------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 42 sequences from file MDH PATTERN CONSERVATION: CM: min Nr of Seqs to Match 42 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename MDH.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: MDHC_ECHGR 332 MDHC_FLABI 453 MDHC_HUMAN 333 MDHC_MAIZE 432 MDHC_MESCR 441 MDHC_MOUSE 333 MDHC_PEA 441 MDHC_PIG 333 MDHC_SORBI 429 MDHC_SORVU 429 MDHC_YEAST 376 MDHD_SORVU 432 MDHG_CITVU 356 MDHG_CUCSA 356 MDHG_SOYBN 350 MDHM_CITVU 347 MDHM_EUCGU 347 MDHM_HUMAN 109 MDHM_MOUSE 338 MDHM_PIG 314 MDHM_RAT 338 MDHM_SCHMA 142 MDHM_YEAST 334 MDHP_YEAST 342 MDH_ACTMI 22 MDH_CHLAU 35 MDH_CHLTE 34 MDH_CHLVI 40 MDH_ECOLI 312 MDH_HAEIN 311 MDH_HELGE 30 MDH_KIBAR 20 MDH_MICGL 20 MDH_NITAL 32 MDH_PHEIM 25 MDH_PHOS9 312 MDH_PLAVE 24 MDH_SALTY 312 MDH_STRAR 31 MDH_STRRS 24 MDH_THEAL 23 MDH_THEFL 327 Pratt run started at Thu Feb 6 20:17:15 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 8.3401 131( 42) A-x(3)-G 2: 7.8401 214( 42) A-x(3,4)-G 3: 7.8401 150( 42) V-x(0,1)-G 4: 7.8401 228( 42) V-x(3,4)-A 5: 7.3401 302( 42) A-x(0,2)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 9.4815 103( 42) V-x(0,1)-G-[ADGNSV] B 2: 8.3401 131( 42) A-x(3)-G C 3: 7.8401 214( 42) A-x(3,4)-G D 4: 7.8401 228( 42) V-x(3,4)-A E 5: 7.3401 302( 42) A-x(0,2)-A Best patterns with alignements: fitness hits(seqs) Pattern A 1: 9.4815 103( 42) V-x(0,1)-G-[ADGNSV] Occurences: 103(42) MDHC_ECHGR : 87- 89: dvalm V-GA mprkg MDHC_FLABI : 115- 118: iinva VsGA agmis MDHC_FLABI : 234- 237: nvkvm VvGN pcntn MDHC_FLABI : 235- 237: vkvmv V-GN pcntn MDHC_HUMAN : 8- 11: pirvl VtGA agqia MDHC_HUMAN : 86- 88: dvail V-GS mprre MDHC_HUMAN : 127- 130: svkvi VvGN pantn MDHC_HUMAN : 128- 130: vkviv V-GN pantn MDHC_HUMAN : 206- 208: lqgee V-GV yeale MDHC_MAIZE : 94- 97: lvnva VsGA agmis MDHC_MAIZE : 213- 216: ndevl VvGN pcntn MDHC_MAIZE : 214- 216: devlv V-GN pcntn MDHC_MESCR : 45- 48: prpvs VrGG ircsv MDHC_MESCR : 102- 105: mitia VsGA agmis MDHC_MESCR : 221- 224: nvkvi VvGN pcntn MDHC_MESCR : 222- 224: vkviv V-GN pcntn MDHC_MOUSE : 8- 11: pirvl VtGA agqia MDHC_MOUSE : 86- 88: dvavl V-GS mprre MDHC_MOUSE : 127- 130: svkvi VvGN pantn MDHC_MOUSE : 128- 130: vkviv V-GN pantn MDHC_MOUSE : 206- 208: lqgke V-GV yealk MDHC_PEA : 103- 106: linia VsGA agmis MDHC_PEA : 222- 225: nakvi VvGN pcntn MDHC_PEA : 223- 225: akviv V-GN pcntn MDHC_PIG : 8- 11: pirvl VtGA agqia MDHC_PIG : 86- 88: dvail V-GS mprrd MDHC_PIG : 127- 130: svkvi VvGN pantn MDHC_PIG : 128- 130: vkviv V-GN pantn MDHC_PIG : 206- 208: lqake V-GV yeavk MDHC_SORBI : 10- 12: taysp V-GS hlapa MDHC_SORBI : 91- 94: lvnia VsGA agmis MDHC_SORBI : 210- 213: nvkvl VvGN pcntn MDHC_SORBI : 211- 213: vkvlv V-GN pcntn MDHC_SORVU : 10- 12: taysp V-GS hlapa MDHC_SORVU : 91- 94: lvnia VsGA agmis MDHC_SORVU : 210- 213: nvkvl VvGN pcntn MDHC_SORVU : 211- 213: vkvlv V-GN pcntn MDHC_YEAST : 210- 213: mpdvp ViGG hsget MDHC_YEAST : 314- 317: qllpl VdGA dyfai MDHD_SORVU : 57- 59: gvata V-GG gaasg MDHD_SORVU : 57- 60: gvata VgGG aasgn MDHD_SORVU : 94- 97: lvtia VsGA agmis MDHD_SORVU : 213- 216: nvkvl VvGN pcntn MDHD_SORVU : 214- 216: vkvlv V-GN pcntn MDHG_CITVU : 216- 219: dvdvp VvGG hagvt MDHG_CITVU : 217- 219: vdvpv V-GG hagvt MDHG_CUCSA : 216- 219: dvnvp VvGG hagvt MDHG_CUCSA : 217- 219: vnvpv V-GG hagvt MDHG_SOYBN : 198- 201: tfvae VlGV dprdv MDHG_SOYBN : 210- 213: dvdvp VvGG hagit MDHG_SOYBN : 211- 213: vdvpv V-GG hagit MDHG_SOYBN : 311- 313: vrlgr V-GV eeilp MDHM_CITVU : 39- 42: erkva VlGA aggig MDHM_CITVU : 206- 209: evnvp ViGG hagit MDHM_EUCGU : 39- 42: erkva VlGA aggig MDHM_EUCGU : 206- 209: evnvp VvGG hagit MDHM_EUCGU : 207- 209: vnvpv V-GG hagit MDHM_HUMAN : 29- 32: nakva VlGA sggig MDHM_MOUSE : 29- 32: nakva VlGA sggig MDHM_MOUSE : 196- 199: rvnvp ViGG hagkt MDHM_PIG : 5- 8: akva VlGA sggig MDHM_PIG : 172- 175: rvsvp ViGG hagkt MDHM_RAT : 9- 11: alarp V-GA alrrs MDHM_RAT : 29- 32: nakva VlGA sggig MDHM_RAT : 196- 199: rvnvp ViGG hagkt MDHM_SCHMA : 30- 33: ydiah VkGV aadls MDHM_YEAST : 22- 25: pykvt VlGA gggig MDHM_YEAST : 191- 194: qervn ViGG hsgit MDHP_YEAST : 141- 144: fkpgn VmGV tnldl MDHP_YEAST : 182- 185: hrkvt ViGG hsget MDHP_YEAST : 280- 282: kaqql V-GD nsiey MDH_ACTMI : 7- 10: epnvt VtGA agqig MDH_CHLAU : 13- 15: igagf V-GS ttahw MDH_CHLTE : 5- 8: mkit ViGA gnvga MDH_CHLTE : 11- 13: igagn V-GA ttafr MDH_CHLVI : 5- 8: mkit ViGA gnvga MDH_CHLVI : 11- 13: igagn V-GA ttafr MDH_ECOLI : 5- 8: mkva VlGA aggig MDH_ECOLI : 173- 176: evevp ViGG hsgvt MDH_ECOLI : 189- 192: pllsq VpGV sfteq MDH_ECOLI : 254- 257: vecay VeGD gqyar MDH_HAEIN : 5- 8: mkva VlGA aggig MDH_HAEIN : 173- 176: rtsvp ViGG hsgvt MDH_HAEIN : 253- 256: vecty VeGD gkyar MDH_HELGE : 13- 15: igagn V-GA taaxx MDH_KIBAR : 9- 12: pvnvt VtGA agqig MDH_MICGL : 6- 9: tvkvt VtGA agqig MDH_NITAL : 5- 8: rkva VmGA aggig MDH_PHEIM : 9- 12: pirva VtGA agnig MDH_PHOS9 : 5- 8: mkva ViGA aggig MDH_PHOS9 : 173- 176: elqvp ViGG hsgvt MDH_PHOS9 : 189- 192: pllsq VeGV efsde MDH_PHOS9 : 254- 257: vecay VeGD gkhar MDH_PLAVE : 9- 12: pvkvt VtGA agqig MDH_SALTY : 173- 176: evevp ViGG hsgvt MDH_SALTY : 254- 257: vecay VeGD gqyar MDH_STRAR : 9- 12: pvnvt VtGA agqig MDH_STRRS : 9- 12: pvkvt VtGA agqig MDH_THEAL : 13- 16: haman VrGD ieylt MDH_THEFL : 9- 12: pvrva VtGA