------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 10 sequences from file IPNS_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 10 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename IPNS_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CEFE_STRCL 311 EXPA_CEPAC 332 IPNS_CEPAC 338 IPNS_EMENI 331 IPNS_FLASS 326 IPNS_NOCLA 328 IPNS_PENCH 331 IPNS_STRCL 329 IPNS_STRJU 329 IPNS_STRLP 333 Pratt run started at Thu Feb 6 20:07:31 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 32.8604 11( 10) L-x(4,5)-H-x-D-x-S-x(2)-T-x(3)-Q-x(4)-N-x(2)-V 2: 32.8604 10( 10) L-x(3,4)-H-x-D-x-S-x(2)-T-x(3)-Q-x(4)-N-x(2)-V 3: 28.6904 11( 10) H-x(1,2)-D-x-S-x(2)-T-x(3)-Q-x(4)-N-x(2)-V 4: 28.6904 10( 10) H-x(0,1)-D-x-S-x(2)-T-x(3)-Q-x(4)-N-x(2)-V 5: 28.1904 10( 10) L-x(4)-H-x-D-x-S-x(2)-T-x(0,1)-L-x(1,2)-Q 6: 24.0203 10( 10) H-x-D-x-S-x(2)-T-x(0,1)-L-x(1,2)-Q 7: 20.8503 10( 10) S-x(2)-T-x(3)-Q-x(4)-N-x(2)-V 8: 20.8503 10( 10) D-x(4)-T-x(3)-Q-x(4)-N-x(2)-V 9: 20.3503 10( 10) S-x(1,2)-T-x(3)-Q-x(4)-N-x(2)-V 10: 20.3503 10( 10) D-x(3,4)-T-x(3)-Q-x(4)-N-x(2)-V 11: 19.8503 10( 10) T-x(0,1)-L-x(1,2)-Q-x(4)-N-x(2)-V 12: 19.3503 10( 10) P-x-H-x-V-x(2,3)-P-x(0,2)-D 13: 16.6802 10( 10) R-x-S-x(2)-F-F 14: 16.6802 10( 10) G-x-F-Y-x(4)-G 15: 16.1802 10( 10) L-x(2)-E-x(3)-D-x(0,1)-V 16: 16.1802 10( 10) L-x(1,2)-Q-x(4)-N-x(2)-V 17: 15.6802 11( 10) A-x(0,1)-R-x(1,2)-G-F 18: 15.6802 11( 10) A-x(3,4)-G-x(0,1)-F-x(5)-G 19: 15.6802 10( 10) S-x(3)-L-x-P-x(2,4)-D 20: 15.6802 14( 10) A-x(0,2)-P-x-H-x-V Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 84.5594 10( 10) L-[RS]-[FM]-[AEG]-x-H-x-D-[LV]-S-x-[IV]-T-x(0,1)-L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY] B 2: 81.8286 11( 10) H-x(1,2)-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] C 3: 81.8286 10( 10) H-x(0,1)-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] D 4: 80.7280 10( 10) L-x(3,4)-H-x-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG] E 5: 79.6531 10( 10) H-x-D-[LV]-S-x-[IV]-T-x(0,1)-L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] F 6: 77.5579 11( 10) L-x(4,5)-H-x-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY] G 7: 67.5799 10( 10) S-x(2)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] H 8: 67.5799 10( 10) D-x(4)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] I 9: 67.0799 10( 10) S-x(1,2)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] J 10: 67.0799 10( 10) D-x(3,4)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] K 11: 60.7343 10( 10) T-x(0,1)-L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] L 12: 57.0643 10( 10) L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] M 13: 29.5918 10( 10) G-[FIL]-F-Y-[AL]-[ASTV]-x(2)-G-[ILV]-[DNTV] N 14: 28.3231 10( 10) P-x-H-[EHR]-V-x(2,3)-P-x(0,2)-D-[EQ]-x(3)-[PS] O 15: 27.4100 10( 10) S-x(2)-[FY]-L-[NR]-P-x(2,4)-D-[FH]-[APST] P 16: 25.1778 10( 10) L-[AS]-x-E-x(3)-D-x(0,1)-V-[ES]-x(2)-[GPT] Q 17: 24.8635 11( 10) A-x(3,4)-G-x(0,1)-F-x-[ALV]-[ASTV]-x(2)-G-x-[DNTV]-x(4)-[DQST] R 18: 22.0634 10( 10) R-x-S-x-[PV]-F-F-x(2)-[AGLP] S 19: 18.2831 14( 10) A-x(0,2)-P-x-H-[EHR]-V T 20: 16.6802 10( 10) G-x-F-Y-x(4)-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 84.5594 10( 