------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 10 sequences from file INTERLEUKIN_4_13 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 10 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename INTERLEUKIN_4_13.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: IL13_HUMAN 132 IL13_MOUSE 131 IL13_RAT 131 IL4_BOVIN 135 IL4_HORSE 132 IL4_HUMAN 153 IL4_MOUSE 140 IL4_PIG 133 IL4_RAT 147 IL4_SHEEP 135 Pratt run started at Thu Feb 6 20:07:15 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 19.8503 10( 10) L-x-E-x-I-x(3,4)-N-x(1,2)-T 2: 16.1802 13( 10) L-x(0,1)-E-x-L-x(2)-I 3: 15.6802 12( 10) G-x(4,5)-L-x(2,3)-L-x(5)-C 4: 15.6802 11( 10) E-x-I-x(3,4)-N-x(1,2)-T 5: 15.1802 10( 10) L-x-E-x(3,5)-N-x(1,2)-T 6: 12.5102 11( 10) E-x-L-x(2)-I 7: 12.0102 16( 10) E-x(0,1)-L-x(2)-I 8: 12.0102 10( 10) I-x(4)-N-x(1,2)-T 9: 12.0102 20( 10) L-x(2)-L-x(2,3)-L 10: 12.0102 28( 10) L-x(2,3)-L-x(2)-L 11: 12.0102 25( 10) L-x(3,4)-L-x(2)-L 12: 11.5102 22( 10) T-x(3,5)-L-x(2)-L 13: 11.5102 13( 10) A-x(3)-T-x(3,5)-L 14: 11.5102 10( 10) L-x(2)-I-x(2,4)-N 15: 11.5102 15( 10) A-x(4,5)-T-x(4,5)-C 16: 11.5102 20( 10) S-x(4,5)-L-x(2,3)-L 17: 11.5102 24( 10) L-x(1,2)-L-x(2,3)-L 18: 11.5102 32( 10) L-x(1,3)-L-x(2)-L 19: 11.5102 14( 10) A-x(3)-T-x(2,4)-L 20: 11.0102 16( 10) L-x(1,2)-S-x(0,2)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 24.5611 10( 10) L-x-E-[IL]-I-x(3,4)-N-x(1,2)-T-[ADEGQST] B 2: 21.4203 13( 10) L-x(0,1)-E-[ERS]-L-x-[NST]-I C 3: 20.3911 10( 10) E-[IL]-I-x(3,4)-N-x(1,2)-T-[ADEGQST] D 4: 20.1588 12( 10) G-x(4,5)-L-x(2,3)-L-x(2)-[FILV]-x(2)-C-[ANST] E 5: 17.7502 11( 10) E-[ERS]-L-x-[NST]-I F 6: 17.5731 10( 10) L-x(1,2)-L-x(2,3)-L-x(4)-[NQRS]-x(3)-[AGPST]-x(3)-[ACDGN] G 7: 16.6044 10( 10) L-x-E-x(3,5)-N-x(1,2)-T-[ADEGQST] H 8: 16.4136 12( 10) T-x(3,5)-L-x(2)-L-x-[EGST]-[FIL] I 9: 14.6876 10( 10) L-x-[EN]-I-x(2,4)-N J 10: 14.6293 14( 10) E-x(0,1)-L-x-[NST]-I K 11: 14.1314 12( 10) L-x-S-x(0,2)-L-x-[NPS] L 12: 13.7033 15( 10) A-x(4,5)-T-x(4,5)-C-x-[AGTV] M 13: 13.6400 14( 10) L-x-[ADEGST]-L-x(2,3)-L N 14: 13.4344 10( 10) I-x(4)-N-x(1,2)-T-[ADEGQST] O 15: 13.4109 12( 10) A-x(3)-T-x(2,4)-L-x(4)-[EGNST] P 16: 12.0102 28( 10) L-x(2,3)-L-x(2)-L Q 17: 12.0102 25( 10) L-x(3,4)-L-x(2)-L R 18: 11.5102 12( 10) G-x(4,5)-L-x(2,3)-L S 19: 11.5102 13( 10) A-x(3)-T-x(3,5)-L T 20: 11.5102 20( 