------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 24 sequences from file HTH_GNTR_FAMILY PATTERN CONSERVATION: CM: min Nr of Seqs to Match 24 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename HTH_GNTR_FAMILY.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: EXUR_ECOLI 263 FADR_ECOLI 238 FADR_HAEIN 241 FARR_ECOLI 240 GNTR_BACLI 243 GNTR_BACSU 243 HUTC_KLEAE 241 HUTC_PSEPU 248 KORA_STRLI 241 LLDR_ECOLI 258 PDHR_ECOLI 254 PHNF_ECOLI 241 PTSJ_SALTY 430 UXUR_ECOLI 257 UXUR_HAEIN 266 YCBG_BACSU 233 YFXA_BACSU 109 YHCK_ECOLI 263 YHFR_ECOLI 265 YIDP_ECOLI 238 YIDW_ECOLI 177 YIHL_ECOLI 236 YIN1_STRAM 236 YRDX_RHOSH 456 Pratt run started at Thu Feb 6 19:56:37 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.0102 49( 24) R-x(0,2)-A-x(3,4)-L 2: 10.5102 30( 24) L-x(0,2)-P-x(1,3)-E 3: 10.5102 43( 24) A-x(2,4)-L-x(1,3)-E 4: 8.3401 64( 24) L-x(3)-R 5: 8.3401 54( 24) R-x-A 6: 8.3401 65( 24) A-x(3)-L 7: 8.3401 46( 24) R-x(3)-R 8: 7.8401 118( 24) E-x(0,1)-L 9: 7.8401 52( 24) S-x(0,1)-E 10: 7.8401 55( 24) P-x(1,2)-E 11: 7.8401 71( 24) S-x(0,1)-A 12: 7.8401 87( 24) L-x(3,4)-S 13: 7.8401 84( 24) L-x(2,3)-S 14: 7.8401 113( 24) L-x(4,5)-A 15: 7.8401 108( 24) L-x(3,4)-A 16: 7.8401 116( 24) R-x(1,2)-L 17: 7.8401 82( 24) A-x(2,3)-R 18: 7.8401 142( 24) L-x(0,1)-A 19: 7.8401 109( 24) R-x(0,1)-L 20: 7.8401 67( 24) L-x(4,5)-D Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 11.0102 49( 24) R-x(0,2)-A-x(3,4)-L B 2: 10.5102 30( 24) L-x(0,2)-P-x(1,3)-E C 3: 10.5102 43( 24) A-x(2,4)-L-x(1,3)-E D 4: 9.9789 38( 24) A-x(3)-L-x-[ADEQST] E 5: 9.7227 68( 24) L-x(0,1)-A-[DEQRS] F 6: 8.3401 64( 24) L-x(3)-R G 7: 8.3401 54( 24) R-x-A H 8: 8.3401 46( 24) R-x(3)-R I 9: 7.8401 118( 24) E-x(0,1)-L J 10: 7.8401 52( 24) S-x(0,1)-E K 11: 7.8401 55( 24) P-x(1,2)-E L 12: 7.8401 71( 24) S-x(0,1)-A M 13: 7.8401 87( 24) L-x(3,4)-S N 14: 7.8401 84( 24) L-x(2,3)-S O 15: 7.8401 113( 24) L-x(4,5)-A P 16: 7.8401 108( 24) L-x(3,4)-A Q 17: 7.8401 116( 24) R-x(1,2)-L R 18: 7.8401 82( 24) A-x(2,3)-R S 19: 7.8401 109( 24) R-x(0,1)-L T 20: 7.8401 67( 24) L-x(4,5)-D Best patterns with alignements: fitness hits(seqs) Pattern A 1: 11.0102 49( 24) R-x(0,2)-A-x(3,4)-L Occurences: 49(24) EXUR_ECOLI : 55- 61: srtvv Re-Aiim-L evegy FADR_ECOLI : 53- 60: revlq Rl-ArdgwL tiqhg FADR_HAEIN : 59- 66: revlq Rl-ArdgwL tiqhg FARR_ECOLI : 47- 53: srvtv Rq-Alrq-L veqqi GNTR_BACLI : 59- 65: srspi Re-Alki-L aseki GNTR_BACLI : 75- 83: iirle RmgAvvigL tekei GNTR_BACLI : 108- 114: ferlg R--AnvdeL vtdls GNTR_BACSU : 59- 65: srspv Re-Alki-L aseki GNTR_BACSU : 75- 83: iirle RmgAvvigL tekki HUTC_KLEAE : 55- 60: rmtin R--Alre-L tdegl HUTC_PSEPU : 62- 67: rmtin R--Alre-L tadgl KORA_STRLI : 79- 85: rrtlh Rt-Aadr-L esals LLDR_ECOLI : 49- 55: srnsl Re-Alak-L vsegv LLDR_ECOLI : 215- 222: dadga Rk-AmmahL sfvht LLDR_ECOLI : 238- 245: dedqa Rh-AritrL pgehn PDHR_ECOLI : 52- 58: srpsl Re-Aiqr-L eakgl PDHR_ECOLI : 57- 64: reaiq RleAkgl-L lrrqg PDHR_ECOLI : 57- 65: reaiq RleAkgllL rrqgg PDHR_ECOLI : 218- 225: kpeea Re-AshrhL afiee PHNF_ECOLI : 53- 59: nrhtl Rr-Aidq-L vekgw PHNF_ECOLI : 54- 59: rhtlr R--Aidq-L vekgw PTSJ_SALTY : 24- 29: iagtl R--Aeds-L ppvre PTSJ_SALTY : 233- 241: slsar RaaAlqnmL arypq UXUR_ECOLI : 51- 57: trtvv Re-Alim-L eikgl UXUR_ECOLI : 66- 74: glvev RrgAgiyvL dnsgs UXUR_ECOLI : 67- 74: lvevr Rg-AgiyvL dnsgs UXUR_HAEIN : 66- 72: srtiv Re-Amvm-L evekl UXUR_HAEIN : 227- 234: nanea Rk-AmwqhL envkv YCBG_BACSU : 36- 41: ssgql R--Agdk-L pteme YCBG_BACSU : 59- 65: srpvl Re-Alss-L etlgv YCBG_BACSU : 108- 115: aiiea Rm-AlelgL vtiaa YFXA_BACSU : 21- 28: qiegg RwkAeei-L psehe YHCK_ECOLI : 25- 32: rnlrs RplArkk-L semve YHCK_ECOLI : 73- 79: grpsv Re-Alaa-L krkgl YHCK_ECOLI : 239- 245: pdead R--AlqshL nsvsa YHFR_ECOLI : 75- 81: sriti Rk-Aisd-L vadgv YHFR_ECOLI : 252- 258: selfc R--AnritL tidnk YIDP_ECOLI : 43- 49: srmti Rk-Aidl-L vawgl YIDW_ECOLI : 116- 122: vaxae R--AtssdL aqies YIHL_ECOLI : 48- 54: krmtl Rq-Alln-L eaesk YIN1_STRAM : 78- 85: rvdpa Rv-AdaqfL reave YIN1_STRAM : 159- 165: kghld R--ArrlgL henvs YIN1_STRAM : 194- 201: dvpla Rt-AmrthL ravfd YIN1_STRAM : 210- 218: fddie RirAhspeL fatda YIN1_STRAM : 212- 218: dieri R--AhspeL fatda YRDX_RHOSH : 40- 46: rlppq R--AiaeaL gvdlt YRDX_RHOSH : 138- 145: gapad RtaAasw-L agrva YRDX_RHOSH : 138- 145: gapad Rt-AaaswL agrva YRDX_RHOSH : 222- 229: feavc RerApkl-L ylips YRDX_RHOSH : 224- 229: avcre R--Apkl-L ylips YRDX_RHOSH : 275- 282: plrse RlpAlae-L apelt B 2: 10.5102 30( 24) L-x(0,2)-P-x(1,3)-E Occurences: 30(24) EXUR_ECOLI : 37- 40: lvgdk L--Pa--E rfiad FADR_ECOLI : 30- 33: ppgti L--Pa--E relse FADR_ECOLI : 30- 35: ppgti L--PaerE lseli FADR_HAEIN : 36- 39: pagsn L--Ps--E rdlad FARR_ECOLI : 29- 32: kpgda L--Pt--E salqt FARR_ECOLI : 183- 187: qeiip Lm-Pt--E emsrl FARR_ECOLI : 183- 188: qeiip Lm-Pte-E msrll GNTR_BACLI : 164- 169: miwnn Lk-Pvm-E sfill GNTR_BACSU : 164- 169: miwnn Lk-Pvm-E sfill HUTC_KLEAE : 175- 181: hdyls LiaPlt-E gehiv HUTC_PSEPU : 197- 202: vveai LaePe--E crllq KORA_STRLI : 108- 113: itsaa LaePp--E wvadl LLDR_ECOLI : 31- 34: eagmk L--Pa--E rqlam LLDR_ECOLI : 245- 248: aritr L--Pg--E hnehs PDHR_ECOLI : 28- 32: ilegt Lr-Pg--E klppe PDHR_ECOLI : 34- 37: rpgek L--Pp--E relak PDHR_ECOLI : 34- 39: rpgek Lp-Per-E lakqf PDHR_ECOLI : 34- 39: rpgek L--PperE lakqf PHNF_ECOLI : 35- 38: rcgdy L--Pa--E qqlaa PTSJ_SALTY : 29- 34: raeds Lp-Pvr-E lasel PTSJ_SALTY : 29- 34: raeds L--PpvrE lasel UXUR_ECOLI : 33- 36: npger L--Pp--E reiae UXUR_ECOLI : 33- 38: npger Lp-Per-E iaeml UXUR_ECOLI : 33- 38: npger L--PperE iaeml UXUR_HAEIN : 48- 51: sigdk L--Pt--E reise UXUR_HAEIN : 48- 53: sigdk L--PterE isekf YCBG_BACSU : 41- 44: ragdk L--Pt--E melmd YCBG_BACSU : 41- 46: ragdk L--PtemE lmdil YCBG_BACSU : 101- 106: latdn L--PaiiE armal YFXA_BACSU : 28- 31: kaeei L--Ps--E helta YFXA_BACSU : 28- 33: kaeei L--PsehE ltaqy YHCK_ECOLI : 55- 58: gegeq L--Ps--E relma YHCK_ECOLI : 55- 60: gegeq L--PserE lmaff YHFR_ECOLI : 142- 149: pfcek LniPgnsE vfhlc YIDP_ECOLI : 24- 28: ftlns Ll-Pg--E kklae YIDP_ECOLI : 25- 28: tlnsl L--Pg--E kklae YIDW_ECOLI : 28- 31: vpgsp L--Pa--E aelce YIDW_ECOLI : 28- 33: vpgsp L--PaeaE lceef YIHL_ECOLI : 30- 33: tpggk L--Ps--E relge YIHL_ECOLI : 30- 35: tpggk L--PserE lgell YIN1_STRAM : 97- 100: gslda L--Pa--E ldpav YRDX_RHOSH : 213- 218: deqgi L--PeafE avcre YRDX_RHOSH : 276- 281: lrser L--PalaE lapel C 3: 10.5102 43( 24) A-x(2,4)-L-x(1,3)-E Occurences: 43(24) EXUR_ECOLI : 19- 24: lyqql Aad--Lk--E rieqg EXUR_ECOLI : 57- 64: tvvre Aiim-Lev-E gyvev EXUR_ECOLI : 105- 110: fellq Arq--Li--E sniae EXUR_ECOLI : 242- 249: dfefn Adry-Lfa-E npvvh FADR_ECOLI : 32- 38: gtilp Aere-Ls--E ligvt FADR_HAEIN : 32- 39: qdvfp Agsn-Lps-E rdlad FARR_ECOLI : 49- 55: vtvrq Alrq-Lv--E qqile GNTR_BACLI : 61- 68: spire Alki-Las-E kiirl GNTR_BACLI : 78- 85: lermg AvvigLt--E keige GNTR_BACLI : 78- 87: lermg AvvigLtekE igeiy GNTR_BACSU : 61- 68: spvre Alki-Las-E kiirl GNTR_BACSU : 78- 85: lermg AvvigLt--E kkiae HUTC_KLEAE : 56- 63: mtinr Alre-Ltd-E gllvr HUTC_KLEAE : 119- 126: adhiq Ata--LsvpE gtrif HUTC_PSEPU : 126- 133: agser Ala--LdmrE gqrvf KORA_STRLI : 57- 62: hrtlk Aeg--La--E akqgs KORA_STRLI : 116- 122: ppewv Adl--Lgt-E sgqav LLDR_ECOLI : 27- 34: eknle Agmk-Lpa-E rqlam LLDR_ECOLI : 51- 58: nslre Alak-Lvs-E gvlls LLDR_ECOLI : 240- 248: dqarh AritrLpg-E hnehs PDHR_ECOLI : 220- 229: eeare AshrhLafiE eilld PHNF_ECOLI : 18- 24: ryqei Aak--Leq-E lrqhy PHNF_ECOLI : 55- 61: htlrr Aidq-Lv--E kgwvq PHNF_ECOLI : 118- 125: asghv Ada--LgitE genvi PTSJ_SALTY : 20- 26: rqhii Agt--Lra-E dslpp PTSJ_SALTY : 384- 392: taftl AksgwLvr-E geafg UXUR_ECOLI : 101- 106: fellq Arq--Ll--E sniae UXUR_ECOLI : 128- 133: vkmrq Alq--Le--E relas UXUR_ECOLI : 128- 135: vkmrq Alq--LeerE lassa UXUR_HAEIN : 68- 75: tivre Amvm-Lev-E klvev UXUR_HAEIN : 113- 118: fellq Arq--Ll--E ssiae YCBG_BACSU : 37- 44: sgqlr Agdk-Lpt-E melmd YFXA_BACSU : 24- 31: ggrwk Aeei-Lps-E helta YHCK_ECOLI : 28- 34: rsrpl Arkk-Ls--E mveee YHFR_ECOLI : 218- 224: atrpq Akw--Lkc-E lgepl YIDP_ECOLI : 75- 82: vlhqt AsltgLv--E vlkrq YIDW_ECOLI : 30- 36: gsplp Aeae-Lc--E efats YIDW_ECOLI : 30- 37: gsplp Aeae-Lce-E