agqig MDH_THEFL : 87- 89: dyall V-GA aprka MDH_THEFL : 128- 131: dvkvl VvGN pantn MDH_THEFL : 129- 131: vkvlv V-GN pantn MDH_THEFL : 183- 186: irrmt VwGN hsstm B 2: 8.3401 131( 42) A-x(3)-G Occurences: 131(42) MDHC_ECHGR : 84- 88: tdidv AlmvG amprk MDHC_ECHGR : 126- 130: kktvk AlvvG qpant MDHC_ECHGR : 168- 172: aiyqv AakaG vpntc MDHC_ECHGR : 232- 236: vqnrg AaviG lrkls MDHC_FLABI : 154- 158: sersf AaleG vamel MDHC_FLABI : 190- 194: qdaew AlliG akprg MDHC_FLABI : 195- 199: allig AkprG pgmer MDHC_FLABI : 274- 278: akcql AlkaG vfydk MDHC_FLABI : 304- 308: pdfln AkihG ipvte MDHC_FLABI : 431- 435: ekkcv AhltG egiav MDHC_HUMAN : 83- 87: kdldv AilvG smprr MDHC_HUMAN : 167- 171: akaqi AlklG vtand MDHC_MAIZE : 169- 173: qdvdw AlliG akprg MDHC_MAIZE : 174- 178: allig AkprG pgmer MDHC_MAIZE : 253- 257: akcql AlkaG vfydk MDHC_MAIZE : 283- 287: pdfln AkidG rpvke MDHC_MAIZE : 410- 414: ekkcv AhltG egnaf MDHC_MESCR : 160- 164: ypllr AvsiG idpyd MDHC_MESCR : 177- 181: qdaew AlliG akprg MDHC_MESCR : 182- 186: allig AkprG pgmer MDHC_MESCR : 261- 265: akcql AlkaG vfydk MDHC_MESCR : 291- 295: pdfln AkidG lpvkt MDHC_MESCR : 418- 422: ekrct AhltG egvav MDHC_MOUSE : 83- 87: kdldv AvlvG smprr MDHC_MOUSE : 167- 171: aksqi AlklG vtadd MDHC_PEA : 178- 182: qdaew AlliG akprg MDHC_PEA : 183- 187: allig AkprG pgver MDHC_PEA : 262- 266: akcql AlkaG vfydk MDHC_PEA : 292- 296: pdfln AridG lpvke MDHC_PEA : 419- 423: ekkcv AhltG egiav MDHC_PIG : 83- 87: kdldv AilvG smprr MDHC_PIG : 167- 171: akaqi AlklG vtsdd MDHC_PIG : 203- 207: kvklq AkevG vyeav MDHC_SORBI : 166- 170: edvdw AlliG akprg MDHC_SORBI : 171- 175: allig AkprG pgmer MDHC_SORBI : 250- 254: akcql AlkaG vfydk MDHC_SORBI : 280- 284: pdfln AkidG rpvke MDHC_SORBI : 407- 411: ekkcv AhltG egnay MDHC_SORVU : 166- 170: edvdw AlliG akprg MDHC_SORVU : 171- 175: allig AkprG pgmer MDHC_SORVU : 250- 254: akcql AlkaG vfydk MDHC_SORVU : 280- 284: pdfln AkidG rpvke MDHC_SORVU : 407- 411: ekkcv AhltG egnay MDHC_YEAST : 21- 25: ailga AggiG qslsl MDHD_SORVU : 54- 58: vqdgv AtavG ggaas MDHD_SORVU : 56- 60: dgvat AvggG aasgn MDHD_SORVU : 169- 173: qdvdw AlliG akprg MDHD_SORVU : 174- 178: allig AkprG pgmer MDHD_SORVU : 253- 257: akcqi AlkaG vfydk MDHD_SORVU : 283- 287: pdfln AkidG rpvke MDHD_SORVU : 410- 414: ekkcv AhltG egdaf MDHG_CITVU : 53- 57: ailga AggiG qplam MDHG_CITVU : 95- 99: hmdtg AvvrG flgqq MDHG_CITVU : 108- 112: qqqle AaltG mdlii MDHG_CITVU : 202- 206: antfv AevlG ldprd MDHG_CITVU : 281- 285: vkfad AclrG lrgda MDHG_CUCSA : 53- 57: ailga AggiG qplam MDHG_CUCSA : 95- 99: hmdtg AvvrG flgqq MDHG_CUCSA : 202- 206: antfv AevlG ldprd MDHG_CUCSA : 281- 285: vkfad AclrG lrgda MDHG_SOYBN : 47- 51: ailga AggiG qplam MDHG_SOYBN : 89- 93: hmdtg AvvrG flgqq MDHG_SOYBN : 196- 200: antfv AevlG vdprd MDHM_CITVU : 43- 47: avlga AggiG qplal MDHM_CITVU : 69- 73: alydi AgtpG vaadv MDHM_CITVU : 75- 79: gtpgv AadvG hvntr MDHM_CITVU : 271- 275: alfad AclkG lngvp MDHM_EUCGU : 43- 47: avlga AggiG qplal MDHM_EUCGU : 69- 73: alydi AgtpG vaadv MDHM_EUCGU : 75- 79: gtpgv AadvG hintr MDHM_EUCGU : 88- 92: trsev AgyvG eeqlg MDHM_EUCGU : 271- 275: alfad AclkG lngvp MDHM_HUMAN : 59- 63: tlydi AhtpG vaadl MDHM_HUMAN : 75- 79: hietk AavkG ylgpe MDHM_MOUSE : 6- 10: mlsal ArpaG aalrr MDHM_MOUSE : 59- 63: tlydi AhtpG vaadl MDHM_MOUSE : 75- 79: hietr AnvkG ylgpe MDHM_MOUSE : 182- 186: antfv AelkG ldpar MDHM_MOUSE : 224- 228: pqdql AtltG riqea MDHM_PIG : 35- 39: tlydi AhtpG vaadl MDHM_PIG : 51- 55: hietr AtvkG ylgpe MDHM_PIG : 158- 162: anafv AelkG ldpar MDHM_RAT : 6- 10: mlsal ArpvG aalrr MDHM_RAT : 59- 63: tlydi AhtpG vaadl MDHM_RAT : 75- 79: hietr AnvkG ylgpe MDHM_RAT : 182- 186: antfv AelkG ldpar MDHM_RAT : 224- 228: pqdql AtltG kiqea MDHM_SCHMA : 28- 32: alydi AhvkG vaadl MDHM_YEAST : 255- 259: akfan AvlsG fkger MDHP_YEAST : 37- 41: ydira AegiG kdlsh MDH_ACTMI : 11- 15: tvtga AgqiG yallf MDH_CHLAU : 10- 14: isiig AgfvG sttah MDH_CHLAU : 23- 27: ahwla AkelG divll MDH_CHLTE : 8- 12: itvig AgnvG attaf MDH_CHLVI : 8- 12: itvig AgnvG attaf MDH_ECOLI : 9- 13: avlga AggiG qalal MDH_ECOLI : 80- 84: isagv ArkpG mdrsd MDH_ECOLI : 159- 163: sntfv AelkG kqpge MDH_ECOLI : 216- 220: tevve AkagG gsatl MDH_ECOLI : 231- 235: smgqa AarfG lslvr MDH_ECOLI : 252- 256: gvvec AyveG dgqya MDH_HAEIN : 9- 13: avlga AggiG qalal MDH_HAEIN : 80- 84: isagv ArkpG mdrsd MDH_HAEIN : 159- 163: setfv AelkG lnvsr MDH_HAEIN : 216- 220: tevln AkagG gsatl MDH_HELGE : 10- 14: itiig AgnvG ataax MDH_KIBAR : 13- 17: tvtga AgqiG yal MDH_MICGL : 10- 14: tvtga AgqiG yallf MDH_NITAL : 9- 13: avmga AggiG qplsl MDH_PHEIM : 13- 17: avtga AgniG yhllf MDH_PHOS9 : 9- 13: aviga AggiG qalal MDH_PHOS9 : 80- 84: isagv ArkpG mdrsd MDH_PHOS9 : 159- 163: setfv AelkG ktpse MDH_PHOS9 : 216- 220: tevve AkrgG gsatl MDH_PHOS9 : 231- 235: smgqa AyrfG lslvr MDH_PHOS9 : 252- 256: givec AyveG dgkha MDH_PLAVE : 13- 17: tvtga AgqiG yallf MDH_SALTY : 7- 11: kvavl AaagG igqal MDH_SALTY : 9- 13: avlaa AggiG qalal MDH_SALTY : 80- 84: isagv ArkpG mdrsd MDH_SALTY : 159- 163: snpfv AelkG klpte MDH_SALTY : 216- 220: tevve AkagG gsatl MDH_SALTY : 231- 235: smgqa AarfG vslvr MDH_SALTY : 252- 256: gvvec AyveG dgqya MDH_STRAR : 13- 17: tvtga AgqiG yallf MDH_STRRS : 13- 17: tvtga AgqiG yallf MDH_THEAL : 11- 15: lvham AnvrG dieyl MDH_THEFL : 13- 