------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 33 sequences from file HISTONE_LIKE PATTERN CONSERVATION: CM: min Nr of Seqs to Match 33 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename HISTONE_LIKE.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: DBH1_BIFLO 27 DBH1_RHILE 91 DBH5_RHILE 91 DBHA_ECOLI 90 DBHA_HAEIN 90 DBHA_SALTY 90 DBHB_ECOLI 90 DBHB_SALTY 90 DBH_ANASP 94 DBH_BACST 90 DBH_BACSU 92 DBH_CLOPA 91 DBH_CRYPH 93 DBH_PSEAE 90 DBH_RHIME 90 DBH_SYNY1 32 DBH_THEAC 90 DBH_THEMA 90 DBH_THETH 95 DBH_VIBPR 90 HLIK_ASFB7 104 IHFA_ECOLI 99 IHFA_ERWCH 99 IHFA_HAEIN 96 IHFA_RHOCA 99 IHFA_SALTY 99 IHFA_SERMA 99 IHFB_ECOLI 94 IHFB_ERWCH 94 IHFB_HAEIN 94 IHFB_RHOCA 95 IHFB_SERMA 94 TF1_BPSP1 99 Pratt run started at Thu Feb 6 19:54:18 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 7.8401 89( 33) K-x(1,2)-L 2: 7.3401 92( 33) A-x(2,4)-V 3: 7.3401 102( 33) K-x(2,4)-A 4: 7.3401 61( 33) T-x(0,2)-K 5: 7.3401 70( 33) L-x(0,2)-A 6: 7.3401 63( 33) V-x(0,2)-K Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 7.8401 89( 33) K-x(1,2)-L B 2: 7.3401 92( 33) A-x(2,4)-V C 3: 7.3401 102( 33) K-x(2,4)-A D 4: 7.3401 61( 33) T-x(0,2)-K E 5: 7.3401 70( 33) L-x(0,2)-A F 6: 7.3401 63( 33) V-x(0,2)-K Best patterns with alignements: fitness hits(seqs) Pattern A 1: 7.8401 89( 33) K-x(1,2)-L Occurences: 89(33) DBH1_BIFLO : 4- 7: ayn KsdL vskia DBH1_BIFLO : 14- 17: skiaq KsnL tkaqa DBH1_RHILE : 3- 6: mn KneL vsava DBH1_RHILE : 13- 16: savae KagL tkada DBH1_RHILE : 83- 85: kfsag Kg-L kdavn DBH5_RHILE : 3- 6: mn KneL vsava DBH5_RHILE : 13- 16: savae KagL tksda DBH5_RHILE : 83- 85: kftpg Kg-L kdavn DBHA_ECOLI : 3- 6: mn KtqL idvia DBHA_ECOLI : 13- 16: dviae KaeL sktqa DBHA_ECOLI : 22- 25: sktqa KaaL estla DBHA_ECOLI : 83- 85: afvsg Ka-L kdavk DBHA_HAEIN : 3- 6: mn KtdL idaia DBHA_HAEIN : 22- 25: nkkqa KaaL eatld DBHA_HAEIN : 83- 85: afvsg Ka-L kdaik DBHA_SALTY : 3- 6: mn KtqL idvia DBHA_SALTY : 13- 16: dviad KaeL sktqa DBHA_SALTY : 22- 25: sktqa KaaL estla DBHA_SALTY : 83- 85: afvsg Ka-L kdavk DBHB_ECOLI : 3- 6: mn KsqL idkia DBHB_ECOLI : 83- 85: sfrag Ka-L kdavn DBHB_SALTY : 3- 6: mn KsqL iekia DBHB_SALTY : 83- 85: sfrag Ka-L kdavn DBH_ANASP : 3- 6: mn KgeL vdava DBH_ANASP : 41- 44: vsrgd KvtL vgfgs DBH_BACST : 3- 6: mn KteL inava DBH_BACST : 41- 44: lrkgd KvqL igfgn DBH_BACST : 83- 85: afkpg Ka-L kdavk DBH_BACSU : 3- 6: mn KteL inava DBH_BACSU : 41- 44: lkngd KiqL igfgn DBH_BACSU : 83- 85: afkpg Ka-L kdava DBH_CLOPA : 3- 6: mn KaeL itsma DBH_CLOPA : 13- 16: tsmae KskL tkkda DBH_CLOPA : 26- 28: aelal Ka-L iesve DBH_CLOPA : 41- 44: lekge KvqL vgfgt DBH_CRYPH : 3- 6: mn KsqL iskia DBH_CRYPH : 41- 44: vatge KvtL vgfgs DBH_CRYPH : 68- 71: prtge KlfL pasri DBH_PSEAE : 3- 6: mn KsqL idaia DBH_PSEAE : 23- 25: kavag Ka-L davie DBH_RHIME : 3- 6: mn KneL vaava DBH_RHIME : 13- 16: aavad KagL skada DBH_RHIME : 83- 85: kftag Kg-L kdavn DBH_SYNY1 : 3- 6: mn KgeL vdavm DBH_THEAC : 27- 30: artvi KsfL deivs DBH_THEAC : 42- 45: anggq KinL agfgi DBH_THEMA : 3- 6: mn KkeL idrva DBH_THEMA : 4- 6: mnk Ke-L idrva DBH_THEMA : 22- 25: kkkdv KliL dtile DBH_THEMA : 83- 85: kfkpg Ka-L kekvk DBH_THETH : 8- 11: kktvt KadL vdqva DBH_THETH : 22- 24: qatgl Kl-L dvkam DBH_THETH : 46- 49: langs KvqL tgfgt DBH_THETH : 88- 90: afkpg Ka-L kdkvk DBH_VIBPR : 3- 6: mn KtqL idfia DBH_VIBPR : 13- 16: dfiae KadL skaqa DBH_VIBPR : 22- 25: skaqa KaaL eatld DBH_VIBPR : 83- 85: afvag Ka-L kdavk HLIK_ASFB7 : 11- 14: kptit KqeL yslva HLIK_ASFB7 : 26- 28: dtqln Ka-L ierif IHFA_ECOLI : 15- 18: eylfd KlgL skrda IHFA_ECOLI : 24- 26: skrda Ke-L velff IHFA_ERWCH : 15- 18: eylfe KlgL skrda IHFA_ERWCH : 24- 26: skrda Ke-L velff IHFA_HAEIN : 16- 19: eylsd KyhL skqdt IHFA_RHOCA : 3- 5: se Kt-L trmdl IHFA_SALTY : 15- 18: eylfd KlgL skrda IHFA_SALTY : 24- 26: skrda Ke-L velff IHFA_SERMA : 15- 18: ehlfe KlgL skrda IHFA_SERMA : 24- 26: skrda Kd-L velff IHFB_ECOLI : 3- 6: mt KseL ierla IHFB_ECOLI : 27- 30: vedav KemL ehmas IHFB_ECOLI : 69- 72: pktgd KveL egkyv IHFB_ECOLI : 84- 86: hfkpg Ke-L rdran IHFB_ERWCH : 3- 6: mt KseL ierla IHFB_ERWCH : 27- 30: vedav KemL eqmat IHFB_ERWCH : 69- 72: pktge KveL egkyv IHFB_ERWCH : 84- 86: hfkpg Ke-L rdran IHFB_HAEIN : 3- 6: mt KseL mekls IHFB_HAEIN : 27- 30: ienmv KgiL efisq IHFB_HAEIN : 84- 86: yfkag Ke-L karvd IHFB_RHOCA : 84- 86: ffktg Kl-L rdrln IHFB_SERMA : 3- 6: mt KseL ierla IHFB_SERMA : 27- 30: vedav KemL ehmaa IHFB_SERMA : 69- 72: pktgd KveL dgkyv IHFB_SERMA : 84- 86: hfkpg Ke-L rdran TF1_BPSP1 : 3- 6: mn KteL ikaia TF1_BPSP1 : 23- 25: qvsvs Km-L asfek TF1_BPSP1 : 41- 44: vakgd KvqL tgfln B 2: 7.3401 92( 33) A-x(2,4)-V Occurences: 92(33) DBH1_BIFLO : 22- 26: ltkaq Aeaa-V n DBH1_RHILE : 21- 25: ltkad Aasa-V davfe DBH1_RHILE : 22- 25: tkada Asa--V davfe DBH1_RHILE : 24- 28: adaas Avda-V fetvq DBH1_RHILE : 27- 32: asavd AvfetV qselk DBH1_RHILE : 73- 76: evdip Arn--V pkfsa DBH5_RHILE : 21- 25: ltksd Aasa-V davfd DBH5_RHILE : 22- 25: tksda Asa--V davfd DBH5_RHILE : 24- 28: sdaas Avda-V fdvvq DBH5_RHILE : 27- 31: asavd Avfd-V vqael DBH5_RHILE : 27- 32: asavd AvfdvV qaelk DBH5_RHILE : 73- 76: evdip Arn--V pkftp DBHA_ECOLI : 41- 45: lkegd Avql-V gfgtf DBHA_ECOLI : 72- 76: keiki Aaan-V pafvs DBHA_ECOLI : 73- 76: eikia Aan--V pafvs DBHA_ECOLI : 84- 89: fvsgk AlkdaV k DBHA_HAEIN : 72- 76: aeiqi Aask-V pafvs DBHA_HAEIN : 