10) L-[RS]-[FM]-[AEG]-x-H-x-D-[LV]-S-x-[IV]-T-x(0,1)-L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY] Occurences: 10(10) CEFE_STRCL : 178- 225: aeeqp LRMApHyDLSmVT-LiqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVF cgaia EXPA_CEPAC : 179- 226: aeeep LRMGpHyDLStIT-LvhQTacaNGfVslqcEvdGefvDlPtlPgAmVVF cgavg IPNS_CEPAC : 211- 258: ddgtk LSFEwHeDVSlITvLy-QSdvqNLqVktpqGwqDiqaDdTgfLiNcGSY mahit IPNS_EMENI : 209- 256: adgtk LSFEwHeDVSlITvLy-QSnvqNLqVetaaGyqDieaDdTgyLiNcGSY mahlt IPNS_FLASS : 204- 251: pdgek LSFEhHqDVSlITvLy-QTaipNLqVetaeGylDipvSdEhfLvNcGTY mahit IPNS_NOCLA : 205- 252: pdgek LSFEdHfDVSmITvLy-QTqvqNLqVetvdGwrDlptSdTdfLvNaGTY lghlt IPNS_PENCH : 209- 256: edgtk LSFEwHeDVSlITvLy-QSdvaNLqVempqGylDieaDdNayLvNcGSY mahit IPNS_STRCL : 207- 254: pdgql LSFEdHlDVSmITvLf-QTqvqNLqVetvdGwrDiptSeNdfLvNcGTY mahvt IPNS_STRJU : 207- 254: adgtk LSFEdHlDVSmITvLy-QTevqNLqVetvdGwqDiprSdEdfLvNcGTY mghit IPNS_STRLP : 211- 258: pdgtr LSFEdHlDVSmITvLf-QTevqNLqVetvdGwqSlptSgEnfLiNcGTY lgylt B 2: 81.8286 11( 10) H-x(1,2)-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 11(10) CEFE_STRCL : 183- 230: lrmap Hy-DLSmVTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 184- 231: lrmgp Hy-DLStITLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 216- 263: lsfew He-DVSlITVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 214- 261: lsfew He-DVSlITVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 208- 256: klsfe HhqDVSlITVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_FLASS : 209- 256: lsfeh Hq-DVSlITVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 210- 257: lsfed Hf-DVSmITVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 214- 261: lsfew He-DVSlITVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 212- 259: lsfed Hl-DVSmITVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 212- 259: lsfed Hl-DVSmITVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 216- 263: lsfed Hl-DVSmITVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp C 3: 81.8286 10( 10) H-x(0,1)-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 183- 230: lrmap HyDLSmVTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 184- 231: lrmgp HyDLStITLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 216- 263: lsfew HeDVSlITVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 214- 261: lsfew HeDVSlITVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 209- 256: lsfeh HqDVSlITVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 210- 257: lsfed HfDVSmITVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 214- 261: lsfew HeDVSlITVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 212- 259: lsfed HlDVSmITVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 212- 259: lsfed HlDVSmITVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 216- 263: lsfed HlDVSmITVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp D 4: 80.7280 10( 10) L-x(3,4)-H-x-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG] Occurences: 10(10) CEFE_STRCL : 178- 227: aeeqp LrmapHyDLSmVTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcG aiatl EXPA_CEPAC : 179- 228: aeeep LrmgpHyDLStITLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcG avgtl IPNS_CEPAC : 211- 260: ddgtk LsfewHeDVSlITVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmA hitdd