10) S-x(4,5)-L-x(2,3)-L Best patterns with alignements: fitness hits(seqs) Pattern A 1: 24.5611 10( 10) L-x-E-[IL]-I-x(3,4)-N-x(1,2)-T-[ADEGQST] Occurences: 10(10) IL13_HUMAN : 29- 41: ppsta LrELIeelvNi-TQ nqkap IL13_MOUSE : 33- 45: slplt LkELIeelsNi-TQ dqtpl IL13_RAT : 33- 45: sppva LrELIeelsNi-TQ dqkts IL4_BOVIN : 31- 43: kcdit LaEIIktl-NilTT rknsc IL4_HORSE : 30- 41: kydit LqEIIktl-Nl-TD gkgkn IL4_HUMAN : 31- 43: kcdit LqEIIktl-NslTE qktlc IL4_MOUSE : 30- 42: cdknh LrEIIgil-NevTG egtpc IL4_PIG : 31- 43: kcdit LqEIIktl-NilTA rknsc IL4_RAT : 30- 42: cndsp LrEIIntl-NqvTE kgtpc IL4_SHEEP : 31- 43: kcdit LeEIIktp-NilTS qknsc B 2: 21.4203 13( 10) L-x(0,1)-E-[ERS]-L-x-[NST]-I Occurences: 13(10) IL13_HUMAN : 32- 39: talre LiEELvNI tqnqk IL13_MOUSE : 36- 43: ltlke LiEELsNI tqdqt IL13_RAT : 36- 43: valre LiEELsNI tqdqk IL13_RAT : 71- 77: gfcaa L-ESLtNI sscna IL4_BOVIN : 120- 127: stlkd LlERLkTI mkeky IL4_BOVIN : 121- 127: tlkdl L-ERLkTI mkeky IL4_HORSE : 117- 123: stldf L-ERLkTI mreky IL4_HUMAN : 137- 143: tlenf L-ERLkTI mreky IL4_MOUSE : 128- 134: slkdf L-ESLkSI mqmdy IL4_PIG : 119- 125: tlkdf L-ERLkTI mkeky IL4_RAT : 128- 134: tlkdf L-ESLkSI lrgky IL4_SHEEP : 120- 127: stlrd LlERLkTI mreky IL4_SHEEP : 121- 127: tlrdl L-ERLkTI mreky C 3: 20.3911 10( 10) E-[IL]-I-x(3,4)-N-x(1,2)-T-[ADEGQST] Occurences: 10(10) IL13_HUMAN : 31- 41: stalr ELIeelvNi-TQ nqkap IL13_MOUSE : 35- 45: pltlk ELIeelsNi-TQ dqtpl IL13_RAT : 35- 45: pvalr ELIeelsNi-TQ dqkts IL4_BOVIN : 33- 43: ditla EIIktl-NilTT rknsc IL4_HORSE : 32- 41: ditlq EIIktl-Nl-TD gkgkn IL4_HUMAN : 33- 43: ditlq EIIktl-NslTE qktlc IL4_MOUSE : 32- 42: knhlr EIIgil-NevTG egtpc IL4_PIG : 33- 43: ditlq EIIktl-NilTA rknsc IL4_RAT : 32- 42: dsplr EIIntl-NqvTE kgtpc IL4_SHEEP : 33- 43: ditle EIIktp-NilTS qknsc D 4: 20.1588 12( 10) G-x(4,5)-L-x(2,3)-L-x(2)-[FILV]-x(2)-C-[ANST] Occurences: 12(10) IL13_HUMAN : 61- 77: inlta GmycaaLes-LinVsgCS aiekt IL13_MOUSE : 64- 80: vdlaa GgfcvaLds-LtnIsnCN aiyrt IL13_MOUSE : 65- 80: dlaag Gfcva-Lds-LtnIsnCN aiyrt IL13_RAT : 65- 81: vdlta GgfcaaLes-LtnIssCN aihrt IL13_RAT : 66- 81: dltag Gfcaa-Les-LtnIssCN aihrt IL4_BOVIN : 2- 18: m Gltyq-LipvLvcLlvCT shfvh IL4_HORSE : 2- 18: m GltsqlLpa-LvcLlaCT sfiqg IL4_HORSE : 2- 18: m Gltsq-LlpaLvcLlaCT sfiqg IL4_HUMAN : 2- 18: m GltsqlLpp-LffLlaCA gnfvh IL4_HUMAN : 2- 18: m