17: avtga AgqiG ysllf MDH_THEFL : 84- 88: kdady AllvG aaprk MDH_THEFL : 168- 172: akaql AkktG tgvdr MDH_THEFL : 198- 202: pdlfh AevdG rpale C 3: 7.8401 214( 42) A-x(3,4)-G Occurences: 214(42) MDHC_ECHGR : 84- 88: tdidv Almv-G amprk MDHC_ECHGR : 89- 94: almvg AmprkG ygaar MDHC_ECHGR : 126- 130: kktvk Alvv-G qpant MDHC_ECHGR : 168- 172: aiyqv Aaka-G vpntc MDHC_ECHGR : 232- 236: vqnrg Aavi-G lrkls MDHC_FLABI : 154- 158: sersf Aale-G vamel MDHC_FLABI : 190- 194: qdaew Alli-G akprg MDHC_FLABI : 195- 199: allig Akpr-G pgmer MDHC_FLABI : 274- 278: akcql Alka-G vfydk MDHC_FLABI : 304- 308: pdfln Akih-G ipvte MDHC_FLABI : 431- 435: ekkcv Ahlt-G egiav MDHC_HUMAN : 83- 87: kdldv Ailv-G smprr MDHC_HUMAN : 167- 171: akaqi Alkl-G vtand MDHC_MAIZE : 122- 127: qdqpi AlkllG sersf MDHC_MAIZE : 169- 173: qdvdw Alli-G akprg MDHC_MAIZE : 174- 178: allig Akpr-G pgmer MDHC_MAIZE : 253- 257: akcql Alka-G vfydk MDHC_MAIZE : 283- 287: pdfln Akid-G rpvke MDHC_MAIZE : 410- 414: ekkcv Ahlt-G egnaf MDHC_MESCR : 63- 68: vqapv AvpaeG qtgkp MDHC_MESCR : 66- 71: pvavp AegqtG kpecy MDHC_MESCR : 130- 135: pdqpi AlkllG sersf MDHC_MESCR : 160- 164: ypllr Avsi-G idpyd MDHC_MESCR : 177- 181: qdaew Alli-G akprg MDHC_MESCR : 182- 186: allig Akpr-G pgmer MDHC_MESCR : 242- 247: apnip AknfhG ltrld MDHC_MESCR : 261- 265: akcql Alka-G vfydk MDHC_MESCR : 291- 295: pdfln Akid-G lpvkt MDHC_MESCR : 359- 364: dwfss AvytnG npygi MDHC_MESCR : 418- 422: ekrct Ahlt-G egvav MDHC_MOUSE : 83- 87: kdldv Avlv-G smprr MDHC_MOUSE : 167- 171: aksqi Alkl-G vtadd MDHC_PEA : 131- 136: pdqpi AlkllG sersi MDHC_PEA : 178- 182: qdaew Alli-G akprg MDHC_PEA : 183- 187: allig Akpr-G pgver MDHC_PEA : 262- 266: akcql Alka-G vfydk MDHC_PEA : 292- 296: pdfln Arid-G lpvke MDHC_PEA : 419- 423: ekkcv Ahlt-G egiav MDHC_PIG : 83- 87: kdldv Ailv-G smprr MDHC_PIG : 167- 171: akaqi Alkl-G vtsdd MDHC_PIG : 203- 207: kvklq Akev-G vyeav MDHC_SORBI : 6- 11: mglst AyspvG shlap MDHC_SORBI : 15- 20: vgshl ApaplG hrrsa MDHC_SORBI : 119- 124: qdqpi AlkllG sersf MDHC_SORBI : 166- 170: edvdw Alli-G akprg MDHC_SORBI : 171- 175: allig Akpr-G pgmer MDHC_SORBI : 250- 254: akcql Alka-G vfydk MDHC_SORBI : 280- 284: pdfln Akid-G rpvke MDHC_SORBI : 407- 411: ekkcv Ahlt-G egnay MDHC_SORVU : 6- 11: mglst AyspvG shlap MDHC_SORVU : 15- 20: vgshl ApaplG hrrsa MDHC_SORVU : 119- 124: qdqpi AlkllG sersf MDHC_SORVU : 166- 170: edvdw Alli-G akprg MDHC_SORVU : 171- 175: allig Akpr-G pgmer MDHC_SORVU : 250- 254: akcql Alka-G vfydk MDHC_SORVU : 280- 284: pdfln Akid-G rpvke MDHC_SORVU : 407- 411: ekkcv Ahlt-G egnay MDHC_YEAST : 20- 25: iailg AaggiG qslsl MDHC_YEAST : 21- 25: ailga Aggi-G qslsl MDHC_YEAST : 254- 259: devvk AkngkG satls MDHD_SORVU : 6- 11: mglst AyspaG sglvp MDHD_SORVU : 54- 58: vqdgv Atav-G ggaas MDHD_SORVU : 54- 59: vqdgv AtavgG gaasg MDHD_SORVU : 56- 60: dgvat Avgg-G aasgn MDHD_SORVU : 122- 127: qdqpi AlkllG sersf MDHD_SORVU : 169- 173: qdvdw Alli-G akprg MDHD_SORVU : 174- 178: allig Akpr-G pgmer MDHD_SORVU : 253- 257: akcqi Alka-G vfydk MDHD_SORVU : 283- 287: pdfln Akid-G rpvke MDHD_SORVU : 410- 414: ekkcv Ahlt-G egdaf MDHG_CITVU : 52- 57: vailg AaggiG qplam MDHG_CITVU : 53- 57: ailga Aggi-G qplam MDHG_CITVU : 95- 99: hmdtg Avvr-G flgqq MDHG_CITVU : 108- 112: qqqle Aalt-G mdlii MDHG_CITVU : 202- 206: antfv Aevl-G ldprd MDHG_CITVU : 260- 265: tevve AkagaG satls MDHG_CITVU : 281- 285: vkfad Aclr-G lrgda MDHG_CUCSA : 52- 57: vailg AaggiG qplam MDHG_CUCSA : 53- 57: ailga Aggi-G qplam MDHG_CUCSA : 95- 99: hmdtg Avvr-G flgqq MDHG_CUCSA : 202- 206: antfv Aevl-G ldprd MDHG_CUCSA : 260- 265: tevve AkagaG satls MDHG_CUCSA : 281- 285: vkfad Aclr-G lrgda MDHG_SOYBN : 46- 51: vailg AaggiG qplam MDHG_SOYBN : 47- 51: ailga Aggi-G qplam MDHG_SOYBN : 89- 93: hmdtg Avvr-G flgqq MDHG_SOYBN : 196- 200: antfv Aevl-G vdprd MDHG_SOYBN : 254- 259: pevve AkagaG satls MDHG_SOYBN : 339- 344: kkela AsiekG isfir MDHM_CITVU : 42- 47: vavlg AaggiG qplal MDHM_CITVU : 43- 47: avlga Aggi-G qplal MDHM_CITVU : 69- 73: alydi Agtp-G vaadv MDHM_CITVU : 75- 79: gtpgv Aadv-G hvntr MDHM_CITVU : 250- 255: tevve AkagkG satls MDHM_CITVU : 271- 275: alfad Aclk-G lngvp MDHM_CITVU : 335- 340: kpelk AsiekG iqfan MDHM_EUCGU : 42- 47: vavlg AaggiG qplal MDHM_EUCGU : 43- 47: avlga Aggi-G qplal MDHM_EUCGU : 69- 73: alydi Agtp-G vaadv MDHM_EUCGU : 75- 79: gtpgv Aadv-G hintr MDHM_EUCGU : 88- 92: trsev Agyv-G eeqlg MDHM_EUCGU : 250- 255: tevve AkagkG satls MDHM_EUCGU : 271- 275: alfad Aclk-G lngvp MDHM_EUCGU : 336- 341: ipelk AsiekG ikfan MDHM_HUMAN : 32- 37: vavlg AsggiG qplsl MDHM_HUMAN : 59- 63: tlydi Ahtp-G vaadl MDHM_HUMAN : 75- 79: hietk Aavk-G ylgpe MDHM_MOUSE : 6- 10: mlsal Arpa-G aalrr MDHM_MOUSE : 32- 37: vavlg AsggiG qplsl MDHM_MOUSE : 59- 63: tlydi Ahtp-G vaadl MDHM_MOUSE : 75- 79: hietr Anvk-G ylgpe MDHM_MOUSE : 182- 186: antfv Aelk-G ldpar MDHM_MOUSE : 224- 228: pqdql Atlt-G riqea MDHM_MOUSE : 240- 245: tevvk AkagaG satls MDHM_MOUSE : 325- 330: ipelk AsikkG edfvk MDHM_PIG : 8- 13: vavlg AsggiG qplsl MDHM_PIG : 35- 39: tlydi Ahtp-G vaadl MDHM_PIG : 51- 55: hietr Atvk-G ylgpe MDHM_PIG : 158- 162: anafv Aelk-G ldpar MDHM_PIG : 216- 221: tevvk AkagaG satls MDHM_PIG : 301- 306: ipelk AsikkG eefvk MDHM_RAT : 6- 10: mlsal Arpv-G aalrr MDHM_RAT : 32- 37: vavlg AsggiG qplsl MDHM_RAT : 59- 