fatsr YIDW_ECOLI : 54- 59: frslm Akr--Li--E mkryr YIDW_ECOLI : 117- 126: axaer AtssdLaqiE salne YIHL_ECOLI : 50- 57: mtlrq Alln-Lea-E skifr YIN1_STRAM : 27- 34: ltlel ApgaaLs--E nelaa YIN1_STRAM : 27- 36: ltlel ApgaaLsenE laasm YIN1_STRAM : 80- 87: dparv AdaqfLr--E avelg YIN1_STRAM : 82- 87: arvad Aqf--Lr--E avelg YIN1_STRAM : 160- 167: ghldr ArrlgLh--E nvspa YIN1_STRAM : 160- 167: ghldr Arr--LglhE nvspa YRDX_RHOSH : 278- 285: serlp Alae-Lap-E ltwhi D 4: 9.9789 38( 24) A-x(3)-L-x-[ADEQST] Occurences: 38(24) EXUR_ECOLI : 242- 248: dfefn AdryLfA enpvv FADR_ECOLI : 32- 38: gtilp AereLsE ligvt FADR_ECOLI : 123- 129: qhpdk AqevLaT aneva FADR_HAEIN : 32- 38: qdvfp AgsnLpS erdla FARR_ECOLI : 49- 55: vtvrq AlrqLvE qqile FARR_ECOLI : 107- 113: fevip AddfLqQ qlqit GNTR_BACLI : 61- 67: spire AlkiLaS ekiir GNTR_BACSU : 61- 67: spvre AlkiLaS ekiir HUTC_KLEAE : 56- 62: mtinr AlreLtD egllv HUTC_PSEPU : 63- 69: mtinr AlreLtA dgllv HUTC_PSEPU : 163- 169: vnaai ApdyLkQ dftrq KORA_STRLI : 81- 87: tlhrt AadrLeS alstg LLDR_ECOLI : 27- 33: eknle AgmkLpA erqla LLDR_ECOLI : 51- 57: nslre AlakLvS egvll PDHR_ECOLI : 54- 60: pslre AiqrLeA kglll PHNF_ECOLI : 37- 43: gdylp AeqqLaA rfevn PHNF_ECOLI : 55- 61: htlrr AidqLvE kgwvq PTSJ_SALTY : 49- 55: ntvaa AykrLiT aglaq PTSJ_SALTY : 130- 136: elhaw AarwLrD atpva PTSJ_SALTY : 368- 374: gdgvn AwlpLdT hsqat UXUR_ECOLI : 101- 107: fellq ArqlLeS niaef UXUR_HAEIN : 113- 119: fellq ArqlLeS siaef YCBG_BACSU : 37- 43: sgqlr AgdkLpT emelm YCBG_BACSU : 61- 67: pvlre AlssLeT lgvit YCBG_BACSU : 97- 103: vmlal AtdnLpA iiear YFXA_BACSU : 24- 30: ggrwk AeeiLpS ehelt YHCK_ECOLI : 28- 34: rsrpl ArkkLsE mveee YHCK_ECOLI : 237- 243: hdpde AdraLqS hlnsv YHFR_ECOLI : 77- 83: itirk AisdLvA dgvli YIDP_ECOLI : 17- 23: irlns AdftLnS llpge YIDP_ECOLI : 45- 51: mtirk AidlLvA wglvv YIDW_ECOLI : 30- 36: gsplp AeaeLcE efats YIDW_ECOLI : 168- 174: qqlsi AissLqA ggf YIHL_ECOLI : 50- 56: mtlrq AllnLeA eskif YIN1_STRAM : 56- 62: slill AqegLvQ vfpki YRDX_RHOSH : 163- 169: vvtsg AqaaLfA lcall YRDX_RHOSH : 166- 172: sgaqa AlfaLcA lllgr YRDX_RHOSH : 313- 319: apnaa AavrLaT vlrss E 5: 9.7227 68( 24) L-x(0,1)-A-[DEQRS] Occurences: 68(24) EXUR_ECOLI : 18- 21: rlyqq LaAD lkeri EXUR_ECOLI : 37- 40: lvgdk LpAE rfiad EXUR_ECOLI : 103- 106: gpfel LqAR qlies EXUR_ECOLI : 246- 249: nadry LfAE npvvh FADR_ECOLI : 30- 33: ppgti LpAE relse FADR_ECOLI : 54- 56: evlqr L-AR dgwlt FADR_ECOLI : 85- 87: nilet L-AR ldhes FADR_HAEIN : 8- 11: nnndi LkAQ spaal FADR_HAEIN : 16- 18: qspaa L-AE eyivk FADR_HAEIN : 42- 44: pserd L-AD kigvt FADR_HAEIN : 60- 62: evlqr L-AR dgwlt FADR_HAEIN : 132- 135: qksta LfAE leqlq FARR_ECOLI : 232- 235: dykft LiAQ rkssr GNTR_BACLI : 47- 50: lsenk LaAE fsvsr GNTR_BACLI : 65- 67: ealki L-AS ekiir GNTR_BACSU : 65- 67: ealki L-AS ekiir HUTC_KLEAE : 42- 45: pseae LvAQ fgfsr HUTC_PSEPU : 9- 12: ppvsa LvAQ mgegp HUTC_PSEPU : 20- 23: egpap LyAR vkqmi HUTC_PSEPU : 67- 70: ralre LtAD gllvr HUTC_PSEPU : 197- 199: vveai L-AE peecr KORA_STRLI : 37- 40: psvrd LaAQ yeist KORA_STRLI : 55- 58: kvhrt LkAE glaea KORA_STRLI : 60- 62: lkaeg L-AE akqgs KORA_STRLI : 108- 110: itsaa L-AE ppewv KORA_STRLI : 152- 154: wfsad L-AE tvpal LLDR_ECOLI : 31- 34: eagmk LpAE rqlam LLDR_ECOLI : 90- 93: qplkt LmAD dpdys LLDR_ECOLI : 102- 105: ysfdi LeAR yaiea PDHR_ECOLI : 136- 138: hhaie L-AQ qsgdl PDHR_ECOLI : 143- 146: qqsgd LdAE snavl PDHR_ECOLI : 177- 179: cmepm L-AQ nvrqn PHNF_ECOLI : 35- 38: rcgdy LpAE qqlaa PHNF_ECOLI : 41- 44: paeqq LaAR fevnr PHNF_ECOLI : 84- 87: pfdyp LnAQ arfsq PTSJ_SALTY : 23- 26: iiagt LrAE dslpp PTSJ_SALTY : 35- 37: ppvre L-AS elkvn PTSJ_SALTY : 58- 60: litag L-AQ slgrn PTSJ_SALTY : 229- 232: ptgcs LsAR raaal PTSJ_SALTY : 241- 243: alqnm L-AR ypqvv PTSJ_SALTY : 349- 351: arqqk L-AR alqqy PTSJ_SALTY : 420- 423: seint LaAD ihqal UXUR_ECOLI : 99- 102: gpfel LqAR qlles UXUR_ECOLI : 136- 138: leere L-AS sapgs UXUR_HAEIN : 111- 114: gpfel LqAR qlles UXUR_HAEIN : 165- 167: dfhla L-AE itqnd YCBG_BACSU : 203- 205: kiyda L-AQ rdpyk YFXA_BACSU : 34- 37: psehe LtAQ ygtsr YHCK_ECOLI : 27- 29: lrsrp L-AR kklse YHCK_ECOLI : 179- 181: dfhrv L-AE ipgnp YHFR_ECOLI : 81- 84: kaisd LvAD gvlir YIDP_ECOLI : 31- 33: pgekk L-AE efavs YIDP_ECOLI : 180- 182: sltpv L-AD rllar YIDP_ECOLI : 184- 187: vladr LlAR qmkva YIDP_ECOLI : 185- 187: ladrl L-AR qmkva YIDW_ECOLI : 28- 31: vpgsp LpAE aelce YIDW_ECOLI : 122- 124: atssd L-AQ iesal YIHL_ECOLI : 54- 57: qalln LeAE skifr YIHL_ECOLI : 81- 84: nyspe LsAS fqraa YIN1_STRAM : 37- 40: lsene LaAS mgvsr YIN1_STRAM : 54- 57: resli LlAQ eglvq YIN1_STRAM : 55- 57: eslil L-AQ eglvq YIN1_STRAM : 97- 100: gslda LpAE ldpav YIN1_STRAM : 192- 194: egdvp L-AR tamrt YRDX_RHOSH : 21- 24: givda LeAD iragr YRDX_RHOSH : 243- 246: pttat LpAD rrrev YRDX_RHOSH : 279- 281: erlpa L-AE lapel YRDX_RHOSH : 348- 350: gtlta L-AS airae F 6: 8.3401 64( 24) L-x(3)-R Occurences: 64(24) EXUR_ECOLI : 37- 41: lvgdk LpaeR fiade EXUR_ECOLI : 102- 106: ygpfe LlqaR qlies FADR_ECOLI : 30- 34: ppgti LpaeR elsel FADR_ECOLI : 100- 104: qlidn LlsvR tnist FADR_HAEIN : 36- 40: pagsn LpseR dladk FARR_ECOLI : 210- 214: vsrgy LvdgR vfeys FARR_ECOLI : 232- 236: dykft LiaqR kssr GNTR_BACLI : 173- 177: mesfi LlsmR arlke GNTR_BACSU : 173- 177: mesfi LlsmR vrlke HUTC_KLEAE : 85- 89: kgqsa LfevR siaae HUTC_KLEAE : 109- 113: cevll LeetR adhiq HUTC_KLEAE : 208- 212: ahdpc LlirR rtwst HUTC_KLEAE : 209- 213: hdpcl LirrR twstt HUTC_PSEPU : 53- 57: elvne LgfsR mtinr HUTC_PSEPU : 206- 210: eecrl LqieR gepcl HUTC_PSEPU : 215- 219: rgepc LlirR rtwsg HUTC_PSEPU : 216- 220: gepcl LirrR twsgr KORA_STRLI : 31- 35: khgdt LpsvR dlaaq KORA_STRLI : 89- 93: rlesa LstgR iyadg KORA_STRLI : 160- 164: tvpal LvrdR iiggt LLDR_ECOLI : 31- 35: eagmk LpaeR qlamq LLDR_ECOLI : 41- 45: qlamq LgvsR nslre LLDR_ECOLI : 61- 65: vsegv LlsrR gggtf LLDR_ECOLI : 164- 168: hnivl LqtmR gffdv PDHR_ECOLI : 34- 38: rpgek LppeR elakq PDHR_ECOLI : 63- 67: leakg LllrR qgggt PDHR_ECOLI : 100- 104: esqyd LletR haleg PDHR_ECOLI : 167- 171: hnvvl LhllR cmepm PDHR_ECOLI : 187- 191: rqnfe LlysR remlp PDHR_ECOLI : 188- 192: qnfel LysrR emlpl PDHR_ECOLI : 233- 237: ieeil LdrsR eesrr PHNF_ECOLI : 74- 78: qgvgv LvlmR pfdyp PHNF_ECOLI : 107- 111: tsekl LsvlR pasgh PHNF_ECOLI : 132- 136: envih LrtlR rvngv PHNF_ECOLI : 207- 211: pnmsp LlcvR tlnhr PTSJ_SALTY : 29- 33: raeds LppvR elase PTSJ_SALTY : 39- 43: elase LkvnR ntvaa PTSJ_SALTY : 229- 233: ptgcs LsarR aaalq PTSJ_SALTY : 335- 339: eyqhr LtqtR lfyaa UXUR_ECOLI : 33- 37: npger LppeR eiaem UXUR_ECOLI : 43- 47: eiaem LdvtR tvvre UXUR_ECOLI : 62- 66: leikg LvevR rgagi UXUR_ECOLI : 98- 102: agpfe LlqaR qlles UXUR_ECOLI : 115- 119: aefaa LqatR edivk UXUR_HAEIN : 48- 52: sigdk LpteR eisek UXUR_HAEIN : 110- 114: vgpfe LlqaR qlles UXUR_HAEIN : 181- 185: klqeq LwqyR fnsam YCBG_BACSU : 51- 55: elmdi LhvsR pvlre YCBG_BACSU : 219- 223: hmyeh LkfvR dkilk YFXA_BACSU : 90- 94: dackr LakkR kqlyt YHCK_ECOLI : 55- 59: gegeq LpseR elmaf YHCK_ECOLI : 199- 203: alldw LiaaR ptvtd YHFR_ECOLI : 4- 8: mll LagkR pynps YHFR_ECOLI : 192- 196: sstyq LfqeR fdtrv YIDP_ECOLI : 54- 58: lvawg LvvrR hgsgt YIDW_ECOLI : 52- 56: evfrs LmakR liemk YIHL_ECOLI : 30- 34: tpggk LpseR elgel YIHL_ECOLI : 40- 44: elgel LgikR mtlrq YIN1_STRAM : 157- 161: aakgh LdraR rlglh YRDX_RHOSH : 36- 40: tpger LppqR aiaea YRDX_RHOSH : 117- 121: giasi LtspR gtlam YRDX_RHOSH : 173- 177: falca LllgR gdvva YRDX_RHOSH : 243- 247: pttat LpadR rreva YRDX_RHOSH : 271- 275: dpyap LrseR lpala G 7: 8.3401 54( 24) R-x-A Occurences: 54(24) EXUR_ECOLI : 55- 57: srtvv ReA iimle FADR_ECOLI : 53- 55: revlq RlA rdgwl FADR_ECOLI : 113- 115: stifi RtA frqhp FADR_HAEIN : 59- 61: revlq RlA rdgwl FARR_ECOLI : 47- 49: srvtv RqA lrqlv FARR_ECOLI : 220- 222: vfeys RnA fntdd GNTR_BACLI : 22- 24: astgv RvA celrm GNTR_BACLI : 59- 61: srspi ReA lkila GNTR_BACSU : 22- 24: astgv RvA yelrm GNTR_BACSU : 59- 61: srspv ReA lkila HUTC_KLEAE : 7- 9: faqqp RsA papfy HUTC_PSEPU : 89- 91: aepkg RsA lfevn KORA_STRLI : 79- 81: rrtlh RtA adrle KORA_STRLI : 179- 181: eaatg RrA vatee LLDR_ECOLI : 49- 51: srnsl ReA laklv LLDR_ECOLI : 105- 107: dilea RyA ieast LLDR_ECOLI : 215- 