 51( 51) C-x(4,5)-C-x-K-x(1,2)-C-x(3)-C 16: 19.8503 54( 51) C-x(4,5)-C-x(1,2)-K-x-C-x(3)-C 17: 19.8503 85( 51) C-x(0,1)-K-C-x(2,3)-C-x-C 18: 19.8503 86( 51) C-x(3)-C-x(0,1)-K-C-x(4,5)-C 19: 19.8503 85( 51) C-x(4,5)-K-C-x(2,3)-C-x-C 20: 19.3503 129( 51) C-x(0,1)-C-x(0,2)-S-C-x(4)-C Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 49.3911 51( 51) C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C-[CST]-[DPS]-[CG]-C-x(3)-[CNS]-x(3)-[ACSV]-x(2)-[CT]-x-[CS]-[EK] B 2: 48.8911 51( 51) C-x(2)-C-x(0,1)-C-x-[NPST]-C-x(2,4)-C-[CST]-[DPS]-[CG]-C-x(3)-[CNS]-x(3)-[ACSV]-x(2)-[CT]-x-[CS]-[EK] C 3: 39.4516 51( 51) C-x-C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C-x(2,3)-C-x-[ACPV]-x-[CDGNS]-x(3)-[ACS]-x(2)-[CGT] D 4: 39.4479 51( 51) C-[CT]-[DPS]-C-x(0,1)-C-x(2,3)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C E 5: 39.0726 51( 51) K-x-[ACG]-[CS]-x-C-x(0,2)-C-x(3,4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C F 6: 36.8319 51( 51) C-x(2,3)-C-x-C-x-[NST]-C-x(4)-C-x(2)-C-x(2)-[DEGS]-[CG]-x(3)-[ACNSV]-x-[DEGS] G 7: 35.2816 51( 51) C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C-x(2,3)-C-x-[ACPV]-x-[CDGNS]-x(3)-[ACS]-x(2)-[CGT] H 8: 34.0117 88( 51) C-x(2)-[GS]-C-x(0,1)-C-x(1,2)-C-x-[CP]-x(2)-C-x(2)-[ACS]-[ACSTV]-x(2)-[CD] I 9: 33.1163 52( 51) C-x-C-x(0,2)-C-x(3,4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C J 10: 31.6664 51( 51) C-x(4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C-x(0,2)-K-[DEGT] K 11: 31.1664 99( 51) C-x(3,4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C-x(0,2)-K-[DEGT] L 12: 27.9975 86( 51) C-x(0,1)-C-x(0,2)-S-C-x-[CP]-x(2)-C-x(3)-[ASTV]-x(4)-[CS] M 13: 27.4963 51( 51) C-x(2)-C-[ASTV]-x-[DG]-C-x-C-x(0,2)-K-[DEGT] N 14: 25.8047 51( 51) C-x(4,5)-C-x-K-x(1,2)-C-[CS]-x-[ACP]-C O 15: 24.7466 54( 51) C-x(4,5)-C-x(1,2)-K-[CGST]-C-[CDS]-x(2)-C P 16: 24.3555 77( 51) C-[AGPST]-x-[EGS]-C-x(0,1)-K-C-x(4,5)-C Q 17: 22.4989 51( 51) C-x(2,3)-C-x-K-x(1,2)-C-x-[CDS]-C R 18: 22.0479 51( 51) C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C S 19: 21.5479 51( 51) C-x(2)-C-x(0,1)-C-x-[NPST]-C-x(2,4)-C T 20: 19.8503 51( 51) C-C-x(3)-C-x(1,2)-C-x(3,4)-C Best patterns with alignements: fitness hits(seqs) Pattern A 1: 49.3911 51( 51) C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C-[CST]-[DPS]-[CG]-C-x(3)-[CNS]-x(3)-[ACSV]-x(2)-[CT]-x-[CS]-[EK] Occurences: 51(51) MT1A_BOVIN : 21- 51: agsct CkaCrCpSCkks-CCSCCpvgCakcAqgCvCK gasdk MT1A_HORSE : 21- 51: agsck CkeCrCtSCkks-CCSCCpggCarcAqgCvCK gasdk MT1A_HUMAN : 21- 51: tgsck CkeCkCnSCkks-CCSCCpmsCakcAqgCiCK gasek MT1A_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK gasdk MT1B_HORSE : 21- 51: agsck CkqCrCaSCkks-CCSCCpvgCakcAqgCvCK gasdk MT1B_HUMAN : 21- 51: agsck CkeCkCtSCkkc-CCSCCpvgCakcAqgCvCK gssek MT1B_SHEEP : 21- 51: agsct CkaCrCpSCkks-CCSCCpvgCakcAqgCvCK gasdk MT1C_SHEEP : 21- 51: agsct CkaCrCpSCkks-CCSCCpvgCakcAqgCiCK gasdk MT1E_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCvCK gasek MT1F_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCskcAqgCvCK gasek MT1G_HUMAN : 21- 51: assck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasek MT1H_HUMAN : 21- 51: agsck CkkCkCtSCkks-CCSCCplgCakcAqgCiCK gasek MT1I_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasek MT1K_HUMAN : 22- 52: assck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasek MT1L_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gtsdk MT1_CERAE : 21- 51: adsck CkeCkCtSCkks-CCSCCpvgCakcAqgCvCK gasek MT1_COLLI : 22- 52: gdnck CknCkCtSCkkg-CCSCCpagCakcAqgCvCK gppsa MT1_CRIGR : 21- 51: ssscg CkdCkCtSCkks-CCSCCpvgCskcAqgCvCK gasdk MT1_HOMAM : 22- 51: ktgck CtsCrCaPCek--CTSGCkcpSkdeCakTcSK pcxcc MT1_MOUSE : 21- 51: tssca CknCkCtSCkks-CCSCCpvgCskcAqgCvCK gaadk MT1_RAT : 21- 51: ssscg CknCkCtSCkks-CCSCCpvgCskcAqgCvCK gasdk MT1_SCYSE : 22- 51: kegcq CtsCrCsPCek--CSSGCkcaNkeeCskTcSK acscc MT2A_RABIT : 22- 52: ansct CkaCkCtSCkks-CCSCCppgCakcAqgCiCK gasdk MT2B_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK gasdk MT2C_RABIT : 22- 52: ansct CkaCkCtSCkks-CCSCCppgCakcAqgCiCK gasdk MT2D_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK gasdk MT2E_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK galdk MT2_BOVIN : 21- 51: agsck CkdCkCaSCkks-CCSCCpvgCakcAqgCvCK gasdk MT2_CERAE : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasdk MT2_COLLI : 22- 52: agsck CknCrCqSCrks-CCSCCrasCsncAkgCvCK epsss MT2_CRIGR : 21- 51: agsck CkeCkCtTCkks-CCSCCpvgCakcSqgCvCK easdk MT2_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasdk MT2_MESAU : 21- 51: sgsck CkeCkCtTCkks-CCSCCpvgCakcSqgCvCK easek MT2_MOUSE : 21- 51: agack CkqCkCtSCkks-CCSCCpvgCakcSqgCiCK easdk MT2_RAT : 21- 51: agsck CkqCkCtSCkks-CCSCCpvgCakcSqgCiCK easdk MT2_SCYSE : 22- 51: ktgck CtsCrCpPCeq--CSSGCkcaNkedCrkTcSK pcscc MT2_STECO : 21- 51: pgsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasdk MT3_BOVIN : 22- 52: sdpck CegCtCaSCkks-CCSCCpaeCekcAkdCvCK ggega MT3_HORSE : 22- 52: sgeck CegCkCtSCkks-CCSCCpaeCekcAkdCvCK ggega MT3_HUMAN : 22- 52: adsck CegCkCtSCkks-CCSCCpaeCekcAkdCvCK ggeaa MT3_MOUSE : 22- 52: sdkck CkgCkCtNCkks-CCSCCpagCekcAkdCvCK geega MT3_RAT : 22- 52: sdkck CkgCkCtNCkks-CCSCCpagCekcAkdCvCK geega MTA_COLVI : 8- 38: agsck CknCrCrSCrks-CCSCCpagCnncAkgCvCK epass MTA_ONCMY : 20- 51: ggsck CsnCaCtSCkkasCCDCCpsgCskcAsgCvCK gktcd MTB_COLVI : 8- 38: agsck CknCrCrSCrks-CCSCCpagCnncVkgCvCK epass MTB_ONCMY : 20- 50: ggsck CsnCaCtSCkks-CCPCCpsdCskcAsgCvCK gktcd MT_CHICK : 22- 52: agsck CknCrCrSCrks-CCSCCpagCnncAkgCvCK epass MT_ESOLU : 20- 50: ggsck CsnCaCtSCkks-CCSCCpsgCskcAsgCiCK gktcd MT_NOEBA : 20- 50: gatck CtnCqCtTCkks-CCSCCpsgCskcAsgCvCK gnscd MT_PLEPL : 20- 50: ggsct CknCsCtTCnks-CCPCCpsgCpkcAsgCvCK gktcd MT_XENLA : 22- 52: gttcs CsnCkCtSCkks-CCSCCpaeCskcSqgChCE kgskk B 2: 48.8911 51( 51) C-x(2)-C-x(0,1)-C-x-[NPST]-C-x(2,4)-C-[CST]-[DPS]-[CG]-C-x(3)-[CNS]-x(3)-[ACSV]-x(2)-[CT]-x-[CS]-[EK] Occurences: 51(51) MT1A_BOVIN : 21- 51: agsct CkaCrCpSCkks-CCSCCpvgCakcAqgCvCK gasdk MT1A_HORSE : 21- 51: agsck CkeCrCtSCkks-CCSCCpggCarcAqgCvCK gasdk MT1A_HUMAN : 21- 51: tgsck CkeCkCnSCkks-CCSCCpmsCakcAqgCiCK gasek MT1A_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK gasdk MT1B_HORSE : 21- 51: agsck CkqCrCaSCkks-CCSCCpvgCakcAqgCvCK gasdk MT1B_HUMAN : 21- 51: agsck CkeCkCtSCkkc-CCSCCpvgCakcAqgCvCK gssek MT1B_SHEEP : 21- 51: agsct CkaCrCpSCkks-CCSCCpvgCakcAqgCvCK gasdk MT1C_SHEEP : 21- 51: agsct CkaCrCpSCkks-CCSCCpvgCakcAqgCiCK gasdk MT1E_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCvCK gasek MT1F_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCskcAqgCvCK gasek MT1G_HUMAN : 21- 51: assck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasek MT1H_HUMAN : 21- 51: agsck CkkCkCtSCkks-CCSCCplgCakcAqgCiCK gasek MT1I_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasek MT1K_HUMAN : 22- 52: assck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasek MT1L_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gtsdk MT1_CERAE : 21- 51: adsck CkeCkCtSCkks-CCSCCpvgCakcAqgCvCK gasek MT1_COLLI : 22- 52: gdnck CknCkCtSCkkg-CCSCCpagCakcAqgCvCK gppsa MT1_CRIGR : 21- 51: ssscg CkdCkCtSCkks-CCSCCpvgCskcAqgCvCK gasdk MT1_HOMAM : 22- 51: ktgck CtsCrCaPCek--CTSGCkcpSkdeCakTcSK pcxcc MT1_MOUSE : 21- 51: tssca CknCkCtSCkks-CCSCCpvgCskcAqgCvCK gaadk MT1_RAT : 21- 51: ssscg CknCkCtSCkks-CCSCCpvgCskcAqgCvCK gasdk MT1_SCYSE : 22- 51: kegcq CtsCrCsPCek--CSSGCkcaNkeeCskTcSK acscc MT2A_RABIT : 22- 52: ansct CkaCkCtSCkks-CCSCCppgCakcAqgCiCK gasdk MT2B_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK gasdk MT2C_RABIT : 22- 52: ansct CkaCkCtSCkks-CCSCCppgCakcAqgCiCK gasdk MT2D_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK gasdk MT2E_RABIT : 21- 51: assck CkeCkCtSCkks-CCSCCpagCtkcAqgCiCK galdk MT2_BOVIN : 21- 51: agsck CkdCkCaSCkks-CCSCCpvgCakcAqgCvCK gasdk MT2_CERAE : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasdk MT2_COLLI : 22- 52: agsck CknCrCqSCrks-CCSCCrasCsncAkgCvCK epsss MT2_CRIGR : 21- 51: agsck CkeCkCtTCkks-CCSCCpvgCakcSqgCvCK easdk MT2_HUMAN : 21- 51: agsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasdk MT2_MESAU : 21- 51: sgsck CkeCkCtTCkks-CCSCCpvgCakcSqgCvCK easek MT2_MOUSE : 21- 51: agack CkqCkCtSCkks-CCSCCpvgCakcSqgCiCK easdk MT2_RAT : 21- 51: agsck CkqCkCtSCkks-CCSCCpvgCakcSqgCiCK easdk MT2_SCYSE : 22- 51: ktgck CtsCrCpPCeq--CSSGCkcaNkedCrkTcSK pcscc MT2_STECO : 21- 51: pgsck CkeCkCtSCkks-CCSCCpvgCakcAqgCiCK gasdk MT3_BOVIN : 22- 52: sdpck CegCtCaSCkks-CCSCCpaeCekcAkdCvCK ggega MT3_HORSE : 22- 52: sgeck CegCkCtSCkks-CCSCCpaeCekcAkdCvCK ggega MT3_HUMAN : 22- 52: adsck CegCkCtSCkks-CCSCCpaeCekcAkdCvCK ggeaa MT3_MOUSE : 22- 52: sdkck CkgCkCtNCkks-CCSCCpagCekcAkdCvCK geega MT3_RAT : 22- 52: sdkck CkgCkCtNCkks-CCSCCpagCekcAkdCvCK geega MTA_COLVI : 8- 38: agsck CknCrCrSCrks-CCSCCpagCnncAkgCvCK epass MTA_ONCMY : 20- 51: ggsck CsnCaCtSCkkasCCDCCpsgCskcAsgCvCK gktcd MTB_COLVI : 8- 38: agsck CknCrCrSCrks-CCSCCpagCnncVkgCvCK epass MTB_ONCMY : 20- 50: ggsck CsnCaCtSCkks-CCPCCpsdCskcAsgCvCK gktcd MT_CHICK : 22- 52: agsck CknCrCrSCrks-CCSCCpagCnncAkgCvCK epass MT_ESOLU : 20- 50: ggsck CsnCaCtSCkks-CCSCCpsgCskcAsgCiCK gktcd MT_NOEBA : 20- 50: gatck CtnCqCtTCkks-CCSCCpsgCskcAsgCvCK gnscd MT_PLEPL : 20- 50: ggsct CknCsCtTCnks-CCPCCpsgCpkcAsgCvCK gktcd MT_XENLA : 22- 52: gttcs CsnCkCtSCkks-CCSCCpaeCskcSqgChCE kgskk C 3: 39.4516 51( 51) C-x-C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C-x(2,3)-C-x-[ACPV]-x-[CDGNS]-x(3)-[ACS]-x(2)-[CGT] Occurences: 51(51) MT1A_BOVIN : 19- 47: scags CtCkaCrCpSCkks-Ccs-CcPvGcakCaqG cvckg MT1A_BOVIN : 19- 48: scags CtCkaCrCpSCkkscCsc-CpVgCakcAqgC vckga MT1A_BOVIN : 19- 48: scags CtCkaCrCpSCkks-CcscCpVgCakcAqgC vckga MT1A_HORSE : 19- 47: tcags CkCkeCrCtSCkks-Ccs-CcPgGcarCaqG cvckg MT1A_HUMAN : 19- 47: tctgs CkCkeCkCnSCkks-Ccs-CcPmScakCaqG cickg MT1A_RABIT : 19- 47: tcass CkCkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT1A_RABIT : 19- 48: tcass CkCkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT1A_RABIT : 19- 48: tcass CkCkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT1B_HORSE : 19- 47: tcags CkCkqCrCaSCkks-Ccs-CcPvGcakCaqG cvckg MT1B_HORSE : 19- 48: tcags CkCkqCrCaSCkkscCsc-CpVgCakcAqgC vckga MT1B_HORSE : 19- 48: tcags CkCkqCrCaSCkks-CcscCpVgCakcAqgC vckga MT1B_HUMAN : 19- 47: acags CkCkeCkCtSCkkc-Ccs-CcPvGcakCaqG cvckg MT1B_HUMAN : 19- 