63: tlydi Ahtp-G vaadl MDHM_RAT : 75- 79: hietr Anvk-G ylgpe MDHM_RAT : 182- 186: antfv Aelk-G ldpar MDHM_RAT : 224- 228: pqdql Atlt-G kiqea MDHM_RAT : 240- 245: tevvk AkagaG satls MDHM_RAT : 325- 330: ipelk AsikkG edfvk MDHM_SCHMA : 1- 6: AsggiG eplsl MDHM_SCHMA : 28- 32: alydi Ahvk-G vaadl MDHM_SCHMA : 48- 53: qahvt AhlgpG elaec MDHM_SCHMA : 56- 61: gpgel AecltG anvvi MDHM_YEAST : 25- 30: vtvlg AgggiG qplsl MDHM_YEAST : 234- 239: devvk AkngaG satls MDHM_YEAST : 255- 259: akfan Avls-G fkger MDHP_YEAST : 8- 13: vailg AsggvG qplsl MDHP_YEAST : 36- 41: lydir AaegiG kdlsh MDHP_YEAST : 37- 41: ydira Aegi-G kdlsh MDHP_YEAST : 225- 230: deivk AkqgaG satls MDHP_YEAST : 276- 281: kngkk AqqlvG dnsie MDH_ACTMI : 10- 15: vtvtg AagqiG yallf MDH_ACTMI : 11- 15: tvtga Agqi-G yallf MDH_CHLAU : 10- 14: isiig Agfv-G sttah MDH_CHLAU : 22- 27: tahwl AakelG divll MDH_CHLAU : 23- 27: ahwla Akel-G divll MDH_CHLTE : 8- 12: itvig Agnv-G attaf MDH_CHLVI : 8- 12: itvig Agnv-G attaf MDH_ECOLI : 8- 13: vavlg AaggiG qalal MDH_ECOLI : 9- 13: avlga Aggi-G qalal MDH_ECOLI : 36- 41: slydi ApvtpG vavdl MDH_ECOLI : 52- 57: shipt AvkikG fsged MDH_ECOLI : 80- 84: isagv Arkp-G mdrsd MDH_ECOLI : 159- 163: sntfv Aelk-G kqpge MDH_ECOLI : 216- 220: tevve Akag-G gsatl MDH_ECOLI : 216- 221: tevve AkaggG satls MDH_ECOLI : 223- 228: agggs AtlsmG qaaar MDH_ECOLI : 230- 235: lsmgq AaarfG lslvr MDH_ECOLI : 231- 235: smgqa Aarf-G lslvr MDH_ECOLI : 252- 256: gvvec Ayve-G dgqya MDH_HAEIN : 8- 13: vavlg AaggiG qalal MDH_HAEIN : 9- 13: avlga Aggi-G qalal MDH_HAEIN : 36- 41: slydi ApvtpG vavdv MDH_HAEIN : 52- 57: shipt AvnvkG fsged MDH_HAEIN : 80- 84: isagv Arkp-G mdrsd MDH_HAEIN : 95- 100: lfnin AgivrG liekv MDH_HAEIN : 159- 163: setfv Aelk-G lnvsr MDH_HAEIN : 216- 220: tevln Akag-G gsatl MDH_HAEIN : 216- 221: tevln AkaggG satls MDH_HAEIN : 300- 305: lptlr AdielG ekfin MDH_HELGE : 10- 14: itiig Agnv-G ataax MDH_HELGE : 22- 27: aaxxa AskdlG div MDH_KIBAR : 12- 17: vtvtg AagqiG yal MDH_KIBAR : 13- 17: tvtga Agqi-G yal MDH_MICGL : 9- 14: vtvtg AagqiG yallf MDH_MICGL : 10- 14: tvtga Agqi-G yallf MDH_NITAL : 8- 13: vavmg AaggiG qplsl MDH_NITAL : 9- 13: avmga Aggi-G qplsl MDH_PHEIM : 12- 17: vavtg AagniG yhllf MDH_PHEIM : 13- 17: avtga Agni-G yhllf MDH_PHOS9 : 8- 13: vavig AaggiG qalal MDH_PHOS9 : 9- 13: aviga Aggi-G qalal MDH_PHOS9 : 36- 41: alydi ApvtpG vaadl MDH_PHOS9 : 80- 84: isagv Arkp-G mdrsd MDH_PHOS9 : 159- 163: setfv Aelk-G ktpse MDH_PHOS9 : 216- 220: tevve Akrg-G gsatl MDH_PHOS9 : 216- 221: tevve AkrggG satls MDH_PHOS9 : 223- 228: rgggs AtlsmG qaayr MDH_PHOS9 : 230- 235: lsmgq AayrfG lslvr MDH_PHOS9 : 231- 235: smgqa Ayrf-G lslvr MDH_PHOS9 : 252- 256: givec Ayve-G dgkha MDH_PLAVE : 12- 17: vtvtg AagqiG yallf MDH_PLAVE : 13- 17: tvtga Agqi-G yallf MDH_SALTY : 7- 11: kvavl Aaag-G igqal MDH_SALTY : 8- 13: vavla AaggiG qalal MDH_SALTY : 9- 13: avlaa Aggi-G qalal MDH_SALTY : 36- 41: slydi ApvtpG vavdl MDH_SALTY : 52- 57: shipt AvkikG fsged MDH_SALTY : 80- 84: isagv Arkp-G mdrsd MDH_SALTY : 159- 163: snpfv Aelk-G klpte MDH_SALTY : 216- 220: tevve Akag-G gsatl MDH_SALTY : 216- 221: tevve AkaggG satls MDH_SALTY : 223- 228: agggs AtlsmG qaaar MDH_SALTY : 230- 235: lsmgq AaarfG vslvr MDH_SALTY : 231- 235: smgqa Aarf-G vslvr MDH_SALTY : 252- 256: gvvec Ayve-G dgqya MDH_STRAR : 12- 17: vtvtg AagqiG yallf MDH_STRAR : 13- 17: tvtga Agqi-G yallf MDH_STRRS : 12- 17: vtvtg AagqiG yallf MDH_STRRS : 13- 17: tvtga Agqi-G yallf MDH_THEAL : 11- 15: lvham Anvr-G dieyl MDH_THEFL : 12- 17: vavtg AagqiG ysllf MDH_THEFL : 13- 17: avtga Agqi-G ysllf MDH_THEFL : 26- 31: lfria AgemlG kdqpv MDH_THEFL : 84- 88: kdady Allv-G aaprk MDH_THEFL : 90- 95: llvga AprkaG merrd MDH_THEFL : 168- 172: akaql Akkt-G tgvdr MDH_THEFL : 198- 202: pdlfh Aevd-G rpale MDH_THEFL : 265- 270: dwvsm AvpsqG eygip D 4: 7.8401 228( 42) V-x(3,4)-A Occurences: 228(42) MDHC_ECHGR : 7- 12: pgplr VlitgA agqia MDHC_ECHGR : 128- 133: tvkal VvgqpA ntncl MDHC_ECHGR : 129- 133: vkalv Vgqp-A ntncl MDHC_ECHGR : 167- 171: raiyq Vaak-A gvpnt MDHC_ECHGR : 227- 232: vftpc VqnrgA avigl MDHC_FLABI : 113- 118: kkiin VavsgA agmis MDHC_FLABI : 115- 119: iinva Vsga-A gmisn MDHC_FLABI : 350- 355: aasta VsivdA irslv MDHC_HUMAN : 6- 11: sepir VlvtgA agqia MDHC_HUMAN : 8- 12: pirvl Vtga-A gqiay MDHC_HUMAN : 127- 132: svkvi VvgnpA ntncl MDHC_HUMAN : 128- 132: vkviv Vgnp-A ntncl MDHC_HUMAN : 206- 211: lqgee VgvyeA ledds MDHC_HUMAN : 226- 231: efvtt VqqrsA avika MDHC_MAIZE : 6- 10: mglst Vysp-A gprlv MDHC_MAIZE : 52- 57: qaqdg VatavA teapa MDHC_MAIZE : 56- 60: gvata Vate-A pasrk MDHC_MAIZE : 92- 97: rklvn VavsgA agmis MDHC_MAIZE : 94- 98: lvnva Vsga-A gmisn MDHC_MAIZE : 329- 334: aasta VsivdA irslv MDHC_MESCR : 58- 63: vapnq VqapvA vpaeg MDHC_MESCR : 62- 66: qvqap Vavp-A egqtg MDHC_MESCR : 102- 106: mitia Vsga-A gmisn MDHC_MESCR : 337- 342: aasta VsiadA ikslv MDHC_MESCR : 427- 432: gegva VcdlpA gdtml MDHC_MOUSE : 6- 11: sepir VlvtgA agqia MDHC_MOUSE : 8- 12: pirvl Vtga-A gqiay MDHC_MOUSE : 127- 132: svkvi VvgnpA ntncl MDHC_MOUSE : 128- 132: vkviv Vgnp-A ntncl MDHC_MOUSE : 206- 211: lqgke VgvyeA lkdds MDHC_MOUSE : 226- 231: efitt VqqrgA avika MDHC_PEA : 60- 64: vapnq Vqvp-A aqtqd MDHC_PEA : 60- 65: vapnq VqvpaA qtqdp MDHC_PEA : 103- 107: linia Vsga-A gmisn MDHC_PEA : 171- 175: idpye Vfqd-A ewall MDHC_PEA : 190- 194: prgpg Vera-A lldin MDHC_PEA : 213- 218: kalna VasrnA kvivv MDHC_PEA : 338- 343: aasts VsivdA irsli MDHC_PIG : 6- 11: sepir VlvtgA agqia MDHC_PIG : 8- 12: pirvl Vtga-A gqiay MDHC_PIG : 127- 132: svkvi VvgnpA ntncl MDHC_PIG : 128- 132: vkviv Vgnp-A ntncl MDHC_PIG : 199- 203: vnhak Vklq-A kevgv MDHC_PIG : 206- 211: lqake VgvyeA vkdds MDHC_PIG : 226- 231: efitt VqqrgA avika MDHC_SORBI : 10- 15: taysp VgshlA paplg MDHC_SORBI : 48- 53: daakq VqdgvA taeap MDHC_SORBI : 52- 57: qvqdg VataeA patrk MDHC_SORBI : 91- 95: lvnia Vsga-A gmisn MDHC_SORBI : 326- 331: aasta VsiadA ikslv MDHC_SORVU : 10- 15: taysp VgshlA paplg MDHC_SORVU : 48- 53: daakq VqdgvA taeap MDHC_SORVU : 52- 57: qvqdg VataeA patrk MDHC_SORVU : 91- 95: lvnia Vsga-A gmisn MDHC_SORVU : 326- 331: aasta VsiadA ikslv MDHC_YEAST : 57- 61: lalyd Vnqe-A ingvt MDHC_YEAST : 97- 101: hnasi Vvip-A gvprk MDHC_YEAST : 293- 298: hgtyy VplkdA nnfpi MDHC_YEAST : 369- 374: kglef VasrsA ss MDHD_SORVU : 15- 20: agsgl VpaplA raarr MDHD_SORVU : 42- 46: tvrcs Vvda-A kqvqd MDHD_SORVU : 49- 54: daakq VqdgvA tavgg MDHD_SORVU : 57- 61: gvata Vggg-A asgne MDHD_SORVU : 57- 62: gvata VgggaA sgnec MDHD_SORVU : 94- 98: lvtia Vsga-A gmisn MDHD_SORVU : 329- 334: aasta VsivdA ikslv MDHG_CITVU : 7- 12: qpipd VnqriA risah MDHG_CITVU : 47- 52: apgfk VailgA aggig MDHG_CITVU : 168- 172: pvnst Vpia-A evfkk MDHG_CITVU : 174- 178: piaae Vfkk-A gtydp MDHG_CITVU : 216- 221: dvdvp VvgghA gvtil MDHG_CITVU : 217- 221: vdvpv Vggh-A gvtil MDHG_CITVU : 257- 262: nggte VveakA gagsa MDHG_CITVU : 258- 262: ggtev Veak-A gagsa MDHG_CITVU : 276- 281: mayaa VkfadA clrgl MDHG_CITVU : 292- 296: rgdag Viec-A fvssq MDHG_CUCSA : 7- 12: qpipd VnqriA risah MDHG_CUCSA : 30- 34: meess Vlrr-A ncrak MDHG_CUCSA : 47- 52: apgfk VailgA aggig MDHG_CUCSA : 116- 120: tgmdl Vvip-A gvprk MDHG_CUCSA : 168- 172: pvnst Vpia-A evfkk MDHG_CUCSA : 174- 178: piaae Vfkk-A gtydp MDHG_CUCSA : 216- 221: dvnvp VvgghA gvtil MDHG_CUCSA : 217- 221: vnvpv Vggh-A gvtil MDHG_CUCSA : 257- 262: nggte VveakA gagsa MDHG_CUCSA : 258- 262: ggtev Veak-A gagsa MDHG_CUCSA : 276- 281: mayaa VkfadA clrgl MDHG_CUCSA : 292- 296: rgdag Vvec-A fvssq MDHG_SOYBN : 41- 46: vsgfk VailgA aggig MDHG_SOYBN : 110- 114: igmdl Viip-A gvprk MDHG_SOYBN : 162- 166: pvnst Vpia-A evfkr MDHG_SOYBN : 168- 172: piaae Vfkr-A gtydp MDHG_SOYBN : 210- 215: dvdvp VvgghA gitil MDHG_SOYBN : 211- 215: vdvpv Vggh-A gitil MDHG_SOYBN : 251- 256: nggpe VveakA gagsa MDHG_SOYBN : 252- 256: ggpev Veak-A gagsa MDHG_SOYBN : 270- 275: mayaa VkfadA clhal MDHM_CITVU : 37- 42: vperk VavlgA aggig MDHM_CITVU : 39- 43: erkva Vlga-A ggigq MDHM_CITVU : 60- 64: klnpl Vskl-A lydia MDHM_CITVU : 105- 110: legsd VviipA gvprk MDHM_CITVU : 106- 110: egsdv Viip-A gvprk MDHM_CITVU : 158- 162: pvnst Vpia-A evfkk MDHM_CITVU : 164- 168: piaae Vfkk-A gtyde MDHM_CITVU : 206- 211: evnvp VigghA gitil MDHM_CITVU : 247- 252: dggte VveakA gkgsa MDHM_CITVU : 248- 252: ggtev Veak-A gkgsa MDHM_EUCGU : 37- 42: vperk VavlgA aggig MDHM_EUCGU : 39- 43: erkva Vlga-A ggigq MDHM_EUCGU : 60- 64: klnpl Vsql-A lydia MDHM_EUCGU : 105- 110: legsd VviipA gvprk MDHM_EUCGU : 106- 110: egsdv Viip-A gvprk MDHM_EUCGU : 158- 162: pvnst Vpia-A eifkk MDHM_EUCGU : 206- 211: evnvp VvgghA gitil MDHM_EUCGU : 207- 211: vnvpv Vggh-A gitil MDHM_EUCGU : 247- 252: dggte VveakA gkgsa MDHM_EUCGU : 248- 252: ggtev Veak-A gkgsa MDHM_HUMAN : 27- 32: qnnak VavlgA sggig MDHM_MOUSE : 27- 32: qnnak VavlgA sggig MDHM_MOUSE : 95- 100: lkgcd VvvipA gvprk MDHM_MOUSE : 96- 100: kgcdv Vvip-A gvprk MDHM_MOUSE : 121- 126: tnati VatltA acaqh MDHM_MOUSE : 137- 141: cpeam Vcii-A npvns MDHM_MOUSE : 196- 201: rvnvp VigghA gktii MDHM_MOUSE : 237- 242: eagte VvkakA gagsa MDHM_MOUSE : 238- 242: agtev Vkak-A gagsa MDHM_PIG : 3- 8: ak VavlgA sggig MDHM_PIG : 71- 76: lkgcd VvvipA gvprk MDHM_PIG : 72- 76: kgcdv Vvip-A gvprk MDHM_PIG : 97- 102: tnati VatltA acaqh MDHM_PIG : 151- 155: ttldi Vran-A fvael MDHM_PIG : 172- 177: rvsvp VigghA gktii MDHM_PIG : 213- 218: eagte VvkakA gagsa MDHM_PIG : 214- 218: agtev Vkak-A gagsa MDHM_RAT : 27- 32: qnnak VavlgA sggig MDHM_RAT : 95- 100: lkgcd VvvipA gvprk MDHM_RAT : 96- 100: kgcdv Vvip-A gvprk MDHM_RAT : 121- 126: tnati VatltA acaqh MDHM_RAT : 196- 201: rvnvp VigghA gktii MDHM_RAT : 237- 242: eagte VvkakA gagsa MDHM_RAT : 238- 242: agtev Vkak-A gagsa MDHM_SCHMA : 30- 34: ydiah Vkgv-A adlsh MDHM_SCHMA : 30- 35: ydiah VkgvaA dlshi MDHM_SCHMA : 64- 69: ltgan VviipA glprk MDHM_SCHMA : 65- 69: tganv Viip-A glprk MDHM_SCHMA : 117- 121: pvnst Vpia-A eilkr MDHM_YEAST : 5- 9: mlsr Vakr-A fsstv MDHM_YEAST : 20- 25: anpyk VtvlgA gggig MDHM_YEAST : 91- 95: kdtdm Vlip-A gvprk MDHM_YEAST : 116- 120: inasi Vrdl-A aatae MDHM_YEAST : 116- 121: inasi VrdlaA ataes MDHM_YEAST : 143- 147: pvnst Vpiv-A qvlkn MDHM_YEAST : 328- 332: niekg Vnfv-A sk MDHP_YEAST : 3- 8: vk VailgA sggvg MDHP_YEAST : 26- 30: klspy Vsel-A lydir MDHP_YEAST : 70- 75: lsnaq VvlipA gvprk MDHP_YEAST : 71- 75: snaqv Vlip-A gvprk MDHP_YEAST : 103- 107: slvta Vgkf-A pnari MDH_ACTMI : 5- 10: aepn VtvtgA agqig MDH_ACTMI : 7- 11: epnvt Vtga-A gqigy MDH_CHLAU : 13- 18: igagf VgsttA hwlaa MDH_CHLTE : 11- 16: igagn VgattA frlae MDH_CHLVI : 11- 16: igagn VgattA friab MDH_ECOLI : 3- 8: mk VavlgA aggig