217: dadga RkA mmahl LLDR_ECOLI : 238- 240: dedqa RhA ritrl PDHR_ECOLI : 52- 54: srpsl ReA iqrle PDHR_ECOLI : 104- 106: dllet RhA legia PDHR_ECOLI : 218- 220: kpeea ReA shrhl PHNF_ECOLI : 53- 55: nrhtl RrA idqlv PHNF_ECOLI : 111- 113: llsvl RpA sghva PHNF_ECOLI : 189- 191: trisa RrA qakec PTSJ_SALTY : 135- 137: aarwl RdA tpvag PTSJ_SALTY : 183- 185: sinml RyA gfsas PTSJ_SALTY : 232- 234: cslsa RrA aalqn PTSJ_SALTY : 233- 235: slsar RaA alqnm PTSJ_SALTY : 289- 291: lgpdl RlA ivasd UXUR_ECOLI : 51- 53: trtvv ReA limle UXUR_ECOLI : 67- 69: lvevr RgA giyvl UXUR_ECOLI : 126- 128: divkm RqA lqlee UXUR_ECOLI : 214- 216: ikkda RaA klamw UXUR_HAEIN : 66- 68: srtiv ReA mvmle UXUR_HAEIN : 227- 229: nanea RkA mwqhl YCBG_BACSU : 59- 61: srpvl ReA lssle YCBG_BACSU : 108- 110: aiiea RmA lelgl YFXA_BACSU : 89- 91: kdack RlA kkrkq YHCK_ECOLI : 73- 75: grpsv ReA laalk YHCK_ECOLI : 137- 139: esslv RyA aehat YHFR_ECOLI : 75- 77: sriti RkA isdlv YIDP_ECOLI : 43- 45: srmti RkA idllv YIDP_ECOLI : 219- 221: ysvmf RnA seyqv YIDW_ECOLI : 139- 141: annqd ReA fnead YIHL_ECOLI : 48- 50: krmtl RqA llnle YIHL_ECOLI : 87- 89: sasfq RaA ieqgr YIN1_STRAM : 78- 80: rvdpa RvA daqfl YIN1_STRAM : 86- 88: daqfl ReA velgs YIN1_STRAM : 194- 196: dvpla RtA mrthl YRDX_RHOSH : 138- 140: gapad RtA aaswl YRDX_RHOSH : 148- 150: swlag RvA gasad YRDX_RHOSH : 302- 304: stpal RiA yvlap YRDX_RHOSH : 316- 318: aaaav RlA tvlrs YRDX_RHOSH : 390- 392: lpqrw RaA efadh H 8: 8.3401 46( 24) R-x(3)-R Occurences: 46(24) EXUR_ECOLI : 51- 55: eknvs RtvvR eaiim FADR_ECOLI : 44- 48: ligvt RttlR evlqr FADR_ECOLI : 113- 117: stifi RtafR qhpdk FADR_HAEIN : 50- 54: kigvt RttlR evlqr FARR_ECOLI : 43- 47: efgvs RvtvR qalrq FARR_ECOLI : 47- 51: srvtv RqalR qlveq FARR_ECOLI : 128- 132: vwhvk RvryR kqkpm FARR_ECOLI : 236- 240: tliaq RkssR GNTR_BACLI : 55- 59: efsvs RspiR ealki GNTR_BACSU : 55- 59: efsvs RspvR ealki HUTC_KLEAE : 31- 35: hsgvw RphdR ipsea HUTC_KLEAE : 234- 238: pgsry RlqgR fgs HUTC_PSEPU : 132- 136: laldm RegqR vfhsl HUTC_PSEPU : 241- 245: pgsrh RlegR fsk KORA_STRLI : 75- 79: tvstr RtlhR taadr LLDR_ECOLI : 45- 49: qlgvs RnslR ealak PDHR_ECOLI : 48- 52: qfdvs RpslR eaiqr PDHR_ECOLI : 237- 241: lldrs ReesR rersl PDHR_ECOLI : 244- 248: esrre RslrR leqrk PDHR_ECOLI : 248- 252: erslr RleqR kn PHNF_ECOLI : 26- 30: leqel RqhyR cgdyl PHNF_ECOLI : 49- 53: rfevn RhtlR raidq PHNF_ECOLI : 133- 137: nvihl RtlrR vngva PHNF_ECOLI : 181- 185: gialr RsqtR isarr PHNF_ECOLI : 185- 189: rrsqt RisaR raqak PTSJ_SALTY : 105- 109: lpdls RyfaR lsrtp UXUR_ECOLI : 47- 51: mldvt RtvvR ealim UXUR_HAEIN : 24- 28: enivn RtytR igqll UXUR_HAEIN : 62- 66: kfgvs RtivR eamvm YCBG_BACSU : 55- 59: ilhvs RpvlR ealss YFXA_BACSU : 42- 46: qygts RetvR krfic YHCK_ECOLI : 25- 29: rnlrs RplaR kklse YHCK_ECOLI : 69- 73: ffnvg RpsvR ealaa YHFR_ECOLI : 71- 75: qynvs RitiR kaisd YHFR_ECOLI : 196- 200: qlfqe RfdtR vvsdk YIDP_ECOLI : 9- 13: ksiae RlriR lnsad YIDP_ECOLI : 39- 43: efavs RmtiR kaidl YIDP_ECOLI : 183- 187: pvlad RllaR qmkva YIDW_ECOLI : 42- 46: efats RniiR evfrs YIDW_ECOLI : 46- 50: srnii RevfR slmak YIHL_ECOLI : 44- 48: llgik RmtlR qalln YIN1_STRAM : 7- 11: aqtng RtnrR diylk YIN1_STRAM : 45- 49: smgvs RtpvR eslil YIN1_STRAM : 194- 198: dvpla RtamR thlra YIN1_STRAM : 198- 202: artam RthlR avfdd YRDX_RHOSH : 353- 357: lasai RaenR qrqss I 9: 7.8401 118( 24) E-x(0,1)-L Occurences: 118(24) EXUR_ECOLI : 101- 102: nygpf E-L lqarq EXUR_ECOLI : 101- 103: nygpf ElL qarql FADR_ECOLI : 35- 36: lpaer E-L selig FADR_ECOLI : 38- 39: erels E-L igvtr FADR_ECOLI : 49- 51: rttlr EvL qrlar FADR_ECOLI : 83- 85: glnil EtL arldh FADR_ECOLI : 125- 127: pdkaq EvL atane FADR_ECOLI : 142- 143: adafa E-L dytif FADR_HAEIN : 55- 57: rttlr EvL qrlar FADR_HAEIN : 89- 91: gpnii EtL ialdm FADR_HAEIN : 135- 136: talfa E-L eqlqn FADR_HAEIN : 137- 139: lfael EqL qntaq FADR_HAEIN : 192- 193: ekkhr E-L tkqfy FADR_HAEIN : 233- 235: wkail ErL pqnls FARR_ECOLI : 22- 23: qiarg E-L kpgda FARR_ECOLI : 86- 88: ltsfd EkL sdrhv FARR_ECOLI : 98- 100: vdths EvL ifevi GNTR_BACLI : 26- 27: vrvac E-L rmrii GNTR_BACLI : 60- 62: rspir EaL kilas GNTR_BACLI : 104- 106: etfvf ErL granv GNTR_BACLI : 113- 114: ranvd E-L vtdls GNTR_BACLI : 195- 196: ildnh E-L yikai GNTR_BACLI : 225- 227: vqgkv EdL wlsqq GNTR_BACSU : 26- 27: vrvay E-L rmriv GNTR_BACSU : 60- 62: rspvr EaL kilas GNTR_BACSU : 104- 106: etfvf ErL vkidi GNTR_BACSU : 112- 114: vkidi EpL vkdls GNTR_BACSU : 195- 196: ildnh E-L yiqai GNTR_BACSU : 225- 227: vqdkv EdL wlsqq HUTC_KLEAE : 41- 42: ipsea E-L vaqfg HUTC_KLEAE : 59- 60: nralr E-L tdegl HUTC_KLEAE : 63- 65: reltd EgL lvrlq HUTC_KLEAE : 105- 107: hqhrc EvL lleet HUTC_PSEPU : 48- 49: vpses E-L vnelg HUTC_PSEPU : 52- 53: selvn E-L gfsrm HUTC_PSEPU : 66- 67: nralr E-L tadgl KORA_STRLI : 24- 25: kivsg E-L khgdt KORA_STRLI : 58- 60: rtlka EgL aeakq LLDR_ECOLI : 50- 52: rnslr EaL aklvs PDHR_ECOLI : 20- 22: ieqql EfL ilegt PDHR_ECOLI : 32- 34: tlrpg EkL ppere PDHR_ECOLI : 39- 40: lpper E-L akqfd PDHR_ECOLI : 88- 89: sdplv E-L lsdhp PDHR_ECOLI : 88- 90: sdplv ElL sdhpe PDHR_ECOLI : 129- 130: kerir E-L hhaie PDHR_ECOLI : 135- 136: lhhai E-L aqqsg PDHR_ECOLI : 186- 187: vrqnf E-L lysrr PDHR_ECOLI : 186- 188: vrqnf ElL ysrre PDHR_ECOLI : 193- 195: lysrr EmL plvss PDHR_ECOLI : 230- 232: lafie EiL ldrsr PHNF_ECOLI : 24- 25: akleq E-L rqhyr PHNF_ECOLI : 104- 106: shpts EkL lsvlr PTSJ_SALTY : 34- 35: lppvr E-L aselk PTSJ_SALTY : 38- 39: relas E-L kvnrn PTSJ_SALTY : 125- 126: apvsp E-L hawaa PTSJ_SALTY : 155- 157: aidai ErL lcahl PTSJ_SALTY : 202- 204: egmqp EkL eraln UXUR_ECOLI : 31- 33: pynpg ErL ppere UXUR_ECOLI : 41- 43: ereia EmL dvtrt UXUR_ECOLI : 52- 54: rtvvr EaL imlei UXUR_ECOLI : 97- 98: dagpf E-L lqarq UXUR_ECOLI : 97- 99: dagpf ElL qarql UXUR_ECOLI : 135- 136: qleer E-L assap UXUR_ECOLI : 166- 167: nsmlv E-L frqsw UXUR_ECOLI : 196- 198: slyrk EwL gdhkq UXUR_HAEIN : 75- 77: vmlev EkL vevkk UXUR_HAEIN : 109- 110: dvgpf E-L lqarq UXUR_HAEIN : 109- 111: dvgpf ElL qarql UXUR_HAEIN : 146- 147: lnrek E-L ltqnq UXUR_HAEIN : 146- 148: lnrek ElL tqnqd UXUR_HAEIN : 179- 181: lvklq EqL wqyrf UXUR_HAEIN : 243- 244: kvklf E-L sdved YCBG_BACSU : 3- 5: my EgL edlkv YCBG_BACSU : 6- 8: myegl EdL kvdtv YCBG_BACSU : 46- 47: lptem E-L mdilh YCBG_BACSU : 60- 62: rpvlr EaL sslet YCBG_BACSU : 66- 68: alssl EtL gvitr YCBG_BACSU : 112- 113: armal E-L glvti YCBG_BACSU : 126- 128: ekine EeL qrlqk YCBG_BACSU : 127- 128: kinee E-L qrlqk YCBG_BACSU : 217- 219: hyhmy EhL kfvrd YFXA_BACSU : 26- 28: rwkae EiL psehe YFXA_BACSU : 33- 34: lpseh E-L taqyg YFXA_BACSU : 107- 108: agpps E-L i YHCK_ECOLI : 38- 40: semve EeL eqmir YHCK_ECOLI : 39- 40: emvee E-L eqmir YHCK_ECOLI : 53- 55: efgeg EqL psere YHCK_ECOLI : 60- 61: lpser E-L maffn YHCK_ECOLI : 74- 76: rpsvr EaL aalkr YHCK_ECOLI : 106- 107: dtiig E-L sgmak YHCK_ECOLI : 125- 127: giahf EqL rlffe YHFR_ECOLI : 62- 63: ipten E-L ctqyn YHFR_ECOLI : 140- 142: aapfc EkL nipgn YHFR_ECOLI : 162- 164: myldk EpL fidss YHFR_ECOLI : 224- 225: kwlkc E-L geplf YHFR_ECOLI : 227- 229: kcelg EpL frisk YHFR_ECOLI : 248- 249: pvhvs E-L fcran YIDP_ECOLI : 8- 10: yksia ErL rirln YIDP_ECOLI : 82- 84: ltglv EvL krqgk YIDP_ECOLI : 174- 176: iggny EsL tpvla YIDP_ECOLI : 210- 212: ysesg EfL nysvm YIDW_ECOLI : 33- 34: lpaea E-L ceefa YIHL_ECOLI : 13- 15: venak EkL drwlk YIHL_ECOLI : 35- 36: lpser E-L gellg YIHL_ECOLI : 38- 39: erelg E-L lgikr YIHL_ECOLI : 38- 40: erelg ElL gikrm YIHL_ECOLI : 80- 81: fnysp E-L sasfq YIHL_ECOLI : 111- 113: tsdip EtL aplia YIHL_ECOLI : 124- 125: vtpst E-L yritg YIHL_ECOLI : 156- 158: apgfi EqL enhsf YIN1_STRAM : 25- 26: mvltl E-L apgaa YIN1_STRAM : 36- 37: alsen E-L aasmg YIN1_STRAM : 50- 52: rtpvr EsL illaq YIN1_STRAM : 58- 60: illaq EgL vqvfp YIN1_STRAM : 90- 91: lreav E-L gslda YIN1_STRAM : 100- 101: dalpa E-L dpavv YIN1_STRAM : 108- 109: pavvg E-L rdnlv YIN1_STRAM : 217- 218: rahsp E-L fatda YRDX_RHOSH : 34- 36: rvtpg ErL ppqra YRDX_RHOSH : 44- 46: qraia EaL gvdlt YRDX_RHOSH : 201- 202: aqqhl E-L apvam YRDX_RHOSH : 274- 276: aplrs ErL palae YRDX_RHOSH : 281- 282: lpala E-L apelt YRDX_RHOSH : 285- 286: aelap E-L twhia YRDX_RHOSH : 