Gltsq-LlppLffLlaCA gnfvh IL4_MOUSE : 2- 18: m Glnpq-LvviLlfFleCT rshih IL4_PIG : 2- 18: m Gltsq-LiptLvcLlaCT snfvh IL4_RAT : 2- 18: m Glsph-LavtLfcFliCT gngih IL4_SHEEP : 2- 18: m Gltsq-LipaLvcLlvCT shfvh E 5: 17.7502 11( 10) E-[ERS]-L-x-[NST]-I Occurences: 11(10) IL13_HUMAN : 34- 39: lreli EELvNI tqnqk IL13_MOUSE : 38- 43: lkeli EELsNI tqdqt IL13_RAT : 38- 43: lreli EELsNI tqdqk IL13_RAT : 72- 77: fcaal ESLtNI sscna IL4_BOVIN : 122- 127: lkdll ERLkTI mkeky IL4_HORSE : 118- 123: tldfl ERLkTI mreky IL4_HUMAN : 138- 143: lenfl ERLkTI mreky IL4_MOUSE : 129- 134: lkdfl ESLkSI mqmdy IL4_PIG : 120- 125: lkdfl ERLkTI mkeky IL4_RAT : 129- 134: lkdfl ESLkSI lrgky IL4_SHEEP : 122- 127: lrdll ERLkTI mreky F 6: 17.5731 10( 10) L-x(1,2)-L-x(2,3)-L-x(4)-[NQRS]-x(3)-[AGPST]-x(3)-[ACDGN] Occurences: 10(10) IL13_HUMAN : 29- 49: ppsta LreLieeLvnitQnqkAplcN gsmvw IL13_MOUSE : 33- 53: slplt LkeLieeLsnitQdqtPlcnG smvws IL13_RAT : 33- 53: sppva LreLieeLsnitQdqkTslcN ssmvw IL4_BOVIN : 90- 110: clnkf LggLdrnLnslaSktcSvneA ktsts IL4_HORSE : 8- 27: ltsql LpaLvc-LlactSfiqGckyD itlqe IL4_HUMAN : 8- 28: ltsql LppLfflLacagNfvhGhkcD itlqe IL4_MOUSE : 95- 114: knssv LmeLqr-LfrafRcldSsisC tmnes IL4_PIG : 90- 110: cmksl LsgLdrnLssmaNmtcSvheA kkstl IL4_RAT : 95- 114: nksgv LgeLrk-LcrgvSglnSlrsC tvnes IL4_SHEEP : 90- 110: clnkf LggLdrnLsslaSktcSvneA ktsts G 7: 16.6044 10( 10) L-x-E-x(3,5)-N-x(1,2)-T-[ADEGQST] Occurences: 10(10) IL13_HUMAN : 32- 41: talre LiEelv--Ni-TQ nqkap IL13_MOUSE : 36- 45: ltlke LiEels--Ni-TQ dqtpl IL13_RAT : 36- 45: valre LiEels--Ni-TQ dqkts IL4_BOVIN : 31- 43: kcdit LaEiiktlNilTT rknsc IL4_HORSE : 30- 41: kydit LqEiiktlNl-TD gkgkn IL4_HUMAN : 31- 43: kcdit LqEiiktlNslTE qktlc IL4_MOUSE : 30- 42: cdknh LrEiigilNevTG egtpc IL4_PIG : 31- 43: kcdit LqEiiktlNilTA rknsc IL4_RAT : 30- 42: cndsp LrEiintlNqvTE kgtpc IL4_SHEEP : 31- 43: kcdit LeEiiktpNilTS qknsc H 8: 16.4136 12( 10) T-x(3,5)-L-x(2)-L-x-[EGST]-[FIL] Occurences: 12(10) IL13_HUMAN : 6- 17: malll Ttvia-LtcLgGF aspgp IL13_HUMAN : 7- 17: alllt Tvia--LtcLgGF aspgp IL13_MOUSE : 6- 17: malwv Tavla-LacLgGL aapgp IL13_RAT : 6- 17: malwv Tavla-LacLgGL atpgp IL4_BOVIN : 116- 127: ktsts Tlkdl-LerLkTI mkeky IL4_HORSE : 113- 123: eakks Tldf--LerLkTI mreky IL4_HUMAN : 132- 143: eanqs Tlenf-LerLkTI mreky IL4_MOUSE : 122- 134: nesks TslkdfLesLkSI mqmdy IL4_PIG : 