------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 89 sequences from file KAZAL PATTERN CONSERVATION: CM: min Nr of Seqs to Match 89 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename KAZAL.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: IAC1_BOVIN 63 IAC2_BOVIN 57 IAC2_HUMAN 84 IACA_PIG 65 IACS_PIG 71 IAC_MACFA 81 IBD3_HIRME 56 IOV7_CHICK 471 IOVO_ABUPI 56 IOVO_ALECH 54 IOVO_ANAPL 54 IOVO_ANHNO 54 IOVO_ANSAN 54 IOVO_ANSSE 54 IOVO_ARBTO 53 IOVO_ARGAR 54 IOVO_BONUM 56 IOVO_BRACA 54 IOVO_CALSC 56 IOVO_CALSP 56 IOVO_CARRE 54 IOVO_CASCA 54 IOVO_CERNO 54 IOVO_CHICK 210 IOVO_CHRAM 56 IOVO_CIRAE 54 IOVO_COLVI 56 IOVO_COSCO 54 IOVO_COTDE 52 IOVO_COTJA 186 IOVO_CYGAT 54 IOVO_CYRMO 56 IOVO_DACNO 55 IOVO_DENAR 54 IOVO_DENEY 54 IOVO_DENVD 54 IOVO_DRONO 54 IOVO_EUDEL 51 IOVO_FRAAF 53 IOVO_FRACO 53 IOVO_FRAER 56 IOVO_FRAFR 53 IOVO_FRAPO 56 IOVO_FULAT 54 IOVO_GEOCA 54 IOVO_GRUCA 54 IOVO_GYPCO 54 IOVO_HALIN 54 IOVO_LARRI 54 IOVO_LEIOC 54 IOVO_LOPCA 56 IOVO_LOPIG 56 IOVO_MEGFR 54 IOVO_MELGA 185 IOVO_NOTCI 51 IOVO_NUMME 54 IOVO_NYCNY 54 IOVO_OREPI 56 IOVO_ORTVE 56 IOVO_PAVCR 56 IOVO_PENJC 56 IOVO_PERPE 56 IOVO_PHACO 56 IOVO_PHASU 54 IOVO_POLBI 53 IOVO_RHEAM 54 IOVO_SPHHU 54 IOVO_STRCA 54 IOVO_SYRRE 56 IOVO_TURSY 53 IOVO_TYMCU 56 IOVO_VULGR 54 IPS1_RAT 79 IPS2_RAT 79 IPSG_CANFA 115 IPSG_FELCA 111 IPSG_MELME 122 IPSG_PANLE 112 IPSG_VULVU 115 IPST_ANGAN 61 IPST_BOVIN 56 IPST_CANFA 57 IPST_HUMAN 79 IPST_PIG 56 IPST_SHEEP 56 LDTI_HIRME 46 PE60_PIG 86 PSG1_MOUSE 80 THBI_RHOPR 103 Pratt run started at Thu Feb 6 20:07:45 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 107( 89) Y-x(3)-C-x(2,3)-C 2: 7.8401 113( 89) C-x(2,3)-C 3: 7.8401 107( 89) C-x(1,2)-C 4: 7.3401 213( 89) K-x(3,5)-C Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 14.6351 106( 89) Y-x-[DNS]-x-C-x(2,3)-C B 2: 7.8401 113( 89) C-x(2,3)-C C 3: 7.8401 107( 89) C-x(1,2)-C D 4: 7.3401 213( 89) K-x(3,5)-C Best patterns with alignements: fitness hits(seqs) Pattern A 1: 14.6351 106( 89) Y-x-[DNS]-x-C-x(2,3)-C Occurences: 106(89) IAC1_BOVIN : 36- 43: saakt YsNeCtf-C nekmn IAC2_BOVIN : 32- 39: snget YgNkCaf-C kavmk IAC2_HUMAN : 59- 66: sdmst YaNeCtl-C mkire IACA_PIG : 32- 39: tngks YaNpCif-C sekgl IACS_PIG : 37- 44: tngks YaNpCif-C seklg IAC_MACFA : 56- 63: tdmit YpNeCtl-C mkire IBD3_HIRME : 21- 29: sdgvt YdNeClatC hgasv IOV7_CHICK : 60- 67: tdgst YsNeCgi-C lynre IOV7_CHICK : 125- 132: sdsft YdNeCgi-C aynae IOV7_CHICK : 191- 198: tdgft YdNeCgi-C ahnae IOV7_CHICK : 257- 264: tdgft YdNeCgi-C ahnaq IOV7_CHICK : 322- 329: tdgvt YsNdCsl-C ahnel IOV7_CHICK : 387- 394: tngvt YaSeCtl-C ahnle IOV7_CHICK : 446- 453: sdgvt YsNrCff-C nayvq IOVO_ABUPI : 31- 38: sdnkt YdNkCsf-C navvd IOVO_ALECH : 29- 36: sdskt YgNkCnf-C navve IOVO_ANAPL : 29- 36: sdnkt YgNkCnf-C navvd IOVO_ANHNO : 29- 36: sdskt YsNkCnf-C navvd IOVO_ANSAN : 29- 36: sdnkt YdNkCnf-C navvd IOVO_ANSSE : 29- 36: sdnqt YsNkCnf-C navvd IOVO_ARBTO : 28- 35: sdnkt YgNkCnf-C navve IOVO_ARGAR : 29- 36: sdnki YsNkCdf-C navle IOVO_BONUM : 