436- 438: rgmle EgL tqlsg J 10: 7.8401 52( 24) S-x(0,1)-E Occurences: 52(24) EXUR_ECOLI : 145- 146: qcfrd S-E wdlqf FADR_ECOLI : 37- 38: aerel S-E ligvt FADR_ECOLI : 200- 201: lsalc S-E gahdq FADR_ECOLI : 218- 220: ryghe SgE iwhrm FADR_HAEIN : 38- 39: gsnlp S-E rdlad FADR_HAEIN : 114- 115: lrskm S-E syiye FARR_ECOLI : 97- 98: hvdth S-E vlife FARR_ECOLI : 176- 177: mvidr S-E qeiip GNTR_BACLI : 43- 44: sgtil S-E nklaa GNTR_BACLI : 67- 68: lkila S-E kiirl GNTR_BACSU : 43- 44: sgtil S-E ntiaa GNTR_BACSU : 67- 68: lkila S-E kiirl HUTC_KLEAE : 22- 23: vkqai S-E kihsg HUTC_KLEAE : 38- 39: hdrip S-E aelva HUTC_PSEPU : 45- 46: hhrvp S-E selvn HUTC_PSEPU : 47- 48: rvpse S-E lvnel HUTC_PSEPU : 123- 124: eeaag S-E ralal KORA_STRLI : 2- 4: m SlE rtppy KORA_STRLI : 22- 24: kakiv SgE lkhgd LLDR_ECOLI : 9- 11: lprrl SdE vadrv LLDR_ECOLI : 57- 58: laklv S-E gvlls LLDR_ECOLI : 79- 80: rhdtw S-E qnivq LLDR_ECOLI : 137- 138: featl S-E dpdia LLDR_ECOLI : 253- 255: ehneh SrE kna PDHR_ECOLI : 236- 238: illdr SrE esrre PHNF_ECOLI : 103- 104: gshpt S-E kllsv PTSJ_SALTY : 37- 38: vrela S-E lkvnr PTSJ_SALTY : 123- 125: gdapv SpE lhawa PTSJ_SALTY : 196- 197: pvsvd S-E gmqpe PTSJ_SALTY : 415- 416: stlnd S-E intla UXUR_ECOLI : 143- 145: ssapg SsE sgdmq UXUR_ECOLI : 144- 145: sapgs S-E sgdmq UXUR_HAEIN : 55- 56: terei S-E kfgvs YCBG_BACSU : 64- 66: reals SlE tlgvi YFXA_BACSU : 30- 31: eeilp S-E helta YFXA_BACSU : 41- 43: aqygt SrE tvrkr YFXA_BACSU : 61- 63: visrk SgE kapsc YFXA_BACSU : 106- 107: sagpp S-E li YHCK_ECOLI : 33- 34: arkkl S-E mveee YHCK_ECOLI : 57- 58: geqlp S-E relma YHFR_ECOLI : 148- 149: nipgn S-E vfhlc YHFR_ECOLI : 247- 248: kpvhv S-E lfcra YIDP_ECOLI : 206- 207: tslsy S-E sgefl YIDP_ECOLI : 208- 210: lsyse SgE flnys YIDP_ECOLI : 222- 223: mfrna S-E yqvey YIDW_ECOLI : 99- 100: lisam S-E vrnlv YIHL_ECOLI : 32- 33: ggklp S-E relge YIHL_ECOLI : 78- 80: prfny SpE lsasf YIHL_ECOLI : 122- 124: iavtp StE lyrit YIN1_STRAM : 33- 34: pgaal S-E nelaa YIN1_STRAM : 215- 217: rirah SpE lfatd YRDX_RHOSH : 273- 274: yaplr S-E rlpal K 11: 7.8401 55( 24) P-x(1,2)-E Occurences: 55(24) EXUR_ECOLI : 38- 40: vgdkl Pa-E rfiad EXUR_ECOLI : 99- 101: fanyg Pf-E llqar FADR_ECOLI : 31- 33: pgtil Pa-E relse FADR_HAEIN : 37- 39: agsnl Ps-E rdlad FARR_ECOLI : 30- 32: pgdal Pt-E salqt FARR_ECOLI : 185- 187: iiplm Pt-E emsrl FARR_ECOLI : 185- 188: iiplm PteE msrll FARR_ECOLI : 200- 203: isqtk PilE kvsrg GNTR_BACLI : 57- 60: svsrs PirE alkil GNTR_BACLI : 166- 169: wnnlk PvmE sfill GNTR_BACSU : 57- 60: svsrs PvrE alkil GNTR_BACSU : 166- 169: wnnlk PvmE sfill HUTC_KLEAE : 12- 15: rsapa PfyE kvkqa HUTC_KLEAE : 37- 39: phdri Ps-E aelva HUTC_KLEAE : 178- 181: lslia PltE gehiv HUTC_PSEPU : 44- 46: phhrv Ps-E selvn HUTC_PSEPU : 185- 188: lsqva PltE gehvv HUTC_PSEPU : 200- 202: ailae Pe-E crllq KORA_STRLI : 111- 113: aalae Pp-E wvadl LLDR_ECOLI : 32- 34: agmkl Pa-E rqlam LLDR_ECOLI : 246- 248: ritrl Pg-E hnehs PDHR_ECOLI : 30- 32: egtlr Pg-E klppe PDHR_ECOLI : 35- 37: pgekl Pp-E relak PDHR_ECOLI : 36- 39: geklp PerE lakqf PDHR_ECOLI : 85- 88: qsfsd PlvE llsdh PDHR_ECOLI : 214- 216: imagk Pe-E areas PHNF_ECOLI : 36- 38: cgdyl Pa-E qqlaa PHNF_ECOLI : 101- 104: dqgsh PtsE kllsv PHNF_ECOLI : 222- 224: dgess Pa-E ysvsl PTSJ_SALTY : 31- 34: edslp PvrE lasel UXUR_ECOLI : 10- 13: tsaqr PyqE vgami UXUR_ECOLI : 29- 31: ktpyn Pg-E rlppe UXUR_ECOLI : 34- 36: pgerl Pp-E reiae UXUR_ECOLI : 35- 38: gerlp PerE iaeml UXUR_ECOLI : 95- 97: cndag Pf-E llqar UXUR_HAEIN : 49- 51: igdkl Pt-E reise UXUR_HAEIN : 107- 109: lpdvg Pf-E llqar YCBG_BACSU : 42- 44: agdkl Pt-E melmd YCBG_BACSU : 164- 167: lsann PvvE gmiqs YCBG_BACSU : 185- 188: idsqi PyrE rdvtv YFXA_BACSU : 29- 31: aeeil Ps-E helta YFXA_BACSU : 104- 107: tnsag PpsE li YFXA_BACSU : 105- 107: nsagp Ps-E li YHCK_ECOLI : 56- 58: egeql Ps-E relma YHCK_ECOLI : 234- 236: irrhd Pd-E adral YHFR_ECOLI : 58- 60: agqqi Pt-E nelct YHFR_ECOLI : 137- 140: rvsaa PfcE klnip YIDP_ECOLI : 26- 28: lnsll Pg-E kklae YIDW_ECOLI : 29- 31: pgspl Pa-E aelce YIHL_ECOLI : 31- 33: pggkl Ps-E relge YIHL_ECOLI : 121- 124: liavt PstE lyrit YIN1_STRAM : 47- 50: gvsrt PvrE slill YIN1_STRAM : 98- 100: sldal Pa-E ldpav YRDX_RHOSH : 32- 34: agrvt Pg-E rlppq YRDX_RHOSH : 100- 102: nippq Pa-E pdlrr YRDX_RHOSH : 417- 419: avsph Pa-E avris L 12: 7.8401 71( 24) S-x(0,1)-A Occurences: 71(24) EXUR_ECOLI : 162- 163: latqn S-A laaiv FADR_ECOLI : 6- 8: vikaq SpA gfaee FADR_ECOLI : 186- 188: npear SlA lgfyh FADR_ECOLI : 196- 197: fyhkl S-A lcseg FADR_HAEIN : 12- 14: ilkaq SpA alaee FADR_HAEIN : 98- 99: aldmq S-A pliid FADR_HAEIN : 129- 131: nspqk StA lfael FARR_ECOLI : 33- 34: alpte S-A lqtef GNTR_BACLI : 15- 17: pekwl SrA stgvr GNTR_BACSU : 15- 17: pakwl SkA stgvr HUTC_KLEAE : 8- 9: aqqpr S-A papfy HUTC_KLEAE : 38- 40: hdrip SeA elvaq HUTC_KLEAE : 83- 84: epkgq S-A lfevr HUTC_KLEAE : 90- 92: lfevr SiA aeiva HUTC_KLEAE : 222- 224: tthiv ShA rllfp HUTC_PSEPU : 7- 8: ptppv S-A lvaqm HUTC_PSEPU : 90- 91: epkgr S-A lfevn KORA_STRLI : 44- 46: aqyei StA taqkv KORA_STRLI : 67- 68: eakqg S-A ttvst KORA_STRLI : 87- 88: adrle S-A lstgr KORA_STRLI : 105- 106: yavit S-A alaep KORA_STRLI : 105- 107: yavit SaA laepp KORA_STRLI : 135- 136: ervth S-A ddqpv KORA_STRLI : 142- 143: ddqpv S-A svswf KORA_STRLI : 149- 150: svswf S-A dlaet KORA_STRLI : 171- 172: iggtp S-A ieaat KORA_STRLI : 229- 231: ievge SvA pagrw LLDR_ECOLI : 111- 113: yaiea StA whaam LLDR_ECOLI : 144- 146: dpdia SqA dvrfh PDHR_ECOLI : 147- 149: dldae SnA vlqyq PHNF_ECOLI : 187- 188: sqtri S-A rraqa PHNF_ECOLI : 221- 223: rdges SpA eysvs PTSJ_SALTY : 148- 150: eidit SgA idaie PTSJ_SALTY : 167- 169: llpgd SvA vedpc PTSJ_SALTY : 188- 189: ryagf S-A spvsv PTSJ_SALTY : 230- 231: tgcsl S-A rraaa PTSJ_SALTY : 297- 298: ivasd S-A tsakl PTSJ_SALTY : 300- 301: sdsat S-A klrlr PTSJ_SALTY : 376- 378: pldth SqA taftl PTSJ_SALTY : 399- 400: eafgv S-A pshgl UXUR_ECOLI : 3- 4: mk S-A tsaqr UXUR_ECOLI : 6- 7: mksat S-A qrpyq UXUR_ECOLI : 138- 140: erela SsA pgsse UXUR_ECOLI : 139- 140: relas S-A pgsse UXUR_HAEIN : 120- 122: qlles SiA efaal UXUR_HAEIN : 156- 157: nqddy S-A dkdfh UXUR_HAEIN : 188- 189: qyrfn S-A mwaql UXUR_HAEIN : 216- 217: hqtil S-A iqkkn YCBG_BACSU : 160- 161: riial S-A nnpvv YFXA_BACSU : 101- 102: qlytn S-A gppse YHCK_ECOLI : 15- 17: qteds SpA igrnl YHCK_ECOLI : 99- 100: rvsrp S-A dtiig YHCK_ECOLI : 249- 250: hlnsv S-A twhaf YHFR_ECOLI : 24- 25: sgsim S-A tdrys YHFR_ECOLI : 134- 135: eqerv S-A apfce YHFR_ECOLI : 134- 136: eqerv SaA pfcek YIDP_ECOLI : 5- 7: miyk SiA erlri YIDP_ECOLI : 16- 17: rirln S-A dftln YIDW_ECOLI : 96- 97: dprli S-A msevr YIDW_ECOLI : 127- 128: laqie S-A lnemi YIDW_ECOLI : 166- 168: vlqql SiA isslq YIHL_ECOLI : 82- 83: yspel S-A sfqra YIHL_ECOLI : 164- 165: enhsf S-A vwekc YIHL_ECOLI : 198- 199: kylgg S-A gmpai YIN1_STRAM : 170- 172: lhenv SpA vfvaq YRDX_RHOSH : 67- 68: rrglv S-A qvgrg YRDX_RHOSH : 153- 154: rvaga S-A drivv YRDX_RHOSH : 161- 163: rivvt SgA qaalf YRDX_RHOSH : 350- 351: ltala S-A iraen YRDX_RHOSH : 361- 363: nrqrq SsA asifs YRDX_RHOSH : 362- 363: rqrqs S-A asifs YRDX_RHOSH : 362- 364: rqrqs SaA sifsg YRDX_RHOSH : 409- 410: aivpa S-A favsp YRDX_RHOSH : 452- 454: qpavg SrA vv M 13: 7.8401 87( 24) L-x(3,4)-S Occurences: 87(24) EXUR_ECOLI : 157- 162: hiqva LatqnS alaai EXUR_ECOLI : 230- 235: ntkim LfnetS ddfef EXUR_ECOLI : 255- 260: npvvh LdtatS gsk FADR_ECOLI : 88- 92: etlar Ldhe-S vpqli FADR_ECOLI : 151- 155: tifrg Lafa-S gnpiy FADR_ECOLI : 195- 200: gfyhk LsalcS egahd FADR_HAEIN : 8- 12: nnndi Lkaq-S paala FADR_HAEIN : 94- 98: etlia Ldmq-S aplii FADR_HAEIN : 107- 111: iidnm Lslr-S kmses FADR_HAEIN : 109- 114: dnmls LrskmS esyiy FADR_HAEIN : 168- 172: kpfyr Lifn-S lkgvy FADR_HAEIN : 235- 240: ailer LpqnlS d FARR_ECOLI : 29- 33: kpgda Lpte-S alqte FARR_ECOLI : 192- 196: eemsr Llni-S qtkpi FARR_ECOLI : 202- 206: qtkpi Lekv-S rgylv GNTR_BACLI : 14- 18: ypekw Lsra-S tgvrv GNTR_BACLI : 47- 52: lsenk LaaefS vsrsp GNTR_BACLI : 62- 67: pirea LkilaS ekiir GNTR_BACLI : 114- 119: anvde LvtdlS kilem GNTR_BACLI : 208- 212: tkdrd Lmlk-S lhqnf GNTR_BACSU : 14- 18: ypakw Lska-S tgvrv GNTR_BACSU : 62- 67: pvrea