------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file MALATE_SYNTHASE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename MALATE_SYNTHASE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: MASY_BRANA 561 MASY_CANTR 551 MASY_CUCMA 566 MASY_CUCSA 568 MASY_ECOLI 533 MASY_EMENI 528 MASY_GOSHI 567 MASY_HANPO 555 MASY_NEUCR 542 MASY_RICCO 567 MASY_SOYBN 564 MASY_YEAST 554 MASZ_YEAST 554 Pratt run started at Thu Feb 6 20:12:28 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 45.8706 13( 13) V-x(2)-D-K-x(2)-E-x(3)-G-x-D-x(2)-W-x-A-H-P-x-L 2: 44.8706 13( 13) P-x(5)-E-D-A-A-T-A-E-x-S-R-x(3,5)-W 3: 41.7005 13( 13) D-K-x(2)-E-x(3)-G-x-D-x(2)-W-x-A-H-P-x-L 4: 41.7005 13( 13) H-x(2)-G-L-N-x-G-x-W-D-Y-x-F-x(3)-K 5: 40.7005 13( 13) E-D-A-A-T-A-E-x-S-R-x(3,5)-W 6: 37.5305 13( 13) D-A-A-T-A-E-x-S-R-x(5)-W 7: 37.5305 13( 13) K-x(2)-E-x(3)-G-x-D-x(2)-W-x-A-H-P-x-L 8: 37.5305 13( 13) G-L-N-x-G-x-W-D-Y-x-F-x(3)-K 9: 37.5305 13( 13) G-x(2)-P-x-F-Y-x-P-K-x(5)-E-x(3)-W-x(3)-F 10: 37.0305 18( 13) L-x(0,1)-P-x-R-x(2)-V-x-M-x(3)-F-x(3)-Y-x(3)-L-x(4)-H 11: 37.0305 13( 13) G-x(1,2)-P-x-F-Y-x-P-K-x(5)-E-x(3)-W-x(3)-F 12: 37.0305 13( 13) D-x(2,3)-P-x-W-x(5)-G-Q-x-N-L-x-D-A 13: 36.5305 13( 13) D-A-A-T-A-E-x-S-R-x(3,5)-W 14: 36.5305 18( 13) L-x(0,1)-P-x(0,1)-R-x(2)-V-x-M-x(3)-F-x(3)-Y-x(3)-L-x(4)-H 15: 36.5305 13( 13) P-x-W-x(0,1)-N-x(3,4)-G-Q-x-N-L-x-D-A 16: 36.5305 13( 13) D-x(2,3)-P-x(0,1)-W-x(5)-G-Q-x-N-L-x-D-A 17: 36.5305 13( 13) R-x(2)-E-x-T-G-P-x(4)-M-x(2)-N-x(2)-N-x(2,4)-V 18: 36.0305 21( 13) R-x(1,2)-E-x-T-G-P-x(4)-M-x(2)-N-x(2)-N-x(2,4)-V 19: 33.3604 13( 13) A-A-T-A-E-x-S-R-x(5)-W 20: 33.3604 13( 13) E-x(3)-G-x-D-x(2)-W-x-A-H-P-x-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 123.1609 13( 13) G-x(1,2)-P-[FY]-F-Y-[LP]-P-K-x-[EQ]-x(3)-E-[AV]-x(2)-W-[NS]-x-[AIV]-F-x(2)-[AS]-[EQ]-[DK]-x(2)-[EGN]-[ILM]-x(2)-[GS]-[ST]-I-[KR]-[AG]-[ST]-[LV]-L-I-E-T-[IL]-[PT]-[AI]-[ASV] B 2: 121.0638 13( 13) G-x(2)-P-[FY]-F-Y-[LP]-P-K-x-[EQ]-x(3)-E-[AV]-x(2)-W-[NS]-x-[AIV]-F-x(2)-[AS]-[EQ]-[DK]-x(2)-[EGN]-[ILM]-x(2)-[GS]-[ST]-I-[KR]-[AG]-[ST]-[LV]-L-I-E-T-[IL]-[PT]-[AI] C 3: 118.2995 13( 13) H-x-[ASV]-G-L-N-x-G-x-W-D-Y-[IM]-F-[PS]-x-[IV]-K-x-[FLV]-x(4)-[DENQ]-x-[ILPV]-L-P-[DN]-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV] D 4: 115.7024 13( 13) G-L-N-x-G-x-W-D-Y-[IM]-F-[PS]-x-[IV]-K-x-[FLV]-x(4)-[DENQ]-x-[ILPV]-L-P-[DN]-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV]-x(3)-H E 5: 92.6686 18( 13) L-x(0,1)-P-x(0,1)-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV]-x(3)-H-x(3)-[ACV]-[FH]-[AV]-x-G-x(2)-A-[AQ]-x-[IP]-[IP]-x-[DKR]-[DE]-x(4)-[DEN] F 6: 90.5784 18( 13) L-x(0,1)-P-x-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV]-x(3)-H-x(3)-[ACV]-[FH]-[AV]-x-G-x(2)-A-[AQ]-x-[IP]-[IP]-x-[DKR]-[DE] G 7: 69.2890 13( 13) V-x(2)-D-K-x(2)-E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F H 8: 65.1189 13( 13) D-K-x(2)-E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F I 9: 60.9489 13( 13) K-x(2)-E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F J 10: 57.7720 13( 13) P-[IL]-x(2)-[LP]-x-E-D-A-A-T-A-E-[IV]-S-R-x(3,5)-W-x(2)-[HY] K 11: 56.7788 13( 13) E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F L 12: 54.8207 13( 13) R-x(2)-E-[IM]-T-G-P-[PTV]-x(3)-M-[ILV]-[IV]-N-[AD]-[FL]-N-x(2,4)-V