31- 38: sdnkt YgNkCnf-C navve IOVO_BRACA : 29- 36: sdnkt YgNkCnf-C navvd IOVO_CALSC : 31- 38: sdnkt YaNkCnf-C navve IOVO_CALSP : 31- 38: sdnkt YaSkCnf-C navve IOVO_CARRE : 29- 36: sdnit YhNkCyf-C navah IOVO_CASCA : 29- 36: sdskt YnNkCdf-C savve IOVO_CERNO : 29- 36: sdnkt YgNkCnf-C navvd IOVO_CHICK : 61- 68: tdgvt YtNdCll-C aysie IOVO_CHICK : 126- 133: tdgvt YdNeCll-C ahkve IOVO_CHICK : 185- 192: sdnkt YgNkCnf-C navve IOVO_CHRAM : 31- 38: sdnkt YgNkCnf-C navve IOVO_CIRAE : 29- 36: sdskt YsNkCdf-C nafvd IOVO_COLVI : 31- 38: sdnkt YvNkCnf-C navve IOVO_COSCO : 29- 36: sdnkt YgNkCnf-C navvd IOVO_COTDE : 27- 34: sdnkt YgNkCnf-C navve IOVO_COTJA : 102- 109: tdgvt YdNeCml-C ahnvv IOVO_COTJA : 161- 168: sdnkt YsNkCnf-C navve IOVO_CYGAT : 29- 36: sdnkt YgNkCnf-C navvd IOVO_CYRMO : 31- 38: sdnkt YgNkCnf-C navve IOVO_DACNO : 30- 37: sdskt YsNkCdf-C navmd IOVO_DENAR : 29- 36: sdnkt YgNkCnf-C navvd IOVO_DENEY : 29- 36: sdnkt YgNkCnf-C navvd IOVO_DENVD : 29- 36: sdnkt YgNrCnf-C navvd IOVO_DRONO : 29- 36: sdskt YnNkCdf-C navve IOVO_EUDEL : 28- 35: sdnqt YsNkCaf-C naave IOVO_FRAAF : 28- 35: sdnit YgNkCnf-C navvk IOVO_FRACO : 28- 35: sdnit YgNkCnf-C navvk IOVO_FRAER : 31- 38: sdnit YgNkCnf-C navvk IOVO_FRAFR : 28- 35: sdnkt YrNkCnf-C navve IOVO_FRAPO : 31- 38: sdnkt YgNkCnf-C navve IOVO_FULAT : 29- 36: sdnkt YsNkCdf-C navad IOVO_GEOCA : 29- 36: sdnkt YgNkCnf-C navad IOVO_GRUCA : 29- 36: sdskt YsNkCnf-C navvd IOVO_GYPCO : 29- 36: sdskt YsNkCdf-C navvd IOVO_HALIN : 29- 36: sdskt YsNkCdf-C navvd IOVO_LARRI : 29- 36: sdskt YsNkCnf-C navvd IOVO_LEIOC : 29- 36: sdnqt YsNkCgf-C navaq IOVO_LOPCA : 31- 38: sdnkt YaNkCnf-C navve IOVO_LOPIG : 31- 38: sdnks YdNkCnf-C navve IOVO_MEGFR : 29- 36: sdnqt YsNkCsf-C navvd IOVO_MELGA : 101- 108: tdgvt YdNeCvl-C ahnle IOVO_MELGA : 160- 167: sdnkt YgNkCnf-C navve IOVO_NOTCI : 28- 35: sdnqt YaNkCaf-C navve IOVO_NUMME : 29- 36: sdnkt YdNkCnf-C navve IOVO_NYCNY : 29- 36: sdskt YsNkCdf-C navad IOVO_OREPI : 31- 38: sdskt YaNkCnf-C navve IOVO_ORTVE : 31- 38: sdnkt YdNkCsf-C navvd IOVO_PAVCR : 31- 38: sdnkt YgNkCnf-C navve IOVO_PENJC : 31- 38: sdnkt YdNkCsf-C navvd IOVO_PERPE : 31- 38: sdnkt YgNkCdf-C navve IOVO_PHACO : 31- 38: sdnkt YgNkCnf-C navve IOVO_PHASU : 29- 36: sdskt YsNkCnf-C navad IOVO_POLBI : 28- 35: snnet YgNkCnf-C navvk IOVO_RHEAM : 29- 36: sdskt YsNkCdf-C navve IOVO_SPHHU : 29- 36: sdskt YsNkCnf-C navvd IOVO_STRCA : 29- 36: sdskt YsNkCnf-C navve IOVO_SYRRE : 31- 38: sdnkt YgNkCnf-C navve IOVO_TURSY : 28- 35: sdnkt YnDkCnf-C navve IOVO_TYMCU : 31- 38: sdnkt YgNkCnf-C navve IOVO_VULGR : 29- 36: sdskt YsNkCnf-C navvd IPS1_RAT : 54- 61: tngit YpSeCsl-C fenrk IPS2_RAT : 54- 61: tdgkt YaNeCil-C fenrk IPSG_CANFA : 39- 46: tdhkt YsNeCmf-C altln IPSG_CANFA : 90- 97: sdgkn YsNkCsf-C navkk IPSG_FELCA : 35- 42: idhkt YsNeCmf-C qlnqn IPSG_FELCA : 86- 93: sdgqe YsNkClf-C nevvk IPSG_MELME : 43- 50: tdhrt YsNeCmf-C mltqn IPSG_MELME : 94- 101: sdgnn YsNkClf-C navlr IPSG_PANLE : 35- 42: idhkt YsNeCmf-C llnqn IPSG_PANLE : 56- 64: qirkl YdDkCqieC