48: acags CkCkeCkCtSCkkccCsc-CpVgCakcAqgC vckgs MT1B_HUMAN : 19- 47: acags CkCkeCkCtSCkk--CccsCcPvGcakCaqG cvckg MT1B_HUMAN : 19- 48: acags CkCkeCkCtSCkkc-CcscCpVgCakcAqgC vckgs MT1B_SHEEP : 19- 47: scags CtCkaCrCpSCkks-Ccs-CcPvGcakCaqG cvckg MT1B_SHEEP : 19- 48: scags CtCkaCrCpSCkkscCsc-CpVgCakcAqgC vckga MT1B_SHEEP : 19- 48: scags CtCkaCrCpSCkks-CcscCpVgCakcAqgC vckga MT1C_SHEEP : 19- 47: scags CtCkaCrCpSCkks-Ccs-CcPvGcakCaqG cickg MT1C_SHEEP : 19- 48: scags CtCkaCrCpSCkkscCsc-CpVgCakcAqgC ickga MT1C_SHEEP : 19- 48: scags CtCkaCrCpSCkks-CcscCpVgCakcAqgC ickga MT1E_HUMAN : 19- 47: tcags CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cvckg MT1E_HUMAN : 19- 48: tcags CkCkeCkCtSCkkscCsc-CpVgCakcAqgC vckga MT1E_HUMAN : 19- 48: tcags CkCkeCkCtSCkks-CcscCpVgCakcAqgC vckga MT1F_HUMAN : 19- 47: tcags CkCkeCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1F_HUMAN : 19- 48: tcags CkCkeCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1F_HUMAN : 19- 48: tcags CkCkeCkCtSCkks-CcscCpVgCskcAqgC vckga MT1G_HUMAN : 19- 47: tcass CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1G_HUMAN : 19- 48: tcass CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT1G_HUMAN : 19- 48: tcass CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT1H_HUMAN : 19- 47: acags CkCkkCkCtSCkks-Ccs-CcPlGcakCaqG cickg MT1I_HUMAN : 19- 47: tcags CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1I_HUMAN : 19- 48: tcags CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT1I_HUMAN : 19- 48: tcags CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT1K_HUMAN : 20- 48: tcass CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1K_HUMAN : 20- 49: tcass CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT1K_HUMAN : 20- 49: tcass CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT1L_HUMAN : 19- 47: acags CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1L_HUMAN : 19- 48: acags CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickgt MT1L_HUMAN : 19- 48: acags CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickgt MT1_CERAE : 19- 47: tcads CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cvckg MT1_CERAE : 19- 48: tcads CkCkeCkCtSCkkscCsc-CpVgCakcAqgC vckga MT1_CERAE : 19- 48: tcads CkCkeCkCtSCkks-CcscCpVgCakcAqgC vckga MT1_COLLI : 20- 48: tcgdn CkCknCkCtSCkkg-Ccs-CcPaGcakCaqG cvckg MT1_COLLI : 20- 49: tcgdn CkCknCkCtSCkkgcCsc-CpAgCakcAqgC vckgp MT1_COLLI : 20- 49: tcgdn CkCknCkCtSCkkg-CcscCpAgCakcAqgC vckgp MT1_CRIGR : 19- 47: tcsss CgCkdCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1_CRIGR : 19- 48: tcsss CgCkdCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1_CRIGR : 19- 48: tcsss CgCkdCkCtSCkks-CcscCpVgCskcAqgC vckga MT1_HOMAM : 20- 48: gcktg CkCtsCrCaPCek--CtsgCkCpSkdeCakT cskpc MT1_MOUSE : 19- 47: tctss CaCknCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1_MOUSE : 19- 48: tctss CaCknCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1_MOUSE : 19- 48: tctss CaCknCkCtSCkks-CcscCpVgCskcAqgC vckga MT1_RAT : 19- 47: tcsss CgCknCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1_RAT : 19- 48: tcsss CgCknCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1_RAT : 19- 48: tcsss CgCknCkCtSCkks-CcscCpVgCskcAqgC vckga MT1_SCYSE : 20- 48: gckeg CqCtsCrCsPCek--CssgCkCaNkeeCskT cskac MT2A_RABIT : 20- 48: tcans CtCkaCkCtSCkks-Ccs-CcPpGcakCaqG cickg MT2A_RABIT : 20- 49: tcans CtCkaCkCtSCkkscCsc-CpPgCakcAqgC ickga MT2A_RABIT : 20- 49: tcans CtCkaCkCtSCkks-CcscCpPgCakcAqgC ickga MT2B_RABIT : 19- 47: tcass CkCkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT2B_RABIT : 19- 48: tcass CkCkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT2B_RABIT : 19- 48: tcass CkCkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT2C_RABIT : 20- 48: tcans CtCkaCkCtSCkks-Ccs-CcPpGcakCaqG cickg MT2C_RABIT : 20- 49: tcans CtCkaCkCtSCkkscCsc-CpPgCakcAqgC ickga MT2C_RABIT : 20- 49: tcans CtCkaCkCtSCkks-CcscCpPgCakcAqgC ickga MT2D_RABIT : 19- 47: acass CkCkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT2D_RABIT : 19- 48: acass CkCkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT2D_RABIT : 19- 48: acass CkCkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT2E_RABIT : 19- 47: acass CkCkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT2E_RABIT : 19- 48: acass CkCkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT2E_RABIT : 19- 48: acass CkCkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT2_BOVIN : 19- 47: tcags CkCkdCkCaSCkks-Ccs-CcPvGcakCaqG cvckg MT2_BOVIN : 19- 48: tcags CkCkdCkCaSCkkscCsc-CpVgCakcAqgC vckga MT2_BOVIN : 19- 48: tcags CkCkdCkCaSCkks-CcscCpVgCakcAqgC vckga MT2_CERAE : 19- 47: tcags CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT2_CERAE : 19- 48: tcags CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT2_CERAE : 19- 48: tcags CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT2_COLLI : 20- 49: scags CkCknCrCqSCrkscCsc-CrAsCsncAkgC vckep MT2_COLLI : 20- 49: scags CkCknCrCqSCrks-CcscCrAsCsncAkgC vckep MT2_CRIGR : 19- 47: scags CkCkeCkCtTCkks-Ccs-CcPvGcakCsqG cvcke MT2_CRIGR : 19- 48: scags CkCkeCkCtTCkkscCsc-CpVgCakcSqgC vckea MT2_CRIGR : 19- 48: scags CkCkeCkCtTCkks-CcscCpVgCakcSqgC vckea MT2_HUMAN : 19- 47: tcags CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT2_HUMAN : 19- 48: tcags CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT2_HUMAN : 19- 48: tcags CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT2_MESAU : 19- 47: scsgs CkCkeCkCtTCkks-Ccs-CcPvGcakCsqG cvcke MT2_MESAU : 19- 48: scsgs CkCkeCkCtTCkkscCsc-CpVgCakcSqgC vckea MT2_MESAU : 19- 48: scsgs CkCkeCkCtTCkks-CcscCpVgCakcSqgC vckea MT2_MOUSE : 19- 47: scaga CkCkqCkCtSCkks-Ccs-CcPvGcakCsqG cicke MT2_MOUSE : 19- 48: scaga CkCkqCkCtSCkkscCsc-CpVgCakcSqgC ickea MT2_MOUSE : 19- 48: scaga CkCkqCkCtSCkks-CcscCpVgCakcSqgC ickea MT2_RAT : 19- 47: scags CkCkqCkCtSCkks-Ccs-CcPvGcakCsqG cicke MT2_RAT : 19- 48: scags CkCkqCkCtSCkkscCsc-CpVgCakcSqgC ickea MT2_RAT : 19- 48: scags CkCkqCkCtSCkks-CcscCpVgCakcSqgC ickea MT2_SCYSE : 20- 48: ecktg CkCtsCrCpPCeq--CssgCkCaNkedCrkT cskpc MT2_STECO : 19- 47: acpgs CkCkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT2_STECO : 19- 48: acpgs CkCkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT2_STECO : 19- 48: acpgs CkCkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT3_BOVIN : 20- 49: tcsdp CkCegCtCaSCkkscCsc-CpAeCekcAkdC vckgg MT3_BOVIN : 20- 49: tcsdp CkCegCtCaSCkks-CcscCpAeCekcAkdC vckgg MT3_HORSE : 20- 49: tcsge CkCegCkCtSCkkscCsc-CpAeCekcAkdC vckgg MT3_HORSE : 20- 49: tcsge CkCegCkCtSCkks-CcscCpAeCekcAkdC vckgg MT3_HUMAN : 20- 49: tcads CkCegCkCtSCkkscCsc-CpAeCekcAkdC vckgg MT3_HUMAN : 20- 49: tcads CkCegCkCtSCkks-CcscCpAeCekcAkdC vckgg MT3_MOUSE : 20- 49: tcsdk CkCkgCkCtNCkkscCsc-CpAgCekcAkdC vckge MT3_MOUSE : 20- 49: tcsdk CkCkgCkCtNCkks-CcscCpAgCekcAkdC vckge MT3_RAT : 20- 49: tcsdk CkCkgCkCtNCkkscCsc-CpAgCekcAkdC vckge MT3_RAT : 20- 49: tcsdk CkCkgCkCtNCkks-CcscCpAgCekcAkdC vckge MTA_COLVI : 6- 34: scags CkCknCrCrSCrks-Ccs-CcPaGcnnCakG cvcke MTA_COLVI : 6- 35: scags CkCknCrCrSCrkscCsc-CpAgCnncAkgC vckep MTA_COLVI : 6- 35: scags CkCknCrCrSCrks-CcscCpAgCnncAkgC vckep MTA_ONCMY : 18- 47: ncggs CkCsnCaCtSCkkasCcd-CcPsGcskCasG cvckg MTB_COLVI : 6- 34: scags CkCknCrCrSCrks-Ccs-CcPaGcnnCvkG cvcke MTB_ONCMY : 18- 46: ncggs CkCsnCaCtSCkks-Ccp-CcPsDcskCasG cvckg MT_CHICK : 20- 48: scags CkCknCrCrSCrks-Ccs-CcPaGcnnCakG cvcke MT_CHICK : 20- 49: scags CkCknCrCrSCrkscCsc-CpAgCnncAkgC vckep MT_CHICK : 20- 49: scags CkCknCrCrSCrks-CcscCpAgCnncAkgC vckep MT_ESOLU : 18- 46: ncggs CkCsnCaCtSCkks-Ccs-CcPsGcskCasG cickg MT_NOEBA : 18- 46: ncgat CkCtnCqCtTCkks-Ccs-CcPsGcskCasG cvckg MT_PLEPL : 18- 46: ncggs CtCknCsCtTCnks-Ccp-CcPsGcpkCasG cvckg MT_XENLA : 20- 49: scgtt CsCsnCkCtSCkkscCsc-CpAeCskcSqgC hcekg MT_XENLA : 20- 49: scgtt CsCsnCkCtSCkks-CcscCpAeCskcSqgC hcekg D 4: 39.4479 51( 51) C-[CT]-[DPS]-C-x(0,1)-C-x(2,3)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C Occurences: 51(51) MT1A_BOVIN : 33- 50: sckks CCSC-CpvgCakCAqGCvC kgasd MT1A_HORSE : 33- 50: sckks CCSC-CpggCarCAqGCvC kgasd MT1A_HUMAN : 33- 50: sckks CCSC-CpmsCakCAqGCiC kgase MT1A_RABIT : 33- 50: sckks CCSC-CpagCtkCAqGCiC kgasd MT1B_HORSE : 33- 50: sckks CCSC-CpvgCakCAqGCvC kgasd MT1B_HUMAN : 33- 50: sckkc CCSC-CpvgCakCAqGCvC kgsse MT1B_SHEEP : 33- 50: sckks CCSC-CpvgCakCAqGCvC kgasd MT1C_SHEEP : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgasd MT1E_HUMAN : 33- 50: sckks CCSC-CpvgCakCAqGCvC kgase MT1F_HUMAN : 33- 50: sckks CCSC-CpvgCskCAqGCvC kgase MT1G_HUMAN : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgase MT1H_HUMAN : 33- 50: sckks CCSC-CplgCakCAqGCiC kgase MT1I_HUMAN : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgase MT1K_HUMAN : 34- 51: sckks CCSC-CpvgCakCAqGCiC kgase MT1L_HUMAN : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgtsd MT1_CERAE : 33- 50: sckks CCSC-CpvgCakCAqGCvC kgase MT1_COLLI : 34- 51: sckkg CCSC-CpagCakCAqGCvC kgpps MT1_CRIGR : 33- 50: sckks CCSC-CpvgCskCAqGCvC kgasd MT1_HOMAM : 22- 39: ktgck CTSCrCap-CekCTsGCkC pskde MT1_MOUSE : 33- 50: sckks CCSC-CpvgCskCAqGCvC kgaad MT1_RAT : 33- 50: sckks CCSC-CpvgCskCAqGCvC kgasd MT1_SCYSE : 22- 39: kegcq CTSCrCsp-CekCSsGCkC ankee MT2A_RABIT : 34- 51: sckks CCSC-CppgCakCAqGCiC kgasd MT2B_RABIT : 33- 50: sckks CCSC-CpagCtkCAqGCiC kgasd MT2C_RABIT : 34- 51: sckks CCSC-CppgCakCAqGCiC kgasd MT2D_RABIT : 33- 50: sckks CCSC-CpagCtkCAqGCiC kgasd MT2E_RABIT : 33- 50: sckks CCSC-CpagCtkCAqGCiC kgald MT2_BOVIN : 33- 50: sckks CCSC-CpvgCakCAqGCvC kgasd MT2_CERAE : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgasd MT2_COLLI : 34- 51: scrks CCSC-CrasCsnCAkGCvC kepss MT2_CRIGR : 33- 50: tckks CCSC-CpvgCakCSqGCvC keasd MT2_HUMAN : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgasd MT2_MESAU : 33- 50: tckks CCSC-CpvgCakCSqGCvC kease MT2_MOUSE : 33- 50: sckks CCSC-CpvgCakCSqGCiC keasd MT2_RAT : 33- 50: sckks CCSC-CpvgCakCSqGCiC keasd MT2_SCYSE : 22- 39: ktgck CTSCrCpp-CeqCSsGCkC anked MT2_STECO : 33- 50: sckks CCSC-CpvgCakCAqGCiC kgasd MT3_BOVIN : 34- 51: sckks CCSC-CpaeCekCAkDCvC kggeg MT3_HORSE : 34- 51: sckks CCSC-CpaeCekCAkDCvC kggeg MT3_HUMAN : 34- 51: sckks CCSC-CpaeCekCAkDCvC kggea MT3_MOUSE : 34- 51: nckks CCSC-CpagCekCAkDCvC kgeeg MT3_RAT : 34- 51: nckks CCSC-CpagCekCAkDCvC kgeeg MTA_COLVI : 20- 37: scrks CCSC-CpagCnnCAkGCvC kepas