MDH_ECOLI : 5- 9: mkva Vlga-A ggigq MDH_ECOLI : 38- 43: ydiap VtpgvA vdlsh MDH_ECOLI : 72- 77: legad VvlisA gvark MDH_ECOLI : 73- 77: egadv Vlis-A gvark MDH_ECOLI : 102- 106: ivknl Vqqv-A ktcpk MDH_ECOLI : 121- 126: iitnp VnttvA iaaev MDH_ECOLI : 125- 129: pvntt Vaia-A evlkk MDH_ECOLI : 131- 135: aiaae Vlkk-A gvydk MDH_ECOLI : 213- 218: nagte VveakA gggsa MDH_ECOLI : 214- 218: agtev Veak-A gggsa MDH_ECOLI : 248- 252: qgeqg Vvec-A yvegd MDH_HAEIN : 3- 8: mk VavlgA aggig MDH_HAEIN : 5- 9: mkva Vlga-A ggigq MDH_HAEIN : 38- 43: ydiap VtpgvA vdvsh MDH_HAEIN : 72- 77: legad VvlisA gvark MDH_HAEIN : 73- 77: egadv Vlis-A gvark MDH_HAEIN : 107- 112: iekva VtcpkA cvgii MDH_HAEIN : 121- 126: iitnp VnttvA iaaev MDH_HAEIN : 125- 129: pvntt Vaia-A evlkk MDH_HAEIN : 131- 135: aiaae Vlkk-A gvydk MDH_HAEIN : 213- 218: nagte VlnakA gggsa MDH_HELGE : 13- 17: igagn Vgat-A axxaa MDH_HELGE : 13- 18: igagn VgataA xxaas MDH_KIBAR : 7- 12: rtpvn VtvtgA agqig MDH_KIBAR : 9- 13: pvnvt Vtga-A gqigy MDH_MICGL : 4- 9: tvk VtvtgA agqig MDH_MICGL : 6- 10: tvkvt Vtga-A gqigy MDH_NITAL : 3- 8: rk VavmgA aggig MDH_NITAL : 5- 9: rkva Vmga-A ggigq MDH_PHEIM : 7- 12: ktpir VavtgA agnig MDH_PHEIM : 9- 13: pirva Vtga-A gnigy MDH_PHOS9 : 3- 8: mk VavigA aggig MDH_PHOS9 : 5- 9: mkva Viga-A ggigq MDH_PHOS9 : 38- 43: ydiap VtpgvA adlsh MDH_PHOS9 : 61- 66: kgygg VdptpA legad MDH_PHOS9 : 72- 77: legad VvlisA gvark MDH_PHOS9 : 73- 77: egadv Vlis-A gvark MDH_PHOS9 : 107- 112: aekia VvcpkA cvgii MDH_PHOS9 : 108- 112: ekiav Vcpk-A cvgii MDH_PHOS9 : 121- 126: iitnp VnttvA iaadv MDH_PHOS9 : 125- 129: pvntt Vaia-A dvlkk MDH_PHOS9 : 131- 135: aiaad Vlkk-A gvydk MDH_PLAVE : 7- 12: qtpvk VtvtgA agqig MDH_PLAVE : 9- 13: pvkvt Vtga-A gqigy MDH_SALTY : 3- 7: mk Vavl-A aaggi MDH_SALTY : 3- 8: mk VavlaA aggig MDH_SALTY : 5- 9: mkva Vlaa-A ggigq MDH_SALTY : 38- 43: ydiap VtpgvA vdlsh MDH_SALTY : 72- 77: legad VvlisA gvark MDH_SALTY : 73- 77: egadv Vlis-A gvark MDH_SALTY : 102- 106: ivknl Vqqi-A ktcpk MDH_SALTY : 121- 126: iitnp VnttvA iaaev MDH_SALTY : 125- 129: pvntt Vaia-A evlkk MDH_SALTY : 131- 135: aiaae Vlkk-A gvydk MDH_SALTY : 213- 218: nagte VveakA gggsa MDH_SALTY : 214- 218: agtev Veak-A gggsa MDH_SALTY : 236- 241: aarfg VslvrA lqgek MDH_SALTY : 248- 252: qgekg Vvec-A yvegd MDH_STRAR : 7- 12: rtpvn VtvtgA agqig MDH_STRAR : 9- 13: pvnvt Vtga-A gqigy MDH_STRRS : 7- 12: qtpvk VtvtgA agqig MDH_STRRS : 9- 13: pvkvt Vtga-A gqigy MDH_THEAL : 7- 11: silpl Vham-A nvrgd MDH_THEFL : 7- 12: kapvr VavtgA agqig MDH_THEFL : 9- 13: pvrva Vtga-A gqigy MDH_THEFL : 76- 81: tddpk VafkdA dyall MDH_THEFL : 128- 133: dvkvl VvgnpA ntnal MDH_THEFL : 129- 133: vkvlv Vgnp-A ntnal MDH_THEFL : 200- 205: lfhae VdgrpA lelvd MDH_THEFL : 222- 227: vfipt VaqrgA aiiqa E 5: 7.3401 302( 42) A-x(0,2)-A Occurences: 302(42) MDHC_ECHGR : 12- 13: vlitg A--A gqiay MDHC_ECHGR : 97- 98: rkgyg A--A rdlls MDHC_ECHGR : 168- 169: aiyqv A--A kagvp MDHC_ECHGR : 168- 171: aiyqv AakA gvpnt MDHC_ECHGR : 169- 171: iyqva Ak-A gvpnt MDHC_ECHGR : 232- 233: vqnrg A--A viglr MDHC_ECHGR : 243- 244: rklss A--A saaka MDHC_ECHGR : 243- 246: rklss AasA akaiv MDHC_ECHGR : 244- 246: klssa As-A akaiv MDHC_ECHGR : 244- 247: klssa AsaA kaivd MDHC_ECHGR : 246- 247: ssaas A--A kaivd MDHC_ECHGR : 246- 249: ssaas AakA ivdqm MDHC_ECHGR : 247- 249: saasa Ak-A ivdqm MDHC_ECHGR : 327- 329: derev Al-A sfk MDHC_FLABI : 118- 119: vavsg A--A gmisn MDHC_FLABI : 154- 155: sersf A--A legva MDHC_FLABI : 187- 190: eifqd AewA lliga MDHC_FLABI : 221- 224: aeqgk AlnA vaspn MDHC_FLABI : 224- 226: gkaln Av-A spnvk MDHC_FLABI : 274- 277: akcql AlkA gvfyd MDHC_FLABI : 345- 346: wgrss A--A stavs MDHC_FLABI : 346- 349: grssa AstA vsivd MDHC_HUMAN : 11- 12: vlvtg A--A gqiay MDHC_HUMAN : 113- 114: fksqg A--A ldkya MDHC_HUMAN : 162- 164: ldhnr Ak-A qialk MDHC_HUMAN : 164- 167: hnrak AqiA lklgv MDHC_HUMAN : 231- 232: vqqrs A--A vikar MDHC_HUMAN : 242- 245: rklss AmsA akaic MDHC_HUMAN : 245- 246: ssams A--A kaicd MDHC_HUMAN : 245- 248: ssams AakA icdhv MDHC_HUMAN : 246- 248: samsa Ak-A icdhv MDHC_MAIZE : 33- 36: rrprr AplA tvrcs MDHC_MAIZE : 53- 55: aqdgv At-A vatea MDHC_MAIZE : 55- 57: dgvat Av-A teapa MDHC_MAIZE : 57- 60: vatav AteA pasrk MDHC_MAIZE : 60- 62: avate Ap-A srkec MDHC_MAIZE : 97- 98: vavsg A--A gmisn MDHC_MAIZE : 184- 185: pgmer A--A lldin MDHC_MAIZE : 200- 203: adqgk AlnA vasrn MDHC_MAIZE : 203- 205: gkaln Av-A srnde MDHC_MAIZE : 253- 256: akcql AlkA gvfyd MDHC_MAIZE : 324- 325: wgrss A--A stavs MDHC_MAIZE : 325- 328: grssa AstA vsivd MDHC_MESCR : 2- 4: m Av-A elsps MDHC_MESCR : 60- 63: pnqvq ApvA vpaeg MDHC_MESCR : 63- 66: vqapv AvpA egqtg MDHC_MESCR : 105- 106: iavsg A--A gmisn MDHC_MESCR : 174- 177: difqd AewA lliga MDHC_MESCR : 208- 211: aeqgk AlnA vasrn MDHC_MESCR : 211- 213: gkaln Av-A srnvk MDHC_MESCR : 261- 264: akcql AlkA gvfyd MDHC_MESCR : 332- 333: wgrss A--A stavs MDHC_MESCR : 333- 336: grssa AstA vsiad MDHC_MESCR : 340- 342: tavsi Ad-A ikslv MDHC_MOUSE : 11- 12: vlvtg A--A gqiay MDHC_MOUSE : 231- 232: vqqrg A--A vikar MDHC_MOUSE : 242- 245: rklss AmsA akaia MDHC_MOUSE : 245- 246: ssams A--A kaiad MDHC_MOUSE : 245- 248: ssams AakA iadhi MDHC_MOUSE : 246- 248: samsa Ak-A iadhi MDHC_MOUSE : 248- 250: msaak Ai-A dhird MDHC_PEA : 64- 65: qvqvp A--A qtqdp MDHC_PEA : 106- 