tnysa IPSG_PANLE : 86- 93: sdgkv YsNkCsf-C nevvk IPSG_VULVU : 39- 46: tdhnt YsNeCmf-C altln IPSG_VULVU : 90- 97: sdgkn YsNkCif-C navvr IPST_ANGAN : 36- 43: tdgnt YpNeCsl-C fqrqn IPST_BOVIN : 31- 38: tdgvt YsNeCll-C menke IPST_CANFA : 32- 39: sdgit YaNeCll-C lenkk IPST_HUMAN : 54- 61: tdgnt YpNeCvl-C fenrk IPST_PIG : 31- 38: tdgit YsNeCvl-C senkk IPST_SHEEP : 31- 38: tdgvt YaNeCll-C menke LDTI_HIRME : 21- 29: sdgrt YaNsCiarC ngvsi PE60_PIG : 61- 68: tdgvt YeSeCkl-C larie PSG1_MOUSE : 55- 62: tdgit YaNeCvl-C fenrk THBI_RHOPR : 23- 31: sdget YsNpCtlnC akfng THBI_RHOPR : 76- 84: sddit YdNnCrleC asiss B 2: 7.8401 113( 89) C-x(2,3)-C Occurences: 113(89) IAC1_BOVIN : 40- 43: tysne Ctf-C nekmn IAC2_BOVIN : 36- 39: tygnk Caf-C kavmk IAC2_HUMAN : 63- 66: tyane Ctl-C mkire IACA_PIG : 36- 39: syanp Cif-C sekgl IACS_PIG : 41- 44: syanp Cif-C seklg IAC_MACFA : 60- 63: typne Ctl-C mkire IBD3_HIRME : 25- 29: tydne ClatC hgasv IOV7_CHICK : 64- 67: tysne Cgi-C lynre IOV7_CHICK : 129- 132: tydne Cgi-C aynae IOV7_CHICK : 195- 198: tydne Cgi-C ahnae IOV7_CHICK : 261- 264: tydne Cgi-C ahnaq IOV7_CHICK : 326- 329: tysnd Csl-C ahnel IOV7_CHICK : 391- 394: tyase Ctl-C ahnle IOV7_CHICK : 450- 453: tysnr Cff-C nayvq IOVO_ABUPI : 35- 38: tydnk Csf-C navvd IOVO_ALECH : 33- 36: tygnk Cnf-C navve IOVO_ANAPL : 33- 36: tygnk Cnf-C navvd IOVO_ANHNO : 33- 36: tysnk Cnf-C navvd IOVO_ANSAN : 33- 36: tydnk Cnf-C navvd IOVO_ANSSE : 33- 36: tysnk Cnf-C navvd IOVO_ARBTO : 32- 35: tygnk Cnf-C navve IOVO_ARGAR : 33- 36: iysnk Cdf-C navle IOVO_BONUM : 35- 38: tygnk Cnf-C navve IOVO_BRACA : 33- 36: tygnk Cnf-C navvd IOVO_CALSC : 35- 38: tyank Cnf-C navve IOVO_CALSP : 35- 38: tyask Cnf-C navve IOVO_CARRE : 33- 36: tyhnk Cyf-C navah IOVO_CASCA : 33- 36: tynnk Cdf-C savve IOVO_CERNO : 33- 36: tygnk Cnf-C navvd IOVO_CHICK : 65- 68: tytnd Cll-C aysie IOVO_CHICK : 130- 133: tydne Cll-C ahkve IOVO_CHICK : 189- 192: tygnk Cnf-C navve IOVO_CHRAM : 35- 38: tygnk Cnf-C navve IOVO_CIRAE : 33- 36: tysnk Cdf-C nafvd IOVO_COLVI : 35- 38: tyvnk Cnf-C navve IOVO_COSCO : 33- 36: tygnk Cnf-C navvd IOVO_COTDE : 31- 34: tygnk Cnf-C navve IOVO_COTJA : 41- 44: tynhe Cml-C fynke IOVO_COTJA : 106- 109: tydne Cml-C ahnvv IOVO_COTJA : 165- 168: tysnk Cnf-C navve IOVO_CYGAT : 33- 36: tygnk Cnf-C navvd IOVO_CYRMO : 35- 38: tygnk Cnf-C navve IOVO_DACNO : 34- 37: tysnk Cdf-C navmd IOVO_DENAR : 33- 36: tygnk Cnf-C navvd IOVO_DENEY : 33- 36: tygnk Cnf-C navvd IOVO_DENVD : 33- 36: tygnr Cnf-C navvd IOVO_DRONO : 33- 36: tynnk Cdf-C navve IOVO_EUDEL : 32- 35: tysnk Caf-C naave IOVO_FRAAF : 32- 35: tygnk Cnf-C navvk IOVO_FRACO : 32- 35: tygnk Cnf-C navvk IOVO_FRAER : 35- 38: tygnk Cnf-C navvk IOVO_FRAFR : 32- 35: tyrnk Cnf-C navve IOVO_FRAPO : 35- 38: tygnk Cnf-C navve IOVO_FULAT : 33- 36: tysnk Cdf-C navad IOVO_GEOCA : 33- 36: tygnk Cnf-C navad IOVO_GRUCA : 33- 36: tysnk Cnf-C navvd IOVO_GYPCO : 33- 36: tysnk Cdf-C navvd IOVO_HALIN : 33- 36: tysnk Cdf-C navvd IOVO_LARRI : 33- 36: tysnk Cnf-C navvd IOVO_LEIOC : 33- 36: tysnk Cgf-C navaq IOVO_LOPCA : 35- 38: tyank Cnf-C navve IOVO_LOPIG : 35- 38: sydnk Cnf-C navve IOVO_MEGFR : 33- 36: tysnk Csf-C navvd IOVO_MELGA : 40- 43: vthse Cll-C aynie IOVO_MELGA : 105- 108: tydne Cvl-C ahnle IOVO_MELGA : 164- 167: tygnk Cnf-C navve IOVO_NOTCI : 32- 35: tyank Caf-C navve IOVO_NUMME : 33- 36: tydnk Cnf-C navve IOVO_NYCNY : 33- 36: tysnk Cdf-C navad IOVO_OREPI : 35- 38: tyank Cnf-C navve IOVO_ORTVE : 35- 38: tydnk Csf-C navvd IOVO_PAVCR : 35- 38: tygnk Cnf-C navve IOVO_PENJC : 35- 38: tydnk Csf-C navvd IOVO_PERPE : 35- 38: tygnk Cdf-C navve IOVO_PHACO : 35- 38: tygnk Cnf-C navve IOVO_PHASU : 33- 36: tysnk Cnf-C navad IOVO_POLBI : 32- 35: tygnk Cnf-C navvk IOVO_RHEAM : 33- 36: tysnk Cdf-C navve IOVO_SPHHU : 33- 36: tysnk Cnf-C navvd IOVO_STRCA : 33- 36: tysnk Cnf-C navve IOVO_SYRRE : 35- 38: tygnk Cnf-C navve IOVO_TURSY : 32- 35: tyndk Cnf-C navve IOVO_TYMCU : 35- 38: tygnk Cnf-C navve IOVO_VULGR : 33- 36: tysnk Cnf-C navvd IPS1_RAT : 58- 61: typse Csl-C fenrk IPS2_RAT : 58- 61: tyane Cil-C fenrk IPSG_CANFA : 43- 46: tysne Cmf-C altln IPSG_CANFA : 64- 68: lqdta CdieC teysd IPSG_CANFA : 94- 97: nysnk Csf-C navkk IPSG_FELCA : 39- 42: tysne Cmf-C qlnqn IPSG_FELCA : 60- 64: lhdnk CqieC tnysa IPSG_FELCA : 90- 93: eysnk Clf-C nevvk IPSG_MELME : 47- 50: tysne Cmf-C mltqn IPSG_MELME : 68- 72: lqdnn CdieC tqysd IPSG_MELME : 98- 101: nysnk Clf-C navlr IPSG_PANLE : 39- 42: tysne Cmf-C llnqn IPSG_PANLE : 60- 64: lyddk CqieC tnysa IPSG_PANLE : 90- 93: vysnk Csf-C nevvk IPSG_VULVU : 43- 46: tysne Cmf-C altln IPSG_VULVU : 64- 68: lqdta CdieC teysd IPSG_VULVU : 94- 97: nysnk Cif-C navvr IPST_ANGAN : 40- 43: typne Csl-C fqrqn IPST_BOVIN : 35- 38: tysne Cll-C menke IPST_CANFA : 36- 39: tyane Cll-C lenkk IPST_HUMAN : 58- 61: typne Cvl-C fenrk IPST_PIG : 35- 38: tysne Cvl-C senkk IPST_SHEEP : 35- 38: tyane Cll-C menke LDTI_HIRME : 25- 29: tyans CiarC ngvsi PE60_PIG : 65- 68: tyese Ckl-C larie PSG1_MOUSE : 59- 62: tyane Cvl-C fenrk THBI_RHOPR : 27- 31: tysnp CtlnC akfng THBI_RHOPR : 57- 60: ededv Cqe-C dgdey THBI_RHOPR : 80- 84: tydnn CrleC asiss C 3: 7.8401 107( 89) C-x(1,2)-C Occurences: 107(89) IAC1_BOVIN : 40- 43: tysne CtfC nekmn IAC2_BOVIN : 36- 39: tygnk CafC kavmk IAC2_HUMAN : 63- 66: tyane CtlC mkire IACA_PIG : 36- 39: syanp CifC sekgl IACS_PIG : 41- 44: syanp CifC seklg IAC_MACFA : 60- 63: typne CtlC mkire IBD3_HIRME : 4- 6: dte Cv-C tkelh IOV7_CHICK : 64- 67: tysne CgiC lynre IOV7_CHICK : 129- 132: tydne CgiC aynae IOV7_CHICK : 195- 198: tydne CgiC ahnae IOV7_CHICK : 261- 264: tydne CgiC ahnaq IOV7_CHICK : 326- 329: tysnd CslC ahnel IOV7_CHICK : 391- 394: tyase CtlC ahnle IOV7_CHICK : 450- 453: tysnr CffC nayvq IOVO_ABUPI : 35- 38: tydnk CsfC navvd IOVO_ALECH : 33- 36: tygnk CnfC navve IOVO_ANAPL : 33- 36: tygnk CnfC navvd IOVO_ANHNO : 33- 36: tysnk CnfC navvd IOVO_ANSAN : 33- 36: tydnk CnfC navvd IOVO_ANSSE : 33- 36: tysnk CnfC navvd IOVO_ARBTO : 32- 35: tygnk CnfC navve IOVO_ARGAR : 33- 36: iysnk CdfC navle IOVO_BONUM : 35- 38: tygnk