LkilaS ekiir GNTR_BACSU : 114- 119: idiep LvkdlS kilem GNTR_BACSU : 208- 212: tkdra Lmiq-S lhqnf HUTC_KLEAE : 85- 90: kgqsa LfevrS iaaei HUTC_KLEAE : 226- 231: vshar LlfpgS ryrlq HUTC_KLEAE : 227- 231: sharl Lfpg-S ryrlq HUTC_PSEPU : 233- 238: vtaar LihpgS rhrle HUTC_PSEPU : 242- 247: gsrhr LegrfS k KORA_STRLI : 85- 90: taadr LesalS tgriy KORA_STRLI : 118- 123: ewvad LlgteS gqavr KORA_STRLI : 119- 123: wvadl Lgte-S gqavr LLDR_ECOLI : 4- 9: miv LprrlS devad LLDR_ECOLI : 52- 57: slrea LaklvS egvll PDHR_ECOLI : 78- 83: fvqss LwqsfS dplve PDHR_ECOLI : 86- 91: sfsdp LvellS dhpes PDHR_ECOLI : 136- 140: hhaie Laqq-S gdlda PDHR_ECOLI : 143- 147: qqsgd Ldae-S navlq PDHR_ECOLI : 195- 199: srrem Lplv-S shrtr PDHR_ECOLI : 195- 200: srrem LplvsS hrtri PDHR_ECOLI : 232- 236: fieei Lldr-S reesr PHNF_ECOLI : 94- 99: rfsqn LldqgS hptse PHNF_ECOLI : 95- 99: fsqnl Ldqg-S hptse PHNF_ECOLI : 110- 114: kllsv Lrpa-S ghvad PHNF_ECOLI : 159- 164: tlwpt LqrfdS gslhd PTSJ_SALTY : 23- 28: iiagt LraedS lppvr PTSJ_SALTY : 87- 91: dphtp Lhdl-S ggnpd PTSJ_SALTY : 100- 104: pdpqr Lpdl-S ryfar PTSJ_SALTY : 162- 167: llcah LlpgdS vaved PTSJ_SALTY : 163- 167: lcahl Lpgd-S vaved PTSJ_SALTY : 257- 261: ddhfa Llss-S pwqpv PTSJ_SALTY : 290- 295: gpdlr LaivaS dsats PTSJ_SALTY : 307- 311: klrlr Lnag-S qwvsh PTSJ_SALTY : 372- 376: nawlp Ldth-S qataf PTSJ_SALTY : 405- 410: apshg LritlS tlnds UXUR_ECOLI : 74- 79: agiyv LdnsgS qntds UXUR_ECOLI : 167- 171: smlve Lfrq-S wqwre UXUR_ECOLI : 231- 235: nvkqr Llef-S nvddi UXUR_HAEIN : 33- 38: rigql LkqdiS qgiys UXUR_HAEIN : 116- 120: lqarq Lles-S iaefa UXUR_HAEIN : 241- 245: nvkvk Lfel-S dvedp YCBG_BACSU : 58- 63: vsrpv LrealS sletl YFXA_BACSU : 97- 101: kkrkq Lytn-S agpps YHCK_ECOLI : 129- 133: feqlr Lffe-S slvry YHCK_ECOLI : 129- 134: feqlr LffesS lvrya YHCK_ECOLI : 155- 159: llaka Lein-S qsldn YHCK_ECOLI : 245- 249: alqsh Lnsv-S atwha YHFR_ECOLI : 106- 110: kvena Lltv-S gftdf YHFR_ECOLI : 164- 168: ldkep Lfid-S swipl YHFR_ECOLI : 164- 169: ldkep LfidsS wipls YHFR_ECOLI : 229- 233: elgep Lfri-S kiafd YIDP_ECOLI : 71- 76: vrkdv LhqtaS ltglv YIDP_ECOLI : 133- 138: vegkp LmledS ympvk YIDP_ECOLI : 144- 149: ympvk LfrnlS lqhle YIDP_ECOLI : 197- 202: aehtp LlritS lsyse YIDP_ECOLI : 198- 202: ehtpl Lrit-S lsyse YIDP_ECOLI : 203- 208: lrits LsyseS gefln YIDP_ECOLI : 233- 238: yhlrr LhpekS YIDW_ECOLI : 94- 99: dydpr LisamS evrnl YIDW_ECOLI : 122- 127: atssd LaqieS alnem YIDW_ECOLI : 162- 166: vhnpv Lqql-S iaiss YIDW_ECOLI : 165- 170: pvlqq LsiaiS slqag YIHL_ECOLI : 54- 58: qalln Leae-S kifrk YIHL_ECOLI : 158- 162: gfieq Lenh-S fsavw YIN1_STRAM : 137- 141: afhqg Lmrl-S ghgnv YIN1_STRAM : 165- 170: arrlg LhenvS pavfv YRDX_RHOSH : 229- 234: rapkl LylipS idnpt YRDX_RHOSH : 293- 297: whiat Lskc-S tpalr YRDX_RHOSH : 345- 350: itdgt LtalaS airae YRDX_RHOSH : 438- 442: mleeg Ltql-S glltq N 14: 7.8401 84( 24) L-x(2,3)-S Occurences: 84(24) EXUR_ECOLI : 108- 111: lqarq Lie-S niaef FADR_ECOLI : 88- 92: etlar LdheS vpqli FADR_ECOLI : 151- 155: tifrg LafaS gnpiy FADR_HAEIN : 8- 12: nnndi LkaqS paala FADR_HAEIN : 94- 98: etlia LdmqS aplii FADR_HAEIN : 107- 111: iidnm LslrS kmses FADR_HAEIN : 168- 172: kpfyr LifnS lkgvy FADR_HAEIN : 222- 225: irkhn Lrs-S tywka FARR_ECOLI : 29- 33: kpgda LpteS alqte FARR_ECOLI : 192- 196: eemsr LlniS qtkpi FARR_ECOLI : 193- 196: emsrl Lni-S qtkpi FARR_ECOLI : 202- 206: qtkpi LekvS rgylv GNTR_BACLI : 14- 18: ypekw LsraS tgvrv GNTR_BACLI : 35- 38: riisg Lie-S gtils GNTR_BACLI : 208- 212: tkdrd LmlkS lhqnf GNTR_BACLI : 227- 230: gkved Lwl-S qqmla GNTR_BACSU : 14- 18: ypakw LskaS tgvrv GNTR_BACSU : 35- 38: rivsg Lie-S gtils GNTR_BACSU : 208- 212: tkdra LmiqS lhqnf GNTR_BACSU : 227- 230: dkved Lwl-S qqmla HUTC_KLEAE : 227- 231: sharl LfpgS ryrlq HUTC_PSEPU : 53- 56: elvne Lgf-S rmtin KORA_STRLI : 119- 123: wvadl LgteS gqavr LLDR_ECOLI : 41- 44: qlamq Lgv-S rnslr LLDR_ECOLI : 174- 177: gffdv Lqs-S vkhsr PDHR_ECOLI : 78- 81: fvqss Lwq-S fsdpl PDHR_ECOLI : 136- 140: hhaie LaqqS gdlda PDHR_ECOLI : 143- 147: qqsgd LdaeS navlq PDHR_ECOLI : 187- 190: rqnfe Lly-S rreml PDHR_ECOLI : 195- 199: srrem LplvS shrtr PDHR_ECOLI : 197- 200: remlp Lvs-S hrtri PDHR_ECOLI : 232- 236: fieei LldrS reesr PDHR_ECOLI : 233- 236: ieeil Ldr-S reesr PHNF_ECOLI : 95- 99: fsqnl LdqgS hptse PHNF_ECOLI : 110- 114: kllsv LrpaS ghvad PHNF_ECOLI : 179- 182: qtgia Lrr-S qtris PTSJ_SALTY : 58- 61: litag Laq-S lgrng PTSJ_SALTY : 87- 91: dphtp LhdlS ggnpd PTSJ_SALTY : 100- 104: pdpqr LpdlS ryfar PTSJ_SALTY : 163- 167: lcahl LpgdS vaved PTSJ_SALTY : 257- 260: ddhfa Lls-S spwqp PTSJ_SALTY : 257- 261: ddhfa LlssS pwqpv PTSJ_SALTY : 258- 261: dhfal Lss-S pwqpv PTSJ_SALTY : 307- 311: klrlr LnagS qwvsh PTSJ_SALTY : 372- 376: nawlp LdthS qataf PTSJ_SALTY : 383- 386: ataft Lak-S gwlvr PTSJ_SALTY : 412- 415: itlst Lnd-S eintl UXUR_ECOLI : 74- 77: agiyv Ldn-S gsqnt UXUR_ECOLI : 104- 107: lqarq Lle-S niaef UXUR_ECOLI : 136- 139: leere Las-S apgss UXUR_ECOLI : 167- 171: smlve LfrqS wqwre UXUR_ECOLI : 188- 191: qlhsh Ldd-S lyrke UXUR_ECOLI : 231- 235: nvkqr LlefS nvddi UXUR_ECOLI : 232- 235: vkqrl Lef-S nvddi UXUR_ECOLI : 246- 249: yfdgy Lfd-S wpldk UXUR_HAEIN : 116- 119: lqarq Lle-S siaef UXUR_HAEIN : 116- 120: lqarq LlesS iaefa UXUR_HAEIN : 117- 120: qarql Les-S iaefa UXUR_HAEIN : 241- 245: nvkvk LfelS dvedp YCBG_BACSU : 29- 32: erivh Lls-S gqlra YCBG_BACSU : 51- 54: elmdi Lhv-S rpvlr YFXA_BACSU : 97- 101: kkrkq LytnS agpps YHCK_ECOLI : 129- 133: feqlr LffeS slvry YHCK_ECOLI : 155- 159: llaka LeinS qsldn YHCK_ECOLI : 245- 249: alqsh LnsvS atwha YHFR_ECOLI : 106- 110: kvena LltvS gftdf YHFR_ECOLI : 107- 110: venal Ltv-S gftdf YHFR_ECOLI : 164- 168: ldkep LfidS swipl YHFR_ECOLI : 229- 233: elgep LfriS kiafd YIDP_ECOLI : 135- 138: gkplm Led-S ympvk YIDP_ECOLI : 153- 156: lslqh Leg-S kfeyi YIDP_ECOLI : 198- 202: ehtpl LritS lsyse YIDP_ECOLI : 203- 206: lrits Lsy-S esgef YIDP_ECOLI : 212- 215: esgef Lny-S vmfrn YIDW_ECOLI : 162- 166: vhnpv LqqlS iaiss YIHL_ECOLI : 54- 58: qalln LeaeS kifrk YIHL_ECOLI : 81- 84: nyspe Lsa-S fqraa YIHL_ECOLI : 158- 162: gfieq LenhS fsavw YIHL_ECOLI : 195- 198: disky Lgg-S agmpa YIN1_STRAM : 37- 40: lsene Laa-S mgvsr YIN1_STRAM : 137- 141: afhqg LmrlS ghgnv YRDX_RHOSH : 90- 93: gggtp Ldl-S mnipp YRDX_RHOSH : 231- 234: pklly Lip-S idnpt YRDX_RHOSH : 293- 297: whiat LskcS tpalr YRDX_RHOSH : 321- 324: rlatv Lrs-S vlmap YRDX_RHOSH : 438- 442: mleeg LtqlS glltq O 15: 7.8401 113( 24) L-x(4,5)-A Occurences: 113(24) EXUR_ECOLI : 14- 19: teprr Lyqql-A adlke EXUR_ECOLI : 14- 20: teprr LyqqlaA dlker EXUR_ECOLI : 108- 114: lqarq LiesniA efaat EXUR_ECOLI : 157- 163: hiqva LatqnsA laaiv FADR_ECOLI : 198- 203: hklsa Lcseg-A hdqvy FADR_ECOLI : 229- 234: rmqkn Lpgdl-A iqgr FADR_HAEIN : 8- 14: nnndi LkaqspA alaee FADR_HAEIN : 94- 99: etlia Ldmqs-A pliid FADR_HAEIN : 206- 212: mqqic LegnadA vvdci FARR_ECOLI : 6- 11: mghkp Lyrqi-A drire FARR_ECOLI : 23- 28: iarge Lkpgd-A lptes FARR_ECOLI : 29- 34: kpgda Lptes-A lqtef GNTR_BACLI : 42- 48: esgti LsenklA aefsv GNTR_BACLI : 73- 78: ekiir Lermg-A vvigl GNTR_BACLI : 173- 178: mesfi Llsmr-A rlkek GNTR_BACLI : 229- 235: vedlw LsqqmlA kgaeq GNTR_BACSU : 42- 48: esgti LsentiA aefsv GNTR_BACSU : 73- 78: ekiir Lermg-A vvigl GNTR_BACSU : 83- 89: avvig LtekkiA eiydv GNTR_BACSU : 229- 235: vedlw LsqqmlA kgaey HUTC_KLEAE : 108- 114: rcevl LleetrA dhiqa HUTC_KLEAE : 109- 114: cevll Leetr-A dhiqa HUTC_KLEAE : 160- 166: vvpdy LhqdytA ttphd HUTC_KLEAE : 198- 203: aeeca Llhih-A hdpcl HUTC_PSEPU : 64- 69: tinra Lrelt-A dgllv HUTC_PSEPU : 116- 121: cqvit Lteea-A gsera KORA_STRLI : 10- 15: rtppy Lqvva-A lkaki KORA_STRLI : 55- 61: kvhrt LkaeglA eakqg KORA_STRLI : 77- 82: strrt Lhrta-A drles KORA_STRLI : 152- 158: wfsad LaetvpA llvrd KORA_STRLI : 200- 205: edqaa Llgva-A gapvl KORA_STRLI : 201- 207: dqaal LgvaagA pvlls LLDR_ECOLI : 8- 13: vlprr Lsdev-A drvra LLDR_ECOLI : 48- 53: vsrns Lreal-A klvse LLDR_ECOLI : 87- 92: nivqp Lktlm-A ddpdy LLDR_ECOLI : 102- 107: ysfdi Leary-A ieast LLDR_ECOLI : 152- 157: dvrfh Laiae-A shniv LLDR_ECOLI : 195- 201: pvfsq LteqhqA vidai PDHR_ECOLI : 100- 106: esqyd LletrhA legia PDHR_ECOLI : 101- 