------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 20 sequences from file HMG_COA_REDUCTASE_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 20 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename HMG_COA_REDUCTASE_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: HMD1_ARATH 592 HMD1_DICDI 552 HMD1_HEVBR 575 HMD1_YEAST 1054 HMD2_ARATH 562 HMD2_DICDI 481 HMD2_HEVBR 210 HMD2_YEAST 1045 HMD3_HEVBR 586 HMDH_CATRO 601 HMDH_CRIGR 887 HMDH_DROME 916 HMDH_HUMAN 888 HMDH_MESAU 887 HMDH_MOUSE 224 HMDH_NICSY 604 HMDH_SCHMA 948 HMDH_STRPU 932 HMDH_XENLA 883 MVAA_PSEMV 428 Pratt run started at Thu Feb 6 19:54:59 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 20.3503 20( 20) E-x(2)-T-x(0,1)-G-G-x(3)-L 2: 20.3503 20( 20) P-x(2)-E-x(2)-T-x-G-x(3,4)-L 3: 19.8503 20( 20) E-x(1,2)-T-x(0,1)-G-G-x(3)-L 4: 19.8503 20( 20) P-x(1,2)-E-x(2)-T-x-G-x(3,4)-L 5: 19.8503 20( 20) A-x(3)-N-x-V-x(1,3)-A-x(3)-A 6: 19.8503 20( 20) G-x(2,3)-G-x(2)-A-x(0,1)-H-x(2)-N 7: 19.8503 20( 20) K-x(4)-N-x(3)-G-x(0,2)-R-x(3)-V 8: 19.3503 22( 20) V-x(4)-L-S-x(0,1)-L-x(0,2)-A 9: 19.3503 30( 20) V-G-x(0,2)-G-G-x(0,1)-T 10: 19.3503 20( 20) E-x(0,2)-T-x(0,1)-G-G-x(3)-L 11: 19.3503 20( 20) E-x(4)-G-x(1,3)-G-T-x(0,1)-L 12: 19.3503 20( 20) G-x(2)-A-x(0,1)-H-x(2)-N-x(2,4)-A 13: 19.3503 21( 20) G-x(1,2)-A-x-A-x(3)-G-x(0,2)-G 14: 19.3503 20( 20) K-x(5)-A-x(1,2)-A-x(3)-G-x(2,4)-N 15: 19.3503 20( 20) N-x(3,4)-G-R-x(3)-V-x(2,4)-E 16: 19.3503 20( 20) N-x(3,5)-G-x(0,1)-R-G-x(2)-V 17: 16.6802 25( 20) A-x(5)-L-x(2)-S-x(5)-R 18: 16.6802 20( 20) G-x-V-G-G 19: 16.6802 20( 20) G-x(2)-G-G-x-T 20: 16.1802 22( 20) V-x(3,4)-E-L-x(4)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 78.4392 20( 20) K-[NT]-x(2)-[AG]-x-A-x(1,2)-A-[GV]-[ACS]-[ILPV]-G-x(2,4)-N-[AL]-x-[AS]-x-[NR]-x-[ILV]-[AST]-[AGT]-x(2)-[AIL]-[AQ]-x-G-x(3)-[AL]-x-[ANV]-x-[ADEGNT]-x-[AS]-x-[CV]-x-[GT] B 2: 63.9610 21( 20) G-x(1,2)-A-x-A-[CG]-x(2)-G-x(0,2)-G-x(2)-[AT]-x(2)-[AEGS]-x(3)-[ANST]-[AG]-x(2)-[AILV]-[AG]-x-[GL]-[EQ]-x(3)-[PQ]-[NV]-[GIV]-x-[SV]-[GS]-x-[AC] C 3: 56.3110 20( 20) G-x(2,3)-G-x(2)-A-x(0,1)-H-[AS]-x-N-[ILM]-[AIV]-[ASTV]-[AGV]-x(2)-[AIL]-x(2)-[DG]-[EQ]-[DV]-x(3)-[ANV]-x-[ADEGQT]-x-[SV]-x(3)-[DT] D 4: 48.0090 20( 20) G-x(2)-A-x(0,1)-H-[AS]-x-N-x(2,4)-A-[GILV]-x(2)-[AG]-x-[EGT]-x-[DQ]-x-[ALV]-[AQ]-[NQR]-x(2)-[DSV]-[ES] E 5: 44.8985 20( 20) P-x(2)-E-[AILV]-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] F 6: 44.3985 20( 20) P-x(1,2)-E-[AILV]-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] G 7: 43.1532 20( 20) E-x(2)-T-x(0,1)-G-G-[GQ]-[TV]-x-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] H 8: 42.6593 20( 20) P-x(2)-E-x-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] I 9: 42.6532 20( 20) E-x(1,2)-T-x(0,1)-G-G-[GQ]-[TV]-x-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] J 10: 42.1593 20( 20) P-x(1,2)-E-x-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] K 11: 42.1532 20( 20) E-x(0,2)-T-x(0,1)-G-G-[GQ]-[TV]-x-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] L 12: 41.8795 20( 20) E-x-[DG]-[NT]-x-G-x(1,3)-G-T-x(0,1)-L-x(2)-[PQ]-x-[AP]-x-[GL]-x-[ILMV]-x(2)-[AILV]-x(2)-[ADPST] M 13: 39.3630 20( 20) P-x(2)-E-x(2)-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] N 14: 38.8630 20( 20) P-x(1,2)-E-x(2)-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] O 15: 35.5760 20( 20) G-x-[IV]-G-G-[AG]-T-x(3)-[AGPS]-x(2)-[AQ]-x(4)-[ILM]-x-[GILV]-x(2)-[ADPST] P 16: 34.4138 20( 20) K-x-[AQS]-x-[ILV]-N-x(3)-G-x(0,2)-R-[DG]-x(2)-V-x-[ACT]-x-[AC] Q 17: 31.8511 30( 20) V-G-x(0,2)-G-G-x(0,1)-T-x(3)-[AGPS]-x(2)-[AQ]-x(4)-[ILM]-x-[GILV]-x(2)-[ADPST] R 18: 31.7408 20( 20) V-x(3,4)-E-L-[GPS]-x(2)-[ASV]-A-x-[ADNSV]-x-[DGQS]-x(4)-[ADS]-x-[LM] S 19: 25.3251 25( 20) A-x(3)-[DGS]-x-L-[LMV]-x-S-x(4)-[CN]-R T 20: 25.3197 20( 20) N-x(3,5)-G-x(0,1)-R-G-[DKR]-x-V-x(3)-[AC] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 78.4392 20( 20) K-[NT]-x(2)-[AG]-x-A-x(1,2)-A-[GV]-[ACS]-[ILPV]-G-x(2,4)-N-[AL]-x-[AS]-x-[NR]-x-[ILV]-[AST]-[AGT]-x(2)-[AIL]-[AQ]-x-G-x(3)-[AL]-x-[ANV]-x-[ADEGNT]-x-[AS]-x-[CV]-x-[GT] Occurences: 20(20) HMD1_ARATH : 441- 485: elnml KNlaGsAv-AGSLGgf--NAhAsNiVSAvfIAtGqdpAqNvEsSqCiT mmeai HMD1_DICDI : 413- 457: dlnia