M 13: 54.3789 13( 13) D-x(2,3)-P-x-W-x(2)-[LMV]-[IMV]-x-G-Q-[IV]-N-L-x-D-A-[IV]-x(3)-[ILV]-[DST] N 14: 54.3207 21( 13) R-x(1,2)-E-[IM]-T-G-P-[PTV]-x(3)-M-[ILV]-[IV]-N-[AD]-[FL]-N-x(2,4)-V O 15: 53.8789 13( 13) D-x(2,3)-P-x(0,1)-W-x(2)-[LMV]-[IMV]-x-G-Q-[IV]-N-L-x-D-A-[IV]-x(3)-[ILV]-[DST] P 16: 53.7353 13( 13) D-A-A-T-A-E-[IV]-S-R-x-[QS]-x-[WY]-[QS]-W-x(2)-[HY] Q 17: 49.8893 13( 13) P-[ADGNST]-W-x(0,1)-N-x(3,4)-G-Q-[IV]-N-L-x-D-A-[IV]-x(3)-[ILV]-[DST] R 18: 49.5653 13( 13) A-A-T-A-E-[IV]-S-R-x-[QS]-x-[WY]-[QS]-W-x(2)-[HY] S 19: 47.0979 13( 13) E-D-A-A-T-A-E-[IV]-S-R-x(3,5)-W-x(2)-[HY] T 20: 42.9278 13( 13) D-A-A-T-A-E-[IV]-S-R-x(3,5)-W-x(2)-[HY] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 123.1609 13( 13) G-x(1,2)-P-[FY]-F-Y-[LP]-P-K-x-[EQ]-x(3)-E-[AV]-x(2)-W-[NS]-x-[AIV]-F-x(2)-[AS]-[EQ]-[DK]-x(2)-[EGN]-[ILM]-x(2)-[GS]-[ST]-I-[KR]-[AG]-[ST]-[LV]-L-I-E-T-[IL]-[PT]-[AI]-[ASV] Occurences: 13(13) MASY_BRANA : 220- 269: qtqgs GfgPFFYLPKmEhsrEAkiWNsVFerAEKmaGIerGSIRATVLIETLPAV fqmne MASY_CANTR : 214- 263: eaiaq GfgPYFYLPKmEhhlEAklWNdIFnySQDyiGLkrGTIRASVLIETIPAV fqmde MASY_CUCMA : 225- 274: rsqgq GsgPFFYLPKmEhsrEAkiWNsVFerAEKmaGIerGSIRATVLIETLPAV fqmde MASY_CUCSA : 226- 275: rsqgq GygPFFYLPKmEhsrEAkiWNsVFerAEKmaGIerGSIRATVLIETLPAV fqmne MASY_ECOLI : 206- 255: allak GsgPYFYLPKtQswqEAawWSeVFsyAEDrfNLprGTIKATLLIETLPAV fqmde MASY_EMENI : 197- 246: elvar GfgPYFYLPKmEshlEArlWNdVFnlAQDyiGMprGTIRGTVLIETITAA femee MASY_GOSHI : 225- 274: ntqgq GfgPFFYLPKmEnsrEAkiWNsVFekAEKmaGIekGSIRATVLIETLPAV fqmde MASY_HANPO : 219- 268: fllsq GlaPFFYLPKmEhykEAqlWNdIFcvAQDclEIprGTIKATVLIETLPIS yqlde MASY_NEUCR : 209- 258: elvqr GfgPYFYPPKmEshlEArlWNdAFnlAQDyvGIplSTIRGTVLIETITAA femde MASY_RICCO : 225- 274: rnqga GygPFFYLPKmEhsrEAkiWNcVFekAEKmaGIerGSIRATVLIETLPAV fqmne MASY_SOYBN : 222- 271: rtqga GfgPFFYLPKmEhsrEAkiWNnVFekAEKvaGIerGSIRATVLIETLPAV fqmne MASY_YEAST : 217- 266: elikl GkgPYFYLPKmEhhlEAklWNdVFcvAQDyiGIprGTIRATVLIETLPAA fqmee MASZ_YEAST : 217- 266: elvki GkgPYFYLPKmEhhmEVklWNdIFcvAQDfiGMprGTIRATVLIETLPAA fqmee B 2: 121.0638 13( 13) G-x(2)-P-[FY]-F-Y-[LP]-P-K-x-[EQ]-x(3)-E-[AV]-x(2)-W-[NS]-x-[AIV]-F-x(2)-[AS]-[EQ]-[DK]-x(2)-[EGN]-[ILM]-x(2)-[GS]-[ST]-I-[KR]-[AG]-[ST]-[LV]-L-I-E-T-[IL]-[PT]-[AI] Occurences: 13(13) MASY_BRANA : 220- 268: qtqgs GfgPFFYLPKmEhsrEAkiWNsVFerAEKmaGIerGSIRATVLIETLPA vfqmn MASY_CANTR : 214- 262: eaiaq GfgPYFYLPKmEhhlEAklWNdIFnySQDyiGLkrGTIRASVLIETIPA vfqmd MASY_CUCMA : 225- 273: rsqgq GsgPFFYLPKmEhsrEAkiWNsVFerAEKmaGIerGSIRATVLIETLPA vfqmd MASY_CUCSA : 226- 274: rsqgq GygPFFYLPKmEhsrEAkiWNsVFerAEKmaGIerGSIRATVLIETLPA vfqmn MASY_ECOLI : 206- 254: allak GsgPYFYLPKtQswqEAawWSeVFsyAEDrfNLprGTIKATLLIETLPA vfqmd MASY_EMENI : 197- 245: elvar GfgPYFYLPKmEshlEArlWNdVFnlAQDyiGMprGTIRGTVLIETITA afeme MASY_GOSHI : 225- 273: ntqgq GfgPFFYLPKmEnsrEAkiWNsVFekAEKmaGIekGSIRATVLIETLPA vfqmd MASY_HANPO : 219- 267: fllsq GlaPFFYLPKmEhykEAqlWNdIFcvAQDclEIprGTIKATVLIETLPI syqld MASY_NEUCR : 209- 257: elvqr GfgPYFYPPKmEshlEArlWNdAFnlAQDyvGIplSTIRGTVLIETITA afemd MASY_RICCO : 225- 273: rnqga GygPFFYLPKmEhsrEAkiWNcVFekAEKmaGIerGSIRATVLIETLPA vfqmn MASY_SOYBN : 222- 270: rtqga GfgPFFYLPKmEhsrEAkiWNnVFekAEKvaGIerGSIRATVLIETLPA vfqmn MASY_YEAST : 217- 265: elikl