114- 125: eakks Tlkdf-LerLkTI mkeky IL4_RAT : 122- 134: nestl TtlkdfLesLkSI lrgky IL4_RAT : 123- 134: estlt Tlkdf-LesLkSI lrgky IL4_SHEEP : 116- 127: ktsts Tlrdl-LerLkTI mreky I 9: 14.6876 10( 10) L-x-[EN]-I-x(2,4)-N Occurences: 10(10) IL13_HUMAN : 36- 42: eliee LvNItq--N qkapl IL13_MOUSE : 73- 80: valds LtNIsnc-N aiyrt IL13_RAT : 74- 81: aales LtNIssc-N aihrt IL4_BOVIN : 31- 39: kcdit LaEIiktlN ilttr IL4_HORSE : 30- 38: kydit LqEIiktlN ltdgk IL4_HUMAN : 31- 39: kcdit LqEIiktlN slteq IL4_MOUSE : 30- 38: cdknh LrEIigilN evtge IL4_PIG : 31- 39: kcdit LqEIiktlN iltar IL4_RAT : 30- 38: cndsp LrEIintlN qvtek IL4_SHEEP : 31- 39: kcdit LeEIiktpN iltsq J 10: 14.6293 14( 10) E-x(0,1)-L-x-[NST]-I Occurences: 14(10) IL13_HUMAN : 34- 39: lreli EeLvNI tqnqk IL13_HUMAN : 35- 39: relie E-LvNI tqnqk IL13_MOUSE : 38- 43: lkeli EeLsNI tqdqt IL13_MOUSE : 39- 43: kelie E-LsNI tqdqt IL13_RAT : 38- 43: lreli EeLsNI tqdqk IL13_RAT : 39- 43: relie E-LsNI tqdqk IL13_RAT : 72- 77: fcaal EsLtNI sscna IL4_BOVIN : 122- 127: lkdll ErLkTI mkeky IL4_HORSE : 118- 123: tldfl ErLkTI mreky IL4_HUMAN : 138- 143: lenfl ErLkTI mreky IL4_MOUSE : 129- 134: lkdfl EsLkSI mqmdy IL4_PIG : 120- 125: lkdfl ErLkTI mkeky IL4_RAT : 129- 134: lkdfl EsLkSI lrgky IL4_SHEEP : 122- 127: lrdll ErLkTI mreky K 11: 14.1314 12( 10) L-x-S-x(0,2)-L-x-[NPS] Occurences: 12(10) IL13_HUMAN : 67- 72: mycaa LeS--LiN vsgcs IL13_MOUSE : 70- 75: gfcva LdS--LtN isncn IL13_RAT : 71- 76: gfcaa LeS--LtN isscn IL4_BOVIN : 97- 102: gldrn LnS--LaS ktcsv IL4_HORSE : 3- 9: mg LtSq-LlP alvcl IL4_HUMAN : 3- 9: mg LtSq-LlP plffl IL4_HUMAN : 3- 10: mg LtSqlLpP lffll IL4_MOUSE : 128- 133: slkdf LeS--LkS imqmd IL4_PIG : 3- 9: mg LtSq-LiP tlvcl IL4_RAT : 108- 113: rgvsg LnS--LrS ctvne IL4_RAT : 128- 133: tlkdf LeS--LkS ilrgk IL4_SHEEP : 3- 9: mg LtSq-LiP alvcl IL4_SHEEP : 97- 102: gldrn LsS--LaS ktcsv L 12: 13.7033 15( 10) A-x(4,5)-T-x(4,5)-C-x-[AGTV] Occurences: 15(10) IL13_HUMAN : 2- 15: m Alllt-TvialtClG gfasp IL13_MOUSE : 69- 81: ggfcv Aldsl-Tnisn-CnA iyrtq IL13_RAT : 69- 82: aggfc AaleslTniss-CnA ihrtq IL13_RAT : 70- 82: ggfca Alesl-Tniss-CnA ihrtq IL4_BOVIN : 58- 72: vadvf AapkntTeketfCrV gielr IL4_BOVIN : 59- 72: advfa Apknt-TeketfCrV gielr IL4_HORSE : 56- 70: ltvad AfgpknTdgkeiCrA akvlq IL4_HUMAN : 58- 72: vtdif AaskntTeketfCrA atvlr IL4_HUMAN : 59- 72: tdifa