MTA_ONCMY : 33- 50: ckkas CCDC-CpsgCskCAsGCvC kgktc MTB_COLVI : 20- 37: scrks CCSC-CpagCnnCVkGCvC kepas MTB_ONCMY : 32- 49: sckks CCPC-CpsdCskCAsGCvC kgktc MT_CHICK : 34- 51: scrks CCSC-CpagCnnCAkGCvC kepas MT_ESOLU : 32- 49: sckks CCSC-CpsgCskCAsGCiC kgktc MT_NOEBA : 32- 49: tckks CCSC-CpsgCskCAsGCvC kgnsc MT_PLEPL : 32- 49: tcnks CCPC-CpsgCpkCAsGCvC kgktc MT_XENLA : 34- 51: sckks CCSC-CpaeCskCSqGChC ekgsk E 5: 39.0726 51( 51) K-x-[ACG]-[CS]-x-C-x(0,2)-C-x(3,4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C Occurences: 51(51) MT1A_BOVIN : 31- 50: cpsck KsCCsC--Cpvg-CakCAqGCvC kgasd MT1A_HORSE : 31- 50: ctsck KsCCsC--Cpgg-CarCAqGCvC kgasd MT1A_HUMAN : 31- 50: cnsck KsCCsC--Cpms-CakCAqGCiC kgase MT1A_RABIT : 31- 50: ctsck KsCCsC--Cpag-CtkCAqGCiC kgasd MT1B_HORSE : 31- 50: casck KsCCsC--Cpvg-CakCAqGCvC kgasd MT1B_HUMAN : 31- 50: ctsck KcCCsC--Cpvg-CakCAqGCvC kgsse MT1B_SHEEP : 31- 50: cpsck KsCCsC--Cpvg-CakCAqGCvC kgasd MT1C_SHEEP : 31- 50: cpsck KsCCsC--Cpvg-CakCAqGCiC kgasd MT1E_HUMAN : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCvC kgase MT1F_HUMAN : 31- 50: ctsck KsCCsC--Cpvg-CskCAqGCvC kgase MT1G_HUMAN : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCiC kgase MT1H_HUMAN : 31- 50: ctsck KsCCsC--Cplg-CakCAqGCiC kgase MT1I_HUMAN : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCiC kgase MT1K_HUMAN : 32- 51: ctsck KsCCsC--Cpvg-CakCAqGCiC kgase MT1L_HUMAN : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCiC kgtsd MT1_CERAE : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCvC kgase MT1_COLLI : 32- 51: ctsck KgCCsC--Cpag-CakCAqGCvC kgpps MT1_CRIGR : 31- 50: ctsck KsCCsC--Cpvg-CskCAqGCvC kgasd MT1_HOMAM : 17- 39: aeggc KtGCkCtsCrcapCekCTsGCkC pskde MT1_MOUSE : 31- 50: ctsck KsCCsC--Cpvg-CskCAqGCvC kgaad MT1_RAT : 31- 50: ctsck KsCCsC--Cpvg-CskCAqGCvC kgasd MT1_SCYSE : 17- 39: keggc KeGCqCtsCrcspCekCSsGCkC ankee MT2A_RABIT : 32- 51: ctsck KsCCsC--Cppg-CakCAqGCiC kgasd MT2B_RABIT : 31- 50: ctsck KsCCsC--Cpag-CtkCAqGCiC kgasd MT2C_RABIT : 32- 51: ctsck KsCCsC--Cppg-CakCAqGCiC kgasd MT2D_RABIT : 31- 50: ctsck KsCCsC--Cpag-CtkCAqGCiC kgasd MT2E_RABIT : 31- 50: ctsck KsCCsC--Cpag-CtkCAqGCiC kgald MT2_BOVIN : 31- 50: casck KsCCsC--Cpvg-CakCAqGCvC kgasd MT2_CERAE : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCiC kgasd MT2_COLLI : 32- 51: cqscr KsCCsC--Cras-CsnCAkGCvC kepss MT2_CRIGR : 31- 50: cttck KsCCsC--Cpvg-CakCSqGCvC keasd MT2_HUMAN : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCiC kgasd MT2_MESAU : 31- 50: cttck KsCCsC--Cpvg-CakCSqGCvC kease MT2_MOUSE : 31- 50: ctsck KsCCsC--Cpvg-CakCSqGCiC keasd MT2_RAT : 31- 50: ctsck KsCCsC--Cpvg-CakCSqGCiC keasd MT2_SCYSE : 17- 39: kegec KtGCkCtsCrcppCeqCSsGCkC anked MT2_STECO : 31- 50: ctsck KsCCsC--Cpvg-CakCAqGCiC kgasd MT3_BOVIN : 32- 51: casck KsCCsC--Cpae-CekCAkDCvC kggeg MT3_HORSE : 32- 51: ctsck KsCCsC--Cpae-CekCAkDCvC kggeg MT3_HUMAN : 32- 51: ctsck KsCCsC--Cpae-CekCAkDCvC kggea MT3_MOUSE : 32- 51: ctnck KsCCsC--Cpag-CekCAkDCvC kgeeg MT3_RAT : 32- 51: ctnck KsCCsC--Cpag-CekCAkDCvC kgeeg MTA_COLVI : 18- 37: crscr KsCCsC--Cpag-CnnCAkGCvC kepas MTA_ONCMY : 29- 50: actsc KkAScCdcCpsg-CskCAsGCvC kgktc MTA_ONCMY : 29- 50: actsc KkAScCd-CcpsgCskCAsGCvC kgktc MTB_COLVI : 18- 37: crscr KsCCsC--Cpag-CnnCVkGCvC kepas MTB_ONCMY : 30- 49: ctsck KsCCpC--Cpsd-CskCAsGCvC kgktc MT_CHICK : 32- 51: crscr KsCCsC--Cpag-CnnCAkGCvC kepas MT_ESOLU : 30- 49: ctsck KsCCsC--Cpsg-CskCAsGCiC kgktc MT_NOEBA : 30- 49: cttck KsCCsC--Cpsg-CskCAsGCvC kgnsc MT_PLEPL : 30- 49: cttcn KsCCpC--Cpsg-CpkCAsGCvC kgktc MT_XENLA : 32- 51: ctsck KsCCsC--Cpae-CskCSqGChC ekgsk F 6: 36.8319 51( 51) C-x(2,3)-C-x-C-x-[NST]-C-x(4)-C-x(2)-C-x(2)-[DEGS]-[CG]-x(3)-[ACNSV]-x-[DEGS] Occurences: 51(51) MT1A_BOVIN : 21- 47: agsct Cka-CrCpSCkkscCscCpvGCakcAqG cvckg MT1A_HORSE : 21- 47: agsck Cke-CrCtSCkkscCscCpgGCarcAqG cvckg MT1A_HUMAN : 21- 47: tgsck Cke-CkCnSCkkscCscCpmSCakcAqG cickg MT1A_RABIT : 21- 47: assck Cke-CkCtSCkkscCscCpaGCtkcAqG cickg MT1B_HORSE : 21- 47: agsck Ckq-CrCaSCkkscCscCpvGCakcAqG cvckg MT1B_HUMAN : 21- 47: agsck Cke-CkCtSCkkccCscCpvGCakcAqG cvckg MT1B_SHEEP : 21- 47: agsct Cka-CrCpSCkkscCscCpvGCakcAqG cvckg MT1C_SHEEP : 21- 47: agsct Cka-CrCpSCkkscCscCpvGCakcAqG cickg MT1E_HUMAN : 21- 47: agsck Cke-CkCtSCkkscCscCpvGCakcAqG cvckg MT1F_HUMAN : 21- 47: agsck Cke-CkCtSCkkscCscCpvGCskcAqG cvckg MT1G_HUMAN : 21- 47: assck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT1H_HUMAN : 21- 47: agsck Ckk-CkCtSCkkscCscCplGCakcAqG cickg MT1I_HUMAN : 21- 47: agsck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT1K_HUMAN : 22- 48: assck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT1L_HUMAN : 21- 47: agsck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT1_CERAE : 21- 47: adsck Cke-CkCtSCkkscCscCpvGCakcAqG cvckg MT1_COLLI : 22- 48: gdnck Ckn-CkCtSCkkgcCscCpaGCakcAqG cvckg MT1_CRIGR : 21- 47: ssscg Ckd-CkCtSCkkscCscCpvGCskcAqG cvckg MT1_HOMAM : 16- 43: caegg CktgCkCtSCrcapCekCtsGCkcpSkD ecakt MT1_MOUSE : 21- 47: tssca Ckn-CkCtSCkkscCscCpvGCskcAqG cvckg MT1_RAT : 21- 47: ssscg Ckn-CkCtSCkkscCscCpvGCskcAqG cvckg MT1_SCYSE : 16- 43: ckegg CkegCqCtSCrcspCekCssGCkcaNkE ecskt MT2A_RABIT : 22- 48: ansct Cka-CkCtSCkkscCscCppGCakcAqG cickg MT2B_RABIT : 21- 47: assck Cke-CkCtSCkkscCscCpaGCtkcAqG cickg MT2C_RABIT : 22- 48: ansct Cka-CkCtSCkkscCscCppGCakcAqG cickg MT2D_RABIT : 21- 47: assck Cke-CkCtSCkkscCscCpaGCtkcAqG cickg MT2E_RABIT : 21- 47: assck Cke-CkCtSCkkscCscCpaGCtkcAqG cickg MT2_BOVIN : 21- 47: agsck Ckd-CkCaSCkkscCscCpvGCakcAqG cvckg MT2_CERAE : 21- 47: agsck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT2_COLLI : 22- 48: agsck Ckn-CrCqSCrkscCscCraSCsncAkG cvcke MT2_CRIGR : 21- 47: agsck Cke-CkCtTCkkscCscCpvGCakcSqG cvcke MT2_HUMAN : 21- 47: agsck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT2_MESAU : 21- 47: sgsck Cke-CkCtTCkkscCscCpvGCakcSqG cvcke MT2_MOUSE : 21- 47: agack Ckq-CkCtSCkkscCscCpvGCakcSqG cicke MT2_RAT : 21- 47: agsck Ckq-CkCtSCkkscCscCpvGCakcSqG cicke MT2_SCYSE : 16- 43: ckege CktgCkCtSCrcppCeqCssGCkcaNkE dcrkt MT2_STECO : 21- 47: pgsck Cke-CkCtSCkkscCscCpvGCakcAqG cickg MT3_BOVIN : 22- 48: sdpck Ceg-CtCaSCkkscCscCpaECekcAkD cvckg MT3_HORSE : 22- 48: sgeck Ceg-CkCtSCkkscCscCpaECekcAkD cvckg MT3_HUMAN : 22- 48: adsck Ceg-CkCtSCkkscCscCpaECekcAkD cvckg MT3_MOUSE : 22- 48: sdkck Ckg-CkCtNCkkscCscCpaGCekcAkD cvckg MT3_RAT : 22- 48: sdkck Ckg-CkCtNCkkscCscCpaGCekcAkD cvckg MTA_COLVI : 8- 34: agsck Ckn-CrCrSCrkscCscCpaGCnncAkG cvcke MTA_ONCMY : 20- 46: ggsck Csn-CaCtSCkkasCcdCcpSGcskCaS gcvck MTB_COLVI : 8- 34: agsck Ckn-CrCrSCrkscCscCpaGCnncVkG cvcke MTB_ONCMY : 20- 46: ggsck Csn-CaCtSCkkscCpcCpsDCskcAsG cvckg MT_CHICK : 22- 48: agsck Ckn-CrCrSCrkscCscCpaGCnncAkG cvcke MT_ESOLU : 20- 46: ggsck Csn-CaCtSCkkscCscCpsGCskcAsG cickg MT_NOEBA : 20- 46: gatck Ctn-CqCtTCkkscCscCpsGCskcAsG cvckg MT_PLEPL : 20- 46: ggsct Ckn-CsCtTCnkscCpcCpsGCpkcAsG cvckg MT_XENLA : 22- 48: gttcs Csn-CkCtSCkkscCscCpaECskcSqG chcek G 7: 35.2816 51( 51) C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C-x(2,3)-C-x-[ACPV]-x-[CDGNS]-x(3)-[ACS]-x(2)-[CGT] Occurences: 51(51) MT1A_BOVIN : 21- 47: agsct CkaCrCpSCkks-Ccs-CcPvGcakCaqG cvckg MT1A_BOVIN : 21- 48: agsct CkaCrCpSCkkscCsc-CpVgCakcAqgC vckga MT1A_BOVIN : 21- 48: agsct CkaCrCpSCkks-CcscCpVgCakcAqgC vckga MT1A_HORSE : 21- 47: agsck CkeCrCtSCkks-Ccs-CcPgGcarCaqG cvckg MT1A_HUMAN : 21- 47: tgsck CkeCkCnSCkks-Ccs-CcPmScakCaqG cickg MT1A_RABIT : 21- 47: assck CkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT1A_RABIT : 21- 48: assck CkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT1A_RABIT : 21- 48: assck CkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT1B_HORSE : 21- 47: agsck CkqCrCaSCkks-Ccs-CcPvGcakCaqG cvckg MT1B_HORSE : 21- 48: agsck CkqCrCaSCkkscCsc-CpVgCakcAqgC vckga MT1B_HORSE : 21- 48: agsck CkqCrCaSCkks-CcscCpVgCakcAqgC vckga MT1B_HUMAN : 21- 47: agsck CkeCkCtSCkkc-Ccs-CcPvGcakCaqG cvckg MT1B_HUMAN : 21- 48: agsck CkeCkCtSCkkccCsc-CpVgCakcAqgC vckgs MT1B_HUMAN : 21- 47: agsck CkeCkCtSCkk--CccsCcPvGcakCaqG cvckg MT1B_HUMAN : 21- 48: agsck CkeCkCtSCkkc-CcscCpVgCakcAqgC vckgs MT1B_SHEEP : 21- 47: agsct CkaCrCpSCkks-Ccs-CcPvGcakCaqG cvckg MT1B_SHEEP : 21- 48: agsct CkaCrCpSCkkscCsc-CpVgCakcAqgC vckga MT1B_SHEEP : 21- 48: agsct CkaCrCpSCkks-CcscCpVgCakcAqgC vckga MT1C_SHEEP : 21- 47: agsct CkaCrCpSCkks-Ccs-CcPvGcakCaqG cickg MT1C_SHEEP : 21- 48: agsct CkaCrCpSCkkscCsc-CpVgCakcAqgC ickga MT1C_SHEEP : 21- 48: agsct CkaCrCpSCkks-CcscCpVgCakcAqgC ickga MT1E_HUMAN : 21- 47: agsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cvckg MT1E_HUMAN : 21- 48: agsck CkeCkCtSCkkscCsc-CpVgCakcAqgC vckga MT1E_HUMAN : 21- 48: agsck CkeCkCtSCkks-CcscCpVgCakcAqgC vckga MT1F_HUMAN : 21- 47: agsck CkeCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1F_HUMAN : 21- 48: agsck CkeCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1F_HUMAN : 21- 48: agsck CkeCkCtSCkks-CcscCpVgCskcAqgC vckga MT1G_HUMAN : 21- 47: assck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1G_HUMAN : 21- 48: assck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT1G_HUMAN : 21- 48: assck CkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT1H_HUMAN : 21- 47: agsck CkkCkCtSCkks-Ccs-CcPlGcakCaqG cickg MT1I_HUMAN : 21- 47: agsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1I_HUMAN : 21- 48: agsck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT1I_HUMAN : 21- 48: agsck CkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT1K_HUMAN : 22- 48: assck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1K_HUMAN : 22- 49: assck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT1K_HUMAN : 22- 49: assck CkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT1L_HUMAN : 21- 47: agsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT1L_HUMAN : 21- 48: agsck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickgt MT1L_HUMAN : 21- 48: agsck CkeCkCtSCkks-CcscCpVgCakcAqgC ickgt MT1_CERAE : 21- 47: adsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cvckg MT1_CERAE : 21- 48: adsck CkeCkCtSCkkscCsc-CpVgCakcAqgC vckga MT1_CERAE : 21- 48: adsck CkeCkCtSCkks-CcscCpVgCakcAqgC vckga MT1_COLLI : 22- 48: gdnck CknCkCtSCkkg-Ccs-CcPaGcakCaqG cvckg MT1_COLLI : 22- 49: gdnck CknCkCtSCkkgcCsc-CpAgCakcAqgC vckgp MT1_COLLI : 22- 49: gdnck CknCkCtSCkkg-CcscCpAgCakcAqgC vckgp