107: iavsg A--A gmisn MDHC_PEA : 175- 178: evfqd AewA lliga MDHC_PEA : 193- 194: pgver A--A lldin MDHC_PEA : 209- 212: aeqgk AlnA vasrn MDHC_PEA : 212- 214: gkaln Av-A srnak MDHC_PEA : 262- 265: akcql AlkA gvfyd MDHC_PEA : 333- 334: wgrss A--A stsvs MDHC_PIG : 11- 12: vlvtg A--A gqiay MDHC_PIG : 113- 114: fkcqg A--A ldkya MDHC_PIG : 162- 164: ldhnr Ak-A qialk MDHC_PIG : 164- 167: hnrak AqiA lklgv MDHC_PIG : 231- 232: vqqrg A--A vikar MDHC_PIG : 242- 245: rklss AmsA akaic MDHC_PIG : 245- 246: ssams A--A kaicd MDHC_PIG : 245- 248: ssams AakA icdhv MDHC_PIG : 246- 248: samsa Ak-A icdhv MDHC_SORBI : 15- 17: vgshl Ap-A plghr MDHC_SORBI : 33- 36: hrprr AllA tvrcs MDHC_SORBI : 44- 45: rcsvd A--A kqvqd MDHC_SORBI : 53- 55: vqdgv At-A eapat MDHC_SORBI : 55- 57: dgvat Ae-A patrk MDHC_SORBI : 57- 59: vatae Ap-A trkdc MDHC_SORBI : 94- 95: iavsg A--A gmisn MDHC_SORBI : 181- 182: pgmer A--A lldin MDHC_SORBI : 197- 200: adqgk AlnA vaskn MDHC_SORBI : 200- 202: gkaln Av-A sknvk MDHC_SORBI : 250- 253: akcql AlkA gvfyd MDHC_SORBI : 321- 322: wgrss A--A stavs MDHC_SORBI : 322- 325: grssa AstA vsiad MDHC_SORBI : 329- 331: tavsi Ad-A ikslv MDHC_SORVU : 15- 17: vgshl Ap-A plghr MDHC_SORVU : 33- 36: hrprr AllA tvrcs MDHC_SORVU : 44- 45: rcsvd A--A kqvqd MDHC_SORVU : 53- 55: vqdgv At-A eapat MDHC_SORVU : 55- 57: dgvat Ae-A patrk MDHC_SORVU : 57- 59: vatae Ap-A trkdc MDHC_SORVU : 94- 95: iavsg A--A gmisn MDHC_SORVU : 181- 182: pgmer A--A lldin MDHC_SORVU : 197- 200: adqgk AlnA vaskn MDHC_SORVU : 200- 202: gkaln Av-A sknvk MDHC_SORVU : 250- 253: akcql AlkA gvfyd MDHC_SORVU : 321- 322: wgrss A--A stavs MDHC_SORVU : 322- 325: grssa AstA vsiad MDHC_SORVU : 329- 331: tavsi Ad-A ikslv MDHC_YEAST : 20- 21: iailg A--A ggigq MDHC_YEAST : 266- 268: atlsm Ah-A gykcv MDHC_YEAST : 304- 307: nnfpi ApgA dqllp MDHD_SORVU : 17- 20: sglvp AplA raarr MDHD_SORVU : 20- 22: vpapl Ar-A arrrs MDHD_SORVU : 20- 23: vpapl AraA rrrsv MDHD_SORVU : 22- 23: aplar A--A rrrsv MDHD_SORVU : 45- 46: csvvd A--A kqvqd MDHD_SORVU : 54- 56: vqdgv At-A vggga MDHD_SORVU : 61- 62: avggg A--A sgnec MDHD_SORVU : 97- 98: iavsg A--A gmisn MDHD_SORVU : 184- 185: pgmer A--A lldin MDHD_SORVU : 200- 203: adqgk AlnA vasrn MDHD_SORVU : 203- 205: gkaln Av-A srnvk MDHD_SORVU : 253- 256: akcqi AlkA gvfyd MDHD_SORVU : 324- 325: wgrss A--A stavs MDHD_SORVU : 325- 328: grssa AstA vsivd MDHG_CITVU : 52- 53: vailg A--A ggigq MDHG_CITVU : 108- 109: qqqle A--A ltgmd MDHG_CITVU : 171- 172: stvpi A--A evfkk MDHG_CITVU : 260- 262: tevve Ak-A gagsa MDHG_CITVU : 262- 264: vveak Ag-A gsatl MDHG_CITVU : 264- 267: eakag AgsA tlsma MDHG_CITVU : 272- 274: atlsm Ay-A avkfa MDHG_CITVU : 272- 275: atlsm AyaA vkfad MDHG_CITVU : 274- 275: lsmay A--A vkfad MDHG_CITVU : 279- 281: aavkf Ad-A clrgl MDHG_CUCSA : 52- 53: vailg A--A ggigq MDHG_CUCSA : 171- 172: stvpi A--A evfkk MDHG_CUCSA : 260- 262: tevve Ak-A gagsa MDHG_CUCSA : 262- 264: vveak Ag-A gsatl MDHG_CUCSA : 264- 267: eakag AgsA tlsma MDHG_CUCSA : 272- 274: atlsm Ay-A avkfa MDHG_CUCSA : 272- 275: atlsm AyaA vkfad MDHG_CUCSA : 274- 275: lsmay A--A vkfad MDHG_CUCSA : 279- 281: aavkf Ad-A clrgl MDHG_SOYBN : 46- 47: vailg A--A ggigq MDHG_SOYBN : 141- 143: ktlce Ai-A kccpk MDHG_SOYBN : 165- 166: stvpi A--A evfkr MDHG_SOYBN : 254- 256: pevve Ak-A gagsa MDHG_SOYBN : 256- 258: vveak Ag-A gsatl MDHG_SOYBN : 258- 261: eakag AgsA tlsma MDHG_SOYBN : 266- 268: atlsm Ay-A avkfa MDHG_SOYBN : 266- 269: atlsm AyaA vkfad MDHG_SOYBN : 268- 269: lsmay A--A vkfad MDHG_SOYBN : 273- 275: aavkf Ad-A clhal MDHG_SOYBN : 290- 293: giiec AyvA sqvte MDHG_SOYBN : 338- 339: akkel A--A siekg MDHM_CITVU : 42- 43: vavlg A--A ggigq MDHM_CITVU : 75- 76: gtpgv A--A dvghv MDHM_CITVU : 137- 139: kslct Ai-A kycpn MDHM_CITVU : 161- 162: stvpi A--A evfkk MDHM_CITVU : 192- 195: aktfy AgkA nvpva MDHM_CITVU : 250- 252: tevve Ak-A gkgsa MDHM_CITVU : 262- 264: atlsm Ay-A galfa MDHM_CITVU : 264- 266: lsmay Ag-A lfada MDHM_CITVU : 266- 269: mayag AlfA daclk MDHM_CITVU : 269- 271: agalf Ad-A clkgl MDHM_CITVU : 344- 346: kgiqf An-A n MDHM_EUCGU : 16- 17: srsss A--A prphl MDHM_EUCGU : 42- 43: vavlg A--A ggigq MDHM_EUCGU : 75- 76: gtpgv A--A dvghi MDHM_EUCGU : 137- 139: kslct Ai-A kycpn MDHM_EUCGU : 161- 162: stvpi A--A eifkk MDHM_EUCGU : 192- 195: aktfy AgkA kvpve MDHM_EUCGU : 226- 229: qavpk AnlA dedik MDHM_EUCGU : 250- 252: tevve Ak-A gkgsa MDHM_EUCGU : 262- 264: atlsm Ay-A galfa MDHM_EUCGU : 264- 266: lsmay Ag-A lfada MDHM_EUCGU : 266- 269: mayag AlfA daclk MDHM_EUCGU : 269- 271: agalf Ad-A clkgl MDHM_HUMAN : 4- 6: mls Al-A rpvsa MDHM_HUMAN : 11- 12: arpvs A--A lrrsf MDHM_HUMAN : 25- 28: saqnn AkvA vlgas MDHM_HUMAN : 65- 66: htpgv A--A dlshi MDHM_HUMAN : 75- 76: hietk A--A vkgyl MDHM_MOUSE : 4- 6: mls Al-A rpaga MDHM_MOUSE : 6- 9: mlsal ArpA gaalr MDHM_MOUSE : 9- 11: alarp Ag-A alrrs MDHM_MOUSE : 9- 12: alarp AgaA lrrsf MDHM_MOUSE : 11- 12: arpag A--A lrrsf MDHM_MOUSE : 25- 28: saqnn AkvA vlgas MDHM_MOUSE : 65- 66: htpgv A--A dlshi MDHM_MOUSE : 126- 127: vatlt A--A caqhc MDHM_MOUSE : 126- 129: vatlt AacA qhcpe MDHM_MOUSE : 127- 129: atlta Ac-A qhcpe MDHM_MOUSE : 240- 242: tevvk Ak-A gagsa MDHM_MOUSE : 242- 244: vvkak Ag-A gsatl MDHM_MOUSE : 244- 247: kakag AgsA tlsma MDHM_MOUSE : 252- 254: atlsm Ay-A garfv MDHM_MOUSE : 254- 256: lsmay Ag-A