Asknt-TeketfCrA atvlr IL4_MOUSE : 58- 71: pnvlt Atknt-TeselvCrA skvlr IL4_PIG : 58- 72: vtdvf AapentTeketfCrA stvlr IL4_PIG : 59- 72: tdvfa Apent-TeketfCrA stvlr IL4_RAT : 58- 71: pdvlt Atrnt-TeneliCrA srvlr IL4_SHEEP : 58- 72: aadvf AapknaTeketfCrT gielr IL4_SHEEP : 59- 72: advfa Apkna-TeketfCrT gielr M 13: 13.6400 14( 10) L-x-[ADEGST]-L-x(2,3)-L Occurences: 14(10) IL13_HUMAN : 29- 36: ppsta LrELieeL vnitq IL13_MOUSE : 33- 40: slplt LkELieeL snitq IL13_RAT : 33- 40: sppva LrELieeL snitq IL4_BOVIN : 90- 97: clnkf LgGLdrnL nslas IL4_BOVIN : 117- 124: tstst LkDLlerL ktimk IL4_HORSE : 8- 14: ltsql LpALvc-L lacts IL4_HORSE : 8- 15: ltsql LpALvclL actsf IL4_HUMAN : 114- 120: rldrn LwGLag-L nscpv IL4_MOUSE : 95- 101: knssv LmELqr-L frafr IL4_PIG : 90- 97: cmksl LsGLdrnL ssman IL4_RAT : 95- 101: nksgv LgELrk-L crgvs IL4_RAT : 121- 128: vnest LtTLkdfL eslks IL4_RAT : 128- 135: tlkdf LeSLksiL rgkyl IL4_SHEEP : 90- 97: clnkf LgGLdrnL sslas IL4_SHEEP : 117- 124: tstst LrDLlerL ktimr N 14: 13.4344 10( 10) I-x(4)-N-x(1,2)-T-[ADEGQST] Occurences: 10(10) IL13_HUMAN : 33- 41: alrel IeelvNi-TQ nqkap IL13_MOUSE : 37- 45: tlkel IeelsNi-TQ dqtpl IL13_RAT : 37- 45: alrel IeelsNi-TQ dqkts IL4_BOVIN : 34- 43: itlae IiktlNilTT rknsc IL4_HORSE : 33- 41: itlqe IiktlNl-TD gkgkn IL4_HUMAN : 34- 43: itlqe IiktlNslTE qktlc IL4_MOUSE : 33- 42: nhlre IigilNevTG egtpc IL4_PIG : 34- 43: itlqe IiktlNilTA rknsc IL4_RAT : 33- 42: splre IintlNqvTE kgtpc IL4_SHEEP : 34- 43: itlee IiktpNilTS qknsc O 15: 13.4109 12( 10) A-x(3)-T-x(2,4)-L-x(4)-[EGNST] Occurences: 12(10) IL13_HUMAN : 2- 16: m AlllTtviaLtclgG faspg IL13_MOUSE : 2- 16: m AlwvTavlaLaclgG laapg IL13_MOUSE : 81- 94: isncn AiyrTqri-LhglcN rkapt IL13_RAT : 2- 16: m AlwvTavlaLaclgG latpg IL13_RAT : 82- 95: isscn AihrTqri-LnglcN qkasd IL4_BOVIN : 110- 122: csvne AktsTst--LkdllE rlkti IL4_HORSE : 109- 122: ctvne AkksTldf-LerlkT imrek IL4_HUMAN : 128- 142: cpvke AnqsTlenfLerlkT imrek IL4_MOUSE : 58- 72: pnvlt AtknTteseLvcraS kvlri IL4_PIG : 110- 124: csvhe AkksTlkdfLerlkT imkek IL4_RAT : 58- 72: pdvlt AtrnTteneLicraS rvlrk IL4_SHEEP : 110- 122: csvne AktsTst--LrdllE rlkti P 16: 12.0102 28( 10) L-x(2,3)-L-x(2)-L Occurences: 28(10) IL13_HUMAN : 118- 125: qfvkd LllhLkkL fregr IL13_HUMAN : 119- 125: fvkdl Llh-LkkL fregr IL13_MOUSE : 11- 17: tavla Lac-LggL aapgp IL13_MOUSE : 29- 