IPNS_EMENI : 209- 258: adgtk LsfewHeDVSlITVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmA hltnn IPNS_FLASS : 204- 253: pdgek LsfehHqDVSlITVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmA hitng IPNS_NOCLA : 205- 254: pdgek LsfedHfDVSmITVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlG hltnd IPNS_PENCH : 209- 258: edgtk LsfewHeDVSlITVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmA hitnn IPNS_STRCL : 207- 256: pdgql LsfedHlDVSmITVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmA hvtnd IPNS_STRJU : 207- 256: adgtk LsfedHlDVSmITVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmG hithd IPNS_STRLP : 211- 260: pdgtr LsfedHlDVSmITVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlG yltnd E 5: 79.6531 10( 10) H-x-D-[LV]-S-x-[IV]-T-x(0,1)-L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 183- 230: lrmap HyDLSmVT-LiqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 184- 231: lrmgp HyDLStIT-LvhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 216- 263: lsfew HeDVSlITvLy-QSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 214- 261: lsfew HeDVSlITvLy-QSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 209- 256: lsfeh HqDVSlITvLy-QTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 210- 257: lsfed HfDVSmITvLy-QTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 214- 261: lsfew HeDVSlITvLy-QSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 212- 259: lsfed HlDVSmITvLf-QTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 212- 259: lsfed HlDVSmITvLy-QTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 216- 263: lsfed HlDVSmITvLf-QTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp F 6: 77.5579 11( 10) L-x(4,5)-H-x-D-[LV]-S-x-[IV]-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY] Occurences: 11(10) CEFE_STRCL : 178- 225: aeeqp Lrmap-HyDLSmVTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVF cgaia EXPA_CEPAC : 179- 226: aeeep Lrmgp-HyDLStITLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVF cgavg IPNS_CEPAC : 211- 258: ddgtk Lsfew-HeDVSlITVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSY mahit IPNS_EMENI : 209- 256: adgtk Lsfew-HeDVSlITVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSY mahlt IPNS_FLASS : 204- 251: pdgek Lsfeh-HqDVSlITVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTY mahit IPNS_NOCLA : 205- 252: pdgek Lsfed-HfDVSmITVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTY lghlt IPNS_PENCH : 209- 256: edgtk Lsfew-HeDVSlITVLyQSdvaNLqVempqGylDieaDdNayLvNcGSY mahit IPNS_STRCL : 206- 254: gpdgq LlsfedHlDVSmITVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTY mahvt IPNS_STRCL : 207- 254: pdgql Lsfed-HlDVSmITVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTY mahvt IPNS_STRJU : 207- 254: adgtk Lsfed-HlDVSmITVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTY mghit IPNS_STRLP : 211- 258: pdgtr Lsfed-HlDVSmITVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTY lgylt G 7: 67.5799 10( 10) S-x(2)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 187- 230: phydl SmvTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 188- 231: phydl StiTLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 220- 263: whedv SliTVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 