------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 18 sequences from file HEMOLYSIN_CALCIUM PATTERN CONSERVATION: CM: min Nr of Seqs to Match 18 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename HEMOLYSIN_CALCIUM.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: APRA_PSEAE 479 CYAA_BORPE 1706 HLY1_ECOLI 1023 HLYA_ACTPL 956 HLYA_ACTSU 956 HLYA_ECOLI 1024 LIPA_PSEFL 449 LIPB_PSEFL 476 LKTA_ACTAC 1050 LKTA_PASHA 953 NODO_RHILV 284 PRTA_ERWCH 472 PRTB_ERWCH 481 PRTC_ERWCH 479 PRTG_ERWCH 475 PRTX_ERWCH 478 PRZN_SERMA 487 PRZN_SERSP 486 Pratt run started at Thu Feb 6 19:53:04 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 32.3604 31( 18) G-x(3)-N-D-x(3)-G-x(3,4)-D-x(4)-G-x(1,2)-G-x-D 2: 28.1904 46( 18) L-x(1,2)-G-x(1,2)-G-x-D-x(3)-G-G-x(3)-D 3: 28.1904 49( 18) D-x(3,4)-G-x(1,2)-G-x-D-x(3)-G-G-x(3)-D 4: 28.1904 54( 18) D-x(3,4)-G-x(1,2)-G-x-D-x(4)-G-x-G-x-D 5: 28.1904 31( 18) N-D-x(3)-G-x(3,4)-D-x(4)-G-x(1,2)-G-x-D 6: 28.1904 40( 18) G-x(2,3)-G-x(4,5)-G-x(4)-D-x(3)-G-G-x(3)-D 7: 27.6904 48( 18) D-x(4,5)-G-x-G-x-D-x(3)-G-x(0,2)-G-x-D 8: 27.6904 44( 18) D-x(1,3)-G-x(1,2)-G-x-D-x(4)-G-x-G-x-D 9: 24.5203 42( 18) G-x(4,5)-G-x(4)-D-x(3)-G-G-x(3)-D 10: 24.0203 51( 18) L-x(1,2)-G-x(1,2)-G-x-D-x(4)-G-x-G 11: 24.0203 56( 18) D-x(3,4)-G-x(3)-D-x(4)-G-x(1,2)-G-x-D 12: 24.0203 59( 18) D-x(3,4)-G-x(3,4)-D-x(4)-G-x-G-x-D 13: 23.5203 34( 18) G-x-G-x-D-x(3)-G-x(0,1)-G-x(1,3)-D 14: 23.5203 50( 18) D-x(1,3)-G-x(3,4)-D-x(4)-G-x-G-x-D 15: 20.8503 55( 18) G-x-D-x(4)-G-x-G-x-D 16: 20.3503 92( 18) G-x(3,4)-D-x(4)-G-x-G-x-D 17: 20.3503 71( 18) G-x(3)-D-x(4)-G-x(1,2)-G-x-D 18: 20.3503 55( 18) G-x(4)-D-x(4)-G-x-G-x(0,1)-D 19: 19.8503 49( 18) D-x(0,1)-L-x(1,2)-G-G-x(3)-D 20: 19.8503 50( 18) G-x(0,1)-D-x(1,2)-L-x(2)-G-x(3)-D Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 45.9971 19( 18) D-x(1,3)-G-x(1,2)-G-[AD]-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DEN]-x(4)-[AEGNS] B 2: 44.5860 31( 18) D-x(3,4)-G-x(1,2)-G-[AD]-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DEN] C 3: 44.0018 26( 18) G-[DGNS]-x(2)-N-D-x-[FIL]-x-G-x(3,4)-D-x(4)-G-x(1,2)-G-x-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DEN] D 4: 43.8208 33( 18) G-x(2)-[ADGNS]-D-x(4)-G-x(1,2)-G-[ADN]-D-x-[IL]-x-[DG]-[DGN]-x-[DG]-x-[DN]-x-[FL] E 5: 43.1740 36( 18) L-x(1,2)-G-x(1,2)-G-[ADNS]-D-x-[IL]-x-[AG]-G-x-G-x-[DN]-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DN] F 6: 40.6523 32( 18) D-x(3,4)-G-x(1,2)-G-[AD]-D-x-[IL]-x-G-G-x-[DG]-x-D-x-[FIL] G 7: 40.6058 23( 18) G-x(2,3)-G-x(4,5)-G-[DGS]-x-[EG]-[AN]-D-x-[IL]-x-G-G-x(3)-D H 8: 39.8051 30( 18) G-[DGS]-x(2)-[ADN]-D-x-[FIL]-x-[AG]-G-x-G-x(0,1)-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-D I 9: 37.6001 29( 18) N-D-x-[FIL]-x-G-x(3,4)-D-x(4)-G-x(1,2)-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DEN] J 10: 37.5620 32( 18) D-x(3,4)-G-x(2)-[ADGNS]-D-x(4)-G-x(1,2)-G-x-D-x-[FIL]-x(2)-[DGNST]-x-[AGIV]-x-[DEN]-x(4)-[AGST] K 11: 37.3882 44( 18) L-x(1,2)-G-x(1,2)-G-[ADN]-D-x-[IL]-x-G-G-x-[DG]-x-D L 12: 37.2726 40( 18) G-[ADN]-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DN] M 13: 37.1873 43( 18) D-x(3,4)-G-x(3,4)-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DEN] N 