GkgPYFYLPKmEhhlEAklWNdVFcvAQDyiGIprGTIRATVLIETLPA afqme MASZ_YEAST : 217- 265: elvki GkgPYFYLPKmEhhmEVklWNdIFcvAQDfiGMprGTIRATVLIETLPA afqme C 3: 118.2995 13( 13) H-x-[ASV]-G-L-N-x-G-x-W-D-Y-[IM]-F-[PS]-x-[IV]-K-x-[FLV]-x(4)-[DENQ]-x-[ILPV]-L-P-[DN]-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV] Occurences: 13(13) MASY_BRANA : 282- 330: yelrd HsVGLNcGrWDYIFSyVKtFqahpDrLLPDRvlVGMGqhFMrSYSDlLI rtchk MASY_CANTR : 276- 324: yqlre HsAGLNcGrWDYIFSyIKcLrnhpDfILPDRsqVTMAapFMsSYVKlLV htthk MASY_CUCMA : 287- 335: yelrd HsVGLNcGrWDYIFSyVKtFqahlDrLLPDRvqVGMAqhFMrSYSDlLI rtcht MASY_CUCSA : 288- 336: yelrd HsVGLNcGrWDYIFSyVKtFqahpDrLLPDRvlVGMTqhFMrSYSDlLI rtchr MASY_ECOLI : 268- 316: halrd HiVGLNcGrWDYIFSyIKtLknypDrVLPDRqaVTMDkpFLnAYSRlLI ktchk MASY_EMENI : 259- 307: yelrd HsSGLNcGrWDYIFSfIKkFrqhpNfVLPDRsdVTMTvpFMdAYVKlLI ktchk MASY_GOSHI : 287- 335: yelrd HsVGLNcGrWDYIFSyVKtFqghpDrLLPDRgqVGMTqhFMrSYSDlLI rtchr MASY_HANPO : 281- 329: yalrd HsAGLNcGrWDYMFStIKrLrnqkQhILPDRhqVTMTvpFMtNYVKqLI kichk MASY_NEUCR : 271- 319: felrn HtSGLNrGgWDYIFPfIKeVrrfpNfVLPDRsdVTMTvpFMeAYVKlLI ktlhr MASY_RICCO : 287- 335: yelrd HsVGLNcGrWDYIFSyVKtFqahpDrPLPDRvqVGMTqhFMkSYSDlLV wtchr MASY_SOYBN : 284- 332: yelkd HsVGLNcGrWDYIFSyVKtFqahpDrLLPDRvlVGMTqhFMkSYSDlLI rtchr MASY_YEAST : 279- 327: yqlrq HsSGLNcGrWDYIFStIKrLrndpNhILPNRnqVTMTspFMdAYVKrLI ntchr MASZ_YEAST : 279- 327: yqire HsSGLNcGrWDYIFStIKkLrnlnEhVLPNRdlVTMTspFMdAYVKrLI ntchr D 4: 115.7024 13( 13) G-L-N-x-G-x-W-D-Y-[IM]-F-[PS]-x-[IV]-K-x-[FLV]-x(4)-[DENQ]-x-[ILPV]-L-P-[DN]-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV]-x(3)-H Occurences: 13(13) MASY_BRANA : 285- 334: rdhsv GLNcGrWDYIFSyVKtFqahpDrLLPDRvlVGMGqhFMrSYSDlLIrtcH krgvh MASY_CANTR : 279- 328: rehsa GLNcGrWDYIFSyIKcLrnhpDfILPDRsqVTMAapFMsSYVKlLVhttH krkvh MASY_CUCMA : 290- 339: rdhsv GLNcGrWDYIFSyVKtFqahlDrLLPDRvqVGMAqhFMrSYSDlLIrtcH tvvch MASY_CUCSA : 291- 340: rdhsv GLNcGrWDYIFSyVKtFqahpDrLLPDRvlVGMTqhFMrSYSDlLIrtcH rrgvh MASY_ECOLI : 271- 320: rdhiv GLNcGrWDYIFSyIKtLknypDrVLPDRqaVTMDkpFLnAYSRlLIktcH krgaf MASY_EMENI : 262- 311: rdhss GLNcGrWDYIFSfIKkFrqhpNfVLPDRsdVTMTvpFMdAYVKlLIktcH krgvh MASY_GOSHI : 290- 339: rdhsv GLNcGrWDYIFSyVKtFqghpDrLLPDRgqVGMTqhFMrSYSDlLIrtcH rrgvh MASY_HANPO : 284- 333: rdhsa GLNcGrWDYMFStIKrLrnqkQhILPDRhqVTMTvpFMtNYVKqLIkicH krgvh MASY_NEUCR : 274- 323: rnhts GLNrGgWDYIFPfIKeVrrfpNfVLPDRsdVTMTvpFMeAYVKlLIktlH rlvvh MASY_RICCO : 290- 339: rdhsv GLNcGrWDYIFSyVKtFqahpDrPLPDRvqVGMTqhFMkSYSDlLVwtcH rrgvh MASY_SOYBN : 287- 336: kdhsv GLNcGrWDYIFSyVKtFqahpDrLLPDRvlVGMTqhFMkSYSDlLIrtcH rrgvh MASY_YEAST : 282- 331: rqhss GLNcGrWDYIFStIKrLrndpNhILPNRnqVTMTspFMdAYVKrLIntcH rrgvh MASZ_YEAST : 282- 331: rehss GLNcGrWDYIFStIKkLrnlnEhVLPNRdlVTMTspFMdAYVKrLIntcH rrgvh E 5: 92.6686 18( 13) L-x(0,1)-P-x(0,1)-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV]-x(3)-H-x(3)-[ACV]-[FH]-[AV]-x-G-x(2)-A-[AQ]-x-[IP]-[IP]-x-[DKR]-[DE]-x(4)-[DEN] Occurences: 18(13) MASY_BRANA : 308- 357: ahpdr LlPdRvlVGMGqhFMrSYSDlLIrtcHkrgVHAmGgmAAqIPiRDdpkaN emald MASY_BRANA : 309- 357: hpdrl L-PdRvlVGMGqhFMrSYSDlLIrtcHkrgVHAmGgmAAqIPiRDdpkaN emald MASY_CANTR : 303- 351: hpdfi L-PdRsqVTMAapFMsSYVKlLVhttHkrkVHAlGgmAAqIPiKDdearN raale MASY_CUCMA : 313- 362: ahldr LlPdRvqVGMAqhFMrSYSDlLIrtcHtvvCHVgGmaAQiPIrDDpkanE