rfvfs MDHM_MOUSE : 317- 319: eekmi Ae-A ipelk MDHM_PIG : 1- 4: AkvA vlgas MDHM_PIG : 41- 42: htpgv A--A dlshi MDHM_PIG : 102- 103: vatlt A--A caqhc MDHM_PIG : 102- 105: vatlt AacA qhcpd MDHM_PIG : 103- 105: atlta Ac-A qhcpd MDHM_PIG : 153- 155: ldivr An-A fvael MDHM_PIG : 155- 158: ivran AfvA elkgl MDHM_PIG : 216- 218: tevvk Ak-A gagsa MDHM_PIG : 218- 220: vvkak Ag-A gsatl MDHM_PIG : 220- 223: kakag AgsA tlsma MDHM_PIG : 228- 230: atlsm Ay-A garfv MDHM_PIG : 230- 232: lsmay Ag-A rfvfs MDHM_PIG : 293- 295: eekmi Ae-A ipelk MDHM_RAT : 4- 6: mls Al-A rpvga MDHM_RAT : 11- 12: arpvg A--A lrrsf MDHM_RAT : 25- 28: saqnn AkvA vlgas MDHM_RAT : 65- 66: htpgv A--A dlshi MDHM_RAT : 126- 127: vatlt A--A caqhc MDHM_RAT : 126- 129: vatlt AacA qhcpe MDHM_RAT : 127- 129: atlta Ac-A qhcpe MDHM_RAT : 240- 242: tevvk Ak-A gagsa MDHM_RAT : 242- 244: vvkak Ag-A gsatl MDHM_RAT : 244- 247: kakag AgsA tlsma MDHM_RAT : 252- 254: atlsm Ay-A garfv MDHM_RAT : 254- 256: lsmay Ag-A rfvfs MDHM_RAT : 317- 319: eekmi Ae-A ipelk MDHM_SCHMA : 34- 35: hvkgv A--A dlshi MDHM_SCHMA : 120- 121: stvpi A--A eilkr MDHM_YEAST : 6- 9: mlsrv AkrA fsstv MDHM_YEAST : 110- 113: rddlf AinA sivrd MDHM_YEAST : 120- 121: ivrdl A--A ataes MDHM_YEAST : 120- 122: ivrdl Aa-A taesa MDHM_YEAST : 121- 122: vrdla A--A taesa MDHM_YEAST : 121- 124: vrdla AatA esapn MDHM_YEAST : 122- 124: rdlaa At-A esapn MDHM_YEAST : 124- 127: laaat AesA pnaai MDHM_YEAST : 127- 130: ataes ApnA ailvi MDHM_YEAST : 130- 131: esapn A--A ilvis MDHM_YEAST : 172- 173: ldsir A--A rfise MDHM_YEAST : 238- 241: kakng AgsA tlsma MDHM_YEAST : 246- 248: atlsm Ah-A gakfa MDHM_YEAST : 248- 250: lsmah Ag-A kfana MDHM_YEAST : 250- 253: mahag AkfA navls MDHM_YEAST : 253- 255: agakf An-A vlsgf MDHP_YEAST : 36- 37: lydir A--A egigk MDHP_YEAST : 107- 110: avgkf ApnA rilvi MDHP_YEAST : 229- 232: kakqg AgsA tlsma MDHP_YEAST : 241- 244: mafrg AkfA eevlr MDH_ACTMI : 10- 11: vtvtg A--A gqigy MDH_CHLAU : 22- 23: tahwl A--A kelgd MDH_CHLTE : 13- 16: agnvg AttA frlae MDH_CHLVI : 13- 16: agnvg AttA friab MDH_ECOLI : 8- 9: vavlg A--A ggigq MDH_ECOLI : 15- 17: ggigq Al-A lllkt MDH_ECOLI : 63- 66: fsged AtpA legad MDH_ECOLI : 77- 80: vvlis AgvA rkpgm MDH_ECOLI : 126- 128: vnttv Ai-A aevlk MDH_ECOLI : 126- 129: vnttv AiaA evlkk MDH_ECOLI : 128- 129: ttvai A--A evlkk MDH_ECOLI : 216- 218: tevve Ak-A gggsa MDH_ECOLI : 230- 231: lsmgq A--A arfgl MDH_ECOLI : 230- 232: lsmgq Aa-A rfgls MDH_ECOLI : 231- 232: smgqa A--A rfgls MDH_HAEIN : 8- 9: vavlg A--A ggigq MDH_HAEIN : 15- 17: ggigq Al-A lllkl MDH_HAEIN : 77- 80: vvlis AgvA rkpgm MDH_HAEIN : 126- 128: vnttv Ai-A aevlk MDH_HAEIN : 126- 129: vnttv AiaA evlkk MDH_HAEIN : 128- 129: ttvai A--A evlkk MDH_HAEIN : 216- 218: tevln Ak-A gggsa MDH_HAEIN : 228- 230: atlsm Aq-A aarfa MDH_HAEIN : 228- 231: atlsm AqaA arfar MDH_HAEIN : 230- 231: lsmaq A--A arfar MDH_HAEIN : 230- 232: lsmaq Aa-A rfars MDH_HAEIN : 231- 232: smaqa A--A rfars MDH_HAEIN : 232- 235: maqaa ArfA rslvk MDH_HELGE : 15- 17: agnvg At-A axxaa MDH_HELGE : 15- 18: agnvg AtaA xxaas MDH_HELGE : 17- 18: nvgat A--A xxaas MDH_HELGE : 18- 21: vgata AxxA askdl MDH_HELGE : 21- 22: taaxx A--A skdlg MDH_KIBAR : 12- 13: vtvtg A--A gqigy MDH_MICGL : 9- 10: vtvtg A--A gqigy MDH_NITAL : 8- 9: vavmg A--A ggigq MDH_PHEIM : 12- 13: vavtg A--A gnigy MDH_PHOS9 : 8- 9: vavig A--A ggigq MDH_PHOS9 : 15- 17: ggigq Al-A lllkn MDH_PHOS9 : 43- 44: vtpgv A--A dlshi MDH_PHOS9 : 77- 80: vvlis AgvA rkpgm MDH_PHOS9 : 126- 128: vnttv Ai-A advlk MDH_PHOS9 : 126- 129: vnttv AiaA dvlkk MDH_PHOS9 : 128- 129: ttvai A--A dvlkk MDH_PHOS9 : 230- 231: lsmgq A--A yrfgl MDH_PHOS9 : 310- 311: lgeef A--A k MDH_PLAVE : 12- 13: vtvtg A--A gqigy MDH_SALTY : 4- 7: mkv AvlA aaggi MDH_SALTY : 7- 8: kvavl A--A aggig MDH_SALTY : 7- 9: kvavl Aa-A ggigq MDH_SALTY : 8- 9: vavla A--A ggigq MDH_SALTY : 15- 17: ggigq Al-A lllkn MDH_SALTY : 63- 66: fsged AtpA legad MDH_SALTY : 77- 80: vvlis AgvA rkpgm MDH_SALTY : 126- 128: vnttv Ai-A aevlk MDH_SALTY : 126- 129: vnttv AiaA evlkk MDH_SALTY : 128- 129: ttvai A--A evlkk MDH_SALTY : 199- 200: fteqe A--A eltkr MDH_SALTY : 216- 218: tevve Ak-A gggsa MDH_SALTY : 230- 231: lsmgq A--A arfgv MDH_SALTY : 230- 232: lsmgq Aa-A rfgvs MDH_SALTY : 231- 232: smgqa A--A rfgvs MDH_STRAR : 12- 13: vtvtg A--A gqigy MDH_STRRS : 12- 13: vtvtg A--A gqigy MDH_THEAL : 9- 11: lplvh Am-A nvrgd MDH_THEFL : 12- 13: vavtg A--A gqigy MDH_THEFL : 25- 26: llfri A--A gemlg MDH_THEFL : 46- 49: leipq AmkA legvv MDH_THEFL : 81- 84: vafkd AdyA llvga MDH_THEFL : 89- 90: allvg A--A prkag MDH_THEFL : 115- 117: teqgr Al-A evakk MDH_THEFL : 117- 120: qgral AevA kkdvk MDH_THEFL : 137- 140: pantn AliA yknap MDH_THEFL : 163- 165: ldhnr Ak-A qlakk MDH_THEFL : 165- 168: hnrak AqlA kktgt MDH_THEFL : 227- 228: vaqrg A--A iiqar MDH_THEFL : 232- 235: aaiiq ArgA ssaas MDH_THEFL : 235- 238: iqarg AssA asaan MDH_THEFL : 238- 239: rgass A--A saana MDH_THEFL : 238- 241: rgass AasA anaai MDH_THEFL : 239- 241: gassa As-A anaai MDH_THEFL : 239- 242: gassa AsaA naaie MDH_THEFL : 241- 242: ssaas A--A naaie MDH_THEFL : 241- 244: ssaas AanA aiehi MDH_THEFL : 242- 244: saasa An-A aiehi MDH_THEFL : 242- 245: saasa AnaA iehir MDH_THEFL : 244- 245: asaan A--A iehir Number of patterns evaluated by Pratt:9 Total running time: 1 seconds