CnfC navve IOVO_BRACA : 33- 36: tygnk CnfC navvd IOVO_CALSC : 35- 38: tyank CnfC navve IOVO_CALSP : 35- 38: tyask CnfC navve IOVO_CARRE : 33- 36: tyhnk CyfC navah IOVO_CASCA : 33- 36: tynnk CdfC savve IOVO_CERNO : 33- 36: tygnk CnfC navvd IOVO_CHICK : 65- 68: tytnd CllC aysie IOVO_CHICK : 130- 133: tydne CllC ahkve IOVO_CHICK : 189- 192: tygnk CnfC navve IOVO_CHRAM : 35- 38: tygnk CnfC navve IOVO_CIRAE : 33- 36: tysnk CdfC nafvd IOVO_COLVI : 35- 38: tyvnk CnfC navve IOVO_COSCO : 33- 36: tygnk CnfC navvd IOVO_COTDE : 31- 34: tygnk CnfC navve IOVO_COTJA : 41- 44: tynhe CmlC fynke IOVO_COTJA : 106- 109: tydne CmlC ahnvv IOVO_COTJA : 165- 168: tysnk CnfC navve IOVO_CYGAT : 33- 36: tygnk CnfC navvd IOVO_CYRMO : 35- 38: tygnk CnfC navve IOVO_DACNO : 34- 37: tysnk CdfC navmd IOVO_DENAR : 33- 36: tygnk CnfC navvd IOVO_DENEY : 33- 36: tygnk CnfC navvd IOVO_DENVD : 33- 36: tygnr CnfC navvd IOVO_DRONO : 33- 36: tynnk CdfC navve IOVO_EUDEL : 32- 35: tysnk CafC naave IOVO_FRAAF : 32- 35: tygnk CnfC navvk IOVO_FRACO : 32- 35: tygnk CnfC navvk IOVO_FRAER : 35- 38: tygnk CnfC navvk IOVO_FRAFR : 32- 35: tyrnk CnfC navve IOVO_FRAPO : 35- 38: tygnk CnfC navve IOVO_FULAT : 33- 36: tysnk CdfC navad IOVO_GEOCA : 33- 36: tygnk CnfC navad IOVO_GRUCA : 33- 36: tysnk CnfC navvd IOVO_GYPCO : 33- 36: tysnk CdfC navvd IOVO_HALIN : 33- 36: tysnk CdfC navvd IOVO_LARRI : 33- 36: tysnk CnfC navvd IOVO_LEIOC : 33- 36: tysnk CgfC navaq IOVO_LOPCA : 35- 38: tyank CnfC navve IOVO_LOPIG : 35- 38: sydnk CnfC navve IOVO_MEGFR : 33- 36: tysnk CsfC navvd IOVO_MELGA : 40- 43: vthse CllC aynie IOVO_MELGA : 105- 108: tydne CvlC ahnle IOVO_MELGA : 164- 167: tygnk CnfC navve IOVO_NOTCI : 32- 35: tyank CafC navve IOVO_NUMME : 33- 36: tydnk CnfC navve IOVO_NYCNY : 33- 36: tysnk CdfC navad IOVO_OREPI : 35- 38: tyank CnfC navve IOVO_ORTVE : 35- 38: tydnk CsfC navvd IOVO_PAVCR : 35- 38: tygnk CnfC navve IOVO_PENJC : 35- 38: tydnk CsfC navvd IOVO_PERPE : 35- 38: tygnk CdfC navve IOVO_PHACO : 35- 38: tygnk CnfC navve IOVO_PHASU : 33- 36: tysnk CnfC navad IOVO_POLBI : 32- 35: tygnk CnfC navvk IOVO_RHEAM : 33- 36: tysnk CdfC navve IOVO_SPHHU : 33- 36: tysnk CnfC navvd IOVO_STRCA : 33- 36: tysnk CnfC navve IOVO_SYRRE : 35- 38: tygnk CnfC navve IOVO_TURSY : 32- 35: tyndk CnfC navve IOVO_TYMCU : 35- 38: tygnk CnfC navve IOVO_VULGR : 33- 36: tysnk CnfC navvd IPS1_RAT : 58- 61: typse CslC fenrk IPS2_RAT : 58- 61: tyane CilC fenrk IPSG_CANFA : 43- 46: tysne CmfC altln IPSG_CANFA : 94- 97: nysnk CsfC navkk IPSG_FELCA : 39- 42: tysne CmfC qlnqn IPSG_FELCA : 90- 93: eysnk ClfC nevvk IPSG_MELME : 47- 50: tysne CmfC mltqn IPSG_MELME : 98- 101: nysnk ClfC navlr IPSG_PANLE : 39- 42: tysne CmfC llnqn IPSG_PANLE : 90- 93: vysnk CsfC nevvk IPSG_VULVU : 43- 46: tysne CmfC altln IPSG_VULVU : 94- 97: nysnk CifC navvr IPST_ANGAN : 40- 43: typne CslC fqrqn IPST_BOVIN : 35- 38: tysne CllC menke IPST_CANFA : 36- 39: tyane CllC lenkk IPST_HUMAN : 58- 61: typne CvlC fenrk IPST_PIG : 35- 38: tysne CvlC senkk IPST_SHEEP : 