------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 3 sequences from file MAP1B_NEURAXIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 3 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename MAP1B_NEURAXIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: MAPB_HUMAN 2468 MAPB_MOUSE 2464 NERX_RAT 863 Pratt run started at Thu Feb 6 20:14:41 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 208.5024 3( 3) T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I-E-L 2: 208.5024 3( 3) V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I-E 3: 208.5024 3( 3) Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I 4: 208.5024 3( 3) M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K 5: 208.5024 3( 3) N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C 6: 208.5024 3( 3) S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A 7: 208.5024 3( 3) G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P 8: 208.5024 3( 3) W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F 9: 208.5024 3( 3) Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S 10: 208.5024 3( 3) A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E 11: 208.5024 3( 3) K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D 12: 208.5024 3( 3) G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q 13: 208.5024 3( 3) E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M 14: 208.5024 3( 3) L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V 15: 208.5024 3( 3) L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V 16: 208.5024 3( 3) A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T 17: 208.5024 3( 3) D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S 18: 208.5024 3( 3) L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S 19: 208.5024 3( 3) V-L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S 20: 208.5024 3( 3) A-V-L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A Warning: upper limit on pattern length (components) reached -- to check if longer patterns may be conserved. -- rerun Pratt with increased C and L values Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 208.5024 3( 3) T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I-E-L B 2: 208.5024 3( 3) V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I-E C 3: 208.5024 3( 3) Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I D 4: 208.5024 3( 3) M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K E 5: 208.5024 3( 3) N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C F 6: 208.5024 3( 3) S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A G 7: 208.5024 3( 3) G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P H 8: 208.5024 3( 3) W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F I 9: 208.5024 3( 3) Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S J 10: 208.5024 3( 3) A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E K 11: 208.5024 3( 3) K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D L 12: 208.5024 3( 3) G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q M 13: 208.5024 3( 3) E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M N 14: 208.5024 3( 3) L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V O 15: 208.5024 3( 3) L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V P 16: 208.5024 3( 3) A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T Q 17: 208.5024 3( 3) D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S R 18: 208.5024 3( 3) L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S S 19: 208.5024 3( 3) V-L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S T 20: 208.5024 3( 3) A-V-L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A Best patterns with alignements: fitness hits(seqs) Pattern A 1: 208.5024 3( 3) T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I-E-L Occurences: 3(3) MAPB_HUMAN : 2419- 2468: snmqv TLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKIEL MAPB_MOUSE : 2415- 2464: snmqv TLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKIEL NERX_RAT : 814- 863: snmqv TLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKIEL B 2: 208.5024 3( 3) V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I-E Occurences: 3(3) MAPB_HUMAN : 2418- 2467: gsnmq VTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKIE l MAPB_MOUSE : 2414- 2463: gsnmq VTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKIE l NERX_RAT : 813- 862: gsnmq VTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKIE l C 3: 208.5024 3( 3) Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K-I Occurences: 3(3) MAPB_HUMAN : 2417- 2466: wgsnm QVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKI el MAPB_MOUSE : 2413- 2462: wgsnm QVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKI el NERX_RAT : 812- 861: wgsnm QVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACKI el D 4: 208.5024 3( 3) M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C-K Occurences: 3(3) MAPB_HUMAN : 2416- 2465: qwgsn MQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACK iel MAPB_MOUSE : 2412- 2461: qwgsn MQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACK iel NERX_RAT : 811- 860: qwgsn MQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPACK iel E 5: 208.5024 3( 3) N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A-C Occurences: 3(3) MAPB_HUMAN : 2415- 2464: aqwgs NMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPAC kiel MAPB_MOUSE : 2411- 2460: aqwgs NMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPAC kiel NERX_RAT : 810- 859: aqwgs NMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPAC kiel F 6: 208.5024 3( 3) S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P-A Occurences: 3(3) MAPB_HUMAN : 2414- 