MT1_CRIGR : 21- 47: ssscg CkdCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1_CRIGR : 21- 48: ssscg CkdCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1_CRIGR : 21- 48: ssscg CkdCkCtSCkks-CcscCpVgCskcAqgC vckga MT1_HOMAM : 22- 48: ktgck CtsCrCaPCek--CtsgCkCpSkdeCakT cskpc MT1_MOUSE : 21- 47: tssca CknCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1_MOUSE : 21- 48: tssca CknCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1_MOUSE : 21- 48: tssca CknCkCtSCkks-CcscCpVgCskcAqgC vckga MT1_RAT : 21- 47: ssscg CknCkCtSCkks-Ccs-CcPvGcskCaqG cvckg MT1_RAT : 21- 48: ssscg CknCkCtSCkkscCsc-CpVgCskcAqgC vckga MT1_RAT : 21- 48: ssscg CknCkCtSCkks-CcscCpVgCskcAqgC vckga MT1_SCYSE : 22- 48: kegcq CtsCrCsPCek--CssgCkCaNkeeCskT cskac MT2A_RABIT : 22- 48: ansct CkaCkCtSCkks-Ccs-CcPpGcakCaqG cickg MT2A_RABIT : 22- 49: ansct CkaCkCtSCkkscCsc-CpPgCakcAqgC ickga MT2A_RABIT : 22- 49: ansct CkaCkCtSCkks-CcscCpPgCakcAqgC ickga MT2B_RABIT : 21- 47: assck CkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT2B_RABIT : 21- 48: assck CkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT2B_RABIT : 21- 48: assck CkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT2C_RABIT : 22- 48: ansct CkaCkCtSCkks-Ccs-CcPpGcakCaqG cickg MT2C_RABIT : 22- 49: ansct CkaCkCtSCkkscCsc-CpPgCakcAqgC ickga MT2C_RABIT : 22- 49: ansct CkaCkCtSCkks-CcscCpPgCakcAqgC ickga MT2D_RABIT : 21- 47: assck CkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT2D_RABIT : 21- 48: assck CkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT2D_RABIT : 21- 48: assck CkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT2E_RABIT : 21- 47: assck CkeCkCtSCkks-Ccs-CcPaGctkCaqG cickg MT2E_RABIT : 21- 48: assck CkeCkCtSCkkscCsc-CpAgCtkcAqgC ickga MT2E_RABIT : 21- 48: assck CkeCkCtSCkks-CcscCpAgCtkcAqgC ickga MT2_BOVIN : 21- 47: agsck CkdCkCaSCkks-Ccs-CcPvGcakCaqG cvckg MT2_BOVIN : 21- 48: agsck CkdCkCaSCkkscCsc-CpVgCakcAqgC vckga MT2_BOVIN : 21- 48: agsck CkdCkCaSCkks-CcscCpVgCakcAqgC vckga MT2_CERAE : 21- 47: agsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT2_CERAE : 21- 48: agsck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT2_CERAE : 21- 48: agsck CkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT2_COLLI : 22- 49: agsck CknCrCqSCrkscCsc-CrAsCsncAkgC vckep MT2_COLLI : 22- 49: agsck CknCrCqSCrks-CcscCrAsCsncAkgC vckep MT2_CRIGR : 21- 47: agsck CkeCkCtTCkks-Ccs-CcPvGcakCsqG cvcke MT2_CRIGR : 21- 48: agsck CkeCkCtTCkkscCsc-CpVgCakcSqgC vckea MT2_CRIGR : 21- 48: agsck CkeCkCtTCkks-CcscCpVgCakcSqgC vckea MT2_HUMAN : 21- 47: agsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT2_HUMAN : 21- 48: agsck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT2_HUMAN : 21- 48: agsck CkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT2_MESAU : 21- 47: sgsck CkeCkCtTCkks-Ccs-CcPvGcakCsqG cvcke MT2_MESAU : 21- 48: sgsck CkeCkCtTCkkscCsc-CpVgCakcSqgC vckea MT2_MESAU : 21- 48: sgsck CkeCkCtTCkks-CcscCpVgCakcSqgC vckea MT2_MOUSE : 21- 47: agack CkqCkCtSCkks-Ccs-CcPvGcakCsqG cicke MT2_MOUSE : 21- 48: agack CkqCkCtSCkkscCsc-CpVgCakcSqgC ickea MT2_MOUSE : 21- 48: agack CkqCkCtSCkks-CcscCpVgCakcSqgC ickea MT2_RAT : 21- 47: agsck CkqCkCtSCkks-Ccs-CcPvGcakCsqG cicke MT2_RAT : 21- 48: agsck CkqCkCtSCkkscCsc-CpVgCakcSqgC ickea MT2_RAT : 21- 48: agsck CkqCkCtSCkks-CcscCpVgCakcSqgC ickea MT2_SCYSE : 22- 48: ktgck CtsCrCpPCeq--CssgCkCaNkedCrkT cskpc MT2_STECO : 21- 47: pgsck CkeCkCtSCkks-Ccs-CcPvGcakCaqG cickg MT2_STECO : 21- 48: pgsck CkeCkCtSCkkscCsc-CpVgCakcAqgC ickga MT2_STECO : 21- 48: pgsck CkeCkCtSCkks-CcscCpVgCakcAqgC ickga MT3_BOVIN : 22- 49: sdpck CegCtCaSCkkscCsc-CpAeCekcAkdC vckgg MT3_BOVIN : 22- 49: sdpck CegCtCaSCkks-CcscCpAeCekcAkdC vckgg MT3_HORSE : 22- 49: sgeck CegCkCtSCkkscCsc-CpAeCekcAkdC vckgg MT3_HORSE : 22- 49: sgeck CegCkCtSCkks-CcscCpAeCekcAkdC vckgg MT3_HUMAN : 22- 49: adsck CegCkCtSCkkscCsc-CpAeCekcAkdC vckgg MT3_HUMAN : 22- 49: adsck CegCkCtSCkks-CcscCpAeCekcAkdC vckgg MT3_MOUSE : 22- 49: sdkck CkgCkCtNCkkscCsc-CpAgCekcAkdC vckge MT3_MOUSE : 22- 49: sdkck CkgCkCtNCkks-CcscCpAgCekcAkdC vckge MT3_RAT : 22- 49: sdkck CkgCkCtNCkkscCsc-CpAgCekcAkdC vckge MT3_RAT : 22- 49: sdkck CkgCkCtNCkks-CcscCpAgCekcAkdC vckge MTA_COLVI : 8- 34: agsck CknCrCrSCrks-Ccs-CcPaGcnnCakG cvcke MTA_COLVI : 8- 35: agsck CknCrCrSCrkscCsc-CpAgCnncAkgC vckep MTA_COLVI : 8- 35: agsck CknCrCrSCrks-CcscCpAgCnncAkgC vckep MTA_ONCMY : 20- 47: ggsck CsnCaCtSCkkasCcd-CcPsGcskCasG cvckg MTB_COLVI : 8- 34: agsck CknCrCrSCrks-Ccs-CcPaGcnnCvkG cvcke MTB_ONCMY : 20- 46: ggsck CsnCaCtSCkks-Ccp-CcPsDcskCasG cvckg MT_CHICK : 22- 48: agsck CknCrCrSCrks-Ccs-CcPaGcnnCakG cvcke MT_CHICK : 22- 49: agsck CknCrCrSCrkscCsc-CpAgCnncAkgC vckep MT_CHICK : 22- 49: agsck CknCrCrSCrks-CcscCpAgCnncAkgC vckep MT_ESOLU : 20- 46: ggsck CsnCaCtSCkks-Ccs-CcPsGcskCasG cickg MT_NOEBA : 20- 46: gatck CtnCqCtTCkks-Ccs-CcPsGcskCasG cvckg MT_PLEPL : 20- 46: ggsct CknCsCtTCnks-Ccp-CcPsGcpkCasG cvckg MT_XENLA : 22- 49: gttcs CsnCkCtSCkkscCsc-CpAeCskcSqgC hcekg MT_XENLA : 22- 49: gttcs CsnCkCtSCkks-CcscCpAeCskcSqgC hcekg H 8: 34.0117 88( 51) C-x(2)-[GS]-C-x(0,1)-C-x(1,2)-C-x-[CP]-x(2)-C-x(2)-[ACS]-[ACSTV]-x(2)-[CD] Occurences: 88(51) MT1A_BOVIN : 15- 36: ggscs CagSCtCkaCrCpsCkkSCcsC cpvgc MT1A_BOVIN : 29- 48: crcps CkkSC-Cs-CcPvgCakCAqgC vckga MT1A_HORSE : 15- 36: ggsct CagSCkCkeCrCtsCkkSCcsC cpggc MT1A_HORSE : 29- 48: crcts CkkSC-Cs-CcPggCarCAqgC vckga MT1A_HUMAN : 15- 36: ggsct CtgSCkCkeCkCnsCkkSCcsC cpmsc MT1A_HUMAN : 29- 48: ckcns CkkSC-Cs-CcPmsCakCAqgC ickga MT1A_RABIT : 15- 36: gnsct CasSCkCkeCkCtsCkkSCcsC cpagc MT1A_RABIT : 29- 48: ckcts CkkSC-Cs-CcPagCtkCAqgC ickga MT1B_HORSE : 15- 36: gesct CagSCkCkqCrCasCkkSCcsC cpvgc MT1B_HORSE : 29- 48: crcas CkkSC-Cs-CcPvgCakCAqgC vckga MT1B_HUMAN : 15- 36: ggsca CagSCkCkeCkCtsCkkCCcsC cpvgc MT1B_SHEEP : 15- 36: sgscs CagSCtCkaCrCpsCkkSCcsC cpvgc MT1B_SHEEP : 29- 48: crcps CkkSC-Cs-CcPvgCakCAqgC vckga MT1C_SHEEP : 15- 36: gsscs CagSCtCkaCrCpsCkkSCcsC cpvgc MT1C_SHEEP : 29- 48: crcps CkkSC-Cs-CcPvgCakCAqgC ickga MT1E_HUMAN : 15- 36: ggsct CagSCkCkeCkCtsCkkSCcsC cpvgc MT1E_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC vckga MT1F_HUMAN : 15- 36: gvsct CagSCkCkeCkCtsCkkSCcsC cpvgc MT1F_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPvgCskCAqgC vckga MT1G_HUMAN : 15- 36: gvsct CasSCkCkeCkCtsCkkSCcsC cpvgc MT1G_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC ickga MT1H_HUMAN : 15- 36: ggsca CagSCkCkkCkCtsCkkSCcsC cplgc MT1H_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPlgCakCAqgC ickga MT1I_HUMAN : 15- 36: gvsct CagSCkCkeCkCtsCkkSCcsC cpvgc MT1I_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC ickga MT1K_HUMAN : 16- 37: gvsct CasSCkCkeCkCtsCkkSCcsC cpvgc MT1K_HUMAN : 30- 49: ckcts CkkSC-Cs-CcPvgCakCAqgC ickga MT1L_HUMAN : 15- 36: vgsca CagSCkCkeCkCtsCkkSCcsC cpvgc MT1L_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC ickgt MT1_CERAE : 15- 36: gvsct CadSCkCkeCkCtsCkkSCcsC cpvgc MT1_CERAE : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC vckga MT1_COLLI : 30- 49: ckcts CkkGC-Cs-CcPagCakCAqgC vckgp MT1_CRIGR : 15- 36: gstct CssSCgCkdCkCtsCkkSCcsC cpvgc MT1_CRIGR : 29- 48: ckcts CkkSC-Cs-CcPvgCskCAqgC vckga MT1_HOMAM : 16- 37: caegg CktGCkCtsCrCapCekCTsgC kcpsk MT1_MOUSE : 15- 36: ggsct CtsSCaCknCkCtsCkkSCcsC cpvgc MT1_MOUSE : 29- 48: ckcts CkkSC-Cs-CcPvgCskCAqgC vckga MT1_RAT : 15- 36: ggsct CssSCgCknCkCtsCkkSCcsC cpvgc MT1_RAT : 29- 48: ckcts CkkSC-Cs-CcPvgCskCAqgC vckga MT1_SCYSE : 16- 37: ckegg CkeGCqCtsCrCspCekCSsgC kcank MT2A_RABIT : 16- 37: gdsct CanSCtCkaCkCtsCkkSCcsC cppgc MT2A_RABIT : 30- 49: ckcts CkkSC-Cs-CcPpgCakCAqgC ickga MT2B_RABIT : 15- 36: gdsct CasSCkCkeCkCtsCkkSCcsC cpagc MT2B_RABIT : 29- 48: ckcts CkkSC-Cs-CcPagCtkCAqgC ickga MT2C_RABIT : 16- 37: gdsct CanSCtCkaCkCtsCkkSCcsC cppgc MT2C_RABIT : 30- 49: ckcts CkkSC-Cs-CcPpgCakCAqgC ickga MT2D_RABIT : 15- 36: rdsca CasSCkCkeCkCtsCkkSCcsC cpagc MT2D_RABIT : 29- 48: ckcts CkkSC-Cs-CcPagCtkCAqgC ickga MT2E_RABIT : 15- 36: rdsca CasSCkCkeCkCtsCkkSCcsC cpagc MT2E_RABIT : 29- 48: ckcts CkkSC-Cs-CcPagCtkCAqgC ickga MT2_BOVIN : 15- 36: gesct CagSCkCkdCkCasCkkSCcsC cpvgc MT2_BOVIN : 29- 48: ckcas CkkSC-Cs-CcPvgCakCAqgC vckga MT2_CERAE : 15- 36: gdsct CagSCkCkeCkCtsCkkSCcsC cpvgc MT2_CERAE : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC ickga MT2_COLLI : 16- 37: gdscs CagSCkCknCrCqsCrkSCcsC crasc MT2_CRIGR : 15- 36: dgscs CagSCkCkeCkCttCkkSCcsC cpvgc MT2_CRIGR : 29- 48: ckctt CkkSC-Cs-CcPvgCakCSqgC vckea MT2_HUMAN : 15- 36: gdsct CagSCkCkeCkCtsCkkSCcsC cpvgc MT2_HUMAN : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC ickga MT2_MESAU : 15- 36: dgscs CsgSCkCkeCkCttCkkSCcsC cpvgc MT2_MESAU : 29- 48: ckctt CkkSC-Cs-CcPvgCakCSqgC vckea MT2_MOUSE : 29- 48: ckcts CkkSC-Cs-CcPvgCakCSqgC ickea MT2_RAT : 15- 36: dgscs CagSCkCkqCkCtsCkkSCcsC cpvgc MT2_RAT : 29- 48: ckcts CkkSC-Cs-CcPvgCakCSqgC ickea MT2_SCYSE : 16- 37: ckege CktGCkCtsCrCppCeqCSsgC kcank MT2_STECO : 15- 36: ggsca CpgSCkCkeCkCtsCkkSCcsC cpvgc MT2_STECO : 29- 48: ckcts CkkSC-Cs-CcPvgCakCAqgC ickga MT3_BOVIN : 30- 49: ctcas CkkSC-Cs-CcPaeCekCAkdC vckgg MT3_HORSE : 30- 49: ckcts CkkSC-Cs-CcPaeCekCAkdC vckgg MT3_HUMAN : 16- 37: ggsct CadSCkCegCkCtsCkkSCcsC cpaec MT3_HUMAN : 30- 49: ckcts CkkSC-Cs-CcPaeCekCAkdC vckgg MT3_MOUSE : 30- 49: ckctn CkkSC-Cs-CcPagCekCAkdC vckge MT3_RAT : 30- 49: ckctn CkkSC-Cs-CcPagCekCAkdC vckge MTA_COLVI : 2- 23: s CagSCkCknCrCrsCrkSCcsC cpagc MTA_COLVI : 16- 35: crcrs CrkSC-Cs-CcPagCnnCAkgC vckep MTA_ONCMY : 14- 35: tgscn CggSCkCsnCaCtsCkkASccD ccpsg MTB_COLVI : 2- 23: s CagSCkCknCrCrsCrkSCcsC cpagc MTB_COLVI : 16- 35: crcrs CrkSC-Cs-CcPagCnnCVkgC vckep MTB_ONCMY : 14- 35: tgscn CggSCkCsnCaCtsCkkSCcpC cpsdc MTB_ONCMY : 28- 47: cacts CkkSC-Cp-CcPsdCskCAsgC vckgk MT_CHICK : 16- 37: gdscs CagSCkCknCrCrsCrkSCcsC cpagc MT_CHICK : 30- 49: crcrs CrkSC-Cs-CcPagCnnCAkgC vckep MT_ESOLU : 14- 35: tgscn CggSCkCsnCaCtsCkkSCcsC cpsgc MT_ESOLU : 28- 47: cacts CkkSC-Cs-CcPsgCskCAsgC ickgk MT_NOEBA : 28- 47: cqctt CkkSC-Cs-CcPsgCskCAsgC vckgn MT_PLEPL : 14- 35: tgtcn CggSCtCknCsCttCnkSCcpC cpsgc MT_PLEPL : 28- 47: csctt CnkSC-Cp-CcPsgCpkCAsgC vckgk MT_XENLA : 30- 49: ckcts CkkSC-Cs-CcPaeCskCSqgC hcekg I 9: 33.1163 52( 51) C-x-C-x(0,2)-C-x(3,4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C Occurences: 52(51) MT1A_BOVIN : 34- 50: ckksc CsC--Cpvg-CakCAqGCvC kgasd MT1A_HORSE : 34- 50: ckksc CsC--Cpgg-CarCAqGCvC kgasd MT1A_HUMAN : 34- 50: ckksc CsC--Cpms-CakCAqGCiC kgase MT1A_RABIT : 34- 50: ckksc CsC--Cpag-CtkCAqGCiC kgasd MT1B_HORSE : 34- 50: ckksc CsC--Cpvg-CakCAqGCvC kgasd MT1B_HUMAN : 32- 50: tsckk CcCscCpvg-CakCAqGCvC kgsse MT1B_HUMAN : 32- 50: tsckk CcCs-CcpvgCakCAqGCvC kgsse MT1B_HUMAN : 34- 50: ckkcc CsC--Cpvg-CakCAqGCvC kgsse MT1B_SHEEP : 34- 50: ckksc CsC--Cpvg-CakCAqGCvC kgasd MT1C_SHEEP : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgasd MT1E_HUMAN : 34- 50: ckksc CsC--Cpvg-CakCAqGCvC kgase MT1F_HUMAN : 34- 50: ckksc CsC--Cpvg-CskCAqGCvC kgase MT1G_HUMAN : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgase MT1H_HUMAN : 34- 50: ckksc CsC--Cplg-CakCAqGCiC kgase MT1I_HUMAN : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgase MT1K_HUMAN : 35- 51: ckksc CsC--Cpvg-CakCAqGCiC kgase MT1L_HUMAN : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgtsd MT1_CERAE : 34- 50: ckksc CsC--Cpvg-CakCAqGCvC kgase MT1_COLLI : 35- 51: ckkgc CsC--Cpag-CakCAqGCvC kgpps MT1_CRIGR : 34- 50: ckksc CsC--Cpvg-CskCAqGCvC kgasd MT1_HOMAM : 20- 39: gcktg CkCtsCrcapCekCTsGCkC pskde MT1_MOUSE : 34- 50: ckksc CsC--Cpvg-CskCAqGCvC kgaad MT1_RAT : 34- 50: ckksc CsC--Cpvg-CskCAqGCvC kgasd MT1_SCYSE : 20- 39: gckeg CqCtsCrcspCekCSsGCkC ankee MT2A_RABIT : 35- 51: ckksc CsC--Cppg-CakCAqGCiC kgasd MT2B_RABIT : 34- 50: ckksc CsC--Cpag-CtkCAqGCiC kgasd MT2C_RABIT : 35- 51: ckksc CsC--Cppg-CakCAqGCiC kgasd MT2D_RABIT : 34- 50: ckksc CsC--Cpag-CtkCAqGCiC kgasd MT2E_RABIT : 34- 50: ckksc CsC--Cpag-CtkCAqGCiC kgald MT2_BOVIN : 34- 50: ckksc CsC--Cpvg-CakCAqGCvC kgasd MT2_CERAE : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgasd MT2_COLLI : 35- 51: crksc CsC--Cras-CsnCAkGCvC kepss MT2_CRIGR : 34- 50: ckksc CsC--Cpvg-CakCSqGCvC keasd MT2_HUMAN : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgasd MT2_MESAU : 34- 50: ckksc CsC--Cpvg-CakCSqGCvC kease MT2_MOUSE : 34- 50: ckksc CsC--Cpvg-CakCSqGCiC keasd MT2_RAT : 34- 50: ckksc CsC--Cpvg-CakCSqGCiC keasd MT2_SCYSE : 20- 39: ecktg CkCtsCrcppCeqCSsGCkC anked MT2_STECO : 34- 50: ckksc CsC--Cpvg-CakCAqGCiC kgasd MT3_BOVIN : 35- 51: ckksc CsC--Cpae-CekCAkDCvC kggeg MT3_HORSE : 35- 51: ckksc CsC--Cpae-CekCAkDCvC kggeg MT3_HUMAN : 35- 51: ckksc CsC--Cpae-CekCAkDCvC kggea MT3_MOUSE : 35- 51: ckksc CsC--Cpag-CekCAkDCvC kgeeg MT3_RAT : 35- 51: ckksc CsC--Cpag-CekCAkDCvC kgeeg MTA_COLVI : 21- 37: crksc CsC--Cpag-CnnCAkGCvC kepas MTA_ONCMY : 34- 50: kkasc CdC--Cpsg-CskCAsGCvC kgktc MTB_COLVI : 21- 37: crksc CsC--Cpag-CnnCVkGCvC kepas MTB_ONCMY : 33- 49: ckksc CpC--Cpsd-CskCAsGCvC kgktc MT_CHICK : 35- 51: crksc CsC--Cpag-CnnCAkGCvC kepas MT_ESOLU : 33- 49: ckksc CsC--Cpsg-CskCAsGCiC kgktc MT_NOEBA : 33- 49: ckksc CsC--Cpsg-CskCAsGCvC kgnsc MT_PLEPL : 33- 49: cnksc CpC--Cpsg-CpkCAsGCvC kgktc MT_XENLA : 35- 51: ckksc CsC--Cpae-CskCSqGChC ekgsk J 10: 31.6664 51( 51) C-x(4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C-x(0,2)-K-[DEGT] Occurences: 51(51) MT1A_BOVIN : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT1A_HORSE : 36- 52: ksccs CcpggCarCAqGCvC--KG asdkc MT1A_HUMAN : 36- 52: ksccs CcpmsCakCAqGCiC--KG asekc MT1A_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG asdkc MT1B_HORSE : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT1B_HUMAN : 36- 52: kcccs CcpvgCakCAqGCvC--KG ssekc MT1B_SHEEP : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT1C_SHEEP : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT1E_HUMAN : 36- 52: ksccs CcpvgCakCAqGCvC--KG asekc MT1F_HUMAN : 36- 52: ksccs CcpvgCskCAqGCvC--KG asekc MT1G_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG asekc MT1H_HUMAN : 36- 52: ksccs CcplgCakCAqGCiC--KG asekc MT1I_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG asekc MT1K_HUMAN : 37- 53: ksccs CcpvgCakCAqGCiC--KG asekc MT1L_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG tsdkc MT1_CERAE : 36- 52: ksccs CcpvgCakCAqGCvC--KG asekc MT1_COLLI : 37- 53: kgccs CcpagCakCAqGCvC--KG ppsak MT1_CRIGR : 36- 52: ksccs CcpvgCskCAqGCvC--KG asdkc MT1_HOMAM : 25- 43: ckcts CrcapCekCTsGCkCpsKD ecakt MT1_MOUSE : 36- 52: ksccs CcpvgCskCAqGCvC--KG aadkc MT1_RAT : 36- 52: ksccs CcpvgCskCAqGCvC--KG asdkc MT1_SCYSE : 25- 43: cqcts CrcspCekCSsGCkCanKE ecskt MT2A_RABIT : 37- 53: ksccs CcppgCakCAqGCiC--KG asdkc MT2B_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG asdkc MT2C_RABIT : 37- 53: ksccs CcppgCakCAqGCiC--KG asdkc MT2D_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG asdkc MT2E_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG aldkc MT2_BOVIN : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT2_CERAE : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT2_COLLI : 37- 53: ksccs CcrasCsnCAkGCvC--KE psssk MT2_CRIGR : 36- 52: ksccs CcpvgCakCSqGCvC--KE asdkc MT2_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT2_MESAU : 36- 52: ksccs CcpvgCakCSqGCvC--KE asekc MT2_MOUSE : 36- 52: ksccs CcpvgCakCSqGCiC--KE asdkc MT2_RAT : 36- 52: ksccs CcpvgCakCSqGCiC--KE asdkc MT2_SCYSE : 25- 43: ckcts CrcppCeqCSsGCkCanKE dcrkt MT2_STECO : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT3_BOVIN : 37- 53: ksccs CcpaeCekCAkDCvC--KG gegae MT3_HORSE : 37- 53: ksccs CcpaeCekCAkDCvC--KG gegae MT3_HUMAN : 37- 53: ksccs CcpaeCekCAkDCvC--KG geaae MT3_MOUSE : 37- 53: ksccs CcpagCekCAkDCvC--KG eegak MT3_RAT : 37- 53: ksccs CcpagCekCAkDCvC--KG eegak MTA_COLVI : 23- 39: ksccs CcpagCnnCAkGCvC--KE pass MTA_ONCMY : 36- 52: asccd CcpsgCskCAsGCvC--KG ktcdt MTA_ONCMY : 36- 54: asccd CcpsgCskCAsGCvCkgKT cdtsc MTB_COLVI : 23- 39: ksccs CcpagCnnCVkGCvC--KE pass MTB_ONCMY : 35- 51: ksccp CcpsdCskCAsGCvC--KG ktcdt MTB_ONCMY : 35- 53: ksccp CcpsdCskCAsGCvCkgKT cdtsc MT_CHICK : 37- 53: ksccs CcpagCnnCAkGCvC--KE passk MT_ESOLU : 35- 51: ksccs CcpsgCskCAsGCiC--KG ktcdt MT_ESOLU : 35- 53: ksccs CcpsgCskCAsGCiCkgKT cdtsc MT_NOEBA : 35- 51: ksccs CcpsgCskCAsGCvC--KG nscds MT_PLEPL : 35- 51: ksccp CcpsgCpkCAsGCvC--KG ktcdt MT_PLEPL : 35- 53: ksccp CcpsgCpkCAsGCvCkgKT cdtsc MT_XENLA : 37- 54: ksccs CcpaeCskCSqGChCe-KG skkcs K 11: 31.1664 99( 51) C-x(3,4)-C-x(2)-C-[ASTV]-x-[DG]-C-x-C-x(0,2)-K-[DEGT] Occurences: 99(51) MT1A_BOVIN : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT1A_BOVIN : 37- 52: sccsc Cpvg-CakCAqGCvC--KG asdkc MT1A_HORSE : 36- 52: ksccs CcpggCarCAqGCvC--KG asdkc MT1A_HORSE : 37- 52: sccsc Cpgg-CarCAqGCvC--KG asdkc MT1A_HUMAN : 36- 52: ksccs CcpmsCakCAqGCiC--KG asekc MT1A_HUMAN : 37- 52: sccsc Cpms-CakCAqGCiC--KG asekc MT1A_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG asdkc MT1A_RABIT : 37- 52: sccsc Cpag-CtkCAqGCiC--KG asdkc MT1B_HORSE : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT1B_HORSE : 37- 52: sccsc Cpvg-CakCAqGCvC--KG asdkc MT1B_HUMAN : 36- 52: kcccs CcpvgCakCAqGCvC--KG ssekc MT1B_HUMAN : 37- 52: cccsc Cpvg-CakCAqGCvC--KG ssekc MT1B_SHEEP : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT1B_SHEEP : 37- 52: sccsc Cpvg-CakCAqGCvC--KG asdkc MT1C_SHEEP : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT1C_SHEEP : 37- 52: sccsc Cpvg-CakCAqGCiC--KG asdkc MT1E_HUMAN : 36- 52: ksccs CcpvgCakCAqGCvC--KG asekc MT1E_HUMAN : 37- 52: sccsc Cpvg-CakCAqGCvC--KG asekc MT1F_HUMAN : 36- 52: ksccs CcpvgCskCAqGCvC--KG asekc MT1F_HUMAN : 37- 52: sccsc Cpvg-CskCAqGCvC--KG asekc MT1G_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG asekc MT1G_HUMAN : 37- 52: sccsc Cpvg-CakCAqGCiC--KG asekc MT1H_HUMAN : 36- 52: ksccs CcplgCakCAqGCiC--KG asekc MT1H_HUMAN : 37- 52: sccsc Cplg-CakCAqGCiC--KG asekc MT1I_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG asekc MT1I_HUMAN : 37- 52: sccsc Cpvg-CakCAqGCiC--KG asekc MT1K_HUMAN : 37- 53: ksccs CcpvgCakCAqGCiC--KG asekc MT1K_HUMAN : 38- 53: sccsc Cpvg-CakCAqGCiC--KG asekc MT1L_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG tsdkc MT1L_HUMAN : 37- 52: sccsc Cpvg-CakCAqGCiC--KG tsdkc MT1_CERAE : 36- 52: ksccs CcpvgCakCAqGCvC--KG asekc MT1_CERAE : 37- 52: sccsc Cpvg-CakCAqGCvC--KG asekc MT1_COLLI : 37- 53: kgccs CcpagCakCAqGCvC--KG ppsak MT1_COLLI : 38- 53: gccsc Cpag-CakCAqGCvC--KG ppsak MT1_CRIGR : 36- 52: ksccs CcpvgCskCAqGCvC--KG asdkc MT1_CRIGR : 37- 52: sccsc Cpvg-CskCAqGCvC--KG asdkc MT1_HOMAM : 25- 43: ckcts CrcapCekCTsGCkCpsKD ecakt MT1_MOUSE : 36- 52: ksccs CcpvgCskCAqGCvC--KG aadkc MT1_MOUSE : 37- 52: sccsc Cpvg-CskCAqGCvC--KG aadkc MT1_RAT : 36- 52: ksccs CcpvgCskCAqGCvC--KG asdkc MT1_RAT : 37- 52: sccsc Cpvg-CskCAqGCvC--KG asdkc MT1_SCYSE : 25- 43: cqcts CrcspCekCSsGCkCanKE ecskt MT2A_RABIT : 37- 53: ksccs CcppgCakCAqGCiC--KG asdkc MT2A_RABIT : 38- 53: sccsc Cppg-CakCAqGCiC--KG asdkc MT2B_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG asdkc MT2B_RABIT : 37- 52: sccsc Cpag-CtkCAqGCiC--KG asdkc MT2C_RABIT : 37- 53: ksccs CcppgCakCAqGCiC--KG asdkc MT2C_RABIT : 38- 53: sccsc Cppg-CakCAqGCiC--KG asdkc MT2D_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG asdkc MT2D_RABIT : 37- 52: sccsc Cpag-CtkCAqGCiC--KG asdkc MT2E_RABIT : 36- 52: ksccs CcpagCtkCAqGCiC--KG aldkc MT2E_RABIT : 37- 52: sccsc Cpag-CtkCAqGCiC--KG aldkc MT2_BOVIN : 36- 52: ksccs CcpvgCakCAqGCvC--KG asdkc MT2_BOVIN : 37- 52: sccsc Cpvg-CakCAqGCvC--KG asdkc MT2_CERAE : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT2_CERAE : 37- 52: sccsc Cpvg-CakCAqGCiC--KG asdkc MT2_COLLI : 37- 53: ksccs CcrasCsnCAkGCvC--KE psssk MT2_COLLI : 38- 53: sccsc Cras-CsnCAkGCvC--KE psssk MT2_CRIGR : 36- 52: ksccs CcpvgCakCSqGCvC--KE asdkc MT2_CRIGR : 37- 52: sccsc Cpvg-CakCSqGCvC--KE asdkc MT2_HUMAN : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT2_HUMAN : 37- 52: sccsc Cpvg-CakCAqGCiC--KG asdkc MT2_MESAU : 36- 52: ksccs CcpvgCakCSqGCvC--KE asekc MT2_MESAU : 37- 52: sccsc Cpvg-CakCSqGCvC--KE asekc MT2_MOUSE : 36- 52: ksccs CcpvgCakCSqGCiC--KE asdkc MT2_MOUSE : 37- 52: sccsc Cpvg-CakCSqGCiC--KE asdkc MT2_RAT : 36- 52: ksccs CcpvgCakCSqGCiC--KE asdkc MT2_RAT : 37- 52: sccsc Cpvg-CakCSqGCiC--KE asdkc MT2_SCYSE : 25- 43: ckcts CrcppCeqCSsGCkCanKE dcrkt MT2_STECO : 36- 52: ksccs CcpvgCakCAqGCiC--KG asdkc MT2_STECO : 37- 52: sccsc Cpvg-CakCAqGCiC--KG asdkc MT3_BOVIN : 37- 53: ksccs CcpaeCekCAkDCvC--KG gegae MT3_BOVIN : 38- 53: sccsc Cpae-CekCAkDCvC--KG gegae MT3_HORSE : 37- 53: ksccs CcpaeCekCAkDCvC--KG gegae MT3_HORSE : 38- 53: sccsc Cpae-CekCAkDCvC--KG gegae MT3_HUMAN : 37- 53: ksccs CcpaeCekCAkDCvC--KG geaae