KNliGsAm-AGSIGgf--NAhAsNiVTAifLAtGqdcAqNvEsSnCiT qmeac HMD1_HEVBR : 430- 474: elnml KNlaGsAv-AGALGgf--NAhAgNiVSAifIAtGqdpAqNvEsShCiT mmeav HMD1_YEAST : 892- 936: elnia KNlvGsAm-AGSVGgf--NAhAaNlVTAvfLAlGqdpAqNvEsSnCiT lmkev HMD2_ARATH : 416- 460: elntl KNlvGsAm-AGSLGgf--NAhSsNiVSAvfIAtGqdpAqNvEsShCmT milpd HMD2_DICDI : 324- 368: slnid KNliGsAm-AGSIGgf--NAhAsNiVTAlyIAtGqdpAqNvEsSnCiT lmesi HMD2_HEVBR : 65- 109: elnml KNlaGsAv-AGALGgf--NAhAgNiVSAifIAtGqdpAqNvEsShCiT mmeav HMD2_YEAST : 888- 932: elnis KNlvGsAm-AGSVGgf--NAhAaNlVTAlfLAlGqdpAqNvEsSnCiT lmkev HMD3_HEVBR : 441- 485: elnmi KNltGsAv-AGSLGgf--NAhAsNmVTAvyIAtGqdpAqNvEsShCiT mmeav HMDH_CATRO : 449- 493: elnmv KNlaGsAi-AGALGgf--NAhAsNiVSAifIAtGqdpAqNvEsSqCiT mmeav HMDH_CRIGR : 734- 778: dvnin KNlvGsAm-AGSIGgy--NAhAaNiVTAiyIAcGqdaAqNvGsSnCiT lmeas HMDH_DROME : 757- 801: ecnkl KNmgGsAm-AGSIGgn--NAhAaNmVTAvfLAtGqdpAqNvTsSnCsT amecw HMDH_HUMAN : 735- 779: evnin KNlvGsAm-AGSIGgy--NAhAaNiVTAiyIAcGqdaAqNvGsSnCiT lmeas HMDH_MESAU : 734- 778: dvnin KNlvGsAm-AGSIGgy--NAhAaNiVTAiyIAcGqdaAqNvGsSnCiT lmeas HMDH_MOUSE : 71- 115: dvnin KNlvGsAm-AGSIGgy--NAhAaNiVTAiyIAcGqdaAqNvGsSnCiT lmeas HMDH_NICSY : 459- 503: elnml KNltGsAm-AGALGgf--NAhAsNiVSAvyIAtGqdpAqNiEsShCiT mmeav HMDH_SCHMA : 743- 789: rlths KNwiGsAm-AGCPGmmgcNAhAaNiIAGmfAAtGqdlAqVvDsSsClT qlevd HMDH_STRPU : 751- 795: dlnih KNlvGsAm-AGSIGgf--NAhAaNiVTAiyIAtGqdaAqNiAsSnCmT lmetr HMDH_XENLA : 730- 774: evnin KNfiGsAm-AGSIGgy--NAhAaNiVTAiyIAcGqdaAqNvGsSnCiT imeat MVAA_PSEMV : 348- 394: rilgv KTaqAlAeiAVAVGlaq-NLgAmRaLATegIQrGhmaLhArNiAvVaG argde B 2: 63.9610 21( 20) G-x(1,2)-A-x-A-[CG]-x(2)-G-x(0,2)-G-x(2)-[AT]-x(2)-[AEGS]-x(3)-[ANST]-[AG]-x(2)-[AILV]-[AG]-x-[GL]-[EQ]-x(3)-[PQ]-[NV]-[GIV]-x-[SV]-[GS]-x-[AC] Occurences: 21(20) HMD1_ARATH : 445- 483: lknla Gs-AvAGslG--GfnAhaSnivSAvfIAtGQdpaQNVeSSqC itmme HMD1_DICDI : 417- 455: aknli Gs-AmAGsiG--GfnAhaSnivTAifLAtGQdcaQNVeSSnC itqme HMD1_HEVBR : 434- 472: lknla Gs-AvAGalG--GfnAhaGnivSAifIAtGQdpaQNVeSShC itmme HMD1_YEAST : 896- 934: aknlv Gs-AmAGsvG--GfnAhaAnlvTAvfLAlGQdpaQNVeSSnC itlmk HMD2_ARATH : 420- 458: lknlv Gs-AmAGslG--GfnAhsSnivSAvfIAtGQdpaQNVeSShC mtmil HMD2_DICDI : 328- 366: dknli Gs-AmAGsiG--GfnAhaSnivTAlyIAtGQdpaQNVeSSnC itlme HMD2_HEVBR : 69- 107: lknla Gs-AvAGalG--GfnAhaGnivSAifIAtGQdpaQNVeSShC itmme HMD2_YEAST : 892- 930: sknlv Gs-AmAGsvG--GfnAhaAnlvTAlfLAlGQdpaQNVeSSnC itlmk HMD3_HEVBR : 445- 483: iknlt Gs-AvAGslG--GfnAhaSnmvTAvyIAtGQdpaQNVeSShC itmme HMDH_CATRO : 453- 491: vknla Gs-AiAGalG--GfnAhaSnivSAifIAtGQdpaQNVeSSqC itmme HMDH_CRIGR : 738- 776: nknlv Gs-AmAGsiG--GynAhaAnivTAiyIAcGQdaaQNVgSSnC itlme HMDH_DROME : 760- 799: klknm GgsAmAGsiG--GnnAhaAnmvTAvfLAtGQdpaQNVtSSnC stame HMDH_DROME : 761- 799: lknmg Gs-AmAGsiG--GnnAhaAnmvTAvfLAtGQdpaQNVtSSnC stame HMDH_HUMAN : 739- 777: nknlv Gs-AmAGsiG--GynAhaAnivTAiyIAcGQdaaQNVgSSnC itlme HMDH_MESAU : 738- 776: nknlv Gs-AmAGsiG--GynAhaAnivTAiyIAcGQdaaQNVgSSnC itlme HMDH_MOUSE : 75- 113: nknlv Gs-AmAGsiG--GynAhaAnivTAiyIAcGQdaaQNVgSSnC itlme HMDH_NICSY : 463- 501: lknlt Gs-AmAGalG--GfnAhaSnivSAvyIAtGQdpaQNIeSShC itmme HMDH_SCHMA : 747- 787: sknwi Gs-AmAGcpGmmGcnAhaAniiAGmfAAtGQdlaQVVdSSsC ltqle HMDH_STRPU : 755- 793: hknlv Gs-AmAGsiG--GfnAhaAnivTAiyIAtGQdaaQNIaSSnC mtlme HMDH_XENLA : 734- 772: nknfi Gs-AmAGsiG--GynAhaAnivTAiyIAcGQdaaQNVgSSnC itime MVAA_PSEMV : 290- 331: ravea GahAyACrsGhyGslTtwEkdnNGhlVGtLEmpmPVGlVGgA tkthp C 3: 56.3110 20( 20) G-x(2,3)-G-x(2)-A-x(0,1)-H-[AS]-x-N-[ILM]-[AIV]-[ASTV]-[AGV]-x(2)-[AIL]-x(2)-[DG]-[EQ]-[DV]-x(3)-[ANV]-x-[ADEGQT]-x-[SV]-x(3)-[DT] Occurences: 20(20) HMD1_ARATH : 450- 485: gsava GslgGfnA-HAsNIVSAvfIatGQDpaqNvEsSqciT mmeai HMD1_DICDI : 422- 457: gsama GsigGfnA-HAsNIVTAifLatGQDcaqNvEsSnciT qmeac HMD1_HEVBR : 439- 474: gsava GalgGfnA-HAgNIVSAifIatGQDpaqNvEsShciT mmeav HMD1_YEAST : 901- 936: gsama GsvgGfnA-HAaNLVTAvfLalGQDpaqNvEsSnciT lmkev HMD2_ARATH : 425- 460: gsama GslgGfnA-HSsNIVSAvfIatGQDpaqNvEsShcmT milpd HMD2_DICDI : 333- 368: gsama GsigGfnA-HAsNIVTAlyIatGQDpaqNvEsSnciT lmesi HMD2_HEVBR : 74- 109: gsava GalgGfnA-HAgNIVSAifIatGQDpaqNvEsShciT mmeav HMD2_YEAST : 897- 932: gsama GsvgGfnA-HAaNLVTAlfLalGQDpaqNvEsSnciT lmkev HMD3_HEVBR : 450- 485: gsava GslgGfnA-HAsNMVTAvyIatGQDpaqNvEsShciT