218- 261: whedv SliTVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 213- 256: hhqdv SliTVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 214- 257: dhfdv SmiTVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 218- 261: whedv SliTVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 216- 259: dhldv SmiTVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 216- 259: dhldv SmiTVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 220- 263: dhldv SmiTVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp H 8: 67.5799 10( 10) D-x(4)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 185- 230: maphy DlsmvTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 186- 231: mgphy DlstiTLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 218- 263: fewhe DvsliTVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 216- 261: fewhe DvsliTVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 211- 256: fehhq DvsliTVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 212- 257: fedhf DvsmiTVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 216- 261: fewhe DvsliTVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 214- 259: fedhl DvsmiTVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 214- 259: fedhl DvsmiTVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 218- 263: fedhl DvsmiTVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp I 9: 67.0799 10( 10) S-x(1,2)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 187- 230: phydl SmvTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 188- 231: phydl StiTLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 220- 263: whedv SliTVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 218- 261: whedv SliTVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 213- 256: hhqdv SliTVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 214- 257: dhfdv SmiTVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 218- 261: whedv SliTVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 216- 259: dhldv SmiTVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 216- 259: dhldv SmiTVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 220- 263: dhldv SmiTVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp J 10: 67.0799 10( 10) D-x(3,4)-T-[LV]-[ILV]-x-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 185- 230: maphy DlsmvTLIqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 186- 231: mgphy DlstiTLVhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 218- 263: fewhe DvsliTVLyQSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 216- 261: fewhe DvsliTVLyQSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 211- 256: fehhq DvsliTVLyQTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 212- 257: fedhf DvsmiTVLyQTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 216- 261: fewhe DvsliTVLyQSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 214- 259: fedhl DvsmiTVLfQTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 214- 259: fedhl DvsmiTVLyQTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 218- 263: fedhl DvsmiTVLfQTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp K 11: 60.7343 10( 10) T-x(0,1)-L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 190- 230: dlsmv