73- 76: eiqia Ask--V pafvs DBHA_SALTY : 41- 45: lkegd Avql-V gfgtf DBHA_SALTY : 72- 76: keiki Aaan-V pafvs DBHA_SALTY : 73- 76: eikia Aan--V pafvs DBHA_SALTY : 84- 89: fvsgk AlkdaV k DBHB_ECOLI : 27- 32: grald AiiasV teslk DBHB_ECOLI : 72- 76: keiti Aaak-V psfra DBHB_ECOLI : 73- 76: eitia Aak--V psfra DBHB_ECOLI : 84- 89: fragk AlkdaV n DBHB_SALTY : 27- 32: grald AiiasV teslk DBHB_SALTY : 72- 76: keiti Aaak-V psfra DBHB_SALTY : 73- 76: eitia Aak--V psfra DBHB_SALTY : 84- 89: fragk AlkdaV n DBH_ANASP : 11- 16: lvdav AekasV tkkqa DBH_ANASP : 21- 24: vtkkq Ada--V ltaal DBH_ANASP : 73- 76: kmeip Atr--V pafsa DBH_BACST : 21- 25: lskkd Atka-V davfd DBH_BACST : 24- 28: kdatk Avda-V fdsit DBH_BACST : 73- 76: emeip Ask--V pafkp DBH_BACST : 84- 89: fkpgk AlkdaV k DBH_BACSU : 21- 25: lskkd Atka-V dsvfd DBH_BACSU : 24- 28: kdatk Avds-V fdtil DBH_BACSU : 73- 76: eieip Ask--V pafkp DBH_BACSU : 84- 89: fkpgk AlkdaV agk DBH_CLOPA : 27- 32: elalk AliesV eeale DBH_CLOPA : 73- 76: vinip Att--V pvfka DBH_CLOPA : 73- 78: vinip AttvpV fkagk DBH_CRYPH : 37- 42: ivdtv AtgekV tlvgf DBH_PSEAE : 24- 28: avagk Alda-V iesvt DBH_PSEAE : 27- 32: gkald AviesV tgalk DBH_PSEAE : 84- 89: xxxxx AlkdaV n DBH_RHIME : 21- 25: lskad Assa-V davfe DBH_RHIME : 24- 28: adass Avda-V fetiq DBH_RHIME : 73- 76: evdip Arn--V pkfta DBH_SYNY1 : 12- 16: vdavm Akat-V tkkqa DBH_SYNY1 : 27- 31: dafil Aldi-V a DBH_THEAC : 22- 25: ttqkv Art--V iksfl DBH_THEMA : 16- 21: akkag AkkkdV klild DBH_THEMA : 37- 42: iteal AkgekV qivgf DBH_THEMA : 56- 61: evrka AarkgV npqtr DBH_THEMA : 57- 61: vrkaa Arkg-V npqtr DBH_THEMA : 84- 89: fkpgk AlkekV k DBH_THETH : 1- 6: AakktV tkadl DBH_THETH : 2- 6: a Akkt-V tkadl DBH_THETH : 9- 12: ktvtk Adl--V dqvaq DBH_THETH : 32- 37: kamvd AllakV eeala DBH_THETH : 42- 47: veeal AngskV qltgf DBH_THETH : 62- 66: vrkrk Artg-V kpgtk DBH_THETH : 89- 94: fkpgk AlkdkV k DBH_VIBPR : 27- 32: kaale AtldgV tdalk DBH_VIBPR : 72- 76: aeiqi Aaan-V pafva DBH_VIBPR : 73- 76: eiqia Aan--V pafva DBH_VIBPR : 84- 89: fvagk AlkdaV k HLIK_ASFB7 : 95- 99: avkir Alkp-V hdmln IHFA_ECOLI : 23- 27: lskrd Akel-V elffe IHFA_ECOLI : 75- 78: dipit Arr--V vtfrp IHFA_ECOLI : 75- 79: dipit Arrv-V tfrpg IHFA_ERWCH : 23- 27: lskrd Akel-V elffe IHFA_ERWCH : 75- 78: dipit Arr--V vtfrp IHFA_ERWCH : 75- 79: dipit Arrv-V tfrpg IHFA_HAEIN : 76- 79: vvpvs Arr--V vtfkp IHFA_HAEIN : 76- 80: vvpvs Arrv-V tfkpg IHFA_RHOCA : 13- 18: mdlse AvfreV glsrn IHFA_RHOCA : 26- 29: srnes Aql--V etvlq IHFA_SALTY : 23- 27: lskrd Akel-V elffe IHFA_SALTY : 75- 78: dipit Arr--V vtfrp IHFA_SALTY : 75- 79: dipit Arrv-V tfrpg IHFA_SERMA : 23- 27: lskrd Akdl-V elffe IHFA_SERMA : 75- 78: dipit Arr--V