mmeav HMDH_CATRO : 458- 493: gsaia GalgGfnA-HAsNIVSAifIatGQDpaqNvEsSqciT mmeav HMDH_CRIGR : 743- 778: gsama GsigGynA-HAaNIVTAiyIacGQDaaqNvGsSnciT lmeas HMDH_DROME : 766- 801: gsama GsigGnnA-HAaNMVTAvfLatGQDpaqNvTsSncsT amecw HMDH_HUMAN : 744- 779: gsama GsigGynA-HAaNIVTAiyIacGQDaaqNvGsSnciT lmeas HMDH_MESAU : 743- 778: gsama GsigGynA-HAaNIVTAiyIacGQDaaqNvGsSnciT lmeas HMDH_MOUSE : 80- 115: gsama GsigGynA-HAaNIVTAiyIacGQDaaqNvGsSnciT lmeas HMDH_NICSY : 468- 503: gsama GalgGfnA-HAsNIVSAvyIatGQDpaqNiEsShciT mmeav HMDH_SCHMA : 755- 789: magcp Gmm-GcnA-HAaNIIAGmfAatGQDlaqVvDsSsclT qlevd HMDH_STRPU : 760- 795: gsama GsigGfnA-HAaNIVTAiyIatGQDaaqNiAsSncmT lmetr HMDH_XENLA : 739- 774: gsama GsigGynA-HAaNIVTAiyIacGQDaaqNvGsSnciT imeat MVAA_PSEMV : 376- 412: alate GiqrGhmAlHArNIAVVagArgDEVdwvArQlVeyhD vradr D 4: 48.0090 20( 20) G-x(2)-A-x(0,1)-H-[AS]-x-N-x(2,4)-A-[GILV]-x(2)-[AG]-x-[EGT]-x-[DQ]-x-[ALV]-[AQ]-[NQR]-x(2)-[DSV]-[ES] Occurences: 20(20) HMD1_ARATH : 454- 481: agslg GfnA-HAsNivs-AVfiAtGqDpAQNveSS qcitm HMD1_DICDI : 426- 453: agsig GfnA-HAsNivt-AIflAtGqDcAQNveSS ncitq HMD1_HEVBR : 443- 470: agalg GfnA-HAgNivs-AIfiAtGqDpAQNveSS hcitm HMD1_YEAST : 905- 932: agsvg GfnA-HAaNlvt-AVflAlGqDpAQNveSS ncitl HMD2_ARATH : 429- 456: agslg GfnA-HSsNivs-AVfiAtGqDpAQNveSS hcmtm HMD2_DICDI : 337- 364: agsig GfnA-HAsNivt-ALyiAtGqDpAQNveSS ncitl HMD2_HEVBR : 78- 105: agalg GfnA-HAgNivs-AIfiAtGqDpAQNveSS hcitm HMD2_YEAST : 901- 928: agsvg GfnA-HAaNlvt-ALflAlGqDpAQNveSS ncitl HMD3_HEVBR : 454- 481: agslg GfnA-HAsNmvt-AVyiAtGqDpAQNveSS hcitm HMDH_CATRO : 462- 489: agalg GfnA-HAsNivs-AIfiAtGqDpAQNveSS qcitm HMDH_CRIGR : 747- 774: agsig GynA-HAaNivt-AIyiAcGqDaAQNvgSS ncitl HMDH_DROME : 770- 797: agsig GnnA-HAaNmvt-AVflAtGqDpAQNvtSS ncsta HMDH_HUMAN : 748- 775: agsig GynA-HAaNivt-AIyiAcGqDaAQNvgSS ncitl HMDH_MESAU : 747- 774: agsig GynA-HAaNivt-AIyiAcGqDaAQNvgSS ncitl HMDH_MOUSE : 84- 111: agsig GynA-HAaNivt-AIyiAcGqDaAQNvgSS ncitl HMDH_NICSY : 472- 499: agalg GfnA-HAsNivs-AVyiAtGqDpAQNieSS hcitm HMDH_SCHMA : 758- 784: cpgmm GcnA-HAaNii--AGmfAaTgQdLAQvvDS ssclt HMDH_STRPU : 764- 791: agsig GfnA-HAaNivt-AIyiAtGqDaAQNiaSS ncmtl HMDH_XENLA : 743- 770: agsig GynA-HAaNivt-AIyiAcGqDaAQNvgSS nciti MVAA_PSEMV : 380- 409: egiqr GhmAlHArNiavvAGarGdEvDwVARqlVE yhdvr E 5: 44.8985 20( 20) P-x(2)-E-[AILV]-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 503- 530: isvtm PsiEVGTVGggtqLasqsAcLNLlgVkG astes HMD1_DICDI : 475- 502: itvtm PsiEVGTVGggtsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 492- 519: isvtm PsiEVGTVGggtqLasqsAcLNLlgVkG ankes HMD1_YEAST : 952- 979: isvsm PsiEVGTIGggtvLepqgAmLDLlgVrG phata HMD2_ARATH : 476- 503: isvsm PciEVGTVGggtqLasqaAcLNLlgVkG snnek HMD2_DICDI : 386- 413: isvtm PsiEVGTVGggthLpaqsAcLDLlkIrG anler HMD2_HEVBR : 127- 154: isvtl PsiEVGTVGggtqLasqsAcLNLlgVmG ackes HMD2_YEAST : 948- 975: isvsm PsiEVGTIGggtvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 503- 530: isvsm PsiELGTVGggtqLasqsAcLNLlgVkG askds HMDH_CATRO : 511- 538: isvtm PsiEVGTVGggtqLasqsAcLNLlgVkG askds HMDH_CRIGR : 797- 824: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 820- 847: mtctm PslEVGTVGggtgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 798- 825: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 797- 824: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 134- 161: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 521- 548: vsvtm PsiEVGTVGggtqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 807- 834: asvtm PclEVGTVGggtrLsgqrAcLDLldLsV drpte HMDH_STRPU : 814- 841: lsctm PsiELGTVGggtvLppqsAcLQMmdVkG snihg HMDH_XENLA : 793- 820: isctm PsiEIGTVGggtnLapqqAcLQMlgVqG astet MVAA_PSEMV : 199- 225: aeava PlmEAITGGqvr-LrilsNlADLrlArA qvrit F 6: 44.3985 20( 20) P-x(1,2)-E-[AILV]-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 503- 530: isvtm PsiEVGTVGggtqLasqsAcLNLlgVkG astes HMD1_DICDI : 475- 502: itvtm PsiEVGTVGggtsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 492- 519: isvtm PsiEVGTVGggtqLasqsAcLNLlgVkG ankes HMD1_YEAST : 952- 979: isvsm PsiEVGTIGggtvLepqgAmLDLlgVrG phata HMD2_ARATH : 476- 503: isvsm PciEVGTVGggtqLasqaAcLNLlgVkG snnek HMD2_DICDI : 386- 413: isvtm PsiEVGTVGggthLpaqsAcLDLlkIrG