T-LiqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 191- 231: dlsti T-LvhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 223- 263: dvsli TvLy-QSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 221- 261: dvsli TvLy-QSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 216- 256: dvsli TvLy-QTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 217- 257: dvsmi TvLy-QTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 221- 261: dvsli TvLy-QSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 219- 259: dvsmi TvLf-QTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 219- 259: dvsmi TvLy-QTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 223- 263: dvsmi TvLf-QTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp L 12: 57.0643 10( 10) L-x(1,2)-Q-[ST]-x(3)-N-[GL]-x-V-x(4)-[EG]-x(2)-[DGS]-x(3)-[DS]-x-[ENPT]-x(2)-[LP]-x-[AN]-x-[GLV]-[STV]-[FY]-x-[AG]-x-[ILV]-[AGT] Occurences: 10(10) CEFE_STRCL : 191- 230: lsmvt LiqQTpcaNGfVslqaEvgGaftDlPyrPdAvLVFcGaIA tlvtg EXPA_CEPAC : 192- 231: lstit LvhQTacaNGfVslqcEvdGefvDlPtlPgAmVVFcGaVG tlatg IPNS_CEPAC : 225- 263: slitv Ly-QSdvqNLqVktpqGwqDiqaDdTgfLiNcGSYmAhIT ddyyp IPNS_EMENI : 223- 261: slitv Ly-QSnvqNLqVetaaGyqDieaDdTgyLiNcGSYmAhLT nnyyk IPNS_FLASS : 218- 256: slitv Ly-QTaipNLqVetaeGylDipvSdEhfLvNcGTYmAhIT ngyyp IPNS_NOCLA : 219- 257: smitv Ly-QTqvqNLqVetvdGwrDlptSdTdfLvNaGTYlGhLT ndyfp IPNS_PENCH : 223- 261: slitv Ly-QSdvaNLqVempqGylDieaDdNayLvNcGSYmAhIT nnyyp IPNS_STRCL : 221- 259: smitv Lf-QTqvqNLqVetvdGwrDiptSeNdfLvNcGTYmAhVT ndyfp IPNS_STRJU : 221- 259: smitv Ly-QTevqNLqVetvdGwqDiprSdEdfLvNcGTYmGhIT hdyfp IPNS_STRLP : 225- 263: smitv Lf-QTevqNLqVetvdGwqSlptSgEnfLiNcGTYlGyLT ndyfp M 13: 29.5918 10( 10) G-[FIL]-F-Y-[AL]-[ASTV]-x(2)-G-[ILV]-[DNTV] Occurences: 10(10) CEFE_STRCL : 30- 40: clrdk GLFYLTdcGLT dtelk EXPA_CEPAC : 30- 40: avttk GIFYLTesGLV dddht IPNS_CEPAC : 42- 52: asrdt GFFYAVnhGVD lpwls IPNS_EMENI : 40- 50: asrdt GFFYAVnhGIN vqrls IPNS_FLASS : 38- 48: acrgs GFFYAAnhGVD laalq IPNS_NOCLA : 39- 49: acrgs GFFYAAnhGVD vqrlq IPNS_PENCH : 40- 50: asrdt GFFYAVnhGVD vkrls IPNS_STRCL : 41- 51: acrgs GFFYATnhGVD vqqlq IPNS_STRJU : 41- 51: aargs GFFYASnhGVD vqllq IPNS_STRLP : 41- 51: acrgs GFFYAShhGID vrrlq N 14: 28.3231 10( 10) P-x-H-[EHR]-V-x(2,3)-P-x(0,2)-D-[EQ]-x(3)-[PS] Occurences: 10(10) CEFE_STRCL : 241- 256: gqvka PrHHVaa-PrrDQiagS srtss EXPA_CEPAC : 242- 257: gkvka PkHRVks-PgrDQrvgS srtss IPNS_CEPAC : 124- 138: ikept PmHEVnvwP--DEakhP gfraf IPNS_EMENI : 122- 136: iqakt PtHEVnvwP--DEtkhP gfqdf IPNS_FLASS : 119- 133: ikagl PsHEVniwP--DEarhP gmrrf IPNS_NOCLA : 120- 134: ikagt PmHEVnswP--DEekhP sfrpf IPNS_PENCH : 122- 136: iqskt PtHEVnvwP--DEkkhP gfref IPNS_STRCL : 122- 136: iaagt PmHEVnlwP--DEerhP rfrpf IPNS_STRJU : 122- 136: ikset PmHEVnlwP--DEekhP rfrpf IPNS_STRLP : 122- 136: ikagt PmHEVnvwP--DEerhP dfrsf O 15: 27.4100 10( 10) S-x(2)-[FY]-L-[NR]-P-x(2,4)-D-[FH]-[APST] Occurences: 10(10) CEFE_STRCL : 261- 272: ssrts SvfFLRPna--DFT fsvpl EXPA_CEPAC : 262- 273: ssrts SvfFLRPkp--DFS fnvqq IPNS_CEPAC : 104- 117: kkave SfcYLNPsfspDHP rikep IPNS_EMENI : 102- 115: kkave SfcYLNPnftpDHP riqak IPNS_FLASS : 99- 112: kkane SfcYLNPsfdaDHA tikag IPNS_NOCLA : 100- 113: kkave SfcYLNPsfseDHP eikag IPNS_PENCH : 102- 115: kkave SfcYLNPnfkpDHP liqsk IPNS_STRCL : 102- 115: rkave SfcYLNPdfgeDHP miaag IPNS_STRJU : 102- 115: kkave SfcYLNPsfsdDHP mikse IPNS_STRLP : 102- 115: rktve SwcYLNPsfgeDHP mikag P 16: 25.1778 10( 10) L-[AS]-x-E-x(3)-D-x(0,1)-V-[ES]-x(2)-[GPT] Occurences: 10(10) CEFE_STRCL : 277- 289: tfsvp LArEcgfD-VSldG etatf EXPA_CEPAC : 145- 158: svgap LAgEdidDfVEcdP llrlr IPNS_CEPAC : 211- 223: ddgtk LSfEwheD-VSliT vlyqs IPNS_EMENI : 209- 221: adgtk LSfEwheD-VSliT vlyqs IPNS_FLASS : 204- 216: pdgek LSfEhhqD-VSliT vlyqt IPNS_NOCLA : 205- 217: pdgek LSfEdhfD-VSmiT vlyqt IPNS_PENCH : 209- 221: edgtk LSfEwheD-VSliT vlyqs IPNS_STRCL : 207- 219: pdgql LSfEdhlD-VSmiT vlfqt IPNS_STRJU : 207- 219: adgtk LSfEdhlD-VSmiT vlyqt IPNS_STRLP : 211- 223: pdgtr LSfEdhlD-VSmiT vlfqt Q 17: 24.8635 11( 10) A-x(3,4)-G-x(0,1)-F-x-[ALV]-[ASTV]-x(2)-G-x-[DNTV]-x(4)-[DQST] Occurences: 11(10) CEFE_STRCL : 278- 296: fsvpl Arec-G-FdVSldGeTatfqD wiggn EXPA_CEPAC : 25- 45: telae AvttkGiFyLTesGlVdddhT saret IPNS_CEPAC : 37- 57: raida AsrdtGfFyAVnhGvDlpwlS retnk IPNS_EMENI : 35- 55: qqida AsrdtGfFyAVnhGiNvqrlS qktke IPNS_FLASS : 33- 53: aridr AcrgsGfFyAAnhGvDlaalQ kfttd IPNS_NOCLA : 34- 54: qeink AcrgsGfFyAAnhGvDvqrlQ dvvne IPNS_PENCH : 35- 55: raida AsrdtGfFyAVnhGvDvkrlS nktre IPNS_STRCL : 36- 56: eeihg AcrgsGfFyATnhGvDvqqlQ dvvne IPNS_STRJU : 36- 56: qeink AargsGfFyASnhGvDvqllQ dvvne IPNS_STRJU : 37- 56: einka Args-GfFyASnhGvDvqllQ dvvne IPNS_STRLP : 36- 56: rqine AcrgsGfFyAShhGiDvrrlQ dvvne R 18: 22.0634 10( 10) R-x-S-x-[PV]-F-F-x(2)-[AGLP] Occurences: 10(10) CEFE_STRCL : 258- 267: iagss RtSsVFFlrP nadft EXPA_CEPAC : 259- 268: rvgss RtSsVFFlrP kpdfs IPNS_CEPAC : 281- 290: wvnee RqSlPFFvnL gwedt IPNS_EMENI : 279- 288: wvnae RqSlPFFvnL gydsv IPNS_FLASS : 274- 283: yinae RlSiPFFanL shasa IPNS_NOCLA : 275- 284: fvnae RlSlPFFfhA gqhtl IPNS_PENCH : 279- 288: wvnee RqSlPFFvnL gfndt IPNS_STRCL : 277- 286: fvnae RlSlPFFlnG gheav IPNS_STRJU : 277- 286: finae RlSlPFFlnA ghnsv IPNS_STRLP : 281- 290: yvnae RlSlPFFlhA gqnsv S 19: 18.2831 14( 10) A-x(0,2)-P-x-H-[EHR]-V Occurences: 14(10) CEFE_STRCL : 240- 245: ggqvk A--PrHHV aaprr EXPA_CEPAC : 241- 246: ggkvk A--PkHRV kspgr IPNS_CEPAC : 269- 274: ddyyp A--PiHRV kwvne IPNS_EMENI : 119- 126: hpriq AktPtHEV nvwpd IPNS_EMENI : 267- 272: nnyyk A--PiHRV kwvna IPNS_FLASS : 116- 123: hatik AglPsHEV niwpd IPNS_FLASS : 262- 267: ngyyp A--PvHRV kyina IPNS_NOCLA : 117- 124: hpeik AgtPmHEV nswpd IPNS_PENCH : 267- 272: nnyyp A--PiHRV kwvne IPNS_STRCL : 119- 126: hpmia AgtPmHEV nlwpd IPNS_STRCL : 265- 270: ndyfp A--PnHRV kfvna IPNS_STRJU : 265- 270: hdyfp A--PnHRV kfina IPNS_STRLP : 119- 126: hpmik AgtPmHEV nvwpd IPNS_STRLP : 269- 274: ndyfp A--PnHRV kyvna T 20: 16.6802 10( 10) G-x-F-Y-x(4)-G Occurences: 10(10) CEFE_STRCL : 30- 38: clrdk GlFYltdcG ltdte EXPA_CEPAC : 30- 38: avttk GiFYltesG lvddd IPNS_CEPAC : 42- 50: asrdt GfFYavnhG vdlpw IPNS_EMENI : 40- 48: asrdt GfFYavnhG invqr IPNS_FLASS : 38- 46: acrgs GfFYaanhG vdlaa IPNS_NOCLA : 39- 47: acrgs GfFYaanhG vdvqr IPNS_PENCH : 40- 48: asrdt GfFYavnhG vdvkr IPNS_STRCL : 41- 49: acrgs GfFYatnhG vdvqq IPNS_STRJU : 41- 49: aargs GfFYasnhG vdvql IPNS_STRLP : 41- 49: acrgs GfFYashhG idvrr Number of patterns evaluated by Pratt:5005 Total running time: 4 seconds