36: prsvs LpltLkeL ieels IL13_RAT : 11- 17: tavla Lac-LggL atpgp IL4_BOVIN : 7- 14: gltyq LipvLvcL lvcts IL4_BOVIN : 86- 93: rshtc LnkfLggL drnln IL4_BOVIN : 93- 100: kflgg LdrnLnsL asktc IL4_BOVIN : 117- 124: tstst LkdlLerL ktimk IL4_HORSE : 7- 14: gltsq LlpaLvcL lacts IL4_HORSE : 8- 14: ltsql Lpa-LvcL lacts IL4_HORSE : 114- 120: akkst Ldf-LerL ktimr IL4_HUMAN : 7- 14: gltsq LlppLffL lacag IL4_HUMAN : 8- 14: ltsql Lpp-LffL lacag IL4_HUMAN : 103- 110: hrhkq LirfLkrL drnlw IL4_HUMAN : 110- 117: rflkr LdrnLwgL aglns IL4_HUMAN : 114- 120: rldrn Lwg-LagL nscpv IL4_HUMAN : 133- 140: anqst LenfLerL ktimr IL4_MOUSE : 95- 101: knssv Lme-LqrL frafr IL4_MOUSE : 124- 131: sksts LkdfLesL ksimq IL4_PIG : 7- 14: gltsq LiptLvcL lacts IL4_PIG : 115- 122: akkst LkdfLerL ktimk IL4_RAT : 95- 101: nksgv Lge-LrkL crgvs IL4_RAT : 124- 131: stltt LkdfLesL ksilr IL4_SHEEP : 7- 14: gltsq LipaLvcL lvcts IL4_SHEEP : 86- 93: rshmc LnkfLggL drnls IL4_SHEEP : 93- 100: kflgg LdrnLssL asktc IL4_SHEEP : 117- 124: tstst LrdlLerL ktimr Q 17: 12.0102 25( 10) L-x(3,4)-L-x(2)-L Occurences: 25(10) IL13_HUMAN : 118- 125: qfvkd Lllh-LkkL fregr IL13_MOUSE : 9- 17: wvtav LalacLggL aapgp IL13_MOUSE : 29- 36: prsvs Lplt-LkeL ieels IL13_RAT : 9- 17: wvtav LalacLggL atpgp IL4_BOVIN : 7- 14: gltyq Lipv-LvcL lvcts IL4_BOVIN : 86- 93: rshtc Lnkf-LggL drnln IL4_BOVIN : 93- 100: kflgg Ldrn-LnsL asktc IL4_BOVIN : 117- 124: tstst Lkdl-LerL ktimk IL4_HORSE : 3- 11: mg LtsqlLpaL vclla IL4_HORSE : 7- 14: gltsq Llpa-LvcL lacts IL4_HORSE : 84- 92: rhdrs LikecLsgL drnkg IL4_HUMAN : 3- 11: mg LtsqlLppL fflla IL4_HUMAN : 7- 14: gltsq Llpp-LffL lacag IL4_HUMAN : 103- 110: hrhkq Lirf-LkrL drnlw IL4_HUMAN : 110- 117: rflkr Ldrn-LwgL aglns IL4_HUMAN : 133- 140: anqst Lenf-LerL ktimr IL4_MOUSE : 7- 15: glnpq LvvilLffL ectrs IL4_MOUSE : 124- 131: sksts Lkdf-LesL ksimq IL4_PIG : 7- 14: gltsq Lipt-LvcL lacts IL4_PIG : 115- 122: akkst Lkdf-LerL ktimk IL4_RAT : 124- 131: stltt Lkdf-LesL ksilr IL4_SHEEP : 7- 14: gltsq Lipa-LvcL lvcts IL4_SHEEP : 86- 93: rshmc Lnkf-LggL drnls IL4_SHEEP : 93- 100: kflgg Ldrn-LssL asktc IL4_SHEEP : 117- 124: tstst Lrdl-LerL ktimr R 18: 11.5102 12( 10) G-x(4,5)-L-x(2,3)-L Occurences: 12(10) IL13_HUMAN : 61- 70: inlta GmycaaLes-L invsg IL13_MOUSE : 64- 73: vdlaa GgfcvaLds-L tnisn IL13_MOUSE : 65- 73: dlaag Gfcva-Lds-L tnisn