anler HMD2_HEVBR : 127- 154: isvtl PsiEVGTVGggtqLasqsAcLNLlgVmG ackes HMD2_YEAST : 948- 975: isvsm PsiEVGTIGggtvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 503- 530: isvsm PsiELGTVGggtqLasqsAcLNLlgVkG askds HMDH_CATRO : 511- 538: isvtm PsiEVGTVGggtqLasqsAcLNLlgVkG askds HMDH_CRIGR : 797- 824: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 820- 847: mtctm PslEVGTVGggtgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 798- 825: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 797- 824: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 134- 161: isctm PsiEIGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 521- 548: vsvtm PsiEVGTVGggtqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 807- 834: asvtm PclEVGTVGggtrLsgqrAcLDLldLsV drpte HMDH_STRPU : 814- 841: lsctm PsiELGTVGggtvLppqsAcLQMmdVkG snihg HMDH_XENLA : 793- 820: isctm PsiEIGTVGggtnLapqqAcLQMlgVqG astet MVAA_PSEMV : 199- 225: aeava PlmEAITGGqvr-LrilsNlADLrlArA qvrit G 7: 43.1532 20( 20) E-x(2)-T-x(0,1)-G-G-[GQ]-[TV]-x-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 506- 530: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG astes HMD1_DICDI : 478- 502: tmpsi EvgTvGGGTsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 495- 519: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG ankes HMD1_YEAST : 955- 979: smpsi EvgTiGGGTvLepqgAmLDLlgVrG phata HMD2_ARATH : 479- 503: smpci EvgTvGGGTqLasqaAcLNLlgVkG snnek HMD2_DICDI : 389- 413: tmpsi EvgTvGGGThLpaqsAcLDLlkIrG anler HMD2_HEVBR : 130- 154: tlpsi EvgTvGGGTqLasqsAcLNLlgVmG ackes HMD2_YEAST : 951- 975: smpsi EvgTiGGGTvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 506- 530: smpsi ElgTvGGGTqLasqsAcLNLlgVkG askds HMDH_CATRO : 514- 538: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG askds HMDH_CRIGR : 800- 824: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 823- 847: tmpsl EvgTvGGGTgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 801- 825: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 800- 824: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 137- 161: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 524- 548: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 810- 834: tmpcl EvgTvGGGTrLsgqrAcLDLldLsV drpte HMDH_STRPU : 817- 841: tmpsi ElgTvGGGTvLppqsAcLQMmdVkG snihg HMDH_XENLA : 796- 820: tmpsi EigTvGGGTnLapqqAcLQMlgVqG astet MVAA_PSEMV : 202- 225: vaplm EaiT-GGQVrLrilsNlADLrlArA qvrit H 8: 42.6593 20( 20) P-x(2)-E-x-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 503- 530: isvtm PsiEvGTVGggtqLasqsAcLNLlgVkG astes HMD1_DICDI : 475- 502: itvtm PsiEvGTVGggtsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 492- 519: isvtm PsiEvGTVGggtqLasqsAcLNLlgVkG ankes HMD1_YEAST : 952- 979: isvsm PsiEvGTIGggtvLepqgAmLDLlgVrG phata HMD2_ARATH : 476- 503: isvsm PciEvGTVGggtqLasqaAcLNLlgVkG snnek HMD2_DICDI : 386- 413: isvtm PsiEvGTVGggthLpaqsAcLDLlkIrG anler HMD2_HEVBR : 127- 154: isvtl PsiEvGTVGggtqLasqsAcLNLlgVmG ackes HMD2_YEAST : 948- 975: isvsm PsiEvGTIGggtvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 503- 530: isvsm PsiElGTVGggtqLasqsAcLNLlgVkG askds HMDH_CATRO : 511- 538: isvtm PsiEvGTVGggtqLasqsAcLNLlgVkG askds HMDH_CRIGR : 797- 824: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 820- 847: mtctm PslEvGTVGggtgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 798- 825: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 797- 824: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 134- 161: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 521- 548: vsvtm PsiEvGTVGggtqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 807- 834: asvtm PclEvGTVGggtrLsgqrAcLDLldLsV drpte HMDH_STRPU : 814- 841: lsctm PsiElGTVGggtvLppqsAcLQMmdVkG snihg HMDH_XENLA : 793- 820: isctm PsiEiGTVGggtnLapqqAcLQMlgVqG astet MVAA_PSEMV : 199- 225: aeava PlmEaITGGqvr-LrilsNlADLrlArA qvrit I 9: 42.6532 20( 20) E-x(1,2)-T-x(0,1)-G-G-[GQ]-[TV]-x-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 506- 530: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG astes HMD1_DICDI : 478- 502: tmpsi EvgTvGGGTsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 495- 519: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG ankes HMD1_YEAST : 955- 979: smpsi EvgTiGGGTvLepqgAmLDLlgVrG phata HMD2_ARATH : 479- 503: smpci EvgTvGGGTqLasqaAcLNLlgVkG snnek HMD2_DICDI : 389- 413: tmpsi EvgTvGGGThLpaqsAcLDLlkIrG anler HMD2_HEVBR : 130- 154: tlpsi EvgTvGGGTqLasqsAcLNLlgVmG ackes HMD2_YEAST : 951- 975: smpsi EvgTiGGGTvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 506- 530: smpsi ElgTvGGGTqLasqsAcLNLlgVkG askds HMDH_CATRO : 514- 538: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG askds HMDH_CRIGR : 800- 824: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 823- 847: tmpsl EvgTvGGGTgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 801- 825: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 800- 824: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 137- 161: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 524- 548: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 810- 834: tmpcl EvgTvGGGTrLsgqrAcLDLldLsV drpte HMDH_STRPU : 817- 841: tmpsi ElgTvGGGTvLppqsAcLQMmdVkG snihg HMDH_XENLA : 796- 820: tmpsi EigTvGGGTnLapqqAcLQMlgVqG astet MVAA_PSEMV : 202- 225: vaplm EaiT-GGQVrLrilsNlADLrlArA qvrit J 10: 42.1593 20( 20) P-x(1,2)-E-x-[GI]-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 503- 530: isvtm PsiEvGTVGggtqLasqsAcLNLlgVkG astes HMD1_DICDI : 475- 502: itvtm PsiEvGTVGggtsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 492- 519: isvtm PsiEvGTVGggtqLasqsAcLNLlgVkG ankes HMD1_YEAST : 952- 979: isvsm PsiEvGTIGggtvLepqgAmLDLlgVrG phata HMD2_ARATH : 476- 503: isvsm PciEvGTVGggtqLasqaAcLNLlgVkG snnek HMD2_DICDI : 386- 413: isvtm PsiEvGTVGggthLpaqsAcLDLlkIrG anler HMD2_HEVBR : 127- 154: isvtl PsiEvGTVGggtqLasqsAcLNLlgVmG ackes HMD2_YEAST : 948- 975: isvsm PsiEvGTIGggtvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 503- 530: isvsm PsiElGTVGggtqLasqsAcLNLlgVkG askds HMDH_CATRO : 511- 538: isvtm PsiEvGTVGggtqLasqsAcLNLlgVkG askds HMDH_CRIGR : 797- 824: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 820- 847: mtctm PslEvGTVGggtgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 798- 825: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 797- 824: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 134- 161: isctm PsiEiGTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 521- 548: vsvtm PsiEvGTVGggtqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 807- 834: asvtm PclEvGTVGggtrLsgqrAcLDLldLsV drpte HMDH_STRPU : 814- 841: lsctm PsiElGTVGggtvLppqsAcLQMmdVkG snihg HMDH_XENLA : 793- 820: isctm PsiEiGTVGggtnLapqqAcLQMlgVqG astet MVAA_PSEMV : 199- 225: aeava PlmEaITGGqvr-LrilsNlADLrlArA qvrit K 11: 42.1532 20( 20) E-x(0,2)-T-x(0,1)-G-G-[GQ]-[TV]-x-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 506- 530: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG astes HMD1_DICDI : 478- 502: tmpsi EvgTvGGGTsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 495- 519: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG ankes HMD1_YEAST : 955- 979: smpsi EvgTiGGGTvLepqgAmLDLlgVrG phata HMD2_ARATH : 479- 503: smpci EvgTvGGGTqLasqaAcLNLlgVkG snnek HMD2_DICDI : 389- 413: tmpsi EvgTvGGGThLpaqsAcLDLlkIrG anler HMD2_HEVBR : 130- 154: tlpsi EvgTvGGGTqLasqsAcLNLlgVmG ackes HMD2_YEAST : 951- 975: smpsi EvgTiGGGTvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 506- 530: smpsi ElgTvGGGTqLasqsAcLNLlgVkG askds HMDH_CATRO : 514- 538: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG askds HMDH_CRIGR : 800- 824: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 823- 847: tmpsl EvgTvGGGTgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 801- 825: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 800- 824: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 137- 161: tmpsi EigTvGGGTnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 524- 548: tmpsi EvgTvGGGTqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 810- 834: tmpcl EvgTvGGGTrLsgqrAcLDLldLsV drpte HMDH_STRPU : 817- 841: tmpsi ElgTvGGGTvLppqsAcLQMmdVkG snihg HMDH_XENLA : 796- 820: tmpsi EigTvGGGTnLapqqAcLQMlgVqG astet MVAA_PSEMV : 202- 225: vaplm EaiT-GGQVrLrilsNlADLrlArA qvrit L 12: 41.8795 20( 20) E-x-[DG]-[NT]-x-G-x(1,3)-G-T-x(0,1)-L-x(2)-[PQ]-x-[AP]-x-[GL]-x-[ILMV]-x(2)-[AILV]-x(2)-[ADPST] Occurences: 