vtfrp IHFA_SERMA : 75- 79: dipit Arrv-V tfrpg IHFB_ECOLI : 19- 22: qship Akt--V edavk IHFB_ERWCH : 19- 22: qship Akv--V edavk IHFB_ERWCH : 57- 60: slhyr Apr--V grnpk IHFB_HAEIN : 74- 77: svnls Aks--V pyfka IHFB_HAEIN : 88- 92: gkelk Arvd-V qa IHFB_RHOCA : 38- 43: iieam ArgdrV elrgf IHFB_RHOCA : 50- 53: lrgfg Afs--V kkrda IHFB_SERMA : 19- 22: qship Aka--V edavk IHFB_SERMA : 21- 26: hipak AvedaV kemle IHFB_SERMA : 57- 60: slhyr Apr--V grnpk TF1_BPSP1 : 37- 42: ttetv AkgdkV qltgf TF1_BPSP1 : 72- 75: ealei Aps--V gvsvk TF1_BPSP1 : 72- 77: ealei ApsvgV svkpg C 3: 7.3401 102( 33) K-x(2,4)-A Occurences: 102(33) DBH1_BIFLO : 19- 22: ksnlt Kaq--A eaavn DBH1_BIFLO : 19- 24: ksnlt KaqaeA avn DBH1_RHILE : 18- 21: kaglt Kad--A asavd DBH1_RHILE : 18- 22: kaglt Kada-A savda DBH1_RHILE : 78- 81: arnvp Kfs--A gkglk DBH1_RHILE : 83- 88: kfsag KglkdA vns DBH5_RHILE : 18- 21: kaglt Ksd--A asavd DBH5_RHILE : 18- 22: kaglt Ksda-A savda DBH5_RHILE : 83- 88: kftpg KglkdA vng DBHA_ECOLI : 18- 21: kaels Ktq--A kaale DBHA_ECOLI : 18- 23: kaels KtqakA alest DBHA_ECOLI : 37- 41: itesl Kegd-A vqlvg DBHA_ECOLI : 51- 56: gfgtf KvnhrA ertgr DBHA_ECOLI : 67- 72: npqtg KeikiA aanvp DBHA_ECOLI : 70- 73: tgkei Kia--A anvpa DBHA_ECOLI : 70- 74: tgkei Kiaa-A nvpaf DBHA_ECOLI : 83- 88: afvsg KalkdA vk DBHA_HAEIN : 18- 21: aaeln Kkq--A kaale DBHA_HAEIN : 18- 23: aaeln KkqakA aleat DBHA_HAEIN : 19- 23: aelnk Kqak-A aleat DBHA_HAEIN : 19- 24: aelnk KqakaA leatl DBHA_HAEIN : 22- 27: nkkqa KaaleA tldai DBHA_HAEIN : 51- 56: gfgtf KvnerA artgr DBHA_HAEIN : 75- 78: qiaas Kvp--A fvsgk DBHA_HAEIN : 83- 88: afvsg KalkdA ik DBHA_SALTY : 18- 21: kaels Ktq--A kaale DBHA_SALTY : 18- 23: kaels KtqakA alest DBHA_SALTY : 37- 41: itesl Kegd-A vqlvg DBHA_SALTY : 51- 56: gfgtf KvnhrA ertgr DBHA_SALTY : 67- 72: npqtg KeikiA aanvp DBHA_SALTY : 70- 73: tgkei Kia--A anvpa DBHA_SALTY : 70- 74: tgkei Kiaa-A nvpaf DBHA_SALTY : 83- 88: afvsg KalkdA vk DBHB_ECOLI : 9- 12: sqlid Kia--A gadis DBHB_ECOLI : 9- 14: sqlid KiaagA diska DBHB_ECOLI : 18- 21: gadis Kaa--A grald DBHB_ECOLI : 53- 56: gtfav Ker--A artgr DBHB_ECOLI : 53- 57: gtfav Kera-A rtgrn DBHB_ECOLI : 67- 72: npqtg KeitiA aakvp DBHB_ECOLI : 83- 88: sfrag KalkdA vn DBHB_SALTY : 9- 12: sqlie Kia--A gadis DBHB_SALTY : 9- 14: sqlie KiaagA diska DBHB_SALTY : 18- 21: gadis Kaa--A grald DBHB_SALTY : 53- 56: gtfav Ker--A artgr DBHB_SALTY : 53- 57: gtfav Kera-A rtgrn DBHB_SALTY : 67- 72: npqtg KeitiA aakvp DBHB_SALTY : 83- 88: sfrag KalkdA vn DBH_ANASP : 18- 21: kasvt Kkq--A davlt DBH_ANASP : 18- 23: kasvt KkqadA vltaa DBH_ANASP : 19- 23: asvtk Kqad-A vltaa DBH_ANASP : 68- 73: pktne KmeipA trvpa DBH_BACST : 18- 21: tsgls Kkd--A tkavd DBH_BACST : 19- 24: sglsk KdatkA vdavf DBH_BACST : 23- 27: kkdat Kavd-A vfdsi DBH_BACST : 75- 78: eipas Kvp--A fkpgk DBH_BACST : 80- 84: kvpaf Kpgk-A lkdav DBH_BACST : 83- 88: afkpg KalkdA vk DBH_BACSU : 18- 21: asels Kkd--A tkavd DBH_BACSU : 19- 24: selsk KdatkA vdsvf DBH_BACSU : 75- 78: eipas Kvp--A fkpgk DBH_BACSU : 80- 84: kvpaf Kpgk-A lkdav DBH_BACSU : 83- 88: afkpg KalkdA vagk DBH_BACSU : 86- 90: pgkal Kdav-A gk DBH_CLOPA : 18- 21: ksklt Kkd--A elalk DBH_CLOPA : 19- 24: skltk KdaelA lkali DBH_CRYPH : 68- 73: prtge KlflpA sript DBH_PSEAE : 18- 21: saxxx Kav--A gkald DBH_PSEAE : 23- 27: kavag Kald-A viesv DBH_PSEAE : 53- 56: gtfav Ker--A artgr DBH_PSEAE : 53- 57: gtfav Kera-A rtgrn DBH_RHIME : 3- 8: mn KnelvA avadk DBH_RHIME : 18- 21: kagls Kad--A ssavd DBH_RHIME : 78- 81: arnvp Kft--A gkglk DBH_RHIME : 83- 88: kftag KglkdA vn DBH_SYNY1 : 18- 21: katvt Kkq--A dafil DBH_SYNY1 : 18- 23: katvt KkqadA filal DBH_SYNY1 : 19- 23: atvtk Kqad-A filal DBH_THEAC : 9- 12: isels Kev--A kkant DBH_THEAC : 42- 46: anggq Kinl-A gfgif DBH_THEAC : 77- 82: vpskk KfvfrA sskik DBH_THEMA : 12- 16: idrva Kkag-A kkkdv DBH_THEMA : 13- 16: drvak Kag--A kkkdv DBH_THEMA : 54- 57: sfevr Kaa--A rkgvn DBH_THEMA : 80- 84: kvpkf Kpgk-A lkekv DBH_THETH : 4- 9: aak KtvtkA dlvdq DBH_THETH : 27- 32: klldv KamvdA llakv DBH_THETH : 36- 40: dalla Kvee-A langs DBH_THETH : 59- 62: tfevr Krk--A rtgvk DBH_THETH : 73- 78: pgtke KikipA tqypa DBH_THETH : 75- 78: tkeki Kip--A tqypa DBH_THETH : 85- 89: qypaf Kpgk-A lkdkv DBH_VIBPR : 18- 21: kadls Kaq--A kaale DBH_VIBPR : 18- 23: kadls KaqakA aleat DBH_VIBPR : 22- 27: skaqa KaaleA tldgv DBH_VIBPR : 51- 56: gfgtf KvnhrA artgr DBH_VIBPR : 64- 67: tgrnp Ktg--A eiqia DBH_VIBPR : 83- 88: afvag KalkdA vk HLIK_ASFB7 : 38- 43: ftsqq KiiqnA lkhnq HLIK_ASFB7 : 64- 68: tvvtv Kakp-A rqghn HLIK_ASFB7 : 85- 90: iqika KpehkA vkira HLIK_ASFB7 : 92- 95: ehkav Kir--A lkpvh IHFA_ECOLI : 20- 23: klgls Krd--A kelve IHFA_ERWCH : 20- 23: klgls Krd--A kelve IHFA_HAEIN : 87- 90: fkpgq Klr--A rvekt IHFA_RHOCA : 90- 94: pshlm Kdrv-A ernak IHFA_SALTY : 20- 23: klgls Krd--A kelve IHFA_SERMA : 20- 23: klgls Krd--A kdlve IHFB_ECOLI : 20- 25: shipa KtvedA vkeml IHFB_ERWCH : 20- 25: shipa KvvedA vkeml IHFB_HAEIN : 9- 12: selme Kls--A kqptl IHFB_HAEIN : 84- 88: yfkag Kelk-A rvdvq IHFB_RHOCA : 54- 58: gafsv Kkrd-A rtgrn IHFB_RHOCA : 55- 58: afsvk Krd--A rtgrn IHFB_SERMA : 20- 25: shipa KavedA vkeml TF1_BPSP1 : 8- 11: kteli Kai--A qdtel TF1_BPSP1 : 23- 26: qvsvs Kml--A sfeki TF1_BPSP1 : 51- 54: gflni Kpv--A rqark TF1_BPSP1 : 86- 89: pgesl Kka--A eglky TF1_BPSP1 : 93- 98: aaegl KyedfA k D 4: 7.3401 61( 33) T-x(0,2)-K