malel MASY_CUCMA : 314- 362: hldrl L-PdRvqVGMAqhFMrSYSDlLIrtcHtvvCHVgGmaAQiPIrDDpkanE malel MASY_CUCSA : 314- 363: ahpdr LlPdRvlVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRDdpkaN evale MASY_CUCSA : 315- 363: hpdrl L-PdRvlVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRDdpkaN evale MASY_ECOLI : 295- 343: ypdrv L-PdRqaVTMDkpFLnAYSRlLIktcHkrgAFAmGgmAAfIPsKDeehnN qvlnk MASY_EMENI : 286- 334: hpnfv L-PdRsdVTMTvpFMdAYVKlLIktcHkrgVHAmGgmAAqIPiKDnaeaN dkame MASY_GOSHI : 313- 362: ghpdr LlPdRgqVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRDdptaN eaafe MASY_GOSHI : 314- 362: hpdrl L-PdRgqVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRDdptaN eaafe MASY_HANPO : 308- 356: qkqhi L-PdRhqVTMTvpFMtNYVKqLIkicHkrgVHAmGgmAAtIPiKDdpekN aaame MASY_NEUCR : 298- 346: fpnfv L-PdRsdVTMTvpFMeAYVKlLIktlHrlvVHAmGmaAQiPIkDDkaanD kameg MASY_RICCO : 314- 362: hpdrp L-PdRvqVGMTqhFMkSYSDlLVwtcHrrgVHAmGgmAAqIPiRDdpaaN kaale MASY_SOYBN : 310- 359: ahpdr LlPdRvlVGMTqhFMkSYSDlLIrtcHrrgVHAmGgmAAqIPiKEdpvaN evale MASY_SOYBN : 311- 359: hpdrl L-PdRvlVGMTqhFMkSYSDlLIrtcHrrgVHAmGgmAAqIPiKEdpvaN evale MASY_YEAST : 306- 354: dpnhi L-PnRnqVTMTspFMdAYVKrLIntcHrrgVHAmGgmAAqIPiKDdpaaN ekamt MASZ_YEAST : 306- 354: lnehv L-PnRdlVTMTspFMdAYVKrLIntcHrrgVHAmGgmAAqIPiKDdpkaN eaamn F 6: 90.5784 18( 13) L-x(0,1)-P-x-R-x(2)-V-[GT]-M-[ADGT]-x(2)-F-[LM]-x-[ANS]-Y-[SV]-[DKR]-x-L-[IV]-x(3)-H-x(3)-[ACV]-[FH]-[AV]-x-G-x(2)-A-[AQ]-x-[IP]-[IP]-x-[DKR]-[DE] Occurences: 18(13) MASY_BRANA : 308- 352: ahpdr LlPdRvlVGMGqhFMrSYSDlLIrtcHkrgVHAmGgmAAqIPiRD dpkan MASY_BRANA : 309- 352: hpdrl L-PdRvlVGMGqhFMrSYSDlLIrtcHkrgVHAmGgmAAqIPiRD dpkan MASY_CANTR : 303- 346: hpdfi L-PdRsqVTMAapFMsSYVKlLVhttHkrkVHAlGgmAAqIPiKD dearn MASY_CUCMA : 313- 357: ahldr LlPdRvqVGMAqhFMrSYSDlLIrtcHtvvCHVgGmaAQiPIrDD pkane MASY_CUCMA : 314- 357: hldrl L-PdRvqVGMAqhFMrSYSDlLIrtcHtvvCHVgGmaAQiPIrDD pkane MASY_CUCSA : 314- 358: ahpdr LlPdRvlVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRD dpkan MASY_CUCSA : 315- 358: hpdrl L-PdRvlVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRD dpkan MASY_ECOLI : 295- 338: ypdrv L-PdRqaVTMDkpFLnAYSRlLIktcHkrgAFAmGgmAAfIPsKD eehnn MASY_EMENI : 286- 329: hpnfv L-PdRsdVTMTvpFMdAYVKlLIktcHkrgVHAmGgmAAqIPiKD naean MASY_GOSHI : 313- 357: ghpdr LlPdRgqVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRD dptan MASY_GOSHI : 314- 357: hpdrl L-PdRgqVGMTqhFMrSYSDlLIrtcHrrgVHAmGgmAAqIPiRD dptan MASY_HANPO : 308- 351: qkqhi L-PdRhqVTMTvpFMtNYVKqLIkicHkrgVHAmGgmAAtIPiKD dpekn MASY_NEUCR : 298- 341: fpnfv L-PdRsdVTMTvpFMeAYVKlLIktlHrlvVHAmGmaAQiPIkDD kaand MASY_RICCO : 314- 357: hpdrp L-PdRvqVGMTqhFMkSYSDlLVwtcHrrgVHAmGgmAAqIPiRD dpaan MASY_SOYBN : 310- 354: ahpdr LlPdRvlVGMTqhFMkSYSDlLIrtcHrrgVHAmGgmAAqIPiKE dpvan MASY_SOYBN : 311- 354: hpdrl L-PdRvlVGMTqhFMkSYSDlLIrtcHrrgVHAmGgmAAqIPiKE dpvan MASY_YEAST : 306- 349: dpnhi L-PnRnqVTMTspFMdAYVKrLIntcHrrgVHAmGgmAAqIPiKD dpaan MASZ_YEAST : 306- 349: lnehv L-PnRdlVTMTspFMdAYVKrLIntcHrrgVHAmGgmAAqIPiKD dpkan G 7: 69.2890 13( 13) V-x(2)-D-K-x(2)-E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F Occurences: 13(13) MASY_BRANA : 364- 394: maldl VkkDKlrEvraGhDGTWAAHPGLIpiCmdAF shmgn MASY_CANTR : 358- 388: aalen VtkDKlrEvtlGcDSCWVAHPALVpvVlkVF nehmk MASY_CUCMA : 