20(20) HMD1_ARATH : 506- 531: tmpsi EvGTvGg--GTqLasQsAcLnLlgVkgA stesp HMD1_DICDI : 478- 503: tmpsi EvGTvGg--GTsLpaQsAcLdIigVkgS ssskp HMD1_HEVBR : 495- 520: tmpsi EvGTvGg--GTqLasQsAcLnLlgVkgA nkesp HMD1_YEAST : 955- 980: smpsi EvGTiGg--GTvLepQgAmLdLlgVrgP hatap HMD2_ARATH : 479- 504: smpci EvGTvGg--GTqLasQaAcLnLlgVkgS nnekp HMD2_DICDI : 389- 414: tmpsi EvGTvGg--GThLpaQsAcLdLlkIrgA nlerp HMD2_HEVBR : 130- 155: tlpsi EvGTvGg--GTqLasQsAcLnLlgVmgA ckesp HMD2_YEAST : 951- 976: smpsi EvGTiGg--GTvLepQgAmLdLlgVrgP hptep HMD3_HEVBR : 506- 531: smpsi ElGTvGg--GTqLasQsAcLnLlgVkgA skdsp HMDH_CATRO : 514- 539: tmpsi EvGTvGg--GTqLasQsAcLnLlgVkgA skdsp HMDH_CRIGR : 800- 825: tmpsi EiGTvGg--GTnLlpQqAcLqMlgVqgA ckdnp HMDH_DROME : 823- 848: tmpsl EvGTvGg--GTgLpgQsAcLeMlgVrgA hatrp HMDH_HUMAN : 801- 826: tmpsi EiGTvGg--GTnLlpQqAcLqMlgVqgA ckdnp HMDH_MESAU : 800- 825: tmpsi EiGTvGg--GTnLlpQqAcLqMlgVqgA ckdnp HMDH_MOUSE : 137- 162: tmpsi EiGTvGg--GTnLlpQqAcLqMlgVqgA ckdnp HMDH_NICSY : 524- 549: tmpsi EvGTvGg--GTqLasQsAcLnLlgVkgA nrevp HMDH_SCHMA : 810- 835: tmpcl EvGTvGg--GTrLsgQrAcLdLldLsvD rpteh HMDH_STRPU : 817- 842: tmpsi ElGTvGg--GTvLppQsAcLqMmdVkgS nihgs HMDH_XENLA : 796- 821: tmpsi EiGTvGg--GTnLapQqAcLqMlgVqgA stetp MVAA_PSEMV : 308- 334: slttw EkDNnGhlvGT-LemPmPvGlVggAtkT hplaq M 13: 39.3630 20( 20) P-x(2)-E-x(2)-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 503- 530: isvtm PsiEvgTVGggtqLasqsAcLNLlgVkG astes HMD1_DICDI : 475- 502: itvtm PsiEvgTVGggtsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 492- 519: isvtm PsiEvgTVGggtqLasqsAcLNLlgVkG ankes HMD1_YEAST : 952- 979: isvsm PsiEvgTIGggtvLepqgAmLDLlgVrG phata HMD2_ARATH : 476- 503: isvsm PciEvgTVGggtqLasqaAcLNLlgVkG snnek HMD2_DICDI : 386- 413: isvtm PsiEvgTVGggthLpaqsAcLDLlkIrG anler HMD2_HEVBR : 127- 154: isvtl PsiEvgTVGggtqLasqsAcLNLlgVmG ackes HMD2_YEAST : 948- 975: isvsm PsiEvgTIGggtvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 503- 530: isvsm PsiElgTVGggtqLasqsAcLNLlgVkG askds HMDH_CATRO : 511- 538: isvtm PsiEvgTVGggtqLasqsAcLNLlgVkG askds HMDH_CRIGR : 797- 824: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 820- 847: mtctm PslEvgTVGggtgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 798- 825: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 797- 824: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 134- 161: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 521- 548: vsvtm PsiEvgTVGggtqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 807- 834: asvtm PclEvgTVGggtrLsgqrAcLDLldLsV drpte HMDH_STRPU : 814- 841: lsctm PsiElgTVGggtvLppqsAcLQMmdVkG snihg HMDH_XENLA : 793- 820: isctm PsiEigTVGggtnLapqqAcLQMlgVqG astet MVAA_PSEMV : 199- 225: aeava PlmEaiTGGqvr-LrilsNlADLrlArA qvrit N 14: 38.8630 20( 20) P-x(1,2)-E-x(2)-T-[GIV]-G-x(3,4)-L-x(4)-[AN]-x-[AL]-[DENQ]-[ILM]-x(2)-[AILV]-x-[AGV] Occurences: 20(20) HMD1_ARATH : 503- 530: isvtm PsiEvgTVGggtqLasqsAcLNLlgVkG astes HMD1_DICDI : 475- 502: itvtm PsiEvgTVGggtsLpaqsAcLDIigVkG ssssk HMD1_HEVBR : 492- 519: isvtm PsiEvgTVGggtqLasqsAcLNLlgVkG ankes HMD1_YEAST : 952- 979: isvsm PsiEvgTIGggtvLepqgAmLDLlgVrG phata HMD2_ARATH : 476- 503: isvsm PciEvgTVGggtqLasqaAcLNLlgVkG snnek HMD2_DICDI : 386- 413: isvtm PsiEvgTVGggthLpaqsAcLDLlkIrG anler HMD2_HEVBR : 127- 154: isvtl PsiEvgTVGggtqLasqsAcLNLlgVmG ackes HMD2_YEAST : 948- 975: isvsm PsiEvgTIGggtvLepqgAmLDLlgVrG phpte HMD3_HEVBR : 503- 530: isvsm PsiElgTVGggtqLasqsAcLNLlgVkG askds HMDH_CATRO : 511- 538: isvtm PsiEvgTVGggtqLasqsAcLNLlgVkG askds HMDH_CRIGR : 797- 824: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_DROME : 820- 847: mtctm PslEvgTVGggtgLpgqsAcLEMlgVrG ahatr HMDH_HUMAN : 798- 825: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MESAU : 797- 824: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_MOUSE : 134- 161: isctm PsiEigTVGggtnLlpqqAcLQMlgVqG ackdn HMDH_NICSY : 521- 548: vsvtm PsiEvgTVGggtqLasqsAcLNLlgVkG anrev HMDH_SCHMA : 807- 834: asvtm PclEvgTVGggtrLsgqrAcLDLldLsV drpte HMDH_STRPU : 814- 841: lsctm PsiElgTVGggtvLppqsAcLQMmdVkG snihg HMDH_XENLA : 793- 820: isctm PsiEigTVGggtnLapqqAcLQMlgVqG astet MVAA_PSEMV : 199- 225: aeava PlmEaiTGGqvr-LrilsNlADLrlArA qvrit O 15: 35.5760 20( 