Occurences: 61(33) DBH1_BIFLO : 18- 19: qksnl T--K aqaea DBH1_RHILE : 17- 18: ekagl T--K adaas DBH5_RHILE : 17- 18: ekagl T--K sdaas DBH5_RHILE : 58- 59: shraa T--K grnps DBH5_RHILE : 80- 83: nvpkf TpgK glkda DBHA_ECOLI : 19- 22: aelsk TqaK aales DBHA_ECOLI : 49- 51: lvgfg Tf-K vnhra DBHA_ECOLI : 65- 67: grnpq Tg-K eikia DBHA_HAEIN : 49- 51: ligfg Tf-K vnera DBHA_SALTY : 19- 22: aelsk TqaK aales DBHA_SALTY : 49- 51: lvgfg Tf-K vnhra DBHA_SALTY : 65- 67: grnpq Tg-K eikia DBHB_ECOLI : 65- 67: grnpq Tg-K eitia DBHB_SALTY : 65- 67: grnpq Tg-K eitia DBH_ANASP : 17- 18: ekasv T--K kqada DBH_ANASP : 17- 19: ekasv Tk-K qadav DBH_ANASP : 65- 68: grnpk TneK meipa DBH_BACST : 22- 23: skkda T--K avdav DBH_BACSU : 22- 23: skkda T--K avdsv DBH_CLOPA : 17- 18: ekskl T--K kdael DBH_CLOPA : 17- 19: ekskl Tk-K daela DBH_CLOPA : 65- 66: grnpr T--K evini DBH_CRYPH : 14- 15: kiayy T--K ysktd DBH_CRYPH : 38- 41: vdtva TgeK vtlvg DBH_CRYPH : 65- 68: grnpr TgeK lflpa DBH_PSEAE : 65- 67: grnpq Tg-K xxxxx DBH_RHIME : 80- 83: nvpkf TagK glkda DBH_SYNY1 : 15- 18: vmaka TvtK kqada DBH_SYNY1 : 17- 18: akatv T--K kqada DBH_SYNY1 : 17- 19: akatv Tk-K qadaf DBH_THEAC : 17- 20: akkan TtqK vartv DBH_THEAC : 18- 20: kkant Tq-K vartv DBH_THEAC : 24- 27: qkvar TviK sflde DBH_THEAC : 66- 67: arnpq T--K kviev DBH_THEAC : 66- 68: arnpq Tk-K vievp DBH_THEMA : 65- 67: gvnpq Tr-K pitip DBH_THETH : 5- 8: aakk TvtK adlvd DBH_THETH : 7- 8: akktv T--K adlvd DBH_THETH : 19- 22: qvaqa TglK lldvk DBH_THETH : 64- 67: krkar TgvK pgtke DBH_THETH : 70- 71: gvkpg T--K ekiki DBH_THETH : 70- 73: gvkpg TkeK ikipa DBH_VIBPR : 49- 51: ligfg Tf-K vnhra HLIK_ASFB7 : 3- 4: ms T--K kkpti HLIK_ASFB7 : 3- 5: ms Tk-K kptit HLIK_ASFB7 : 3- 6: ms TkkK ptitk HLIK_ASFB7 : 8- 11: tkkkp TitK qelys HLIK_ASFB7 : 10- 11: kkpti T--K qelys HLIK_ASFB7 : 62- 64: kftvv Tv-K akpar IHFA_ECOLI : 4- 5: mal T--K aemse IHFA_ERWCH : 4- 5: mal T--K aemse IHFA_HAEIN : 3- 6: ma TitK ldiie IHFA_HAEIN : 5- 6: mati T--K ldiie IHFA_HAEIN : 24- 25: lskqd T--K nvven IHFA_HAEIN : 81- 83: arrvv Tf-K pgqkl IHFA_HAEIN : 95- 96: arvek T--K IHFA_RHOCA : 45- 47: lvrge Tv-K issfg IHFA_SALTY : 4- 5: mal T--K aemse IHFA_SERMA : 4- 5: mal T--K aemse IHFB_ECOLI : 2- 3: m T--K selie IHFB_ECOLI : 66- 69: grnpk TgdK veleg IHFB_ERWCH : 2- 3: m T--K selie IHFB_ERWCH : 66- 69: grnpk TgeK veleg IHFB_HAEIN : 2- 3: m T--K selme IHFB_RHOCA : 82- 84: vpffk Tg-K llrdr IHFB_SERMA : 2- 3: m T--K selie IHFB_SERMA : 66- 69: grnpk TgdK veldg TF1_BPSP1 : 35- 38: kitte TvaK gdkvq E 5: 7.3401 70( 33) L-x(0,2)-A Occurences: 70(33) DBH1_BIFLO : 17- 20: aqksn LtkA qaeaa DBH1_RHILE : 6- 9: mnkne LvsA vaeka DBH1_RHILE : 16- 19: aekag LtkA daasa DBH1_RHILE : 44- 45: ggdir L--A gfgsf DBH1_RHILE : 85- 88: sagkg LkdA vns DBH5_RHILE : 6- 9: mnkne LvsA vaeka DBH5_RHILE : 44- 45: kgdir L--A gfgsf DBH5_RHILE : 85- 88: tpgkg LkdA vng DBHA_ECOLI : 29- 30: alest L--A aites DBHA_ECOLI : 29- 31: alest La-A itesl DBHA_ECOLI : 85- 88: vsgka LkdA vk DBHA_HAEIN : 6- 9: mnktd LidA ianaa DBHA_HAEIN : 25- 27: qakaa Le-A tldai DBHA_HAEIN : 29- 31: aleat Ld-A itasl DBHA_HAEIN : 85- 88: vsgka LkdA ik DBHA_SALTY : 29- 30: alest L--A aites DBHA_SALTY : 29- 31: alest La-A itesl DBHA_SALTY : 85- 88: vsgka LkdA vk DBHB_ECOLI : 25- 27: aagra Ld-A iiasv DBHB_ECOLI : 85- 88: ragka LkdA vn DBHB_SALTY : 25- 27: aagra Ld-A iiasv DBHB_SALTY : 85- 88: ragka LkdA vn DBH_ANASP : 6- 9: mnkge LvdA vaeka DBH_ANASP : 25- 27: qadav Lt-A aleti DBH_ANASP : 25- 28: qadav LtaA letii DBH_BACST : 6- 9: mnkte LinA vaets DBH_BACST : 85- 88: kpgka LkdA vk DBH_BACSU : 6- 9: mnkte LinA vaeas DBH_BACSU : 33- 35: vfdti Ld-A lkngd DBH_BACSU : 85- 88: kpgka LkdA vagk DBH_CLOPA : 23- 24: kkdae L--A lkali DBH_CLOPA : 25- 27: daela Lk-A liesv DBH_CRYPH : 71- 73: geklf Lp-A sript DBH_PSEAE : 6- 9: mnksq LidA iaasa DBH_PSEAE : 25- 27: vagka Ld-A viesv DBH_PSEAE : 36- 38: svtga Lk-A gdxxx DBH_PSEAE : 85- 88: xxxxa LkdA vn DBH_RHIME : 6- 8: mnkne Lv-A avadk DBH_RHIME : 6- 9: mnkne LvaA vadka DBH_RHIME : 16- 19: adkag LskA dassa DBH_RHIME : 85- 88: tagkg LkdA vn DBH_SYNY1 : 6- 9: mnkge LvdA vmaka DBH_SYNY1 : 26- 27: adafi L--A ldiva DBH_THEAC : 45- 46: gqkin L--A gfgif DBH_THEMA : 36- 37: titea L--A kgekv DBH_THETH : 33- 35: amvda Ll-A kveea DBH_THETH : 34- 35: mvdal L--A kveea DBH_THETH : 41- 42: kveea L--A ngskv DBH_VIBPR : 16- 19: aekad LskA qakaa DBH_VIBPR : 25- 27: qakaa Le-A tldgv DBH_VIBPR : 85- 88: vagka LkdA vk HLIK_ASFB7 : 17- 19: qelys Lv-A adtql HLIK_ASFB7 : 17- 20: qelys LvaA dtqln HLIK_ASFB7 : 24- 27: aadtq LnkA lieri IHFA_ECOLI : 3- 6: ma LtkA emsey IHFA_ERWCH : 3- 6: ma LtkA emsey IHFA_HAEIN : 88- 90: kpgqk Lr-A rvekt IHFA_RHOCA : 10- 13: ltrmd LseA vfrev IHFA_SALTY : 3- 6: ma LtkA emsey IHFA_SERMA : 3- 6: ma LtkA emseh IHFB_ECOLI : 10- 11: elier L--A tqqsh IHFB_ECOLI : 37- 38: hmast L--A qgeri IHFB_ERWCH : 10- 11: elier L--A gqqsh IHFB_ERWCH : 37- 38: qmatt L--A sgdri IHFB_HAEIN : 10- 12: elmek Ls-A kqptl IHFB_HAEIN : 17- 19: akqpt Lp-A keien IHFB_HAEIN : 72- 74: gdsvn Ls-A ksvpy IHFB_HAEIN : 86- 88: kagke Lk-A rvdvq IHFB_RHOCA : 6- 8: mirse Li-A kiaee IHFB_SERMA : 10- 11: elier L--A gqqsh IHFB_SERMA : 37- 38: hmaat L--A egeri TF1_BPSP1 : 6- 9: mnkte LikA iaqdt TF1_BPSP1 : 25- 26: svskm L--A sfeki TF1_BPSP1 : 69- 72: qtqea LeiA psvgv TF1_BPSP1 : 85- 88: kpges LkkA aeglk F 