------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 2 sequences from file INTERLEUKIN_7 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 2 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename INTERLEUKIN_7.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: IL7_HUMAN 177 IL7_MOUSE 154 Pratt run started at Thu Feb 6 20:07:16 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 136.6117 2( 2) N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S-x-G-T 2: 136.6117 2( 2) N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S-x-G 3: 136.6117 2( 2) C-x-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S 4: 136.6117 2( 2) N-C-x-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V 5: 136.6117 2( 2) S-N-C-x-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L 6: 132.9416 2( 2) I-D-x-L-x(0,1)-D-x-M-x(4)-S-N-C-x-N-N-E-x-N-F-F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M 7: 132.9416 2( 2) S-I-D-x-L-x(0,1)-D-x-M-x(4)-S-N-C-x-N-N-E-x-N-F-F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K 8: 132.4416 2( 2) H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-x(2)-H-L-L-x-V-S-x-G-T-x(2)-L-x-N-C-T 9: 132.4416 2( 2) N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S-x-G-T-x(2)-L 10: 132.4416 2( 2) E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S-x-G-T 11: 132.4416 2( 2) D-x(0,1)-L-x(0,1)-D-x-M-x(4)-S-N-C-x-N-N-E-x-N-F-F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N 12: 131.4416 2( 2) L-D-x(0,2)-K-x(2)-G-x(0,2)-S-N-C-x-N-N-E-x-N-F-F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N 13: 129.2716 2( 2) S-x(3)-I-F-G-x-P-P-L-I-L-V-L-L-P-V-x-S-S-x-C-x-I-x(2)-K-x-G-K-x-Y-E-S-V-L-M-x-S-I-D-x-L 14: 128.2716 2( 2) C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-x(2)-H-L-L-x-V-S-x-G-T-x(2)-L-x-N-C-T 15: 128.2716 2( 2) F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S-x-G-T-x(2)-L-x-N 16: 128.2716 2( 2) F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-x(2)-H-L-L-x-V-S-x-G-T-x(2)-L-x-N 17: 128.2716 2( 2) F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F-x(2)-H-L-L-x-V-S-x-G-T-x(2)-L 18: 128.2716 2( 2) M-x(4)-S-N-C-x-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N-x(4)-F 19: 127.7716 3( 2) I-x(0,2)-D-x-L-x(0,1)-D-x-M-x(4)-S-N-C-x-N-N-E-x-N-F-F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K 20: 127.2716 2( 2) D-x-M-x(1,3)-G-x(0,2)-S-N-C-x-N-N-E-x-N-F-F-x(2)-H-x-C-D-x(2)-K-E-x(2)-F-L-x-R-A-A-R-K-L-x-Q-F-L-K-M-N Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 171.8351 2( 2) C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S B 2: 171.8351 2( 2) N-C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V C 3: 171.8351 2( 2) S-N-C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L D 4: 171.7996 2( 2) N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T E 5: 171.7996 2( 2) N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G F 6: 170.8315 2( 2) N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L G 7: 169.8452 2( 2) F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N H 8: 168.3792 2( 2) I-D-[EQ]-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M I 9: 168.3792 2( 2) S-I-D-[EQ]-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K J 10: 167.6295 2( 2) E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T K 11: 166.7669 2( 2) F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N L 12: 166.6614 2( 2) F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L M 13: 164.6973 