20) G-x-[IV]-G-G-[AG]-T-x(3)-[AGPS]-x(2)-[AQ]-x(4)-[ILM]-x-[GILV]-x(2)-[ADPST] Occurences: 20(20) HMD1_ARATH : 508- 531: psiev GtVGGGTqlaSqsAclnlLgVkgA stesp HMD1_DICDI : 480- 503: psiev GtVGGGTslpAqsAcldiIgVkgS ssskp HMD1_HEVBR : 497- 520: psiev GtVGGGTqlaSqsAclnlLgVkgA nkesp HMD1_YEAST : 957- 980: psiev GtIGGGTvlePqgAmldlLgVrgP hatap HMD2_ARATH : 481- 504: pciev GtVGGGTqlaSqaAclnlLgVkgS nnekp HMD2_DICDI : 391- 414: psiev GtVGGGThlpAqsAcldlLkIrgA nlerp HMD2_HEVBR : 132- 155: psiev GtVGGGTqlaSqsAclnlLgVmgA ckesp HMD2_YEAST : 953- 976: psiev GtIGGGTvlePqgAmldlLgVrgP hptep HMD3_HEVBR : 508- 531: psiel GtVGGGTqlaSqsAclnlLgVkgA skdsp HMDH_CATRO : 516- 539: psiev GtVGGGTqlaSqsAclnlLgVkgA skdsp HMDH_CRIGR : 802- 825: psiei GtVGGGTnllPqqAclqmLgVqgA ckdnp HMDH_DROME : 825- 848: pslev GtVGGGTglpGqsAclemLgVrgA hatrp HMDH_HUMAN : 803- 826: psiei GtVGGGTnllPqqAclqmLgVqgA ckdnp HMDH_MESAU : 802- 825: psiei GtVGGGTnllPqqAclqmLgVqgA ckdnp HMDH_MOUSE : 139- 162: psiei GtVGGGTnllPqqAclqmLgVqgA ckdnp HMDH_NICSY : 526- 549: psiev GtVGGGTqlaSqsAclnlLgVkgA nrevp HMDH_SCHMA : 812- 835: pclev GtVGGGTrlsGqrAcldlLdLsvD rpteh HMDH_STRPU : 819- 842: psiel GtVGGGTvlpPqsAclqmMdVkgS nihgs HMDH_XENLA : 798- 821: psiei GtVGGGTnlaPqqAclqmLgVqgA stetp MVAA_PSEMV : 326- 349: mpmpv GlVGGATkthPlaQlslrIlGvkT aqala P 16: 34.4138 20( 20) K-x-[AQS]-x-[ILV]-N-x(3)-G-x(0,2)-R-[DG]-x(2)-V-x-[ACT]-x-[AC] Occurences: 20(20) HMD1_ARATH : 398- 416: fcsdk KpAaVNwieG--RGksVvCeA virge HMD1_DICDI : 370- 388: mctdk KpSsINwteG--RGrsVvCeA mitgd HMD1_HEVBR : 387- 405: fcsdk KpAaVNwieG--RGksVvCeA iikee HMD1_YEAST : 849- 867: yctdk KpAaINwieG--RGksVvAeA tipgd HMD2_ARATH : 373- 391: ycsdk KaSaVNwieG--RGkhVvCeA fikae HMD2_DICDI : 281- 299: vctdk KpSsINwleG--RGksVvAeA visgd HMD2_HEVBR : 22- 40: fcsdk KpAaVNwieG--RGksVvCeA iikee HMD2_YEAST : 845- 863: yctdk KpAaINwieG--RGksVvAeA tipgd HMD3_HEVBR : 398- 416: fcadk KaAaVNwieG--RGksVvCeA iikee HMDH_CATRO : 406- 424: fcadk KpAaVNwieG--RGksVvCeA iikee HMDH_CRIGR : 691- 709: yctdk KpAaINwieG--RGktVvCeA vipak HMDH_DROME : 714- 732: fccdk KpAaINwikG--RGkrVvTeC tisaa HMDH_HUMAN : 692- 710: yctdk KpAaINwieG--RGksVvCeA vipak HMDH_MESAU : 691- 709: yctdk KpAaVNwieG--RGktVvCeA vipar HMDH_MOUSE : 28- 46: yctdk KpAaINwieG--RGktVvCeA vipak HMDH_NICSY : 416- 434: fcsdk KpAaVNwieG--RGksVvCeA iitee HMDH_SCHMA : 700- 718: mctdk KpAtINtilG--RGksViAeA hlsad HMDH_STRPU : 708- 726: yctdk KvAaINwieG--RGksVvCeA tvpah HMDH_XENLA : 687- 705: yctdk KpAaINwieG--RGksVvCeA iipak MVAA_PSEMV : 145- 165: elanr KdQlLNslgGgcRDieVhTfA dtprg Q 17: 31.8511 30( 20) V-G-x(0,2)-G-G-x(0,1)-T-x(3)-[AGPS]-x(2)-[AQ]-x(4)-[ILM]-x-[GILV]-x(2)-[ADPST] Occurences: 30(20) HMD1_ARATH : 507- 531: mpsie VGtvGGgTqlaSqsAclnlLgVkgA stesp HMD1_ARATH : 510- 531: ievgt VG--GG-TqlaSqsAclnlLgVkgA stesp HMD1_DICDI : 479- 503: mpsie VGtvGGgTslpAqsAcldiIgVkgS ssskp HMD1_DICDI : 482- 503: ievgt VG--GG-TslpAqsAcldiIgVkgS ssskp HMD1_HEVBR : 496- 520: mpsie VGtvGGgTqlaSqsAclnlLgVkgA nkesp HMD1_HEVBR : 499- 520: ievgt VG--GG-TqlaSqsAclnlLgVkgA nkesp HMD1_YEAST : 956- 980: mpsie VGtiGGgTvlePqgAmldlLgVrgP hatap HMD2_ARATH : 480- 504: mpcie VGtvGGgTqlaSqaAclnlLgVkgS nnekp HMD2_ARATH : 483- 504: ievgt VG--GG-TqlaSqaAclnlLgVkgS nnekp HMD2_DICDI : 390- 414: mpsie VGtvGGgThlpAqsAcldlLkIrgA nlerp HMD2_DICDI : 393- 414: ievgt VG--GG-ThlpAqsAcldlLkIrgA nlerp HMD2_HEVBR : 131- 155: lpsie VGtvGGgTqlaSqsAclnlLgVmgA ckesp HMD2_HEVBR : 134- 155: ievgt VG--GG-TqlaSqsAclnlLgVmgA ckesp HMD2_YEAST : 952- 976: mpsie VGtiGGgTvlePqgAmldlLgVrgP hptep HMD3_HEVBR : 510- 531: ielgt VG--GG-TqlaSqsAclnlLgVkgA skdsp HMDH_CATRO : 515- 539: mpsie VGtvGGgTqlaSqsAclnlLgVkgA skdsp HMDH_CATRO : 518- 539: ievgt VG--GG-TqlaSqsAclnlLgVkgA skdsp HMDH_CRIGR : 804- 825: ieigt VG--GG-TnllPqqAclqmLgVqgA ckdnp HMDH_DROME : 824- 848: mpsle VGtvGGgTglpGqsAclemLgVrgA hatrp HMDH_DROME : 827- 848: levgt VG--GG-TglpGqsAclemLgVrgA hatrp HMDH_HUMAN : 805- 826: ieigt VG--GG-TnllPqqAclqmLgVqgA ckdnp HMDH_MESAU : 804- 825: ieigt VG--GG-TnllPqqAclqmLgVqgA ckdnp HMDH_MOUSE : 141- 162: ieigt VG--GG-TnllPqqAclqmLgVqgA ckdnp HMDH_NICSY : 525- 549: mpsie VGtvGGgTqlaSqsAclnlLgVkgA nrevp HMDH_NICSY : 528- 549: ievgt VG--GG-TqlaSqsAclnlLgVkgA nrevp HMDH_SCHMA : 