106: sqydl Letrh-A legia PDHR_ECOLI : 107- 112: etrha Legia-A yyaal PDHR_ECOLI : 143- 149: qqsgd LdaesnA vlqyq PDHR_ECOLI : 151- 156: esnav Lqyqi-A vteaa PHNF_ECOLI : 107- 113: tsekl LsvlrpA sghva PHNF_ECOLI : 145- 151: gvalc LidhyfA dltlw PTSJ_SALTY : 53- 59: aaykr LitaglA qslgr PTSJ_SALTY : 103- 108: qrlpd Lsryf-A rlsrt PTSJ_SALTY : 126- 131: pvspe Lhawa-A rwlrd PTSJ_SALTY : 163- 169: lcahl LpgdsvA vedpc PTSJ_SALTY : 208- 214: klera LnqgarA viltp PTSJ_SALTY : 229- 234: ptgcs Lsarr-A aalqn PTSJ_SALTY : 229- 235: ptgcs LsarraA alqnm PTSJ_SALTY : 237- 242: rraaa Lqnml-A rypqv PTSJ_SALTY : 288- 294: tlgpd LrlaivA sdsat PTSJ_SALTY : 303- 309: atsak LrlrlnA gsqwv PTSJ_SALTY : 318- 324: wvshl LqdlvyA cltdp PTSJ_SALTY : 353- 359: klara LqqygiA ispgd PTSJ_SALTY : 372- 378: nawlp LdthsqA taftl PTSJ_SALTY : 389- 395: aksgw LvregeA fgvsa UXUR_ECOLI : 104- 110: lqarq LlesniA efaal UXUR_ECOLI : 105- 110: qarql Lesni-A efaal UXUR_ECOLI : 131- 137: rqalq LeerelA ssapg UXUR_ECOLI : 153- 158: dmqfh Laiae-A thnsm UXUR_ECOLI : 208- 213: qilaa Likkd-A raakl UXUR_ECOLI : 252- 257: fdswp Ldkvd-A UXUR_HAEIN : 116- 122: lqarq LlessiA efaal UXUR_HAEIN : 117- 122: qarql Lessi-A efaal YCBG_BACSU : 101- 107: latdn LpaiieA rmale YCBG_BACSU : 113- 119: rmale LglvtiA aekin YCBG_BACSU : 115- 120: alelg Lvtia-A ekine YCBG_BACSU : 173- 178: gmiqs Llith-A kidsq YFXA_BACSU : 80- 86: sfvsg LvsfkdA ckrla YFXA_BACSU : 97- 102: kkrkq Lytns-A gppse YHCK_ECOLI : 22- 28: aigrn LrsrplA rkkls YHCK_ECOLI : 135- 140: ffess Lvrya-A ehatd YHCK_ECOLI : 162- 167: insqs Ldnna-A firsd YHCK_ECOLI : 195- 201: aihva LldwliA arptv YHCK_ECOLI : 196- 201: ihval Ldwli-A arptv YHCK_ECOLI : 196- 202: ihval LdwliaA rptvt YHCK_ECOLI : 245- 250: alqsh Lnsvs-A twhaf YHFR_ECOLI : 42- 47: tvrqr Llddi-A qgvyq YIDP_ECOLI : 31- 36: pgekk Laeef-A vsrmt YIDP_ECOLI : 176- 181: gnyes Ltpvl-A drlla YIDP_ECOLI : 180- 186: sltpv LadrllA rqmkv YIDW_ECOLI : 34- 39: paeae Lceef-A tsrni YIDW_ECOLI : 104- 110: sevrn LvepaiA vaxae YIDW_ECOLI : 122- 128: atssd LaqiesA lnemi YIDW_ECOLI : 129- 134: qiesa Lnemi-A nnqdr YIDW_ECOLI : 162- 168: vhnpv LqqlsiA isslq YIHL_ECOLI : 51- 56: tlrqa Llnle-A eskif YIHL_ECOLI : 113- 118: dipet Lapli-A vtpst YIHL_ECOLI : 205- 211: gmpai LiekhrA dqqgn YIN1_STRAM : 22- 27: lrqmv Ltlel-A pgaal YIN1_STRAM : 24- 30: qmvlt LelapgA alsen YIN1_STRAM : 26- 31: vltle Lapga-A lsene YIN1_STRAM : 32- 38: apgaa LsenelA asmgv YIN1_STRAM : 91- 96: reave Lgsld-A lpael YIN1_STRAM : 94- 99: velgs Ldalp-A eldpa YIN1_STRAM : 218- 223: ahspe Lfatd-A atvpv YIN1_STRAM : 218- 224: ahspe LfatdaA tvpvr YRDX_RHOSH : 15- 20: arlky Lgivd-A leadi YRDX_RHOSH : 21- 27: givda LeadirA grvtp YRDX_RHOSH : 36- 41: tpger Lppqr-A iaeal YRDX_RHOSH : 50- 56: algvd LttvtrA lneaq YRDX_RHOSH : 109- 114: dlrri Lpqgi-A silts YRDX_RHOSH : 145- 150: aaasw Lagrv-A gasad YRDX_RHOSH : 167- 172: gaqaa Lfalc-A lllgr YRDX_RHOSH : 191- 196: vtypg Lkava-A qqhle YRDX_RHOSH : 200- 206: aaqqh LelapvA mdeqg YRDX_RHOSH : 213- 219: deqgi LpeafeA vcrer YRDX_RHOSH : 286- 291: elape Ltwhi-A tlskc YRDX_RHOSH : 307- 312: riayv Lapna-A aavrl YRDX_RHOSH : 307- 313: riayv LapnaaA avrla YRDX_RHOSH : 345- 351: itdgt LtalasA iraen YRDX_RHOSH : 348- 354: gtlta LasairA enrqr YRDX_RHOSH : 385- 391: hlwlh LpqrwrA aefad YRDX_RHOSH : 403- 408: aerag Laivp-A safav YRDX_RHOSH : 444- 449: tqlsg Lltqp-A vgsra P 16: 7.8401 108( 24) L-x(3,4)-A Occurences: 108(24) EXUR_ECOLI : 14- 19: teprr LyqqlA adlke FADR_ECOLI : 51- 55: tlrev Lqrl-A rdgwl FADR_ECOLI : 82- 86: sglni Letl-A rldhe FADR_ECOLI : 198- 203: hklsa LcsegA hdqvy FADR_ECOLI : 229- 234: rmqkn LpgdlA iqgr FADR_HAEIN : 57- 61: tlrev Lqrl-A rdgwl FADR_HAEIN : 94- 99: etlia LdmqsA pliid FADR_HAEIN : 139- 143: aeleq Lqnt-A qdyte FADR_HAEIN : 206- 210: mqqic Legn-A davvd FARR_ECOLI : 6- 11: mghkp LyrqiA drire FARR_ECOLI : 23- 28: iarge LkpgdA lptes FARR_ECOLI : 29- 34: kpgda LptesA lqtef GNTR_BACLI : 62- 66: pirea Lkil-A sekii GNTR_BACLI : 73- 78: ekiir LermgA vvigl GNTR_BACLI : 173- 178: mesfi LlsmrA rlkek GNTR_BACLI : 174- 178: esfil Lsmr-A rlkek GNTR_BACLI : 196- 200: ldnhe Lyik-A iktkd GNTR_BACLI : 234- 238: lsqqm Lakg-A eqend GNTR_BACSU : 7- 11: ldskd Llyp-A kwlsk GNTR_BACSU : 62- 66: pvrea Lkil-A sekii GNTR_BACSU : 73- 78: ekiir LermgA vvigl GNTR_BACSU : 196- 200: ldnhe Lyiq-A iktkd GNTR_BACSU : 234- 238: lsqqm Lakg-A eynnd HUTC_KLEAE : 109- 114: cevll LeetrA dhiqa HUTC_KLEAE : 173- 177: tphdy Lsli-A plteg HUTC_KLEAE : 198- 203: aeeca LlhihA hdpcl HUTC_KLEAE : 199- 203: eecal Lhih-A hdpcl HUTC_PSEPU : 64- 69: tinra LreltA dgllv HUTC_PSEPU : 116- 120: cqvit Ltee-A agser HUTC_PSEPU : 116- 121: cqvit LteeaA gsera HUTC_PSEPU : 180- 184: tpyay Lsqv-A plteg KORA_STRLI : 10- 14: rtppy Lqvv-A alkak KORA_STRLI : 10- 15: rtppy LqvvaA lkaki KORA_STRLI : 77- 81: strrt Lhrt-A adrle KORA_STRLI : 77- 82: strrt LhrtaA drles KORA_STRLI : 200- 204: edqaa Llgv-A agapv KORA_STRLI : 200- 205: edqaa LlgvaA gapvl KORA_STRLI : 201- 205: dqaal Lgva-A gapvl LLDR_ECOLI : 8- 13: vlprr LsdevA drvra LLDR_ECOLI : 48- 53: vsrns LrealA klvse LLDR_ECOLI : 87- 92: nivqp LktlmA ddpdy LLDR_ECOLI : 102- 107: ysfdi LearyA ieast LLDR_ECOLI : 130- 134: kekiq Lcfe-A tlsed LLDR_ECOLI : 152- 157: dvrfh LaiaeA shniv PDHR_ECOLI : 101- 106: sqydl LetrhA legia PDHR_ECOLI : 107- 111: etrha Legi-A ayyaa PDHR_ECOLI : 107- 112: etrha LegiaA yyaal PDHR_ECOLI : 151- 156: esnav LqyqiA vteaa PHNF_ECOLI : 84- 88: pfdyp Lnaq-A rfsqn PTSJ_SALTY : 103- 108: qrlpd LsryfA rlsrt PTSJ_SALTY : 116- 120: srtph Lygd-A pvspe PTSJ_SALTY : 126- 130: pvspe Lhaw-A arwlr PTSJ_SALTY : 126- 131: pvspe LhawaA rwlrd PTSJ_SALTY : 208- 212: klera Lnqg-A ravil PTSJ_SALTY : 217- 221: aravi Ltpr-A hnptg PTSJ_SALTY : 229- 234: ptgcs LsarrA aalqn PTSJ_SALTY : 237- 242: rraaa LqnmlA rypqv PTSJ_SALTY : 290- 294: gpdlr Laiv-A sdsat PTSJ_SALTY : 305- 309: saklr Lrln-A gsqwv PTSJ_SALTY : 340- 344: ltqtr Lfya-A rqqkl UXUR_ECOLI : 105- 110: qarql LesniA efaal UXUR_ECOLI : 136- 140: leere Lass-A pgsse UXUR_ECOLI : 153- 158: dmqfh LaiaeA thnsm UXUR_ECOLI : 208- 213: qilaa LikkdA raakl UXUR_ECOLI : 252- 257: fdswp LdkvdA UXUR_HAEIN : 117- 122: qarql LessiA efaal YCBG_BACSU : 115- 119: alelg Lvti-A aekin YCBG_BACSU : 115- 120: alelg LvtiaA ekine YCBG_BACSU : 173- 178: gmiqs LlithA kidsq YCBG_BACSU : 174- 178: miqsl Lith-A kidsq YFXA_BACSU : 97- 102: kkrkq LytnsA gppse YHCK_ECOLI : 107- 111: tiige Lsgm-A kdfls YHCK_ECOLI : 135- 139: ffess Lvry-A aehat YHCK_ECOLI : 135- 140: ffess LvryaA ehatd YHCK_ECOLI : 150- 154: deqid Llak-A leins YHCK_ECOLI : 162- 166: insqs Ldnn-A afirs YHCK_ECOLI : 162- 167: insqs LdnnaA firsd YHCK_ECOLI : 196- 201: ihval LdwliA arptv YHCK_ECOLI : 245- 250: alqsh LnsvsA twhaf YHFR_ECOLI : 42- 47: tvrqr LlddiA qgvyq YHFR_ECOLI : 43- 47: vrqrl Lddi-A qgvyq YHFR_ECOLI : 249- 253: vhvse Lfcr-A nritl YIDP_ECOLI : 31- 36: pgekk LaeefA vsrmt YIDP_ECOLI : 71- 75: vrkdv Lhqt-A sltgl YIDP_ECOLI : 176- 181: gnyes LtpvlA drlla YIDW_ECOLI : 28- 32: vpgsp Lpae-A elcee YIDW_ECOLI : 34- 39: paeae LceefA tsrni YIDW_ECOLI : 104- 108: sevrn Lvep-A iavax YIDW_ECOLI : 129- 134: qiesa LnemiA nnqdr YIHL_ECOLI : 51- 56: tlrqa LlnleA eskif YIHL_ECOLI : 52- 56: lrqal Lnle-A eskif YIHL_ECOLI : 113- 118: dipet LapliA vtpst YIHL_ECOLI : 195- 199: disky Lggs-A gmpai YIN1_STRAM : 22- 27: lrqmv LtlelA pgaal YIN1_STRAM : 26- 30: vltle Lapg-A alsen YIN1_STRAM : 26- 31: vltle LapgaA lsene YIN1_STRAM : 52- 56: pvres Lill-A qeglv YIN1_STRAM : 91- 96: reave LgsldA lpael YIN1_STRAM : 94- 99: velgs LdalpA eldpa YIN1_STRAM : 192- 196: egdvp Lart-A mrthl YIN1_STRAM : 218- 223: ahspe LfatdA atvpv YRDX_RHOSH : 6- 10: mwrph Lvdt-A rlkyl YRDX_RHOSH : 15- 20: arlky LgivdA leadi YRDX_RHOSH : 36- 41: tpger LppqrA iaeal YRDX_RHOSH : 109- 114: dlrri LpqgiA silts YRDX_RHOSH : 145- 150: aaasw LagrvA gasad YRDX_RHOSH : 167- 172: gaqaa LfalcA lllgr YRDX_RHOSH : 191- 195: vtypg Lkav-A aqqhl YRDX_RHOSH : 191- 196: vtypg LkavaA qqhle YRDX_RHOSH : 202- 206: qqhle Lapv-A mdeqg YRDX_RHOSH : 276- 280: lrser Lpal-A elape YRDX_RHOSH : 279- 283: erlpa Lael-A peltw YRDX_RHOSH : 286- 291: elape LtwhiA tlskc YRDX_RHOSH : 307- 