35- 38: tyane CllC menke LDTI_HIRME : 4- 6: kkv Ca-C pkilk PE60_PIG : 65- 68: tyese CklC larie PSG1_MOUSE : 59- 62: tyane CvlC fenrk THBI_RHOPR : 6- 8: eggep Ca-C phalh THBI_RHOPR : 57- 60: ededv CqeC dgdey D 4: 7.3401 213( 89) K-x(3,5)-C Occurences: 213(89) IAC1_BOVIN : 15- 21: fppdc KvyteaC treyn IAC1_BOVIN : 34- 40: cdsaa KtysneC tfcne IAC2_BOVIN : 11- 17: dcaef KdpkvyC tresn IAC2_BOVIN : 35- 39: etygn Kcaf--C kavmk IAC2_BOVIN : 52- 57: gkinl Khrgk-C IAC2_HUMAN : 30- 36: fglfs KyrtpnC sqyrl IACA_PIG : 3- 7: tr Kqpn--C nvyrs IACA_PIG : 30- 36: cgtng KsyanpC ifcse IACS_PIG : 8- 12: skktr Kepd--C dvyrs IACS_PIG : 35- 41: cgtng KsyanpC ifcse IAC_MACFA : 27- 33: frrfs KyktpfC aryql IAC_MACFA : 29- 33: rfsky Ktpf--C aryql IBD3_HIRME : 8- 14: ecvct KelhrvC gsdgv IOV7_CHICK : 79- 85: ganve KeydgeC rpkhv IOV7_CHICK : 88- 94: gecrp KhvmidC spylq IOV7_CHICK : 144- 150: htnis KlhdgeC kleig IOV7_CHICK : 210- 216: rthvs KkhdgkC rqeip IOV7_CHICK : 211- 216: thvsk Khdgk-C rqeip IOV7_CHICK : 237- 242: kttgg Kllvr-C prill IOV7_CHICK : 276- 282: gtevk KshdgrC kerst IOV7_CHICK : 340- 346: gtsva KkhdgrC reevp IOV7_CHICK : 341- 346: tsvak Khdgr-C reevp IOV7_CHICK : 406- 412: rtnlg KrkngrC eedit IOV7_CHICK : 408- 412: nlgkr Kngr--C eedit IOV7_CHICK : 426- 431: crefq Kvspi-C tmeyv IOVO_ABUPI : 29- 35: cgsdn KtydnkC sfcna IOVO_ABUPI : 34- 38: ktydn Kcsf--C navvd IOVO_ALECH : 27- 33: cgsds KtygnkC nfcna IOVO_ALECH : 32- 36: ktygn Kcnf--C navve IOVO_ANAPL : 27- 33: cgsdn KtygnkC nfcna IOVO_ANAPL : 32- 36: ktygn Kcnf--C navvd IOVO_ANHNO : 27- 33: cgsds KtysnkC nfcna IOVO_ANHNO : 32- 36: ktysn Kcnf--C navvd IOVO_ANSAN : 27- 33: cgsdn KtydnkC nfcna IOVO_ANSAN : 32- 36: ktydn Kcnf--C navvd IOVO_ANSSE : 32- 36: qtysn Kcnf--C navvd IOVO_ARBTO : 26- 32: cgsdn KtygnkC nfcna IOVO_ARBTO : 31- 35: ktygn Kcnf--C navve IOVO_ARGAR : 27- 33: cgsdn KiysnkC dfcna IOVO_ARGAR : 32- 36: kiysn Kcdf--C navle IOVO_BONUM : 29- 35: cgsdn KtygnkC nfcna IOVO_BONUM : 34- 38: ktygn Kcnf--C navve IOVO_BRACA : 27- 33: cgsdn KtygnkC nfcna IOVO_BRACA : 32- 36: ktygn Kcnf--C navvd IOVO_CALSC : 29- 35: cgsdn KtyankC nfcna IOVO_CALSC : 34- 38: ktyan Kcnf--C navve IOVO_CALSP : 29- 35: cgsdn KtyaskC nfcna IOVO_CALSP : 34- 38: ktyas Kcnf--C navve IOVO_CARRE : 32- 36: ityhn Kcyf--C navah IOVO_CASCA : 27- 33: cgsds KtynnkC dfcsa IOVO_CASCA : 32- 36: ktynn Kcdf--C savve IOVO_CERNO : 27- 33: cgsdn KtygnkC nfcna IOVO_CERNO : 32- 36: ktygn Kcnf--C navvd IOVO_CHICK : 41- 46: tdkeg Kdvlv-C nkdlr IOVO_CHICK : 48- 54: vlvcn KdlrpiC gtdgv IOVO_CHICK : 80- 86: gtnis KehdgeC ketvp IOVO_CHICK : 106- 111: tsedg Kvmvl-C nrafn IOVO_CHICK : 145- 151: gasvd KrhdggC rkela IOVO_CHICK : 183- 189: cgsdn KtygnkC nfcna IOVO_CHICK : 188- 192: ktygn Kcnf--C navve IOVO_CHRAM : 29- 35: cgsdn KtygnkC nfcna IOVO_CHRAM : 34- 38: ktygn Kcnf--C navve IOVO_CIRAE : 27- 33: cgsds KtysnkC dfcna IOVO_CIRAE : 32- 36: ktysn Kcdf--C nafvd IOVO_COLVI : 29- 35: cgsdn KtyvnkC nfcna IOVO_COLVI : 34- 38: ktyvn Kcnf--C navve IOVO_COSCO : 27- 33: cgsdn