811- 835: mpcle VGtvGGgTrlsGqrAcldlLdLsvD rpteh HMDH_SCHMA : 814- 835: levgt VG--GG-TrlsGqrAcldlLdLsvD rpteh HMDH_STRPU : 821- 842: ielgt VG--GG-TvlpPqsAclqmMdVkgS nihgs HMDH_XENLA : 800- 821: ieigt VG--GG-TnlaPqqAclqmLgVqgA stetp MVAA_PSEMV : 325- 349: empmp VGlvGGaTkthPlaQlslrIlGvkT aqala R 18: 31.7408 20( 20) V-x(3,4)-E-L-[GPS]-x(2)-[ASV]-A-x-[ADNSV]-x-[DGQS]-x(4)-[ADS]-x-[LM] Occurences: 20(20) HMD1_ARATH : 551- 572: ivaga Vlag-ELSlmSAiAaGqlvrShM kynrs HMD1_DICDI : 523- 544: tiasa Vmag-ELSlmSAlSaGhlmkShL qynra HMD1_HEVBR : 540- 561: ivags Vlag-ELSlmSAiAaGqlvkShM kynrs HMD1_YEAST : 1000- 1021: ivaca Vlag-ELSlcAAlAaGhlvqShM thnrk HMD2_ARATH : 524- 545: ivags Vlag-ELSlmSAiAaGqlvkShM kynrs HMD2_DICDI : 434- 455: vvaaa Vlsg-ELSlmSAlAaGhlvrShL khnrk HMD2_HEVBR : 175- 196: ivags Vlag-ELSlmSAiAaGqlvkShM kynrs HMD2_YEAST : 996- 1017: iiaca Vlag-ELSlcSAlAaGhlvqShM thnrk HMD3_HEVBR : 551- 572: ivags Vlag-ELSlmSAiAaGqlvnShM kynrs HMDH_CATRO : 559- 580: ivags Vlag-ELSlmSAiSaGqlvrShM kynrs HMDH_CRIGR : 845- 866: ivcgt Vmag-ELSlmAAlAaGhlvrShM vhnrs HMDH_DROME : 868- 889: ivcat Vmag-ELSlmAAlVnSdlvkShM rhnrs HMDH_HUMAN : 846- 867: ivcgt Vmag-ELSlmAAlAaGhlvkShM ihnrs HMDH_MESAU : 845- 866: ivcgt Vmag-ELSlmAAlAaGhlvrShM vhnrs HMDH_MOUSE : 182- 203: ivcgt Vmag-ELSlmAAlAaGhlvrShM vhnrs HMDH_NICSY : 569- 590: ivags Vlag-ELSlmSAiSaGqlvkShM kynrs HMDH_SCHMA : 849- 870: iiagt Vlaa-ELSlmAAlDtDdlvkAhM hfnra HMDH_STRPU : 862- 883: ivcat Vmag-ELSlmSAlAaGhlvkShM khnrs HMDH_XENLA : 841- 862: ivcst Vmag-ELSlmAAlAaGhlvkShM vhnrs MVAA_PSEMV : 54- 76: gmien VigtfELPyaVAsNfQingrDvL vplvv S 19: 25.3251 25( 20) A-x(3)-[DGS]-x-L-[LMV]-x-S-x(4)-[CN]-R Occurences: 25(20) HMD1_ARATH : 561- 576: lslms AiaaGqLVrShmkyNR ssrdi HMD1_DICDI : 533- 548: lslms AlsaGhLMkShlqyNR aktn HMD1_HEVBR : 550- 565: lslms AiaaGqLVkShmkyNR sskdm HMD1_YEAST : 1010- 1025: lslca AlaaGhLVqShmthNR kpaep HMD2_ARATH : 534- 549: lslms AiaaGqLVkShmkyNR ssrdi HMD2_DICDI : 444- 459: lslms AlaaGhLVrShlkhNR kteap HMD2_HEVBR : 185- 200: lslms AiaaGqLVkShmkyNR sskdv HMD2_YEAST : 1006- 1021: lslcs AlaaGhLVqShmthNR ktnka HMD3_HEVBR : 561- 576: lslms AiaaGqLVnShmkyNR sakdv HMDH_CATRO : 569- 584: lslms AisaGqLVrShmkyNR sskdi HMDH_CRIGR : 555- 570: yqvpm AtteGcLVaStnrgCR aiglg HMDH_CRIGR : 855- 870: lslma AlaaGhLVrShmvhNR skinl HMDH_DROME : 878- 893: lslma AlvnSdLVkShmrhNR ssiav HMDH_HUMAN : 556- 571: fqvpm AtteGcLVaStnrgCR aiglg HMDH_HUMAN : 856- 871: lslma AlaaGhLVkShmihNR skinl HMDH_MESAU : 555- 570: yqvpm AtteGcLVaStnrgCR aiglg HMDH_MESAU : 855- 870: lslma AlaaGhLVrShmvhNR skinl HMDH_MOUSE : 192- 207: lslma AlaaGhLVrShmvhNR skinl HMDH_NICSY : 579- 594: lslms AisaGqLVkShmkyNR stkdv HMDH_SCHMA : 564- 579: hyipl AtteGcLVaStnrgCR aifla HMDH_STRPU : 572- 587: fqvpm AtteGcLVaStnrgCR alrsa HMDH_STRPU : 872- 887: lslms AlaaGhLVkShmkhNR salni HMDH_XENLA : 551- 566: yqvpm AtteGcLVaStnrgCR aimlg HMDH_XENLA : 851- 866: lslma AlaaGhLVkShmvhNR skinl MVAA_PSEMV : 142- 157: eiiel AnrkDqLLnSlgggCR dievh T 20: 25.3197 20( 20) N-x(3,5)-G-x(0,1)-R-G-[DKR]-x-V-x(3)-[AC] Occurences: 20(20) HMD1_ARATH : 403- 416: kpaav Nwie--G-RGKsVvceA virge HMD1_DICDI : 375- 388: kpssi Nwte--G-RGRsVvceA mitgd HMD1_HEVBR : 392- 405: kpaav Nwie--G-RGKsVvceA iikee HMD1_YEAST : 854- 867: kpaai Nwie--G-RGKsVvaeA tipgd HMD2_ARATH : 378- 391: kasav Nwie--G-RGKhVvceA fikae HMD2_DICDI : 286- 299: kpssi Nwle--G-RGKsVvaeA visgd HMD2_HEVBR : 27- 40: kpaav Nwie--G-RGKsVvceA iikee HMD2_YEAST : 850- 863: kpaai Nwie--G-RGKsVvaeA tipgd HMD3_HEVBR : 403- 416: kaaav Nwie--G-RGKsVvceA iikee HMDH_CATRO : 411- 424: kpaav Nwie--G-RGKsVvceA iikee HMDH_CRIGR : 696- 709: kpaai Nwie--G-RGKtVvceA vipak HMDH_DROME : 719- 732: kpaai Nwik--G-RGKrVvteC tisaa HMDH_HUMAN : 697- 710: kpaai Nwie--G-RGKsVvceA vipak HMDH_MESAU : 696- 709: kpaav Nwie--G-RGKtVvceA vipar HMDH_MOUSE : 33- 46: kpaai Nwie--G-RGKtVvceA vipak HMDH_NICSY : 421- 434: kpaav Nwie--G-RGKsVvceA iitee HMDH_SCHMA : 705- 718: kpati Ntil--G-RGKsViaeA hlsad HMDH_STRPU : 713- 726: kvaai Nwie--G-RGKsVvceA tvpah HMDH_XENLA : 692- 705: kpaai Nwie--G-RGKsVvceA iipak MVAA_PSEMV : 388- 404: alhar NiavvaGaRGDeVdwvA rqlve Number of patterns evaluated by Pratt:9248 Total running time: 23 seconds