6: 7.3401 63( 33) V-x(0,2)-K Occurences: 63(33) DBH1_BIFLO : 8- 10: nksdl Vs-K iaqks DBH1_RHILE : 10- 13: elvsa VaeK agltk DBH1_RHILE : 76- 78: iparn Vp-K fsagk DBH5_RHILE : 10- 13: elvsa VaeK agltk DBH5_RHILE : 76- 78: iparn Vp-K ftpgk DBHA_ECOLI : 80- 83: nvpaf VsgK alkda DBHA_ECOLI : 89- 90: alkda V--K DBHA_HAEIN : 80- 83: kvpaf VsgK alkda DBHA_SALTY : 80- 83: nvpaf VsgK alkda DBHA_SALTY : 89- 90: alkda V--K DBHB_ECOLI : 52- 53: fgtfa V--K eraar DBHB_SALTY : 52- 53: fgtfa V--K eraar DBH_ANASP : 10- 13: elvda VaeK asvtk DBH_ANASP : 16- 18: aekas Vt-K kqada DBH_ANASP : 16- 19: aekas VtkK qadav DBH_BACST : 89- 90: alkda V--K DBH_BACSU : 89- 92: alkda VagK DBH_CLOPA : 78- 80: attvp Vf-K agkef DBH_CLOPA : 89- 91: efkdk Vn-K DBH_CRYPH : 89- 91: ffrnk Vn-K tf DBH_PSEAE : 20- 23: xxxka VagK aldav DBH_PSEAE : 52- 53: fgtfa V--K eraar DBH_RHIME : 10- 13: elvaa VadK aglsk DBH_RHIME : 76- 78: iparn Vp-K ftagk DBH_SYNY1 : 10- 13: elvda VmaK atvtk DBH_SYNY1 : 16- 18: makat Vt-K kqada DBH_SYNY1 : 16- 19: makat VtkK qadaf DBH_THEAC : 11- 13: elske Va-K kantt DBH_THEAC : 11- 14: elske VakK anttq DBH_THEAC : 25- 27: kvart Vi-K sflde DBH_THEAC : 72- 75: kkvie VpsK kkfvf DBH_THEMA : 10- 12: elidr Va-K kagak DBH_THEMA : 10- 13: elidr VakK agakk DBH_THEMA : 21- 22: akkkd V--K lildt DBH_THEMA : 52- 54: fgsfe Vr-K aaark DBH_THEMA : 76- 78: iperk Vp-K fkpgk DBH_THEMA : 89- 90: alkek V--K DBH_THETH : 6- 8: aakkt Vt-K adlvd DBH_THETH : 26- 27: lklld V--K amvda DBH_THETH : 57- 59: fgtfe Vr-K rkart DBH_THETH : 66- 67: kartg V--K pgtke DBH_THETH : 94- 95: alkdk V--K DBH_VIBPR : 80- 83: nvpaf VagK alkda DBH_VIBPR : 89- 90: alkda V--K HLIK_ASFB7 : 61- 64: ikftv VtvK akpar HLIK_ASFB7 : 63- 64: ftvvt V--K akpar HLIK_ASFB7 : 63- 66: ftvvt VkaK parqg HLIK_ASFB7 : 91- 92: pehka V--K iralk IHFA_ECOLI : 44- 45: engeq V--K lsgfg IHFA_ERWCH : 44- 45: engeq V--K lsgfg IHFA_HAEIN : 45- 46: esgqd V--K lsgfg IHFA_HAEIN : 80- 83: sarrv VtfK pgqkl IHFA_HAEIN : 92- 94: klrar Ve-K tk IHFA_RHOCA : 46- 47: vrget V--K issfg IHFA_RHOCA : 56- 59: fgtfs VrdK tsrmg IHFA_SALTY : 44- 45: engeq V--K lsgfg IHFA_SERMA : 44- 45: engeq V--K lsgfg IHFB_ECOLI : 26- 27: tveda V--K emleh IHFB_ERWCH : 26- 27: vveda V--K emleq IHFB_HAEIN : 26- 27: eienm V--K gilef IHFB_RHOCA : 22- 24: lfqrd Ve-K ivnti IHFB_RHOCA : 53- 54: fgafs V--K krdar IHFB_RHOCA : 53- 55: fgafs Vk-K rdart IHFB_RHOCA : 72- 75: gtsva VdeK hvpff IHFB_SERMA : 26- 27: aveda V--K emleh TF1_BPSP1 : 21- 23: ltqvs Vs-K mlasf TF1_BPSP1 : 36- 38: ittet Va-K gdkvq TF1_BPSP1 : 77- 80: apsvg VsvK pgesl TF1_BPSP1 : 79- 80: svgvs V--K pgesl Number of patterns evaluated by Pratt:9 Total running time: 0 seconds