IL13_RAT : 65- 74: vdlta GgfcaaLes-L tniss IL13_RAT : 66- 74: dltag Gfcaa-Les-L tniss IL4_BOVIN : 2- 11: m Gltyq-LipvL vcllv IL4_HORSE : 2- 11: m GltsqlLpa-L vclla IL4_HORSE : 2- 11: m Gltsq-LlpaL vclla IL4_HUMAN : 2- 11: m GltsqlLpp-L fflla IL4_HUMAN : 2- 11: m Gltsq-LlppL fflla IL4_MOUSE : 2- 11: m Glnpq-LvviL lffle IL4_PIG : 2- 11: m Gltsq-LiptL vclla IL4_RAT : 2- 11: m Glsph-LavtL fcfli IL4_SHEEP : 2- 11: m Gltsq-LipaL vcllv S 19: 11.5102 13( 10) A-x(3)-T-x(3,5)-L Occurences: 13(10) IL13_HUMAN : 2- 11: m AlllTtvia-L tclgg IL13_HUMAN : 78- 86: vsgcs AiekTqrm--L sgfcp IL13_MOUSE : 2- 11: m AlwvTavla-L aclgg IL13_MOUSE : 81- 89: isncn AiyrTqri--L hglcn IL13_RAT : 2- 11: m AlwvTavla-L aclgg IL13_RAT : 82- 90: isscn AihrTqri--L nglcn IL4_BOVIN : 110- 120: csvne AktsTstlkdL lerlk IL4_HORSE : 109- 117: ctvne AkksTldf--L erlkt IL4_HUMAN : 128- 137: cpvke AnqsTlenf-L erlkt IL4_MOUSE : 58- 67: pnvlt AtknTtese-L vcras IL4_PIG : 110- 119: csvhe AkksTlkdf-L erlkt IL4_RAT : 58- 67: pdvlt AtrnTtene-L icras IL4_SHEEP : 110- 120: csvne AktsTstlrdL lerlk T 20: 11.5102 20( 10) S-x(4,5)-L-x(2,3)-L Occurences: 20(10) IL13_HUMAN : 26- 36: gpvpp StalreLieeL vnitq IL13_MOUSE : 28- 36: vprsv Slplt-Lke-L ieels IL13_RAT : 28- 36: vrrst Sppva-Lre-L ieels IL4_BOVIN : 115- 124: aktst StlkdlLer-L ktimk IL4_BOVIN : 115- 124: aktst Stlkd-LlerL ktimk IL4_HORSE : 5- 14: mglt SqllpaLvc-L lacts IL4_HORSE : 5- 15: mglt SqllpaLvclL actsf IL4_HORSE : 83- 92: krhdr SlikecLsg-L drnkg IL4_HORSE : 112- 120: neakk Stldf-Ler-L ktimr IL4_HUMAN : 5- 14: mglt SqllppLff-L lacag IL4_HUMAN : 5- 15: mglt SqllppLfflL acagn IL4_HUMAN : 131- 140: keanq StlenfLer-L ktimr IL4_MOUSE : 92- 101: clkkn SsvlmeLqr-L frafr IL4_MOUSE : 93- 101: lkkns Svlme-Lqr-L frafr IL4_MOUSE : 119- 128: ctmne Sksts-LkdfL eslks IL4_MOUSE : 123- 131: eskst Slkdf-Les-L ksimq IL4_PIG : 5- 14: mglt SqliptLvc-L lacts IL4_PIG : 5- 15: mglt SqliptLvclL actsn IL4_PIG : 88- 97: htcmk Sllsg-LdrnL ssman IL4_PIG : 113- 122: heakk StlkdfLer-L ktimk IL4_RAT : 92- 101: clknk SgvlgeLrk-L crgvs IL4_RAT : 119- 128: ctvne Stltt-LkdfL eslks IL4_SHEEP : 5- 14: mglt SqlipaLvc-L lvcts IL4_SHEEP : 5- 15: mglt SqlipaLvclL vctsh IL4_SHEEP : 115- 124: aktst StlrdlLer-L ktimr IL4_SHEEP : 115- 124: aktst Stlrd-LlerL ktimr Number of patterns evaluated by Pratt:581 Total running time: 0 seconds