KtygnkC nfcna IOVO_COSCO : 32- 36: ktygn Kcnf--C navvd IOVO_COTDE : 14- 20: kpacp KdyrpvC gsdnk IOVO_COTDE : 25- 31: cgsdn KtygnkC nfcna IOVO_COTDE : 30- 34: ktygn Kcnf--C navve IOVO_COTJA : 17- 22: tneeg Kdevv-C pdelr IOVO_COTJA : 56- 62: gtnis KeqdgeC getvp IOVO_COTJA : 82- 87: tsedg Kvtil-C tkdfs IOVO_COTJA : 89- 95: tilct KdfsfvC gtdgv IOVO_COTJA : 121- 127: gtsvg KkhdgeC rkela IOVO_COTJA : 122- 127: tsvgk Khdge-C rkela IOVO_COTJA : 148- 154: kpacp KdyrpvC gsdnk IOVO_COTJA : 159- 165: cgsdn KtysnkC nfcna IOVO_COTJA : 164- 168: ktysn Kcnf--C navve IOVO_CYGAT : 27- 33: cgsdn KtygnkC nfcna IOVO_CYGAT : 32- 36: ktygn Kcnf--C navvd IOVO_CYRMO : 29- 35: cgsdn KtygnkC nfcna IOVO_CYRMO : 34- 38: ktygn Kcnf--C navve IOVO_DACNO : 28- 34: cgsds KtysnkC dfcna IOVO_DACNO : 33- 37: ktysn Kcdf--C navmd IOVO_DENAR : 27- 33: cgsdn KtygnkC nfcna IOVO_DENAR : 32- 36: ktygn Kcnf--C navvd IOVO_DENEY : 27- 33: cgsdn KtygnkC nfcna IOVO_DENEY : 32- 36: ktygn Kcnf--C navvd IOVO_DENVD : 27- 33: cgsdn KtygnrC nfcna IOVO_DRONO : 27- 33: cgsds KtynnkC dfcna IOVO_DRONO : 32- 36: ktynn Kcdf--C navve IOVO_EUDEL : 31- 35: qtysn Kcaf--C naave IOVO_FRAAF : 31- 35: itygn Kcnf--C navvk IOVO_FRACO : 31- 35: itygn Kcnf--C navvk IOVO_FRAER : 34- 38: itygn Kcnf--C navvk IOVO_FRAFR : 26- 32: cgsdn KtyrnkC nfcna IOVO_FRAFR : 31- 35: ktyrn Kcnf--C navve IOVO_FRAPO : 29- 35: cgsdn KtygnkC nfcna IOVO_FRAPO : 34- 38: ktygn Kcnf--C navve IOVO_FULAT : 27- 33: cgsdn KtysnkC dfcna IOVO_FULAT : 32- 36: ktysn Kcdf--C navad IOVO_GEOCA : 27- 33: cgsdn KtygnkC nfcna IOVO_GEOCA : 32- 36: ktygn Kcnf--C navad IOVO_GRUCA : 27- 33: cgsds KtysnkC nfcna IOVO_GRUCA : 32- 36: ktysn Kcnf--C navvd IOVO_GYPCO : 27- 33: cgsds KtysnkC dfcna IOVO_GYPCO : 32- 36: ktysn Kcdf--C navvd IOVO_HALIN : 27- 33: cgsds KtysnkC dfcna IOVO_HALIN : 32- 36: ktysn Kcdf--C navvd IOVO_LARRI : 27- 33: cgsds KtysnkC nfcna IOVO_LARRI : 32- 36: ktysn Kcnf--C navvd IOVO_LEIOC : 32- 36: qtysn Kcgf--C navaq IOVO_LOPCA : 29- 35: cgsdn KtyankC nfcna IOVO_LOPCA : 34- 38: ktyan Kcnf--C navve IOVO_LOPIG : 29- 35: cgsdn KsydnkC nfcna IOVO_LOPIG : 34- 38: ksydn Kcnf--C navve IOVO_MEGFR : 32- 36: qtysn Kcsf--C navvd IOVO_MELGA : 17- 22: tneeg Kdvlv-C tedlr IOVO_MELGA : 55- 61: gtnis KehdgeC reavp IOVO_MELGA : 81- 86: tseeg Kvmil-C nkaln IOVO_MELGA : 88- 94: milcn KalnpvC gtdgv IOVO_MELGA : 120- 126: gtsvg KkhdgeC rkela IOVO_MELGA : 121- 126: tsvgk Khdge-C rkela IOVO_MELGA : 158- 164: cgsdn KtygnkC nfcna IOVO_MELGA : 163- 167: ktygn Kcnf--C navve IOVO_NOTCI : 31- 35: qtyan Kcaf--C navve IOVO_NUMME : 27- 33: cgsdn KtydnkC nfcna IOVO_NUMME : 32- 36: ktydn Kcnf--C navve IOVO_NYCNY : 27- 33: cgsds KtysnkC dfcna IOVO_NYCNY : 32- 36: ktysn Kcdf--C navad IOVO_OREPI : 29- 35: cgsds KtyankC nfcna IOVO_OREPI : 34- 38: ktyan Kcnf--C navve IOVO_ORTVE : 29- 35: cgsdn KtydnkC sfcna IOVO_ORTVE : 34- 38: ktydn Kcsf--C navvd IOVO_PAVCR : 29- 35: cgsdn KtygnkC nfcna IOVO_PAVCR : 34- 38: ktygn Kcnf--C navve IOVO_PENJC : 29- 35: cgsdn KtydnkC sfcna IOVO_PENJC : 