311: riayv Lapn-A aaavr YRDX_RHOSH : 307- 312: riayv LapnaA aavrl YRDX_RHOSH : 345- 349: itdgt Ltal-A saira YRDX_RHOSH : 370- 374: sifsg Ldfa-A dpdgh YRDX_RHOSH : 403- 408: aerag LaivpA safav YRDX_RHOSH : 444- 449: tqlsg LltqpA vgsra YRDX_RHOSH : 445- 449: qlsgl Ltqp-A vgsra Q 17: 7.8401 116( 24) R-x(1,2)-L Occurences: 116(24) EXUR_ECOLI : 12- 14: eitep Rr-L yqqla EXUR_ECOLI : 106- 108: ellqa Rq-L iesni EXUR_ECOLI : 244- 246: efnad Ry-L faenp FADR_ECOLI : 34- 36: ilpae Re-L selig FADR_ECOLI : 44- 47: ligvt RttL revlq FADR_ECOLI : 48- 51: trttl RevL qrlar FADR_ECOLI : 149- 151: dytif Rg-L afasg FADR_ECOLI : 185- 187: anpea Rs-L algfy FADR_HAEIN : 40- 42: nlpse Rd-L adkig FADR_HAEIN : 50- 53: kigvt RttL revlq FADR_HAEIN : 54- 57: trttl RevL qrlar FADR_HAEIN : 179- 182: kgvyq RigL lffke FADR_HAEIN : 191- 193: kekkh Re-L tkqfy FARR_ECOLI : 20- 23: reqia RgeL kpgda FARR_ECOLI : 47- 50: srvtv RqaL rqlve FARR_ECOLI : 51- 53: vrqal Rq-L veqqi FARR_ECOLI : 191- 193: teems Rl-L nisqt FARR_ECOLI : 207- 210: lekvs RgyL vdgrv GNTR_BACLI : 59- 62: srspi ReaL kilas GNTR_BACLI : 177- 180: illsm RarL kekye GNTR_BACLI : 189- 191: yedfe Ri-L dnhel GNTR_BACLI : 206- 208: iktkd Rd-L mlksl GNTR_BACSU : 59- 62: srspv ReaL kilas GNTR_BACSU : 95- 97: eiydv Rl-L letfv GNTR_BACSU : 95- 98: eiydv RllL etfvf GNTR_BACSU : 177- 180: illsm RvrL kekye GNTR_BACSU : 189- 191: yedft Ri-L dnhel GNTR_BACSU : 206- 208: iktkd Ra-L miqsl HUTC_KLEAE : 55- 57: rmtin Ra-L reltd HUTC_KLEAE : 58- 60: inral Re-L tdegl HUTC_KLEAE : 225- 227: ivsha Rl-L fpgsr HUTC_KLEAE : 232- 235: lfpgs RyrL qgrfg HUTC_PSEPU : 62- 64: rmtin Ra-L relta HUTC_PSEPU : 65- 67: inral Re-L tadgl HUTC_PSEPU : 89- 92: aepkg RsaL fevnn HUTC_PSEPU : 125- 127: aagse Ra-L aldmr HUTC_PSEPU : 204- 206: epeec Rl-L qierg HUTC_PSEPU : 239- 242: ihpgs RhrL egrfs KORA_STRLI : 35- 37: tlpsv Rd-L aaqye KORA_STRLI : 53- 55: aqkvh Rt-L kaegl KORA_STRLI : 74- 77: ttvst RrtL hrtaa KORA_STRLI : 75- 77: tvstr Rt-L hrtaa LLDR_ECOLI : 6- 8: mivlp Rr-L sdeva LLDR_ECOLI : 17- 19: vadrv Ra-L idekn LLDR_ECOLI : 35- 37: klpae Rq-L amqlg LLDR_ECOLI : 45- 48: qlgvs RnsL reala LLDR_ECOLI : 49- 52: srnsl ReaL aklvs LLDR_ECOLI : 149- 152: sqadv RfhL aiaea LLDR_ECOLI : 184- 187: khsrq RmyL vppvf PDHR_ECOLI : 38- 40: klppe Re-L akqfd PDHR_ECOLI : 48- 51: qfdvs RpsL reaiq PDHR_ECOLI : 104- 107: dllet RhaL egiaa PDHR_ECOLI : 128- 130: dkeri Re-L hhaie PDHR_ECOLI : 192- 195: llysr RemL plvss PDHR_ECOLI : 223- 225: reash Rh-L afiee PDHR_ECOLI : 244- 246: esrre Rs-L rrleq PDHR_ECOLI : 247- 249: rersl Rr-L eqrkn PHNF_ECOLI : 49- 52: rfevn RhtL rraid PHNF_ECOLI : 133- 135: nvihl Rt-L rrvng PHNF_ECOLI : 211- 213: pllcv Rt-L nhrdg PTSJ_SALTY : 33- 35: slppv Re-L aselk PTSJ_SALTY : 132- 134: hawaa Rw-L rdatp PTSJ_SALTY : 156- 158: idaie Rl-L cahll PTSJ_SALTY : 206- 208: pekle Ra-L nqgar PTSJ_SALTY : 304- 307: tsakl RlrL nagsq PTSJ_SALTY : 351- 353: qqkla Ra-L qqygi PTSJ_SALTY : 406- 409: pshgl RitL stlnd UXUR_ECOLI : 19- 21: vgami Rd-L iiktp UXUR_ECOLI : 51- 54: trtvv ReaL imlei UXUR_ECOLI : 102- 104: ellqa Rq-L lesni UXUR_ECOLI : 102- 105: ellqa RqlL esnia UXUR_ECOLI : 126- 129: divkm RqaL qleer UXUR_ECOLI : 134- 136: lqlee Re-L assap UXUR_ECOLI : 230- 232: envkq Rl-L efsnv UXUR_HAEIN : 114- 116: ellqa Rq-L lessi UXUR_HAEIN : 114- 117: ellqa RqlL essia UXUR_HAEIN : 197- 199: aqlhs Ri-L qndyh YCBG_BACSU : 15- 18: vdtvn RktL akqvi YCBG_BACSU : 55- 58: ilhvs RpvL reals YCBG_BACSU : 59- 62: srpvl ReaL sslet YCBG_BACSU : 108- 111: aiiea RmaL elglv YFXA_BACSU : 94- 97: rlakk RkqL ytnsa YHCK_ECOLI : 20- 22: spaig Rn-L rsrpl YHCK_ECOLI : 25- 27: rnlrs Rp-L arkkl YHCK_ECOLI : 29- 32: srpla RkkL semve YHCK_ECOLI : 59- 61: qlpse Re-L maffn YHCK_ECOLI : 73- 76: grpsv ReaL aalkr YHCK_ECOLI : 81- 84: laalk RkgL vqinn YHCK_ECOLI : 177- 179: dvdfh Rv-L aeipg YHCK_ECOLI : 239- 241: pdead Ra-L qshln YHFR_ECOLI : 39- 42: lyatv RqrL lddia YHFR_ECOLI : 41- 43: atvrq Rl-L ddiaq YHFR_ECOLI : 255- 258: fcran RitL tidnk YIDP_ECOLI : 11- 14: iaerl RirL nsadf YIDP_ECOLI : 146- 148: pvklf Rn-L slqhl YIDP_ECOLI : 183- 185: pvlad Rl-L arqmk YIDP_ECOLI : 231- 233: veyhl Rr-L hpeks YIDW_ECOLI : 50- 52: irevf Rs-L makrl YIDW_ECOLI : 102- 104: amsev Rn-L vepai YIHL_ECOLI : 17- 19: kekld Rw-L kdgit YIHL_ECOLI : 34- 36: klpse Re-L gellg YIHL_ECOLI : 44- 47: llgik RmtL rqall YIHL_ECOLI : 48- 51: krmtl RqaL lnlea YIN1_STRAM : 49- 52: srtpv ResL illaq YIN1_STRAM : 110- 113: vvgel RdnL vrqgr YIN1_STRAM : 118- 121: lvrqg RkdL dleef YIN1_STRAM : 161- 163: hldra Rr-L glhen YIN1_STRAM : 162- 165: ldrar RlgL henvs YIN1_STRAM : 198- 201: artam RthL ravfd YRDX_RHOSH : 3- 6: mw RphL vdtar YRDX_RHOSH : 55- 57: lttvt Ra-L neaqr YRDX_RHOSH : 62- 65: lneaq RrgL vsaqv YRDX_RHOSH : 63- 65: neaqr Rg-L vsaqv YRDX_RHOSH : 106- 109: aepdl RriL pqgia YRDX_RHOSH : 107- 109: epdlr Ri-L pqgia YRDX_RHOSH : 121- 124: iltsp RgtL amhyq YRDX_RHOSH : 400- 403: adhae RagL aivpa YRDX_RHOSH : 422- 425: paeav RisL giapd YRDX_RHOSH : 431- 434: giapd RgmL eeglt R 18: 7.8401 82( 24) A-x(2,3)-R Occurences: 82(24) EXUR_ECOLI : 206- 209: dqilk Ali-R kdpha FADR_ECOLI : 234- 238: lpgdl AiqgR FADR_HAEIN : 230- 234: stywk AileR lpqnl FARR_ECOLI : 11- 15: lyrqi AdriR eqiar GNTR_BACLI : 24- 28: tgvrv AcelR mriis GNTR_BACSU : 24- 28: tgvrv AyelR mrivs HUTC_KLEAE : 3- 7: mf AqqpR sapap HUTC_PSEPU : 121- 125: lteea AgseR alald HUTC_PSEPU : 128- 132: seral AldmR egqrv KORA_STRLI : 81- 84: tlhrt Aad-R lesal KORA_STRLI : 126- 129: tesgq Avr-R ervth KORA_STRLI : 158- 162: aetvp AllvR driig KORA_STRLI : 175- 179: psaie AatgR ravat KORA_STRLI : 176- 179: saiea Atg-R ravat KORA_STRLI : 176- 180: saiea AtgrR avate KORA_STRLI : 231- 235: vgesv ApagR wrvhr KORA_STRLI : 233- 237: esvap AgrwR vhrd LLDR_ECOLI : 13- 17: lsdev AdrvR alide LLDR_ECOLI : 116- 119: stawh Aam-R atpgd LLDR_ECOLI : 146- 149: diasq Adv-R fhlai LLDR_ECOLI : 211- 215: ifagd AdgaR kamma LLDR_ECOLI : 237- 241: fdedq ArhaR itrlp LLDR_ECOLI : 240- 244: dqarh AritR lpgeh PDHR_ECOLI : 54- 57: pslre Aiq-R leakg PDHR_ECOLI : 115- 118: iaayy Aal-R stded PDHR_ECOLI : 178- 182: mepml AqnvR qnfel PDHR_ECOLI : 220- 223: eeare Ash-R hlafi PHNF_ECOLI : 86- 89: dypln Aqa-R fsqnl PHNF_ECOLI : 178- 181: eqtgi Alr-R sqtri PTSJ_SALTY : 20- 24: rqhii AgtlR aedsl PTSJ_SALTY : 48- 52: rntva AaykR litag PTSJ_SALTY : 49- 52: ntvaa Ayk-R litag PTSJ_SALTY : 108- 112: lsryf ArlsR tphly PTSJ_SALTY : 128- 132: spelh AwaaR wlrda PTSJ_SALTY : 131- 135: lhawa ArwlR datpv PTSJ_SALTY : 153- 156: sgaid Aie-R llcah PTSJ_SALTY : 275- 278: ttqhw Avi-R svskt PTSJ_SALTY : 301- 304: dsats Akl-R lrlna PTSJ_SALTY : 427- 430: adihq Aln-R UXUR_ECOLI : 16- 19: yqevg Ami-R dliik UXUR_HAEIN : 223- 227: iqkkn AneaR kamwq YCBG_BACSU : 202- 206: kkiyd AlaqR dpyka YFXA_BACSU : 86- 89: vsfkd Ack-R lakkr YFXA_BACSU : 91- 94: ackrl Akk-R kqlyt YHCK_ECOLI : 17- 20: edssp Aig-R nlrsr YHCK_ECOLI : 77- 81: vreal AalkR kglvq YHCK_ECOLI : 78- 81: reala Alk-R kglvq YHCK_ECOLI : 93- 97: nnger ArvsR psadt YHCK_ECOLI : 166- 170: sldnn AafiR sdvdf YHCK_ECOLI : 167- 170: ldnna Afi-R sdvdf YHCK_ECOLI : 228- 231: iaivd Air-R hdpde YHFR_ECOLI : 5- 8: mlll Agk-R pynps YHFR_ECOLI : 25- 28: gsims Atd-R yshql YHFR_ECOLI : 36- 39: hqlly Atv-R qrlld YHFR_ECOLI : 212- 215: tidif Aat-R pqakw YIDP_ECOLI : 7- 11: iyksi AerlR irlns YIDP_ECOLI : 36- 39: laeef Avs-R mtirk YIDP_ECOLI : 108- 112: appai AsqlR iqine YIDW_ECOLI : 39- 42: lceef Ats-R niire YIDW_ECOLI : 112- 116: paiav AxaeR atssd YIDW_ECOLI : 145- 148: eafne Adi-R yheav YIHL_ECOLI : 83- 87: spels AsfqR aaieq YIN1_STRAM : 82- 86: arvad AqflR eavel YIN1_STRAM : 176- 179: pavfv Aqh-R eifda YRDX_RHOSH : 23- 26: vdale Adi-R agrvt YRDX_RHOSH : 60- 63: ralne Aqr-R glvsa YRDX_RHOSH : 68- 72: rglvs AqvgR gtfvr YRDX_RHOSH : 134- 138: qestg ApadR taaas YRDX_RHOSH : 152- 156: grvag AsadR ivvts YRDX_RHOSH : 219- 222: peafe Avc-R erapk YRDX_RHOSH : 245- 248: tatlp Adr-R revaa YRDX_RHOSH : 245- 249: tatlp AdrrR evaav YRDX_RHOSH : 252- 256: rrrev AavaR rhgvl YRDX_RHOSH : 253- 256: rreva Ava-R rhgvl YRDX_RHOSH : 253- 257: rreva AvarR hgvll YRDX_RHOSH : 269- 272: eddpy Apl-R serlp YRDX_RHOSH : 312- 316: lapna AaavR latvl YRDX_RHOSH : 313- 316: apnaa Aav-R latvl YRDX_RHOSH : 318- 322: aavrl AtvlR ssvlm YRDX_RHOSH : 334- 338: ppifa AlatR witdg YRDX_RHOSH : 349- 353: tltal AsaiR aenrq YRDX_RHOSH : 354- 357: asair Aen-R qrqss YRDX_RHOSH : 418- 422: vsphp AeavR islgi YRDX_RHOSH : 428- 431: islgi Apd-R gmlee YRDX_RHOSH : 449- 453: lltqp AvgsR avv S 19: 7.8401 109( 24) R-x(0,1)-L Occurences: 109(24) EXUR_ECOLI : 12- 14: eitep RrL yqqla EXUR_ECOLI : 13- 14: itepr R-L yqqla EXUR_ECOLI : 106- 108: ellqa RqL iesni EXUR_ECOLI : 244- 246: efnad RyL faenp FADR_ECOLI : 34- 36: ilpae ReL selig FADR_ECOLI : 53- 54: revlq R-L ardgw FADR_ECOLI : 87- 88: letla R-L dhesv FADR_ECOLI : 149- 151: dytif RgL afasg FADR_ECOLI : 185- 187: anpea RsL algfy FADR_HAEIN : 40- 42: nlpse RdL adkig FADR_HAEIN : 59- 60: revlq R-L ardgw FADR_HAEIN : 167- 168: nkpfy R-L ifnsl FADR_HAEIN : 191- 193: kekkh ReL tkqfy FADR_HAEIN : 234- 235: kaile R-L pqnls FARR_ECOLI : 51- 53: vrqal RqL veqqi FARR_ECOLI : 191- 192: teems R-L lnisq FARR_ECOLI : 191- 193: teems RlL nisqt GNTR_BACLI : 72- 73: sekii R-L ermga GNTR_BACLI : 95- 96: eiydv R-L vmetf GNTR_BACLI : 105- 106: tfvfe R-L granv GNTR_BACLI : 179- 180: lsmra R-L kekye GNTR_BACLI : 189- 191: yedfe RiL dnhel GNTR_BACLI : 206- 208: iktkd RdL mlksl GNTR_BACSU : 72- 73: sekii R-L ermga GNTR_BACSU : 95- 96: eiydv R-L lletf GNTR_BACSU : 95- 97: eiydv RlL letfv GNTR_BACSU : 105- 106: tfvfe R-L vkidi GNTR_BACSU : 179- 180: lsmrv R-L kekye GNTR_BACSU : 189- 191: yedft RiL dnhel GNTR_BACSU : 206- 208: iktkd RaL miqsl HUTC_KLEAE : 55- 57: rmtin RaL reltd HUTC_KLEAE : 58- 60: inral ReL tdegl HUTC_KLEAE : 68- 69: egllv R-L qgvgt HUTC_KLEAE : 225- 226: ivsha R-L lfpgs HUTC_KLEAE : 225- 227: ivsha RlL fpgsr HUTC_KLEAE : 234- 235: pgsry R-L qgrfg HUTC_PSEPU : 62- 64: rmtin RaL relta HUTC_PSEPU : 65- 67: inral ReL tadgl HUTC_PSEPU : 125- 127: aagse RaL aldmr HUTC_PSEPU : 204- 205: epeec R-L lqier HUTC_PSEPU : 204- 206: epeec RlL qierg HUTC_PSEPU : 232- 233: pvtaa R-L ihpgs HUTC_PSEPU : 241- 242: pgsrh R-L egrfs KORA_STRLI : 35- 37: tlpsv RdL aaqye KORA_STRLI : 53- 55: aqkvh RtL kaegl KORA_STRLI : 75- 77: tvstr RtL hrtaa KORA_STRLI : 84- 85: rtaad R-L esals LLDR_ECOLI : 6- 8: mivlp RrL sdeva LLDR_ECOLI : 7- 8: ivlpr R-L sdeva LLDR_ECOLI : 17- 19: vadrv RaL idekn LLDR_ECOLI : 35- 37: klpae RqL amqlg LLDR_ECOLI : 244- 245: harit R-L pgehn PDHR_ECOLI : 38- 40: klppe ReL akqfd PDHR_ECOLI : 57- 58: reaiq R-L eakgl PDHR_ECOLI : 128- 130: dkeri ReL hhaie PDHR_ECOLI : 223- 225: reash RhL afiee PDHR_ECOLI : 244- 246: esrre RsL rrleq PDHR_ECOLI : 247- 249: rersl RrL eqrkn PDHR_ECOLI : 248- 249: erslr R-L eqrkn PHNF_ECOLI : 133- 135: nvihl RtL rrvng PHNF_ECOLI : 198- 199: akecq R-L eipnm PHNF_ECOLI : 211- 213: pllcv RtL nhrdg PTSJ_SALTY : 33- 35: slppv ReL aselk PTSJ_SALTY : 52- 53: aaayk R-L itagl PTSJ_SALTY : 99- 100: npdpq R-L pdlsr PTSJ_SALTY : 109- 110: sryfa R-L srtph PTSJ_SALTY : 132- 134: hawaa RwL rdatp PTSJ_SALTY : 156- 157: idaie R-L lcahl PTSJ_SALTY : 156- 158: idaie RlL cahll PTSJ_SALTY : 206- 208: pekle RaL nqgar PTSJ_SALTY : 289- 290: lgpdl R-L aivas PTSJ_SALTY : 304- 305: tsakl R-L rlnag PTSJ_SALTY : 306- 307: aklrl R-L nagsq PTSJ_SALTY : 334- 335: peyqh R-L tqtrl PTSJ_SALTY : 339- 340: rltqt R-L fyaar PTSJ_SALTY : 351- 353: qqkla RaL qqygi UXUR_ECOLI : 19- 21: vgami RdL iiktp UXUR_ECOLI : 32- 33: ynpge R-L ppere UXUR_ECOLI : 102- 104: ellqa RqL lesni UXUR_ECOLI : 134- 136: lqlee ReL assap UXUR_ECOLI : 230- 231: envkq R-L lefsn UXUR_ECOLI : 230- 232: envkq RlL efsnv UXUR_HAEIN : 114- 116: ellqa RqL lessi UXUR_HAEIN : 197- 199: aqlhs RiL qndyh YCBG_BACSU : 130- 131: eeelq R-L qktid YFXA_BACSU : 89- 90: kdack R-L akkrk YHCK_ECOLI : 20- 22: spaig RnL rsrpl YHCK_ECOLI : 25- 27: rnlrs RpL arkkl YHCK_ECOLI : 59- 61: qlpse ReL maffn YHCK_ECOLI : 128- 129: hfeql R-L ffess YHCK_ECOLI : 177- 179: dvdfh RvL aeipg YHCK_ECOLI : 239- 241: pdead RaL qshln YHFR_ECOLI : 41- 42: atvrq R-L lddia YHFR_ECOLI : 41- 43: atvrq RlL ddiaq YIDP_ECOLI : 9- 10: ksiae R-L rirln YIDP_ECOLI : 13- 14: erlri R-L nsadf YIDP_ECOLI : 146- 148: pvklf RnL slqhl YIDP_ECOLI : 183- 184: pvlad R-L larqm YIDP_ECOLI : 183- 185: pvlad RlL arqmk YIDP_ECOLI : 231- 233: veyhl RrL hpeks YIDP_ECOLI : 232- 233: eyhlr R-L hpeks YIDW_ECOLI : 50- 52: irevf RsL makrl YIDW_ECOLI : 56- 57: slmak R-L iemkr YIDW_ECOLI : 93- 94: ndydp R-L isams YIDW_ECOLI : 102- 104: amsev RnL vepai YIHL_ECOLI : 17- 19: kekld RwL kdgit YIHL_ECOLI : 34- 36: klpse ReL gellg YIN1_STRAM : 139- 140: hqglm R-L sghgn YIN1_STRAM : 161- 163: hldra RrL glhen YIN1_STRAM : 162- 163: ldrar R-L glhen YRDX_RHOSH : 11- 12: lvdta R-L kylgi YRDX_RHOSH : 35- 36: vtpge R-L ppqra YRDX_RHOSH : 55- 57: lttvt RaL neaqr YRDX_RHOSH : 63- 65: neaqr RgL vsaqv YRDX_RHOSH : 107- 109: epdlr RiL pqgia YRDX_RHOSH : 275- 276: plrse R-L palae YRDX_RHOSH : 316- 317: aaaav R-L atvlr T 20: 7.8401 67( 24) L-x(4,5)-D Occurences: 67(24) EXUR_ECOLI : 184- 189: pywkk Lhehi-D srtvd EXUR_ECOLI : 230- 236: ntkim LfnetsD dfefn FADR_ECOLI : 51- 57: tlrev LqrlarD gwlti FADR_HAEIN : 36- 41: pagsn Lpser-D ladki FADR_HAEIN : 57- 63: tlrev LqrlarD gwlti FADR_HAEIN : 139- 145: aeleq LqntaqD ytefd FADR_HAEIN : 206- 211: mqqic Legna-D avvdc FADR_HAEIN : 235- 241: ailer LpqnlsD FARR_ECOLI : 6- 12: mghkp LyrqiaD rireq FARR_ECOLI : 88- 94: sfdek LsdrhvD thsev FARR_ECOLI : 115- 121: flqqq LqitpqD rvwhv FARR_ECOLI : 146- 151: etwmp Lalfp-D ltwqv GNTR_BACLI : 106- 112: fvfer LgranvD elvtd GNTR_BACLI : 180- 186: smrar LkekyeD feril GNTR_BACLI : 213- 218: lmlks Lhqnf-D dvqgk GNTR_BACLI : 213- 219: lmlks LhqnfdD vqgkv GNTR_BACSU : 180- 186: smrvr LkekyeD ftril GNTR_BACSU : 213- 218: lmiqs Lhqnf-D dvqdk GNTR_BACSU : 213- 219: lmiqs LhqnfdD vqdkv HUTC_KLEAE : 57- 62: tinra Lrelt-D egllv HUTC_KLEAE : 109- 115: cevll LeetraD hiqat HUTC_KLEAE : 199- 205: eecal LhihahD pclli HUTC_PSEPU : 64- 70: tinra LreltaD gllvr KORA_STRLI : 31- 36: khgdt Lpsvr-D laaqy KORA_STRLI : 77- 83: strrt LhrtaaD rlesa LLDR_ECOLI : 4- 10: miv LprrlsD evadr LLDR_ECOLI : 8- 14: vlprr LsdevaD rvral LLDR_ECOLI : 87- 93: nivqp LktlmaD dpdys LLDR_ECOLI : 90- 96: qplkt LmaddpD ysfdi LLDR_ECOLI : 136- 141: cfeat Lsedp-D iasqa PDHR_ECOLI : 40- 45: ppere Lakqf-D vsrps PDHR_ECOLI : 78- 84: fvqss LwqsfsD plvel PDHR_ECOLI : 86- 92: sfsdp LvellsD hpesq PDHR_ECOLI : 117- 123: ayyaa LrstdeD kerir PDHR_ECOLI : 136- 142: hhaie LaqqsgD ldaes PHNF_ECOLI : 52- 57: vnrht Lrrai-D qlvek PHNF_ECOLI : 76- 81: vgvlv Lmrpf-D yplna PTSJ_SALTY : 90- 96: tplhd LsggnpD pqrlp PTSJ_SALTY : 290- 296: gpdlr LaivasD satsa PTSJ_SALTY : 409- 414: glrit Lstln-D seint UXUR_ECOLI : 115- 121: aefaa LqatreD ivkmr UXUR_ECOLI : 184- 189: pmwiq Lhshl-D dslyr UXUR_ECOLI : 184- 190: pmwiq LhshldD slyrk UXUR_ECOLI : 232- 238: vkqrl LefsnvD diyfd UXUR_HAEIN : 127- 133: aefaa LqatkkD ilnlk UXUR_HAEIN : 147- 153: nreke LltqnqD dysad UXUR_HAEIN : 148- 153: rekel Ltqnq-D dysad UXUR_HAEIN : 148- 154: rekel LtqnqdD ysadk UXUR_HAEIN : 241- 246: nvkvk Lfels-D vedph UXUR_HAEIN : 244- 249: vklfe Lsdve-D phfdg YCBG_BACSU : 5- 11: myeg LedlkvD tvnrk YCBG_BACSU : 94- 99: pfsvm Lalat-D nlpai YCBG_BACSU : 131- 136: eelqr Lqkti-D dians YCBG_BACSU : 131- 137: eelqr LqktidD ianst YCBG_BACSU : 219- 224: hmyeh Lkfvr-D kilkg YFXA_BACSU : 80- 85: sfvsg Lvsfk-D ackrl YHCK_ECOLI : 3- 8: mg Lmnaf-D sqted YHCK_ECOLI : 107- 113: tiige LsgmakD flshp YHFR_ECOLI : 173- 178: sswip Lsryp-D fdeiy YHFR_ECOLI : 192- 198: sstyq LfqerfD trvvs YIDP_ECOLI : 176- 182: gnyes LtpvlaD rllar YIDW_ECOLI : 86- 91: vlqwv Lendy-D prlis YIHL_ECOLI : 15- 21: nakek LdrwlkD gittp YIN1_STRAM : 97- 102: gslda Lpael-D pavvg YIN1_STRAM : 201- 206: amrth Lravf-D dieri YIN1_STRAM : 201- 207: amrth LravfdD ierir YRDX_RHOSH : 173- 179: falca LllgrgD vvaag YRDX_RHOSH : 174- 179: alcal Llgrg-D vvaag YRDX_RHOSH : 202- 208: qqhle LapvamD eqgil YRDX_RHOSH : 231- 236: pklly Lipsi-D nptta YRDX_RHOSH : 261- 266: rrhgv Llied-D pyapl YRDX_RHOSH : 370- 375: sifsg Ldfaa-D pdghh YRDX_RHOSH : 425- 430: avris Lgiap-D rgmle Number of patterns evaluated by Pratt:238 Total running time: 1 seconds