MT3_HUMAN : 38- 53: sccsc Cpae-CekCAkDCvC--KG geaae MT3_MOUSE : 37- 53: ksccs CcpagCekCAkDCvC--KG eegak MT3_MOUSE : 38- 53: sccsc Cpag-CekCAkDCvC--KG eegak MT3_RAT : 37- 53: ksccs CcpagCekCAkDCvC--KG eegak MT3_RAT : 38- 53: sccsc Cpag-CekCAkDCvC--KG eegak MTA_COLVI : 23- 39: ksccs CcpagCnnCAkGCvC--KE pass MTA_COLVI : 24- 39: sccsc Cpag-CnnCAkGCvC--KE pass MTA_ONCMY : 36- 52: asccd CcpsgCskCAsGCvC--KG ktcdt MTA_ONCMY : 36- 54: asccd CcpsgCskCAsGCvCkgKT cdtsc MTA_ONCMY : 37- 52: sccdc Cpsg-CskCAsGCvC--KG ktcdt MTA_ONCMY : 37- 54: sccdc Cpsg-CskCAsGCvCkgKT cdtsc MTB_COLVI : 23- 39: ksccs CcpagCnnCVkGCvC--KE pass MTB_COLVI : 24- 39: sccsc Cpag-CnnCVkGCvC--KE pass MTB_ONCMY : 35- 51: ksccp CcpsdCskCAsGCvC--KG ktcdt MTB_ONCMY : 35- 53: ksccp CcpsdCskCAsGCvCkgKT cdtsc MTB_ONCMY : 36- 51: sccpc Cpsd-CskCAsGCvC--KG ktcdt MTB_ONCMY : 36- 53: sccpc Cpsd-CskCAsGCvCkgKT cdtsc MT_CHICK : 37- 53: ksccs CcpagCnnCAkGCvC--KE passk MT_CHICK : 38- 53: sccsc Cpag-CnnCAkGCvC--KE passk MT_ESOLU : 35- 51: ksccs CcpsgCskCAsGCiC--KG ktcdt MT_ESOLU : 35- 53: ksccs CcpsgCskCAsGCiCkgKT cdtsc MT_ESOLU : 36- 51: sccsc Cpsg-CskCAsGCiC--KG ktcdt MT_ESOLU : 36- 53: sccsc Cpsg-CskCAsGCiCkgKT cdtsc MT_NOEBA : 35- 51: ksccs CcpsgCskCAsGCvC--KG nscds MT_NOEBA : 36- 51: sccsc Cpsg-CskCAsGCvC--KG nscds MT_PLEPL : 35- 51: ksccp CcpsgCpkCAsGCvC--KG ktcdt MT_PLEPL : 35- 53: ksccp CcpsgCpkCAsGCvCkgKT cdtsc MT_PLEPL : 36- 51: sccpc Cpsg-CpkCAsGCvC--KG ktcdt MT_PLEPL : 36- 53: sccpc Cpsg-CpkCAsGCvCkgKT cdtsc MT_XENLA : 37- 54: ksccs CcpaeCskCSqGChCe-KG skkcs MT_XENLA : 38- 54: sccsc Cpae-CskCSqGChCe-KG skkcs L 12: 27.9975 86( 51) C-x(0,1)-C-x(0,2)-S-C-x-[CP]-x(2)-C-x(3)-[ASTV]-x(4)-[CS] Occurences: 86(51) MT1A_BOVIN : 13- 33: ptggs CsCagSCtCkaCrcpSckksC csccp MT1A_BOVIN : 33- 50: sckks C-C--SCcPvgCakcAqgcvC kgasd MT1A_HORSE : 13- 33: ptggs CtCagSCkCkeCrctSckksC csccp MT1A_HORSE : 33- 50: sckks C-C--SCcPggCarcAqgcvC kgasd MT1A_HUMAN : 13- 33: atggs CtCtgSCkCkeCkcnSckksC csccp MT1A_HUMAN : 33- 50: sckks C-C--SCcPmsCakcAqgciC kgase MT1A_RABIT : 13- 33: atgns CtCasSCkCkeCkctSckksC csccp MT1A_RABIT : 33- 50: sckks C-C--SCcPagCtkcAqgciC kgasd MT1B_HORSE : 13- 33: vages CtCagSCkCkqCrcaSckksC csccp MT1B_HORSE : 33- 50: sckks C-C--SCcPvgCakcAqgcvC kgasd MT1B_HUMAN : 13- 33: ttggs CaCagSCkCkeCkctSckkcC csccp MT1B_HUMAN : 32- 50: tsckk CcC--SCcPvgCakcAqgcvC kgsse MT1B_HUMAN : 32- 50: tsckk C-Cc-SCcPvgCakcAqgcvC kgsse MT1B_HUMAN : 33- 50: sckkc C-C--SCcPvgCakcAqgcvC kgsse MT1B_SHEEP : 13- 33: ptsgs CsCagSCtCkaCrcpSckksC csccp MT1B_SHEEP : 33- 50: sckks C-C--SCcPvgCakcAqgcvC kgasd MT1C_SHEEP : 13- 33: stgss CsCagSCtCkaCrcpSckksC csccp MT1C_SHEEP : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgasd MT1E_HUMAN : 13- 33: atggs CtCagSCkCkeCkctSckksC csccp MT1E_HUMAN : 33- 50: sckks C-C--SCcPvgCakcAqgcvC kgase MT1F_HUMAN : 13- 33: aagvs CtCagSCkCkeCkctSckksC csccp MT1F_HUMAN : 33- 50: sckks C-C--SCcPvgCskcAqgcvC kgase MT1G_HUMAN : 13- 33: aagvs CtCasSCkCkeCkctSckksC csccp MT1G_HUMAN : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgase MT1H_HUMAN : 13- 33: eaggs CaCagSCkCkkCkctSckksC csccp MT1H_HUMAN : 33- 50: sckks C-C--SCcPlgCakcAqgciC kgase MT1I_HUMAN : 13- 33: aagvs CtCagSCkCkeCkctSckksC csccp MT1I_HUMAN : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgase MT1K_HUMAN : 14- 34: aagvs CtCasSCkCkeCkctSckksC csccp MT1K_HUMAN : 34- 51: sckks C-C--SCcPvgCakcAqgciC kgase MT1L_HUMAN : 13- 33: spvgs CaCagSCkCkeCkctSckksC csccp MT1L_HUMAN : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgtsd MT1_CERAE : 13- 33: atgvs CtCadSCkCkeCkctSckksC csccp MT1_CERAE : 33- 50: sckks C-C--SCcPvgCakcAqgcvC kgase MT1_COLLI : 34- 51: sckkg C-C--SCcPagCakcAqgcvC kgpps MT1_CRIGR : 13- 33: stgst CtCssSCgCkdCkctSckksC csccp MT1_CRIGR : 33- 50: sckks C-C--SCcPvgCskcAqgcvC kgasd MT1_HOMAM : 20- 39: gcktg CkCt-SCrCapCekcTsgckC pskde MT1_MOUSE : 13- 33: stggs CtCtsSCaCknCkctSckksC csccp MT1_MOUSE : 33- 50: sckks C-C--SCcPvgCskcAqgcvC kgaad MT1_RAT : 13- 33: stggs CtCssSCgCknCkctSckksC csccp MT1_RAT : 33- 50: sckks C-C--SCcPvgCskcAqgcvC kgasd MT1_SCYSE : 20- 39: gckeg CqCt-SCrCspCekcSsgckC ankee MT2A_RABIT : 14- 34: aagds CtCanSCtCkaCkctSckksC csccp MT2A_RABIT : 34- 51: sckks C-C--SCcPpgCakcAqgciC kgasd MT2B_RABIT : 13- 33: atgds CtCasSCkCkeCkctSckksC csccp MT2B_RABIT : 33- 50: sckks C-C--SCcPagCtkcAqgciC kgasd MT2C_RABIT : 14- 34: tagds CtCanSCtCkaCkctSckksC csccp MT2C_RABIT : 34- 51: sckks C-C--SCcPpgCakcAqgciC kgasd MT2D_RABIT : 13- 33: atrds CaCasSCkCkeCkctSckksC csccp MT2D_RABIT : 33- 50: sckks C-C--SCcPagCtkcAqgciC kgasd MT2E_RABIT : 13- 33: atrds CaCasSCkCkeCkctSckksC csccp MT2E_RABIT : 33- 50: sckks C-C--SCcPagCtkcAqgciC kgald MT2_BOVIN : 13- 33: tages CtCagSCkCkdCkcaSckksC csccp MT2_BOVIN : 33- 50: sckks C-C--SCcPvgCakcAqgcvC kgasd MT2_CERAE : 13- 33: vagds CtCagSCkCkeCkctSckksC csccp MT2_CERAE : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgasd MT2_COLLI : 14- 34: aagds CsCagSCkCknCrcqScrksC csccr MT2_CRIGR : 13- 33: atdgs CsCagSCkCkeCkctTckksC csccp MT2_CRIGR : 33- 50: tckks C-C--SCcPvgCakcSqgcvC keasd MT2_HUMAN : 13- 33: aagds CtCagSCkCkeCkctSckksC csccp MT2_HUMAN : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgasd MT2_MESAU : 13- 33: atdgs CsCsgSCkCkeCkctTckksC csccp MT2_MESAU : 33- 50: tckks C-C--SCcPvgCakcSqgcvC kease MT2_MOUSE : 33- 50: sckks C-C--SCcPvgCakcSqgciC keasd MT2_RAT : 13- 33: atdgs CsCagSCkCkqCkctSckksC csccp MT2_RAT : 33- 50: sckks C-C--SCcPvgCakcSqgciC keasd MT2_SCYSE : 20- 39: ecktg CkCt-SCrCppCeqcSsgckC anked MT2_STECO : 13- 33: taggs CaCpgSCkCkeCkctSckksC csccp MT2_STECO : 33- 50: sckks C-C--SCcPvgCakcAqgciC kgasd MT3_BOVIN : 34- 51: sckks C-C--SCcPaeCekcAkdcvC kggeg MT3_HORSE : 34- 51: sckks C-C--SCcPaeCekcAkdcvC kggeg MT3_HUMAN : 14- 34: psggs CtCadSCkCegCkctSckksC csccp MT3_HUMAN : 34- 51: sckks C-C--SCcPaeCekcAkdcvC kggea MT3_MOUSE : 34- 51: nckks C-C--SCcPagCekcAkdcvC kgeeg MT3_RAT : 34- 51: nckks C-C--SCcPagCekcAkdcvC kgeeg MTA_COLVI : 20- 37: scrks C-C--SCcPagCnncAkgcvC kepas MTA_ONCMY : 12- 32: sktgs CnCggSCkCsnCactSckkaS ccdcc MTB_COLVI : 20- 37: scrks C-C--SCcPagCnncVkgcvC kepas MTB_ONCMY : 12- 32: sktgs CnCggSCkCsnCactSckksC cpccp MT_CHICK : 14- 34: aagds CsCagSCkCknCrcrScrksC csccp MT_CHICK : 34- 51: scrks C-C--SCcPagCnncAkgcvC kepas MT_ESOLU : 12- 32: sktgs CnCggSCkCsnCactSckksC csccp MT_ESOLU : 32- 49: sckks C-C--SCcPsgCskcAsgciC kgktc MT_NOEBA : 32- 49: tckks C-C--SCcPsgCskcAsgcvC kgnsc MT_PLEPL : 12- 32: sktgt CnCggSCtCknCsctTcnksC cpccp MT_XENLA : 34- 51: sckks C-C--SCcPaeCskcSqgchC ekgsk M 13: 27.4963 51( 51) C-x(2)-C-[ASTV]-x-[DG]-C-x-C-x(0,2)-K-[DEGT] Occurences: 51(51) MT1A_BOVIN : 41- 52: ccpvg CakCAqGCvC--KG asdkc MT1A_HORSE : 41- 52: ccpgg CarCAqGCvC--KG asdkc MT1A_HUMAN : 41- 52: ccpms CakCAqGCiC--KG asekc MT1A_RABIT : 41- 52: ccpag CtkCAqGCiC--KG asdkc MT1B_HORSE : 41- 52: ccpvg CakCAqGCvC--KG asdkc MT1B_HUMAN : 41- 52: ccpvg CakCAqGCvC--KG ssekc MT1B_SHEEP : 41- 52: ccpvg CakCAqGCvC--KG asdkc MT1C_SHEEP : 41- 52: ccpvg CakCAqGCiC--KG asdkc MT1E_HUMAN : 41- 52: ccpvg CakCAqGCvC--KG asekc MT1F_HUMAN : 41- 52: ccpvg CskCAqGCvC--KG asekc MT1G_HUMAN : 41- 52: ccpvg CakCAqGCiC--KG asekc MT1H_HUMAN : 41- 52: ccplg CakCAqGCiC--KG asekc MT1I_HUMAN : 41- 52: ccpvg CakCAqGCiC--KG asekc MT1K_HUMAN : 42- 53: ccpvg CakCAqGCiC--KG asekc MT1L_HUMAN : 41- 52: ccpvg CakCAqGCiC--KG tsdkc MT1_CERAE : 41- 52: ccpvg CakCAqGCvC--KG asekc MT1_COLLI : 42- 53: ccpag CakCAqGCvC--KG ppsak MT1_CRIGR : 41- 52: ccpvg CskCAqGCvC--KG asdkc MT1_HOMAM : 30- 43: crcap CekCTsGCkCpsKD ecakt MT1_MOUSE : 41- 52: ccpvg CskCAqGCvC--KG aadkc MT1_RAT : 41- 52: ccpvg CskCAqGCvC--KG asdkc MT1_SCYSE : 30- 43: crcsp CekCSsGCkCanKE ecskt MT2A_RABIT : 42- 53: ccppg CakCAqGCiC--KG asdkc MT2B_RABIT : 41- 52: ccpag CtkCAqGCiC--KG asdkc MT2C_RABIT : 42- 53: ccppg CakCAqGCiC--KG asdkc MT2D_RABIT : 41- 52: ccpag CtkCAqGCiC--KG asdkc MT2E_RABIT : 41- 52: ccpag CtkCAqGCiC--KG aldkc MT2_BOVIN : 41- 52: ccpvg CakCAqGCvC--KG asdkc MT2_CERAE : 41- 52: ccpvg CakCAqGCiC--KG asdkc MT2_COLLI : 42- 53: ccras CsnCAkGCvC--KE psssk MT2_CRIGR : 41- 52: ccpvg CakCSqGCvC--KE asdkc MT2_HUMAN : 41- 52: ccpvg CakCAqGCiC--KG asdkc MT2_MESAU : 41- 52: ccpvg CakCSqGCvC--KE asekc MT2_MOUSE : 41- 52: ccpvg CakCSqGCiC--KE asdkc MT2_RAT : 41- 52: ccpvg CakCSqGCiC--KE asdkc MT2_SCYSE : 30- 43: crcpp CeqCSsGCkCanKE dcrkt MT2_STECO : 41- 52: ccpvg CakCAqGCiC--KG asdkc MT3_BOVIN : 42- 53: ccpae CekCAkDCvC--KG gegae MT3_HORSE : 42- 53: ccpae CekCAkDCvC--KG gegae MT3_HUMAN : 42- 53: ccpae CekCAkDCvC--KG geaae MT3_MOUSE : 42- 53: ccpag CekCAkDCvC--KG eegak MT3_RAT : 42- 53: ccpag CekCAkDCvC--KG eegak MTA_COLVI : 28- 39: ccpag CnnCAkGCvC--KE pass MTA_ONCMY : 41- 52: ccpsg CskCAsGCvC--KG ktcdt MTA_ONCMY : 41- 54: ccpsg CskCAsGCvCkgKT cdtsc MTB_COLVI : 28- 39: ccpag CnnCVkGCvC--KE pass MTB_ONCMY : 40- 51: ccpsd CskCAsGCvC--KG ktcdt MTB_ONCMY : 40- 53: ccpsd CskCAsGCvCkgKT cdtsc MT_CHICK : 42- 53: ccpag CnnCAkGCvC--KE passk MT_ESOLU : 40- 51: ccpsg CskCAsGCiC--KG ktcdt MT_ESOLU : 40- 53: ccpsg CskCAsGCiCkgKT cdtsc MT_NOEBA : 40- 51: ccpsg CskCAsGCvC--KG nscds MT_PLEPL : 40- 51: ccpsg CpkCAsGCvC--KG ktcdt MT_PLEPL : 40- 53: ccpsg CpkCAsGCvCkgKT cdtsc MT_XENLA : 42- 54: ccpae CskCSqGChCe-KG skkcs N 14: 25.8047 51( 51) C-x(4,5)-C-x-K-x(1,2)-C-[CS]-x-[ACP]-C Occurences: 51(51) MT1A_BOVIN : 24- 37: ctcka Crcps-CkKs-CCsCC pvgca MT1A_HORSE : 24- 37: ckcke Crcts-CkKs-CCsCC pggca MT1A_HUMAN : 24- 37: ckcke Ckcns-CkKs-CCsCC pmsca MT1A_RABIT : 24- 37: ckcke Ckcts-CkKs-CCsCC pagct MT1B_HORSE : 24- 37: ckckq Crcas-CkKs-CCsCC pvgca MT1B_HUMAN : 24- 37: ckcke Ckcts-CkKc-CCsCC pvgca MT1B_SHEEP : 24- 37: ctcka Crcps-CkKs-CCsCC pvgca MT1C_SHEEP : 24- 37: ctcka Crcps-CkKs-CCsCC pvgca MT1E_HUMAN : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT1F_HUMAN : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgcs MT1G_HUMAN : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT1H_HUMAN : 24- 37: ckckk Ckcts-CkKs-CCsCC plgca MT1I_HUMAN : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT1K_HUMAN : 25- 38: ckcke Ckcts-CkKs-CCsCC pvgca MT1L_HUMAN : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT1_CERAE : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT1_COLLI : 25- 38: ckckn Ckcts-CkKg-CCsCC pagca MT1_CRIGR : 24- 37: cgckd Ckcts-CkKs-CCsCC pvgcs MT1_HOMAM : 39- 53: tsgck CpskdeCaKt-CSkPC xccxx MT1_MOUSE : 24- 37: cackn Ckcts-CkKs-CCsCC pvgcs MT1_RAT : 24- 37: cgckn Ckcts-CkKs-CCsCC pvgcs MT1_SCYSE : 39- 53: ssgck CankeeCsKt-CSkAC sccpt MT2A_RABIT : 25- 38: ctcka Ckcts-CkKs-CCsCC ppgca MT2B_RABIT : 24- 37: ckcke Ckcts-CkKs-CCsCC pagct MT2C_RABIT : 25- 38: ctcka Ckcts-CkKs-CCsCC ppgca MT2D_RABIT : 24- 37: ckcke Ckcts-CkKs-CCsCC pagct MT2E_RABIT : 24- 37: ckcke Ckcts-CkKs-CCsCC pagct MT2_BOVIN : 24- 37: ckckd Ckcas-CkKs-CCsCC pvgca MT2_CERAE : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT2_COLLI : 25- 38: ckckn Crcqs-CrKs-CCsCC rascs MT2_CRIGR : 24- 37: ckcke Ckctt-CkKs-CCsCC pvgca MT2_HUMAN : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT2_MESAU : 24- 37: ckcke Ckctt-CkKs-CCsCC pvgca MT2_MOUSE : 24- 37: ckckq Ckcts-CkKs-CCsCC pvgca MT2_RAT : 24- 37: ckckq Ckcts-CkKs-CCsCC pvgca MT2_SCYSE : 39- 53: ssgck CankedCrKt-CSkPC sccp MT2_STECO : 24- 37: ckcke Ckcts-CkKs-CCsCC pvgca MT3_BOVIN : 25- 38: ckceg Ctcas-CkKs-CCsCC paece MT3_HORSE : 25- 38: ckceg Ckcts-CkKs-CCsCC paece MT3_HUMAN : 25- 38: ckceg Ckcts-CkKs-CCsCC paece MT3_MOUSE : 25- 38: ckckg Ckctn-CkKs-CCsCC pagce MT3_RAT : 25- 38: ckckg Ckctn-CkKs-CCsCC pagce MTA_COLVI : 11- 24: ckckn Crcrs-CrKs-CCsCC pagcn MTA_ONCMY : 23- 37: ckcsn Cacts-CkKasCCdCC psgcs MTB_COLVI : 11- 24: ckckn Crcrs-CrKs-CCsCC pagcn MTB_ONCMY : 23- 36: ckcsn Cacts-CkKs-CCpCC psdcs MT_CHICK : 25- 38: ckckn Crcrs-CrKs-CCsCC pagcn MT_ESOLU : 23- 36: ckcsn Cacts-CkKs-CCsCC psgcs MT_NOEBA : 23- 36: ckctn Cqctt-CkKs-CCsCC psgcs MT_PLEPL : 23- 36: ctckn Csctt-CnKs-CCpCC psgcp MT_XENLA : 25- 38: cscsn Ckcts-CkKs-CCsCC paecs O 15: 24.7466 54( 51) C-x(4,5)-C-x(1,2)-K-[CGST]-C-[CDS]-x(2)-C Occurences: 54(51) MT1A_BOVIN : 24- 37: ctcka Crcps-Ck-KSCCscC pvgca MT1A_HORSE : 24- 37: ckcke Crcts-Ck-KSCCscC pggca MT1A_HUMAN : 24- 37: ckcke Ckcns-Ck-KSCCscC pmsca MT1A_RABIT : 24- 37: ckcke Ckcts-Ck-KSCCscC pagct MT1B_HORSE : 24- 37: ckckq Crcas-Ck-KSCCscC pvgca MT1B_HUMAN : 24- 37: ckcke Ckcts-Ck-KCCCscC pvgca MT1B_SHEEP : 24- 37: ctcka Crcps-Ck-KSCCscC pvgca MT1C_SHEEP : 24- 37: ctcka Crcps-Ck-KSCCscC pvgca MT1E_HUMAN : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT1F_HUMAN : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgcs MT1G_HUMAN : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT1H_HUMAN : 24- 37: ckckk Ckcts-Ck-KSCCscC plgca MT1I_HUMAN : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT1K_HUMAN : 25- 38: ckcke Ckcts-Ck-KSCCscC pvgca MT1L_HUMAN : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT1_CERAE : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT1_COLLI : 25- 38: ckckn Ckcts-Ck-KGCCscC pagca MT1_CRIGR : 24- 37: cgckd Ckcts-Ck-KSCCscC pvgcs MT1_HOMAM : 39- 53: tsgck CpskdeCa-KTCSkpC xccxx MT1_MOUSE : 24- 37: cackn Ckcts-Ck-KSCCscC pvgcs MT1_RAT : 24- 37: cgckn Ckcts-Ck-KSCCscC pvgcs MT1_SCYSE : 39- 53: ssgck CankeeCs-KTCSkaC sccpt MT2A_RABIT : 25- 38: ctcka Ckcts-Ck-KSCCscC ppgca MT2B_RABIT : 24- 37: ckcke Ckcts-Ck-KSCCscC pagct MT2C_RABIT : 25- 38: ctcka Ckcts-Ck-KSCCscC ppgca MT2D_RABIT : 24- 37: ckcke Ckcts-Ck-KSCCscC pagct MT2E_RABIT : 24- 37: ckcke Ckcts-Ck-KSCCscC pagct MT2_BOVIN : 24- 37: ckckd Ckcas-Ck-KSCCscC pvgca MT2_CERAE : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT2_COLLI : 25- 38: ckckn Crcqs-Cr-KSCCscC rascs MT2_CRIGR : 24- 37: ckcke Ckctt-Ck-KSCCscC pvgca MT2_HUMAN : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT2_MESAU : 24- 37: ckcke Ckctt-Ck-KSCCscC pvgca MT2_MOUSE : 24- 37: ckckq Ckcts-Ck-KSCCscC pvgca MT2_RAT : 24- 37: ckckq Ckcts-Ck-KSCCscC pvgca MT2_SCYSE : 39- 53: ssgck CankedCr-KTCSkpC sccp MT2_STECO : 24- 37: ckcke Ckcts-Ck-KSCCscC pvgca MT3_BOVIN : 25- 38: ckceg Ctcas-Ck-KSCCscC paece MT3_HORSE : 25- 38: ckceg Ckcts-Ck-KSCCscC paece MT3_HUMAN : 25- 38: ckceg Ckcts-Ck-KSCCscC paece MT3_MOUSE : 25- 38: ckckg Ckctn-Ck-KSCCscC pagce MT3_RAT : 25- 38: ckckg Ckctn-Ck-KSCCscC pagce MTA_COLVI : 11- 24: ckckn Crcrs-Cr-KSCCscC pagcn MTA_ONCMY : 44- 59: sgcsk CasgcvCkgKTCDtsC cq MTB_COLVI : 11- 24: ckckn Crcrs-Cr-KSCCscC pagcn MTB_ONCMY : 23- 36: ckcsn Cacts-Ck-KSCCpcC psdcs MTB_ONCMY : 43- 58: sdcsk CasgcvCkgKTCDtsC cq MT_CHICK : 25- 38: ckckn Crcrs-Cr-KSCCscC pagcn MT_ESOLU : 23- 36: ckcsn Cacts-Ck-KSCCscC psgcs MT_ESOLU : 43- 58: sgcsk CasgciCkgKTCDtsC cq MT_NOEBA : 23- 36: ckctn Cqctt-Ck-KSCCscC psgcs MT_PLEPL : 23- 36: ctckn Csctt-Cn-KSCCpcC psgcp MT_PLEPL : 43- 58: sgcpk CasgcvCkgKTCDtsC cq MT_XENLA : 25- 38: cscsn Ckcts-Ck-KSCCscC paecs P 16: 24.3555 77( 51) C-[AGPST]-x-[EGS]-C-x(0,1)-K-C-x(4,5)-C Occurences: 77(51) MT1A_BOVIN : 37- 50: sccsc CPvGCaKCaqgcvC kgasd MT1A_HORSE : 15- 26: ggsct CAgSC-KCkecr-C tsckk MT1A_HUMAN : 15- 26: ggsct CTgSC-KCkeck-C nsckk MT1A_HUMAN : 37- 50: sccsc CPmSCaKCaqgciC kgase MT1A_RABIT : 15- 26: gnsct CAsSC-KCkeck-C tsckk MT1A_RABIT : 37- 50: sccsc CPaGCtKCaqgciC kgasd MT1B_HORSE : 15- 26: gesct CAgSC-KCkqcr-C asckk MT1B_HORSE : 37- 50: sccsc CPvGCaKCaqgcvC kgasd MT1B_HUMAN : 15- 26: ggsca CAgSC-KCkeck-C tsckk MT1B_HUMAN : 37- 50: cccsc CPvGCaKCaqgcvC kgsse MT1B_SHEEP : 37- 50: sccsc CPvGCaKCaqgcvC kgasd MT1C_SHEEP : 37- 50: sccsc CPvGCaKCaqgciC kgasd MT1E_HUMAN : 15- 26: ggsct CAgSC-KCkeck-C tsckk MT1E_HUMAN : 37- 50: sccsc CPvGCaKCaqgcvC kgase MT1F_HUMAN : 15- 26: gvsct CAgSC-KCkeck-C tsckk MT1F_HUMAN : 37- 50: sccsc CPvGCsKCaqgcvC kgase MT1G_HUMAN : 15- 26: gvsct CAsSC-KCkeck-C tsckk MT1G_HUMAN : 37- 50: sccsc CPvGCaKCaqgciC kgase MT1H_HUMAN : 15- 26: ggsca CAgSC-KCkkck-C tsckk MT1H_HUMAN : 37- 50: sccsc CPlGCaKCaqgciC kgase MT1I_HUMAN : 15- 26: gvsct CAgSC-KCkeck-C tsckk MT1I_HUMAN : 37- 50: sccsc CPvGCaKCaqgciC kgase MT1K_HUMAN : 16- 27: gvsct CAsSC-KCkeck-C tsckk MT1K_HUMAN : 38- 51: sccsc CPvGCaKCaqgciC kgase MT1L_HUMAN : 15- 26: vgsca CAgSC-KCkeck-C tsckk MT1L_HUMAN : 37- 50: sccsc CPvGCaKCaqgciC kgtsd MT1_CERAE : 15- 26: gvsct CAdSC-KCkeck-C tsckk MT1_CERAE : 37- 50: sccsc CPvGCaKCaqgcvC kgase MT1_COLLI : 38- 51: gccsc CPaGCaKCaqgcvC kgpps MT1_CRIGR : 37- 50: sccsc CPvGCsKCaqgcvC kgasd MT1_HOMAM : 33- 45: apcek CTsGC-KCpskdeC aktcs MT1_MOUSE : 37- 50: sccsc CPvGCsKCaqgcvC kgaad MT1_RAT : 37- 50: sccsc CPvGCsKCaqgcvC kgasd MT1_SCYSE : 33- 45: spcek CSsGC-KCankeeC sktcs MT2A_RABIT : 38- 51: sccsc CPpGCaKCaqgciC kgasd MT2B_RABIT : 15- 26: gdsct CAsSC-KCkeck-C tsckk MT2B_RABIT : 37- 50: sccsc CPaGCtKCaqgciC kgasd MT2C_RABIT : 38- 51: sccsc CPpGCaKCaqgciC kgasd MT2D_RABIT : 15- 26: rdsca CAsSC-KCkeck-C tsckk MT2D_RABIT : 37- 50: sccsc CPaGCtKCaqgciC kgasd MT2E_RABIT : 15- 26: rdsca CAsSC-KCkeck-C tsckk MT2E_RABIT : 37- 50: sccsc CPaGCtKCaqgciC kgald MT2_BOVIN : 15- 26: gesct CAgSC-KCkdck-C asckk MT2_BOVIN : 37- 50: sccsc CPvGCaKCaqgcvC kgasd MT2_CERAE : 15- 26: gdsct CAgSC-KCkeck-C tsckk MT2_CERAE : 37- 50: sccsc CPvGCaKCaqgciC kgasd MT2_COLLI : 16- 27: gdscs CAgSC-KCkncr-C qscrk MT2_CRIGR : 15- 26: dgscs CAgSC-KCkeck-C ttckk MT2_CRIGR : 37- 50: sccsc CPvGCaKCsqgcvC keasd MT2_HUMAN : 15- 26: gdsct CAgSC-KCkeck-C tsckk MT2_HUMAN : 37- 50: sccsc CPvGCaKCaqgciC kgasd MT2_MESAU : 15- 26: dgscs CSgSC-KCkeck-C ttckk MT2_MESAU : 37- 50: sccsc CPvGCaKCsqgcvC kease MT2_MOUSE : 37- 50: sccsc CPvGCaKCsqgciC keasd MT2_RAT : 15- 26: dgscs CAgSC-KCkqck-C tsckk MT2_RAT : 37- 50: sccsc CPvGCaKCsqgciC keasd MT2_SCYSE : 33- 45: ppceq CSsGC-KCankedC rktcs MT2_STECO : 15- 26: ggsca CPgSC-KCkeck-C tsckk MT2_STECO : 37- 50: sccsc CPvGCaKCaqgciC kgasd MT3_BOVIN : 38- 51: sccsc CPaECeKCakdcvC kggeg MT3_HORSE : 16- 27: ggsct CSgEC-KCegck-C tsckk MT3_HORSE : 38- 51: sccsc CPaECeKCakdcvC kggeg MT3_HUMAN : 16- 27: ggsct CAdSC-KCegck-C tsckk MT3_HUMAN : 38- 51: sccsc CPaECeKCakdcvC kggea MT3_MOUSE : 38- 51: sccsc CPaGCeKCakdcvC kgeeg MT3_RAT : 38- 51: sccsc CPaGCeKCakdcvC kgeeg MTA_COLVI : 2- 13: s CAgSC-KCkncr-C rscrk MTA_ONCMY : 14- 25: tgscn CGgSC-KCsnca-C tsckk MTA_ONCMY : 37- 50: sccdc CPsGCsKCasgcvC kgktc MTB_COLVI : 2- 13: s CAgSC-KCkncr-C rscrk MTB_ONCMY : 14- 25: tgscn CGgSC-KCsnca-C tsckk MT_CHICK : 16- 27: gdscs CAgSC-KCkncr-C rscrk MT_ESOLU : 14- 25: tgscn CGgSC-KCsnca-C tsckk MT_ESOLU : 36- 49: sccsc CPsGCsKCasgciC kgktc MT_NOEBA : 36- 49: sccsc CPsGCsKCasgcvC kgnsc MT_PLEPL : 36- 49: sccpc CPsGCpKCasgcvC kgktc MT_XENLA : 38- 51: sccsc CPaECsKCsqgchC ekgsk Q 17: 22.4989 51( 51) C-x(2,3)-C-x-K-x(1,2)-C-x-[CDS]-C Occurences: 51(51) MT1A_BOVIN : 26- 36: ckacr Cps-CkKs-CcSC cpvgc MT1A_BOVIN : 26- 37: ckacr Cps-CkKscCsCC pvgca MT1A_HORSE : 26- 36: ckecr Cts-CkKs-CcSC cpggc MT1A_HORSE : 26- 37: ckecr Cts-CkKscCsCC pggca MT1A_HUMAN : 26- 36: ckeck Cns-CkKs-CcSC cpmsc MT1A_HUMAN : 26- 37: ckeck Cns-CkKscCsCC pmsca MT1A_RABIT : 26- 36: ckeck Cts-CkKs-CcSC cpagc MT1A_RABIT : 26- 37: ckeck Cts-CkKscCsCC pagct MT1B_HORSE : 26- 36: ckqcr Cas-CkKs-CcSC cpvgc MT1B_HORSE : 26- 37: ckqcr Cas-CkKscCsCC pvgca MT1B_HUMAN : 26- 36: ckeck Cts-CkKc-CcSC cpvgc MT1B_HUMAN : 26- 37: ckeck Cts-CkKccCsCC pvgca MT1B_SHEEP : 26- 36: ckacr Cps-CkKs-CcSC cpvgc MT1B_SHEEP : 26- 37: ckacr Cps-CkKscCsCC pvgca MT1C_SHEEP : 26- 36: ckacr Cps-CkKs-CcSC cpvgc MT1C_SHEEP : 26- 37: ckacr Cps-CkKscCsCC pvgca MT1E_HUMAN : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT1E_HUMAN : 26- 37: ckeck Cts-CkKscCsCC pvgca MT1F_HUMAN : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT1F_HUMAN : 26- 37: ckeck Cts-CkKscCsCC pvgcs MT1G_HUMAN : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT1G_HUMAN : 26- 37: ckeck Cts-CkKscCsCC pvgca MT1H_HUMAN : 26- 36: ckkck Cts-CkKs-CcSC cplgc MT1H_HUMAN : 26- 37: ckkck Cts-CkKscCsCC plgca MT1I_HUMAN : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT1I_HUMAN : 26- 37: ckeck Cts-CkKscCsCC pvgca MT1K_HUMAN : 27- 37: ckeck Cts-CkKs-CcSC cpvgc MT1K_HUMAN : 27- 38: ckeck Cts-CkKscCsCC pvgca MT1L_HUMAN : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT1L_HUMAN : 26- 37: ckeck Cts-CkKscCsCC pvgca MT1_CERAE : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT1_CERAE : 26- 37: ckeck Cts-CkKscCsCC pvgca MT1_COLLI : 27- 37: cknck Cts-CkKg-CcSC cpagc MT1_COLLI : 27- 38: cknck Cts-CkKgcCsCC pagca MT1_CRIGR : 26- 36: ckdck Cts-CkKs-CcSC cpvgc MT1_CRIGR : 26- 37: ckdck Cts-CkKscCsCC pvgcs MT1_HOMAM : 45- 56: pskde CaktCsKp-CxCC xx MT1_MOUSE : 26- 36: cknck Cts-CkKs-CcSC cpvgc MT1_MOUSE : 26- 37: cknck Cts-CkKscCsCC pvgcs MT1_RAT : 26- 36: cknck Cts-CkKs-CcSC cpvgc MT1_RAT : 26- 37: cknck Cts-CkKscCsCC pvgcs MT1_SCYSE : 45- 