34- 38: ktydn Kcsf--C navvd IOVO_PERPE : 29- 35: cgsdn KtygnkC dfcna IOVO_PERPE : 34- 38: ktygn Kcdf--C navve IOVO_PHACO : 29- 35: cgsdn KtygnkC nfcna IOVO_PHACO : 34- 38: ktygn Kcnf--C navve IOVO_PHASU : 27- 33: cgsds KtysnkC nfcna IOVO_PHASU : 32- 36: ktysn Kcnf--C navad IOVO_POLBI : 31- 35: etygn Kcnf--C navvk IOVO_RHEAM : 27- 33: cgsds KtysnkC dfcna IOVO_RHEAM : 32- 36: ktysn Kcdf--C navve IOVO_SPHHU : 27- 33: cgsds KtysnkC nfcna IOVO_SPHHU : 32- 36: ktysn Kcnf--C navvd IOVO_STRCA : 27- 33: cgsds KtysnkC nfcna IOVO_STRCA : 32- 36: ktysn Kcnf--C navve IOVO_SYRRE : 29- 35: cgsdn KtygnkC nfcna IOVO_SYRRE : 34- 38: ktygn Kcnf--C navve IOVO_TURSY : 26- 32: cgsdn KtyndkC nfcna IOVO_TURSY : 31- 35: ktynd Kcnf--C navve IOVO_TYMCU : 29- 35: cgsdn KtygnkC nfcna IOVO_TYMCU : 34- 38: ktygn Kcnf--C navve IOVO_VULGR : 27- 33: cgsds KtysnkC nfcna IOVO_VULGR : 32- 36: ktysn Kcnf--C navvd IPS1_RAT : 28- 32: aevng Ktpn--C pkqim IPS1_RAT : 34- 39: tpncp Kqimg-C priyd IPS2_RAT : 28- 32: akvig Kkan--C pntlv IPS2_RAT : 52- 58: cgtdg KtyaneC ilcfe IPSG_CANFA : 18- 24: snykg KgsqiaC prlhq IPSG_CANFA : 37- 43: cgtdh KtysneC mfcal IPSG_CANFA : 58- 64: kfevr KlqdtaC diect IPSG_CANFA : 88- 94: cgsdg KnysnkC sfcna IPSG_CANFA : 93- 97: knysn Kcsf--C navkk IPSG_CANFA : 111- 115: tifla Khge--C IPSG_FELCA : 14- 20: sqynr KgsgitC skewk IPSG_FELCA : 22- 28: gitcs KewkpiC gidhk IPSG_FELCA : 33- 39: cgidh KtysneC mfcql IPSG_FELCA : 54- 60: rfqlr KlhdnkC qiect IPSG_FELCA : 59- 64: klhdn Kcqie-C tnysa IPSG_FELCA : 89- 93: qeysn Kclf--C nevvk IPSG_FELCA : 107- 111: tlfla Kygq--C IPSG_MELME : 22- 28: skyna KgsqfaC srhld IPSG_MELME : 97- 101: nnysn Kclf--C navlr IPSG_MELME : 115- 119: alfla Khgq--C esp IPSG_PANLE : 14- 20: sqynr KgsgiaC skqlk IPSG_PANLE : 22- 28: giacs KqlkpiC gidhk IPSG_PANLE : 33- 39: cgidh KtysneC mfcll IPSG_PANLE : 54- 60: qfqir KlyddkC qiect IPSG_PANLE : 59- 64: klydd Kcqie-C tnysa IPSG_PANLE : 84- 90: cgsdg KvysnkC sfcne IPSG_PANLE : 89- 93: kvysn Kcsf--C nevvk IPSG_PANLE : 107- 111: tlfla Kygq--C k IPSG_VULVU : 18- 24: ssykg KgsqiaC prhlq IPSG_VULVU : 58- 64: efevr KlqdtaC diect IPSG_VULVU : 88- 94: cgsdg KnysnkC ifcna IPSG_VULVU : 93- 97: knysn Kcif--C navvr IPSG_VULVU : 111- 115: tifla Khge--C IPST_ANGAN : 57- 61: dilit Kddr--C IPST_BOVIN : 52- 56: pvliq Ksgp--C IPST_CANFA : 13- 17: ancnl Kvng--C nkiyn IPST_CANFA : 19- 25: vngcn KiynpiC gsdgi IPST_CANFA : 53- 57: silve Ksgp--C IPST_HUMAN : 41- 47: lngct KiydpvC gtdgn IPST_HUMAN : 75- 79: siliq Ksgp--C IPST_PIG : 18- 24: vsgcp KiynpvC gtdgi IPST_PIG : 52- 56: pvliq Ksgp--C IPST_SHEEP : 52- 56: pvliq Ksgp--C LDTI_HIRME : 1- 6: Kkvca-C pkilk LDTI_HIRME : 2- 6: k Kvca--C pkilk LDTI_HIRME : 8- 14: vcacp KilkpvC gsdgr LDTI_HIRME : 35- 40: ngvsi Ksegs-C ptgil PE60_PIG : 82- 86: diqiv Kdge--C PSG1_MOUSE : 29- 33: akvtg Keas--C hdava PSG1_MOUSE : 76- 80: pvlir Kggp--C THBI_RHOPR : 42- 48: kpelv KvhdgpC epded THBI_RHOPR : 96- 101: pgvel Khegp-C rt Number of patterns evaluated by Pratt:5 Total running time: 1 seconds