2( 2) D-x(0,1)-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N N 14: 164.6484 2( 2) S-x(3)-I-F-G-[IL]-P-P-L-I-L-V-L-L-P-V-[AT]-S-S-[DE]-C-[DH]-I-[EK]-[DG]-K-[DE]-G-K-[AQ]-Y-E-S-V-L-M-[IV]-S-I-D-[EQ]-L-x-[DK] O 15: 164.4406 2( 2) H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N-C-T P 16: 163.6055 2( 2) M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F Q 17: 163.2092 3( 2) I-x(0,2)-D-[EQ]-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K R 18: 160.2262 2( 2) C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N-C-T-[GS] S 19: 157.2290 2( 2) L-D-x(0,2)-K-x(2)-G-x(0,2)-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N T 20: 156.2344 2( 2) D-x-M-x(1,3)-G-x(0,2)-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 171.8351 2( 2) C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S Occurences: 2(2) IL7_HUMAN : 59- 108: eigsn CLNNEfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVS egtti IL7_MOUSE : 58- 107: gtdsn CPNNEpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVS qgtqt B 2: 171.8351 2( 2) N-C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V Occurences: 2(2) IL7_HUMAN : 58- 107: keigs NCLNNEfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkV segtt IL7_MOUSE : 57- 106: tgtds NCPNNEpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtV sqgtq C 3: 171.8351 2( 2) S-N-C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L Occurences: 2(2) IL7_HUMAN : 57- 105: mkeig SNCLNNEfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLL kvseg IL7_MOUSE : 56- 104: mtgtd SNCPNNEpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLL tvsqg D 4: 171.7996 2( 2) N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T Occurences: 2(2) IL7_HUMAN : 62- 111: sncln NEfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVSEGT tilln IL7_MOUSE : 61- 110: sncpn NEpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVSQGT qtlvn E 5: 171.7996 2( 2) N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G Occurences: 2(2) IL7_HUMAN : 61- 110: gsncl NNEfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVSEG ttill IL7_MOUSE : 60- 109: dsncp NNEpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVSQG tqtlv F 6: 170.8315 2( 2) N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L Occurences: 2(2) IL7_HUMAN : 65- 114: lnnef NFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVSEGTTiL lnctg IL7_MOUSE : 64- 113: pnnep NFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVSQGTQtL vncts G 7: 169.8452 2( 2) F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N Occurences: 2(2) IL7_HUMAN : 67- 116: nefnf FkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVSEGTTiLLN ctgqv IL7_MOUSE : 66- 115: nepnf F-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVSQGTQtLVN ctske H 8: 168.3792 2( 2) I-D-[EQ]-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M Occurences: 2(2) IL7_HUMAN : 45- 94: vlmvs IDQLlDsMkEiGSNCLNNEfNFFKRHICDANKEGmFLfRAARKLRQFLKM nstgd IL7_MOUSE : 45- 93: vlmis IDEL-DkMtGtDSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLKM nisee I 9: 168.3792 2( 2) S-I-D-[EQ]-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K Occurences: 2(2) IL7_HUMAN : 44- 93: svlmv SIDQLlDsMkEiGSNCLNNEfNFFKRHICDANKEGmFLfRAARKLRQFLK mnstg IL7_MOUSE : 44- 92: svlmi SIDEL-DkMtGtDSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLK mnise J 10: 167.6295 2( 2) E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T Occurences: 2(2) IL7_HUMAN : 63- 111: nclnn EfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVSEGT tilln IL7_MOUSE : 62- 110: ncpnn EpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVSQGT qtlvn K 11: 166.7669 2( 2) F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N Occurences: 2(2) IL7_HUMAN : 67- 116: nefnf FKRHICDANKEGmFLfRAARKLRQFLKMN-StgdFDLHLLkVSEGTTiLLN ctgqv IL7_MOUSE : 66- 115: nepnf FRKHVCDDTKEAaFLnRAARKLKQFLKMNiSee-FNVHLLtVSQGTQtLVN ctske L 12: 166.6614 2( 2) F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L Occurences: 2(2) IL7_HUMAN : 66- 114: nnefn FFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDFDLHLLkVSEGTTiL lnctg IL7_MOUSE : 65- 113: nnepn FF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEFNVHLLtVSQGTQtL vncts M 13: 164.6973 2( 2) D-x(0,1)-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N Occurences: 2(2) IL7_HUMAN : 46- 95: lmvsi DqLlDsMkEiGSNCLNNEfNFFKRHICDANKEGmFLfRAARKLRQFLKMN stgdf IL7_MOUSE : 46- 94: lmisi DeL-DkMtGtDSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLKMN iseef N 14: 164.6484 2( 2) S-x(3)-I-F-G-[IL]-P-P-L-I-L-V-L-L-P-V-[AT]-S-S-[DE]-C-[DH]-I-[EK]-[DG]-K-[DE]-G-K-[AQ]-Y-E-S-V-L-M-[IV]-S-I-D-[EQ]-L-x-[DK] Occurences: 2(2) IL7_HUMAN : 5- 50: mfhv SfryIFGLPPLILVLLPVASSDCDIEGKDGKQYESVLMVSIDQLlD smkei IL7_MOUSE : 5- 50: mfhv SfryIFGIPPLILVLLPVTSSECHIKDKEGKAYESVLMISIDELdK mtgtd O 15: 164.4406 2( 2) H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N-C-T Occurences: 2(2) IL7_HUMAN : 70- 118: nffkr HICDANKEGmFLfRAARKLRQFLKMN-StgdFDLHLLkVSEGTTiLLNCT gqvkg IL7_MOUSE : 69- 117: nffrk HVCDDTKEAaFLnRAARKLKQFLKMNiSee-FNVHLLtVSQGTQtLVNCT skeek P 16: 163.6055 2( 2) M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-x(0,1)-R-x(0,1)-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST]-[EG]-[DE]-F Occurences: 2(2) IL7_HUMAN : 52- 100: qllds MkEiGSNCLNNEfNFFkR-HICDANKEGmFLfRAARKLRQFLKMNsTGDF dlhll IL7_MOUSE : 51- 99: deldk MtGtDSNCPNNEpNFF-RkHVCDDTKEAaFLnRAARKLKQFLKMNiSEEF nvhll Q 17: 163.2092 3( 2) I-x(0,2)-D-[EQ]-L-x(0,1)-D-x-M-x-[EG]-x-[DG]-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K Occurences: 3(2) IL7_HUMAN : 45- 93: vlmvs I--DQLlDsMkEiGSNCLNNEfNFFKRHICDANKEGmFLfRAARKLRQFLK mnstg IL7_MOUSE : 43- 92: esvlm IsiDEL-DkMtGtDSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLK mnise IL7_MOUSE : 45- 92: vlmis I--DEL-DkMtGtDSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLK mnise R 18: 160.2262 2( 2) C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x(0,1)-S-x(2,3)-F-[DN]-[LV]-H-L-L-x-V-S-[EQ]-G-T-[QT]-x-L-[LV]-N-C-T-[GS] Occurences: 2(2) IL7_HUMAN : 72- 119: fkrhi CDANKEGmFLfRAARKLRQFLKMN-StgdFDLHLLkVSEGTTiLLNCTG qvkgr IL7_MOUSE : 71- 118: frkhv CDDTKEAaFLnRAARKLKQFLKMNiSee-FNVHLLtVSQGTQtLVNCTS keekn S 19: 157.2290 2( 2) L-D-x(0,2)-K-x(2)-G-x(0,2)-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N Occurences: 2(2) IL7_HUMAN : 49- 95: sidql LDsmKeiG--SNCLNNEfNFFKRHICDANKEGmFLfRAARKLRQFLKMN stgdf IL7_MOUSE : 48- 94: iside LD--KmtGtdSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLKMN iseef T 20: 156.2344 2( 2) D-x-M-x(1,3)-G-x(0,2)-S-N-C-[LP]-N-N-E-x-N-F-F-[KR]-[KR]-H-[IV]-C-D-[AD]-[NT]-K-E-[AG]-x-F-L-x-R-A-A-R-K-L-[KR]-Q-F-L-K-M-N-x-[ST] Occurences: 2(2) IL7_HUMAN : 50- 97: idqll DsMkeiG--SNCLNNEfNFFKRHICDANKEGmFLfRAARKLRQFLKMNsT gdfdl IL7_MOUSE : 49- 96: sidel DkMt--GtdSNCPNNEpNFFRKHVCDDTKEAaFLnRAARKLKQFLKMNiS eefnv Number of patterns evaluated by Pratt:20495 Total running time: 1 seconds