56: ankee CsktCsKa-CsCC pt MT2A_RABIT : 27- 37: ckack Cts-CkKs-CcSC cppgc MT2A_RABIT : 27- 38: ckack Cts-CkKscCsCC ppgca MT2B_RABIT : 26- 36: ckeck Cts-CkKs-CcSC cpagc MT2B_RABIT : 26- 37: ckeck Cts-CkKscCsCC pagct MT2C_RABIT : 27- 37: ckack Cts-CkKs-CcSC cppgc MT2C_RABIT : 27- 38: ckack Cts-CkKscCsCC ppgca MT2D_RABIT : 26- 36: ckeck Cts-CkKs-CcSC cpagc MT2D_RABIT : 26- 37: ckeck Cts-CkKscCsCC pagct MT2E_RABIT : 26- 36: ckeck Cts-CkKs-CcSC cpagc MT2E_RABIT : 26- 37: ckeck Cts-CkKscCsCC pagct MT2_BOVIN : 26- 36: ckdck Cas-CkKs-CcSC cpvgc MT2_BOVIN : 26- 37: ckdck Cas-CkKscCsCC pvgca MT2_CERAE : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT2_CERAE : 26- 37: ckeck Cts-CkKscCsCC pvgca MT2_COLLI : 27- 37: ckncr Cqs-CrKs-CcSC crasc MT2_COLLI : 27- 38: ckncr Cqs-CrKscCsCC rascs MT2_CRIGR : 26- 36: ckeck Ctt-CkKs-CcSC cpvgc MT2_CRIGR : 26- 37: ckeck Ctt-CkKscCsCC pvgca MT2_HUMAN : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT2_HUMAN : 26- 37: ckeck Cts-CkKscCsCC pvgca MT2_MESAU : 26- 36: ckeck Ctt-CkKs-CcSC cpvgc MT2_MESAU : 26- 37: ckeck Ctt-CkKscCsCC pvgca MT2_MOUSE : 26- 36: ckqck Cts-CkKs-CcSC cpvgc MT2_MOUSE : 26- 37: ckqck Cts-CkKscCsCC pvgca MT2_RAT : 26- 36: ckqck Cts-CkKs-CcSC cpvgc MT2_RAT : 26- 37: ckqck Cts-CkKscCsCC pvgca MT2_SCYSE : 45- 56: anked CrktCsKp-CsCC p MT2_STECO : 26- 36: ckeck Cts-CkKs-CcSC cpvgc MT2_STECO : 26- 37: ckeck Cts-CkKscCsCC pvgca MT3_BOVIN : 27- 37: cegct Cas-CkKs-CcSC cpaec MT3_BOVIN : 27- 38: cegct Cas-CkKscCsCC paece MT3_HORSE : 27- 37: cegck Cts-CkKs-CcSC cpaec MT3_HORSE : 27- 38: cegck Cts-CkKscCsCC paece MT3_HUMAN : 27- 37: cegck Cts-CkKs-CcSC cpaec MT3_HUMAN : 27- 38: cegck Cts-CkKscCsCC paece MT3_MOUSE : 27- 37: ckgck Ctn-CkKs-CcSC cpagc MT3_MOUSE : 27- 38: ckgck Ctn-CkKscCsCC pagce MT3_RAT : 27- 37: ckgck Ctn-CkKs-CcSC cpagc MT3_RAT : 27- 38: ckgck Ctn-CkKscCsCC pagce MTA_COLVI : 13- 23: ckncr Crs-CrKs-CcSC cpagc MTA_COLVI : 13- 24: ckncr Crs-CrKscCsCC pagcn MTA_ONCMY : 25- 36: csnca Cts-CkKasCcDC cpsgc MTB_COLVI : 13- 23: ckncr Crs-CrKs-CcSC cpagc MTB_COLVI : 13- 24: ckncr Crs-CrKscCsCC pagcn MTB_ONCMY : 25- 36: csnca Cts-CkKscCpCC psdcs MT_CHICK : 27- 37: ckncr Crs-CrKs-CcSC cpagc MT_CHICK : 27- 38: ckncr Crs-CrKscCsCC pagcn MT_ESOLU : 25- 35: csnca Cts-CkKs-CcSC cpsgc MT_ESOLU : 25- 36: csnca Cts-CkKscCsCC psgcs MT_NOEBA : 25- 35: ctncq Ctt-CkKs-CcSC cpsgc MT_NOEBA : 25- 36: ctncq Ctt-CkKscCsCC psgcs MT_PLEPL : 25- 36: ckncs Ctt-CnKscCpCC psgcp MT_XENLA : 27- 37: csnck Cts-CkKs-CcSC cpaec MT_XENLA : 27- 38: csnck Cts-CkKscCsCC paecs R 18: 22.0479 51( 51) C-x(2)-C-x-C-x-[NPST]-C-x(2,4)-C Occurences: 51(51) MT1A_BOVIN : 21- 33: agsct CkaCrCpSCkks-C csccp MT1A_HORSE : 21- 33: agsck CkeCrCtSCkks-C csccp MT1A_HUMAN : 21- 33: tgsck CkeCkCnSCkks-C csccp MT1A_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT1B_HORSE : 21- 33: agsck CkqCrCaSCkks-C csccp MT1B_HUMAN : 21- 32: agsck CkeCkCtSCkk--C ccscc MT1B_HUMAN : 21- 33: agsck CkeCkCtSCkkc-C csccp MT1B_SHEEP : 21- 33: agsct CkaCrCpSCkks-C csccp MT1C_SHEEP : 21- 33: agsct CkaCrCpSCkks-C csccp MT1E_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1F_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1G_HUMAN : 21- 33: assck CkeCkCtSCkks-C csccp MT1H_HUMAN : 21- 33: agsck CkkCkCtSCkks-C csccp MT1I_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1K_HUMAN : 22- 34: assck CkeCkCtSCkks-C csccp MT1L_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1_CERAE : 21- 33: adsck CkeCkCtSCkks-C csccp MT1_COLLI : 22- 34: gdnck CknCkCtSCkkg-C csccp MT1_CRIGR : 21- 33: ssscg CkdCkCtSCkks-C csccp MT1_HOMAM : 22- 33: ktgck CtsCrCaPCek--C tsgck MT1_MOUSE : 21- 33: tssca CknCkCtSCkks-C csccp MT1_RAT : 21- 33: ssscg CknCkCtSCkks-C csccp MT1_SCYSE : 22- 33: kegcq CtsCrCsPCek--C ssgck MT2A_RABIT : 22- 34: ansct CkaCkCtSCkks-C csccp MT2B_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT2C_RABIT : 22- 34: ansct CkaCkCtSCkks-C csccp MT2D_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT2E_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT2_BOVIN : 21- 33: agsck CkdCkCaSCkks-C csccp MT2_CERAE : 21- 33: agsck CkeCkCtSCkks-C csccp MT2_COLLI : 22- 34: agsck CknCrCqSCrks-C csccr MT2_CRIGR : 21- 33: agsck CkeCkCtTCkks-C csccp MT2_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT2_MESAU : 21- 33: sgsck CkeCkCtTCkks-C csccp MT2_MOUSE : 21- 33: agack CkqCkCtSCkks-C csccp MT2_RAT : 21- 33: agsck CkqCkCtSCkks-C csccp MT2_SCYSE : 22- 33: ktgck CtsCrCpPCeq--C ssgck MT2_STECO : 21- 33: pgsck CkeCkCtSCkks-C csccp MT3_BOVIN : 22- 34: sdpck CegCtCaSCkks-C csccp MT3_HORSE : 22- 34: sgeck CegCkCtSCkks-C csccp MT3_HUMAN : 22- 34: adsck CegCkCtSCkks-C csccp MT3_MOUSE : 22- 34: sdkck CkgCkCtNCkks-C csccp MT3_RAT : 22- 34: sdkck CkgCkCtNCkks-C csccp MTA_COLVI : 8- 20: agsck CknCrCrSCrks-C csccp MTA_ONCMY : 20- 33: ggsck CsnCaCtSCkkasC cdccp MTB_COLVI : 8- 20: agsck CknCrCrSCrks-C csccp MTB_ONCMY : 20- 32: ggsck CsnCaCtSCkks-C cpccp MT_CHICK : 22- 34: agsck CknCrCrSCrks-C csccp MT_ESOLU : 20- 32: ggsck CsnCaCtSCkks-C csccp MT_NOEBA : 20- 32: gatck CtnCqCtTCkks-C csccp MT_PLEPL : 20- 32: ggsct CknCsCtTCnks-C cpccp MT_XENLA : 22- 34: gttcs CsnCkCtSCkks-C csccp S 19: 21.5479 51( 51) C-x(2)-C-x(0,1)-C-x-[NPST]-C-x(2,4)-C Occurences: 51(51) MT1A_BOVIN : 21- 33: agsct CkaCrCpSCkks-C csccp MT1A_HORSE : 21- 33: agsck CkeCrCtSCkks-C csccp MT1A_HUMAN : 21- 33: tgsck CkeCkCnSCkks-C csccp MT1A_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT1B_HORSE : 21- 33: agsck CkqCrCaSCkks-C csccp MT1B_HUMAN : 21- 32: agsck CkeCkCtSCkk--C ccscc MT1B_HUMAN : 21- 33: agsck CkeCkCtSCkkc-C csccp MT1B_SHEEP : 21- 33: agsct CkaCrCpSCkks-C csccp MT1C_SHEEP : 21- 33: agsct CkaCrCpSCkks-C csccp MT1E_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1F_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1G_HUMAN : 21- 33: assck CkeCkCtSCkks-C csccp MT1H_HUMAN : 21- 33: agsck CkkCkCtSCkks-C csccp MT1I_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1K_HUMAN : 22- 34: assck CkeCkCtSCkks-C csccp MT1L_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT1_CERAE : 21- 33: adsck CkeCkCtSCkks-C csccp MT1_COLLI : 22- 34: gdnck CknCkCtSCkkg-C csccp MT1_CRIGR : 21- 33: ssscg CkdCkCtSCkks-C csccp MT1_HOMAM : 22- 33: ktgck CtsCrCaPCek--C tsgck MT1_MOUSE : 21- 33: tssca CknCkCtSCkks-C csccp MT1_RAT : 21- 33: ssscg CknCkCtSCkks-C csccp MT1_SCYSE : 22- 33: kegcq CtsCrCsPCek--C ssgck MT2A_RABIT : 22- 34: ansct CkaCkCtSCkks-C csccp MT2B_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT2C_RABIT : 22- 34: ansct CkaCkCtSCkks-C csccp MT2D_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT2E_RABIT : 21- 33: assck CkeCkCtSCkks-C csccp MT2_BOVIN : 21- 33: agsck CkdCkCaSCkks-C csccp MT2_CERAE : 21- 33: agsck CkeCkCtSCkks-C csccp MT2_COLLI : 22- 34: agsck CknCrCqSCrks-C csccr MT2_CRIGR : 21- 33: agsck CkeCkCtTCkks-C csccp MT2_HUMAN : 21- 33: agsck CkeCkCtSCkks-C csccp MT2_MESAU : 21- 33: sgsck CkeCkCtTCkks-C csccp MT2_MOUSE : 21- 33: agack CkqCkCtSCkks-C csccp MT2_RAT : 21- 33: agsck CkqCkCtSCkks-C csccp MT2_SCYSE : 22- 33: ktgck CtsCrCpPCeq--C ssgck MT2_STECO : 21- 33: pgsck CkeCkCtSCkks-C csccp MT3_BOVIN : 22- 34: sdpck CegCtCaSCkks-C csccp MT3_HORSE : 22- 34: sgeck CegCkCtSCkks-C csccp MT3_HUMAN : 22- 34: adsck CegCkCtSCkks-C csccp MT3_MOUSE : 22- 34: sdkck CkgCkCtNCkks-C csccp MT3_RAT : 22- 34: sdkck CkgCkCtNCkks-C csccp MTA_COLVI : 8- 20: agsck CknCrCrSCrks-C csccp MTA_ONCMY : 20- 33: ggsck CsnCaCtSCkkasC cdccp MTB_COLVI : 8- 20: agsck CknCrCrSCrks-C csccp MTB_ONCMY : 20- 32: ggsck CsnCaCtSCkks-C cpccp MT_CHICK : 22- 34: agsck CknCrCrSCrks-C csccp MT_ESOLU : 20- 32: ggsck CsnCaCtSCkks-C csccp MT_NOEBA : 20- 32: gatck CtnCqCtTCkks-C csccp MT_PLEPL : 20- 32: ggsct CknCsCtTCnks-C cpccp MT_XENLA : 22- 34: gttcs CsnCkCtSCkks-C csccp T 20: 19.8503 51( 51) C-C-x(3)-C-x(1,2)-C-x(3,4)-C Occurences: 51(51) MT1A_BOVIN : 36- 48: ksccs CCpvgCakCaqg-C vckga MT1A_HORSE : 36- 48: ksccs CCpggCarCaqg-C vckga MT1A_HUMAN : 36- 48: ksccs CCpmsCakCaqg-C ickga MT1A_RABIT : 36- 48: ksccs CCpagCtkCaqg-C ickga MT1B_HORSE : 36- 48: ksccs CCpvgCakCaqg-C vckga MT1B_HUMAN : 36- 48: kcccs CCpvgCakCaqg-C vckgs MT1B_SHEEP : 36- 48: ksccs CCpvgCakCaqg-C vckga MT1C_SHEEP : 36- 48: ksccs CCpvgCakCaqg-C ickga MT1E_HUMAN : 36- 48: ksccs CCpvgCakCaqg-C vckga MT1F_HUMAN : 36- 48: ksccs CCpvgCskCaqg-C vckga MT1G_HUMAN : 36- 48: ksccs CCpvgCakCaqg-C ickga MT1H_HUMAN : 36- 48: ksccs CCplgCakCaqg-C ickga MT1I_HUMAN : 36- 48: ksccs CCpvgCakCaqg-C ickga MT1K_HUMAN : 37- 49: ksccs CCpvgCakCaqg-C ickga MT1L_HUMAN : 36- 48: ksccs CCpvgCakCaqg-C ickgt MT1_CERAE : 36- 48: ksccs CCpvgCakCaqg-C vckga MT1_COLLI : 37- 49: kgccs CCpagCakCaqg-C vckgp MT1_CRIGR : 36- 48: ksccs CCpvgCskCaqg-C vckga MT1_HOMAM : 4- 16: pgp CCkdkCe-CaeggC ktgck MT1_MOUSE : 36- 48: ksccs CCpvgCskCaqg-C vckga MT1_RAT : 36- 48: ksccs CCpvgCskCaqg-C vckga MT1_SCYSE : 4- 16: pgp CCndkCv-CkeggC kegcq MT2A_RABIT : 37- 49: ksccs CCppgCakCaqg-C ickga MT2B_RABIT : 36- 48: ksccs CCpagCtkCaqg-C ickga MT2C_RABIT : 37- 49: ksccs CCppgCakCaqg-C ickga MT2D_RABIT : 36- 48: ksccs CCpagCtkCaqg-C ickga MT2E_RABIT : 36- 48: ksccs CCpagCtkCaqg-C ickga MT2_BOVIN : 36- 48: ksccs CCpvgCakCaqg-C vckga MT2_CERAE : 36- 48: ksccs CCpvgCakCaqg-C ickga MT2_COLLI : 37- 49: ksccs CCrasCsnCakg-C vckep MT2_CRIGR : 36- 48: ksccs CCpvgCakCsqg-C vckea MT2_HUMAN : 36- 48: ksccs CCpvgCakCaqg-C ickga MT2_MESAU : 36- 48: ksccs CCpvgCakCsqg-C vckea MT2_MOUSE : 36- 48: ksccs CCpvgCakCsqg-C ickea MT2_RAT : 36- 48: ksccs CCpvgCakCsqg-C ickea MT2_SCYSE : 4- 16: pdp CCndkCd-CkegeC ktgck MT2_STECO : 36- 48: ksccs CCpvgCakCaqg-C ickga MT3_BOVIN : 37- 49: ksccs CCpaeCekCakd-C vckgg MT3_HORSE : 37- 49: ksccs CCpaeCekCakd-C vckgg MT3_HUMAN : 37- 49: ksccs CCpaeCekCakd-C vckgg MT3_MOUSE : 37- 49: ksccs CCpagCekCakd-C vckge MT3_RAT : 37- 49: ksccs CCpagCekCakd-C vckge MTA_COLVI : 23- 35: ksccs CCpagCnnCakg-C vckep MTA_ONCMY : 36- 48: asccd CCpsgCskCasg-C vckgk MTB_COLVI : 23- 35: ksccs CCpagCnnCvkg-C vckep MTB_ONCMY : 35- 47: ksccp CCpsdCskCasg-C vckgk MT_CHICK : 37- 49: ksccs CCpagCnnCakg-C vckep MT_ESOLU : 35- 47: ksccs CCpsgCskCasg-C ickgk MT_NOEBA : 35- 47: ksccs CCpsgCskCasg-C vckgn MT_PLEPL : 35- 47: ksccp CCpsgCpkCasg-C vckgk MT_XENLA : 37- 49: ksccs CCpaeCskCsqg-C hcekg Number of patterns evaluated by Pratt:565 Total running time: 1 seconds