368- 398: malel VrkDKlrEakaGhDGTWAAHPGLIpaCmeVF tnsmg MASY_CUCSA : 370- 400: valel VrkDKlrEvkaGhDGTWAAHPGLIpaCmeVF tnnmg MASY_ECOLI : 349- 379: qvlnk VkaDKslEannGhDGTWIAHPGLAdtAmaVF ndilg MASY_EMENI : 341- 371: kameg VraDKlrEvraGhDGTWVAHPALAsiAseVF nkymp MASY_GOSHI : 369- 399: aafel VrkDKqrEvkaGhDGTWAAHPGLIktCmeVF tnnmg MASY_HANPO : 363- 393: aamea VrqDKlrEvlaGhDGTWIAHPGLLptAlsVF qehmp MASY_NEUCR : 352- 382: kameg VraDKlrEaraGhDGTWVAHPALAsiAleVF nkhmp MASY_RICCO : 369- 399: aalel VrkDKlrEvkaGhDGTWAAHPGLIpaCmeVF annmg MASY_SOYBN : 366- 396: valel VrkDKlrEvkaGhDGTWAAHPGLIpaCmeIF nnnmg MASY_YEAST : 361- 391: kamtk VrnDKirEltnGhDGSWVAHPALApiCneVF inmgt MASZ_YEAST : 361- 391: aamnk VrnDKirEmknGhDGSWVAHPALApiCneVF snmgt H 8: 65.1189 13( 13) D-K-x(2)-E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F Occurences: 13(13) MASY_BRANA : 367- 394: dlvkk DKlrEvraGhDGTWAAHPGLIpiCmdAF shmgn MASY_CANTR : 361- 388: envtk DKlrEvtlGcDSCWVAHPALVpvVlkVF nehmk MASY_CUCMA : 371- 398: elvrk DKlrEakaGhDGTWAAHPGLIpaCmeVF tnsmg MASY_CUCSA : 373- 400: elvrk DKlrEvkaGhDGTWAAHPGLIpaCmeVF tnnmg MASY_ECOLI : 352- 379: nkvka DKslEannGhDGTWIAHPGLAdtAmaVF ndilg MASY_EMENI : 344- 371: egvra DKlrEvraGhDGTWVAHPALAsiAseVF nkymp MASY_GOSHI : 372- 399: elvrk DKqrEvkaGhDGTWAAHPGLIktCmeVF tnnmg MASY_HANPO : 366- 393: eavrq DKlrEvlaGhDGTWIAHPGLLptAlsVF qehmp MASY_NEUCR : 355- 382: egvra DKlrEaraGhDGTWVAHPALAsiAleVF nkhmp MASY_RICCO : 372- 399: elvrk DKlrEvkaGhDGTWAAHPGLIpaCmeVF annmg MASY_SOYBN : 369- 396: elvrk DKlrEvkaGhDGTWAAHPGLIpaCmeIF nnnmg MASY_YEAST : 364- 391: tkvrn DKirEltnGhDGSWVAHPALApiCneVF inmgt MASZ_YEAST : 364- 391: nkvrn DKirEmknGhDGSWVAHPALApiCneVF snmgt I 9: 60.9489 13( 13) K-x(2)-E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F Occurences: 13(13) MASY_BRANA : 368- 394: lvkkd KlrEvraGhDGTWAAHPGLIpiCmdAF shmgn MASY_CANTR : 362- 388: nvtkd KlrEvtlGcDSCWVAHPALVpvVlkVF nehmk MASY_CUCMA : 372- 398: lvrkd KlrEakaGhDGTWAAHPGLIpaCmeVF tnsmg MASY_CUCSA : 374- 400: lvrkd KlrEvkaGhDGTWAAHPGLIpaCmeVF tnnmg MASY_ECOLI : 353- 379: kvkad KslEannGhDGTWIAHPGLAdtAmaVF ndilg MASY_EMENI : 345- 371: gvrad KlrEvraGhDGTWVAHPALAsiAseVF nkymp MASY_GOSHI : 373- 399: lvrkd KqrEvkaGhDGTWAAHPGLIktCmeVF tnnmg MASY_HANPO : 367- 393: avrqd KlrEvlaGhDGTWIAHPGLLptAlsVF qehmp MASY_NEUCR : 356- 382: gvrad KlrEaraGhDGTWVAHPALAsiAleVF nkhmp MASY_RICCO : 373- 399: lvrkd KlrEvkaGhDGTWAAHPGLIpaCmeVF annmg MASY_SOYBN : 370- 396: lvrkd KlrEvkaGhDGTWAAHPGLIpaCmeIF nnnmg MASY_YEAST : 365- 391: kvrnd KirEltnGhDGSWVAHPALApiCneVF inmgt MASZ_YEAST : 365- 391: kvrnd KirEmknGhDGSWVAHPALApiCneVF snmgt J 10: 57.7720 13( 13) P-[IL]-x(2)-[LP]-x-E-D-A-A-T-A-E-[IV]-S-R-x(3,5)-W-x(2)-[HY] Occurences: 13(13) MASY_BRANA : 455- 479: gsgsv PLynLmEDAATAEISRvqnwqWirY gveld MASY_CANTR : 451- 475: nvgcv PInyLmEDAATAEVSRtqiwqWvtH gaktd MASY_CUCMA : 460- 484: gtgsv PLynLmEDAATAEISRvqnwqWlkY gveld MASY_CUCSA : 462- 486: gagsv PLynLaEDAATAEISRvqnwqWlkY gveld MASY_ECOLI : 440- 464: gngcv PIygLmEDAATAEISRtsiwqWihH qktls MASY_EMENI : 431- 455: gvgci PInyLmEDAATAEVSRsqlwqWarH gvtts MASY_GOSHI : 461- 485: gsgsv PLynLmEDAATAEISRvqiwqWlkY gveld MASY_HANPO : 453- 477: glgcv PInnLmEDAATAEVSRlqlysWckH avkmd MASY_NEUCR : 442- 466: gvgcv PIkhPqEDAATAEVSRsqlwqWvkH rvtta MASY_RICCO : 461- 485: gtgsv PLynLmEDAATAEISRvqnwqWlkY gveld MASY_SOYBN : 458- 482: gsgsv PLynLmEDAATAEISRvqnwqWlkY gveln MASY_YEAST : 450- 474: gsgcv PInnLmEDAATAEVSRcqlyqWvkH gvtlk MASZ_YEAST : 450- 474: gsgcv PInhLmEDAATAEVSRcqlyqWvkH gvvls K 11: 56.7788 13( 13) E-x(3)-G-x-D-[GS]-[CST]-W-[AIV]-A-H-P-[AG]-L-[AILV]-x(2)-[ACV]-x(2)-[AIV]-F Occurences: 13(13) MASY_BRANA : 371- 394: kdklr EvraGhDGTWAAHPGLIpiCmdAF shmgn MASY_CANTR : 365- 388: kdklr EvtlGcDSCWVAHPALVpvVlkVF nehmk MASY_CUCMA : 375- 398: kdklr EakaGhDGTWAAHPGLIpaCmeVF tnsmg MASY_CUCSA : 377- 400: kdklr EvkaGhDGTWAAHPGLIpaCmeVF tnnmg MASY_ECOLI : 356- 379: adksl EannGhDGTWIAHPGLAdtAmaVF ndilg MASY_EMENI : 348- 371: adklr EvraGhDGTWVAHPALAsiAseVF nkymp MASY_GOSHI : 376- 399: kdkqr EvkaGhDGTWAAHPGLIktCmeVF tnnmg MASY_HANPO : 370- 393: qdklr EvlaGhDGTWIAHPGLLptAlsVF qehmp MASY_NEUCR : 359- 382: adklr EaraGhDGTWVAHPALAsiAleVF nkhmp MASY_RICCO : 376- 399: kdklr EvkaGhDGTWAAHPGLIpaCmeVF annmg MASY_SOYBN : 373- 396: kdklr EvkaGhDGTWAAHPGLIpaCmeIF nnnmg MASY_YEAST : 368- 391: ndkir EltnGhDGSWVAHPALApiCneVF inmgt MASZ_YEAST : 368- 391: ndkir EmknGhDGSWVAHPALApiCneVF snmgt L 12: 54.8207 13( 13) R-x(2)-E-[IM]-T-G-P-[PTV]-x(3)-M-[ILV]-[IV]-N-[AD]-[FL]-N-x(2,4)-V Occurences: 13(13) MASY_BRANA : 100- 123: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_CANTR : 95- 116: pglid RrcEITGPTdrkMVINALNsn--V atyma MASY_CUCMA : 105- 128: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_CUCSA : 106- 129: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_ECOLI : 90- 111: adled RrvEITGPVerkMVINALNan--V kvfma MASY_ECOLI : 90- 113: adled RrvEITGPVerkMVINALNanvkV fmadf MASY_EMENI : 91- 112: pglvd RrvEITGPTdrkMVVNALNsd--V aptwd MASY_GOSHI : 105- 128: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_HANPO : 99- 120: pklqc RkiEITGPPdakMIVNAFNtd--V ftymt MASY_NEUCR : 92- 113: pplvd RrvEMTGPTdrkMVVNALNsd--V ytyma MASY_RICCO : 105- 128: pavad RkvEITGPVerkMIINALNsgakV fmadf MASY_SOYBN : 102- 125: pavad RkvEITGPVdrkMVINALNsgakV fmadf MASY_YEAST : 99- 120: pglin RstEITGPPlrnMLINALNap--V ntymt MASZ_YEAST : 99- 120: pglin RssEITGPPlrnMLVNDLNae--V ttymt M 13: 54.3789 13( 13) D-x(2,3)-P-x-W-x(2)-[LMV]-[IMV]-x-G-Q-[IV]-N-L-x-D-A-[IV]-x(3)-[ILV]-[DST] Occurences: 13(13) MASY_BRANA : 130- 155: madfe DalsPsWenLMrGQVNLkDAVdgsIT fndka MASY_CANTR : 125- 150: madfe DsltPaWknLVeGQVNLyDAVrrnLS ating MASY_CUCMA : 135- 160: madfe DalsPnWenLMrGQINLkDAVdgtIS fhdka MASY_CUCSA : 136- 161: madfe DalsPnWenLMrGQINLkDAVdgtIS fhdrv MASY_ECOLI : 120- 145: madfe DslaPdWnkVIdGQINLrDAVngtIS ytnea MASY_EMENI : 111- 135: nalns Dva-PtWdnMInGQINLyDAIrrqVD fkqgq MASY_GOSHI : 135- 160: madfe DalsPsWenLMrGQINLkDAVegtIT fndka MASY_HANPO : 129- 154: mtdfe DscsPtWnnMIyGQVNLyDAIrdrID ftnea MASY_NEUCR : 122- 147: madfe DssaPtWanMVnGQVNLyDAIrrqID fkqgp MASY_RICCO : 135- 160: madfe DalsPsWenLMrGQVNLrDAVngtIS fhdka MASY_SOYBN : 132- 157: madfe DalsPgWenLMrGQVNLkDAVagtIS lhdka MASY_YEAST : 129- 154: mtdfe DsasPtWnnMVyGQVNLyDAIrnqID fdtpr MASZ_YEAST : 129- 154: mtdfe DsssPtWenMIyGQVNLyDAIrnqID fktpr N 14: 54.3207 21( 13) R-x(1,2)-E-[IM]-T-G-P-[PTV]-x(3)-M-[ILV]-[IV]-N-[AD]-[FL]-N-x(2,4)-V Occurences: 21(13) MASY_BRANA : 100- 123: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_BRANA : 101- 123: avadr Rv-EITGPVerkMIINALNsgakV fmadf MASY_CANTR : 95- 116: pglid RrcEITGPTdrkMVINALNsn--V atyma MASY_CANTR : 96- 116: glidr Rc-EITGPTdrkMVINALNsn--V atyma MASY_CUCMA : 105- 128: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_CUCMA : 106- 128: avadr Rv-EITGPVerkMIINALNsgakV fmadf MASY_CUCSA : 106- 129: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_CUCSA : 107- 129: avadr Rv-EITGPVerkMIINALNsgakV fmadf MASY_ECOLI : 90- 111: adled RrvEITGPVerkMVINALNan--V kvfma MASY_ECOLI : 90- 113: adled RrvEITGPVerkMVINALNanvkV fmadf MASY_ECOLI : 91- 111: dledr Rv-EITGPVerkMVINALNan--V kvfma MASY_ECOLI : 91- 113: dledr Rv-EITGPVerkMVINALNanvkV fmadf MASY_EMENI : 91- 112: pglvd RrvEITGPTdrkMVVNALNsd--V aptwd MASY_EMENI : 92- 112: glvdr Rv-EITGPTdrkMVVNALNsd--V aptwd MASY_GOSHI : 105- 128: pavad RrvEITGPVerkMIINALNsgakV fmadf MASY_GOSHI : 106- 128: avadr Rv-EITGPVerkMIINALNsgakV fmadf MASY_HANPO : 99- 120: pklqc RkiEITGPPdakMIVNAFNtd--V ftymt MASY_NEUCR : 92- 113: pplvd RrvEMTGPTdrkMVVNALNsd--V ytyma MASY_NEUCR : 93- 113: plvdr Rv-EMTGPTdrkMVVNALNsd--V ytyma MASY_RICCO : 105- 128: pavad RkvEITGPVerkMIINALNsgakV fmadf MASY_SOYBN : 102- 125: pavad RkvEITGPVdrkMVINALNsgakV fmadf MASY_YEAST : 99- 120: pglin RstEITGPPlrnMLINALNap--V ntymt MASZ_YEAST : 99- 120: pglin RssEITGPPlrnMLVNDLNae--V ttymt O 15: 53.8789 13( 13) D-x(2,3)-P-x(0,1)-W-x(2)-[LMV]-[IMV]-x-G-Q-[IV]-N-L-x-D-A-[IV]-x(3)-[ILV]-[DST] Occurences: 13(13) MASY_BRANA : 130- 155: madfe DalsPsWenLMrGQVNLkDAVdgsIT fndka MASY_CANTR : 125- 150: madfe DsltPaWknLVeGQVNLyDAVrrnLS ating MASY_CUCMA : 135- 160: madfe DalsPnWenLMrGQINLkDAVdgtIS fhdka MASY_CUCSA : 136- 161: madfe DalsPnWenLMrGQINLkDAVdgtIS fhdrv MASY_ECOLI : 120- 145: madfe DslaPdWnkVIdGQINLrDAVngtIS ytnea MASY_EMENI : 111- 135: nalns Dva-PtWdnMInGQINLyDAIrrqVD fkqgq MASY_GOSHI : 135- 160: madfe DalsPsWenLMrGQINLkDAVegtIT fndka MASY_HANPO : 129- 154: mtdfe DscsPtWnnMIyGQVNLyDAIrdrID ftnea MASY_NEUCR : 122- 147: madfe DssaPtWanMVnGQVNLyDAIrrqID fkqgp MASY_RICCO : 135- 160: madfe DalsPsWenLMrGQVNLrDAVngtIS fhdka MASY_SOYBN : 132- 157: madfe DalsPgWenLMrGQVNLkDAVagtIS lhdka MASY_YEAST : 129- 154: mtdfe DsasPtWnnMVyGQVNLyDAIrnqID fdtpr MASZ_YEAST : 129- 154: mtdfe DsssPtWenMIyGQVNLyDAIrnqID fktpr P 16: 53.7353 13( 13) D-A-A-T-A-E-[IV]-S-R-x-[QS]-x-[WY]-[QS]-W-x(2)-[HY] Occurences: 13(13) MASY_BRANA : 462- 479: ynlme DAATAEISRvQnWQWirY gveld MASY_CANTR : 458- 475: nylme DAATAEVSRtQiWQWvtH gaktd MASY_CUCMA : 467- 484: ynlme DAATAEISRvQnWQWlkY gveld MASY_CUCSA : 469- 486: ynlae DAATAEISRvQnWQWlkY gveld MASY_ECOLI : 447- 464: yglme DAATAEISRtSiWQWihH qktls MASY_EMENI : 438- 455: nylme DAATAEVSRsQlWQWarH gvtts MASY_GOSHI : 468- 485: ynlme DAATAEISRvQiWQWlkY gveld MASY_HANPO : 460- 477: nnlme DAATAEVSRlQlYSWckH avkmd MASY_NEUCR : 449- 466: khpqe DAATAEVSRsQlWQWvkH rvtta MASY_RICCO : 468- 485: ynlme DAATAEISRvQnWQWlkY gveld MASY_SOYBN : 465- 482: ynlme DAATAEISRvQnWQWlkY gveln MASY_YEAST : 457- 474: nnlme DAATAEVSRcQlYQWvkH gvtlk MASZ_YEAST : 457- 474: nhlme DAATAEVSRcQlYQWvkH gvvls Q 17: 49.8893 13( 13) P-[ADGNST]-W-x(0,1)-N-x(3,4)-G-Q-[IV]-N-L-x-D-A-[IV]-x(3)-[ILV]-[DST] Occurences: 13(13) MASY_BRANA : 134- 155: edals PSWeNlmr-GQVNLkDAVdgsIT fndka MASY_CANTR : 129- 150: edslt PAWkNlve-GQVNLyDAVrrnLS