2463: kaqwg SNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPA ckiel MAPB_MOUSE : 2410- 2459: kaqwg SNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPA ckiel NERX_RAT : 809- 858: kaqwg SNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFPA ckiel G 7: 208.5024 3( 3) G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F-P Occurences: 3(3) MAPB_HUMAN : 2413- 2462: gkaqw GSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFP ackie MAPB_MOUSE : 2409- 2458: gkaqw GSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFP ackie NERX_RAT : 808- 857: gkaqw GSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESFP ackie H 8: 208.5024 3( 3) W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S-F Occurences: 3(3) MAPB_HUMAN : 2412- 2461: egkaq WGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESF packi MAPB_MOUSE : 2408- 2457: egkaq WGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESF packi NERX_RAT : 807- 856: egkaq WGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDESF packi I 9: 208.5024 3( 3) Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E-S Occurences: 3(3) MAPB_HUMAN : 2411- 2460: legka QWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDES fpack MAPB_MOUSE : 2407- 2456: legka QWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDES fpack NERX_RAT : 806- 855: legka QWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDES fpack J 10: 208.5024 3( 3) A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D-E Occurences: 3(3) MAPB_HUMAN : 2410- 2459: llegk AQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDE sfpac MAPB_MOUSE : 2406- 2455: llegk AQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDE sfpac NERX_RAT : 805- 854: llegk AQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQDE sfpac K 11: 208.5024 3( 3) K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q-D Occurences: 3(3) MAPB_HUMAN : 2409- 2458: alleg KAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQD esfpa MAPB_MOUSE : 2405- 2454: alleg KAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQD esfpa NERX_RAT : 804- 853: alleg KAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQD esfpa L 12: 208.5024 3( 3) G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M-Q Occurences: 3(3) MAPB_HUMAN : 2408- 2457: dalle GKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQ desfp MAPB_MOUSE : 2404- 2453: dalle GKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQ desfp NERX_RAT : 803- 852: dalle GKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVMQ desfp M 13: 208.5024 3( 3) E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V-M Occurences: 3(3) MAPB_HUMAN : 2407- 2456: ldall EGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVM qdesf MAPB_MOUSE : 2403- 2452: ldall EGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVM qdesf NERX_RAT : 802- 851: ldall EGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVVM qdesf N 14: 208.5024 3( 3) L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V-V Occurences: 3(3) MAPB_HUMAN : 2406- 2455: vldal LEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVV mqdes MAPB_MOUSE : 2402- 2451: vldal LEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVV mqdes NERX_RAT : 801- 850: vldal LEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTVV mqdes O 15: 208.5024 3( 3) L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T-V Occurences: 3(3) MAPB_HUMAN : 2405- 2454: avlda LLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTV vmqde MAPB_MOUSE : 2401- 2450: avlda LLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTV vmqde NERX_RAT : 800- 849: avlda LLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSSTV vmqde P 16: 208.5024 3( 3) A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S-T Occurences: 3(3) MAPB_HUMAN : 2404- 2453: ravld ALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSST vvmqd MAPB_MOUSE : 2400- 2449: ravld ALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSST vvmqd NERX_RAT : 799- 848: ravld ALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSST vvmqd Q 17: 208.5024 3( 3) D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S-S Occurences: 3(3) MAPB_HUMAN : 2403- 2452: sravl DALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSS tvvmq MAPB_MOUSE : 2399- 2448: sravl DALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSS tvvmq NERX_RAT : 798- 847: sravl DALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASSS tvvmq R 18: 208.5024 3( 3) L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S-S Occurences: 3(3) MAPB_HUMAN : 2402- 2451: psrav LDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASS stvvm MAPB_MOUSE : 2398- 2447: psrav LDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASS stvvm NERX_RAT : 797- 846: psrav LDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLASS stvvm S 19: 208.5024 3( 3) V-L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A-S Occurences: 3(3) MAPB_HUMAN : 2401- 2450: epsra VLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLAS sstvv MAPB_MOUSE : 2397- 2446: epsra VLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLAS sstvv NERX_RAT : 796- 845: epsra VLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLAS sstvv T 20: 208.5024 3( 3) A-V-L-D-A-L-L-E-G-K-A-Q-W-G-S-N-M-Q-V-T-L-I-P-T-H-D-S-E-V-M-R-E-W-Y-Q-E-T-H-E-K-Q-Q-D-L-N-I-M-V-L-A Occurences: 3(3) MAPB_HUMAN : 2400- 2449: eepsr AVLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLA ssstv MAPB_MOUSE : 2396- 2445: eepsr AVLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLA ssstv NERX_RAT : 795- 844: eepsr AVLDALLEGKAQWGSNMQVTLIPTHDSEVMREWYQETHEKQQDLNIMVLA ssstv Number of patterns evaluated by Pratt:620718 Total running time: 90 seconds