ating MASY_CUCMA : 139- 160: edals PNWeNlmr-GQINLkDAVdgtIS fhdka MASY_CUCSA : 140- 161: edals PNWeNlmr-GQINLkDAVdgtIS fhdrv MASY_ECOLI : 124- 145: edsla PDW-NkvidGQINLrDAVngtIS ytnea MASY_EMENI : 114- 135: nsdva PTWdNmin-GQINLyDAIrrqVD fkqgq MASY_GOSHI : 139- 160: edals PSWeNlmr-GQINLkDAVegtIT fndka MASY_HANPO : 133- 154: edscs PTWnNmiy-GQVNLyDAIrdrID ftnea MASY_HANPO : 133- 154: edscs PTW-NnmiyGQVNLyDAIrdrID ftnea MASY_NEUCR : 126- 147: edssa PTWaNmvn-GQVNLyDAIrrqID fkqgp MASY_RICCO : 139- 160: edals PSWeNlmr-GQVNLrDAVngtIS fhdka MASY_SOYBN : 136- 157: edals PGWeNlmr-GQVNLkDAVagtIS lhdka MASY_YEAST : 133- 154: edsas PTWnNmvy-GQVNLyDAIrnqID fdtpr MASY_YEAST : 133- 154: edsas PTW-NnmvyGQVNLyDAIrnqID fdtpr MASZ_YEAST : 133- 154: edsss PTWeNmiy-GQVNLyDAIrnqID fktpr R 18: 49.5653 13( 13) A-A-T-A-E-[IV]-S-R-x-[QS]-x-[WY]-[QS]-W-x(2)-[HY] Occurences: 13(13) MASY_BRANA : 463- 479: nlmed AATAEISRvQnWQWirY gveld MASY_CANTR : 459- 475: ylmed AATAEVSRtQiWQWvtH gaktd MASY_CUCMA : 468- 484: nlmed AATAEISRvQnWQWlkY gveld MASY_CUCSA : 470- 486: nlaed AATAEISRvQnWQWlkY gveld MASY_ECOLI : 448- 464: glmed AATAEISRtSiWQWihH qktls MASY_EMENI : 439- 455: ylmed AATAEVSRsQlWQWarH gvtts MASY_GOSHI : 469- 485: nlmed AATAEISRvQiWQWlkY gveld MASY_HANPO : 461- 477: nlmed AATAEVSRlQlYSWckH avkmd MASY_NEUCR : 450- 466: hpqed AATAEVSRsQlWQWvkH rvtta MASY_RICCO : 469- 485: nlmed AATAEISRvQnWQWlkY gveld MASY_SOYBN : 466- 482: nlmed AATAEISRvQnWQWlkY gveln MASY_YEAST : 458- 474: nlmed AATAEVSRcQlYQWvkH gvtlk MASZ_YEAST : 458- 474: hlmed AATAEVSRcQlYQWvkH gvvls S 19: 47.0979 13( 13) E-D-A-A-T-A-E-[IV]-S-R-x(3,5)-W-x(2)-[HY] Occurences: 13(13) MASY_BRANA : 461- 479: lynlm EDAATAEISRvqnwqWirY gveld MASY_CANTR : 457- 475: inylm EDAATAEVSRtqiwqWvtH gaktd MASY_CUCMA : 466- 484: lynlm EDAATAEISRvqnwqWlkY gveld MASY_CUCSA : 468- 486: lynla EDAATAEISRvqnwqWlkY gveld MASY_ECOLI : 446- 464: iyglm EDAATAEISRtsiwqWihH qktls MASY_EMENI : 437- 455: inylm EDAATAEVSRsqlwqWarH gvtts MASY_GOSHI : 467- 485: lynlm EDAATAEISRvqiwqWlkY gveld MASY_HANPO : 459- 477: innlm EDAATAEVSRlqlysWckH avkmd MASY_NEUCR : 448- 466: ikhpq EDAATAEVSRsqlwqWvkH rvtta MASY_RICCO : 467- 485: lynlm EDAATAEISRvqnwqWlkY gveld MASY_SOYBN : 464- 482: lynlm EDAATAEISRvqnwqWlkY gveln MASY_YEAST : 456- 474: innlm EDAATAEVSRcqlyqWvkH gvtlk MASZ_YEAST : 456- 474: inhlm EDAATAEVSRcqlyqWvkH gvvls T 20: 42.9278 13( 13) D-A-A-T-A-E-[IV]-S-R-x(3,5)-W-x(2)-[HY] Occurences: 13(13) MASY_BRANA : 462- 479: ynlme DAATAEISRvqnwqWirY gveld MASY_CANTR : 458- 475: nylme DAATAEVSRtqiwqWvtH gaktd MASY_CUCMA : 467- 484: ynlme DAATAEISRvqnwqWlkY gveld MASY_CUCSA : 469- 486: ynlae DAATAEISRvqnwqWlkY gveld MASY_ECOLI : 447- 464: yglme DAATAEISRtsiwqWihH qktls MASY_EMENI : 438- 455: nylme DAATAEVSRsqlwqWarH gvtts MASY_GOSHI : 468- 485: ynlme DAATAEISRvqiwqWlkY gveld MASY_HANPO : 460- 477: nnlme DAATAEVSRlqlysWckH avkmd MASY_NEUCR : 449- 466: khpqe DAATAEVSRsqlwqWvkH rvtta MASY_RICCO : 468- 485: ynlme DAATAEISRvqnwqWlkY gveld MASY_SOYBN : 465- 482: ynlme DAATAEISRvqnwqWlkY gveln MASY_YEAST : 457- 474: nnlme DAATAEVSRcqlyqWvkH gvtlk MASZ_YEAST : 457- 474: nhlme DAATAEVSRcqlyqWvkH gvvls Number of patterns evaluated by Pratt:26044 Total 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