14: 36.9357 25( 18) G-x(4,5)-G-[DGS]-x-[EG]-[AN]-D-x-[IL]-x-G-G-x(3)-D O 15: 36.6873 34( 18) D-x(1,3)-G-x(3,4)-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DEN] P 16: 35.1033 31( 18) D-x(4,5)-G-x-G-[ADNV]-D-x-[IL]-x-G-x(0,2)-G-x-D-x(4)-[GNSTV] Q 17: 33.1290 28( 18) G-[DGNS]-x(2)-N-D-x-[FIL]-x-G-x(3,4)-D-x(4)-G-x(1,2)-G R 18: 31.3700 27( 18) G-x-G-[ADN]-D-x-[IL]-x-G-x(0,1)-G-x(1,3)-D-x(4)-[GNSTV] S 19: 31.0240 29( 18) G-x(3,4)-D-[ILV]-[FIL]-x(2)-G-x-G-x-D-x(4)-[AGN]-x-[DEG] T 20: 29.0416 44( 18) D-x(4,5)-G-x-G-[ADNV]-D-x-[IL]-x-G-x(0,2)-G Best patterns with alignements: fitness hits(seqs) Pattern A 1: 45.9971 19( 18) D-x(1,3)-G-x(1,2)-G-[AD]-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DEN]-x(4)-[AEGNS] Occurences: 19(18) APRA_PSEAE : 365- 397: ggagn DilyGglGADqLwGGaGaDtFvyGdiaEssaaA pdtlr CYAA_BORPE : 1285- 1317: gqggd DtvrGgdGDDlLfGGdGnDmLygDagnDtlygG lgddt CYAA_BORPE : 1426- 1458: gagga DvlaGgeGDDvLlGGdGdDqLsgDagrDrlygE agddw HLY1_ECOLI : 764- 796: gdkgn DtlsGgnGDDqLyGGdGnDkLigGagnNylngG dgdde HLYA_ACTPL : 742- 774: ggngv DtidGndGDDhLfGGaGdDvIdgGngnNflvgG tgndi HLYA_ACTSU : 742- 774: ggngv DtidGndGDDhLfGGaGdDvIdgGngnNflvgG tgndi HLYA_ECOLI : 765- 797: gdkgn DtlsGgnGDDqLyGGdGnDkLigVagnNylngG dgdde LIPA_PSEFL : 378- 410: gsdgn DliqGgkGADfIeGGkGnDtIrdNsghNtflfS ghfgq LIPB_PSEFL : 378- 410: gsdgn DliqGgnGADfIeGGkGnDtIrdNsghNtflfS ghfgn LKTA_ACTAC : 793- 822: gnnyl Dg--Ge-GDDhLeGGnGsDiLrgGsgnDklfgN qgddl LKTA_PASHA : 748- 780: gndgn DrlfGgkGDDiLdGGnGdDfIdgGkgnDllhgG kgddi NODO_RHILV : 31- 60: kndwi Da--Gn-GDDrIkAGdGqDsItaGpghDivwaG kgsdv PRTA_ERWCH : 361- 393: ggagd DilyGggGADrLyGGsGrDtFvyTavsDskvaA pdwil PRTB_ERWCH : 370- 402: ggagd DvlyGstGADtLtGGaGrDiFvyGsgqDstvsA ydwit PRTC_ERWCH : 368- 400: ggagn DvlyGgaGADtLyGGaGrDtFvyGsgqDstvaA ydwia PRTG_ERWCH : 364- 396: ggagn DvlyGdgGADiLtGGaGkDiFvyAwekDslssA pdtit PRTX_ERWCH : 367- 399: ggagd DvlfGgsGADrLyGGsGrDtFvyTaasDskvaA pdwll PRZN_SERMA : 372- 404: ggagn DvlfGggGADeLwGGaGkDiFvfSaasDsapgA sdwir PRZN_SERSP : 371- 403: ggagn DvlfGggGADeLwGGaGkDiFvfSaasDsapgA sdwir B 2: 44.5860 31( 18) D-x(3,4)-G-x(1,2)-G-[AD]-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DEN] Occurences: 31(18) APRA_PSEAE : 365- 392: ggagn DilygGl-GADqLwGGaGaDtFvyGdiaE ssaaa APRA_PSEAE : 365- 392: ggagn Dily-GglGADqLwGGaGaDtFvyGdiaE ssaaa CYAA_BORPE : 1028- 1056: tgnah DnflaGgsGDDrLdGGaGnDtLvgGegqN tvigg CYAA_BORPE : 1284- 1312: mgqgg DdtvrGgdGDDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1285- 1312: gqggd DtvrgGd-GDDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1285- 1312: gqggd Dtvr-GgdGDDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1312- 1339: gdagn DtlygGl-GDDtLeGGaGnDwFgqTqarE hdvlr CYAA_BORPE : 1312- 1339: gdagn Dtly-GglGDDtLeGGaGnDwFgqTqarE hdvlr CYAA_BORPE : 1426- 1453: gagga DvlagGe-GDDvLlGGdGdDqLsgDagrD rlyge CYAA_BORPE : 1426- 1453: gagga Dvla-GgeGDDvLlGGdGdDqLsgDagrD rlyge HLY1_ECOLI : 764- 791: gdkgn DtlsgGn-GDDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 764- 791: gdkgn Dtls-GgnGDDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 821- 848: ggkgn Dkly-GseGADlLdGGeGnDlLkgGygnD iyryl HLYA_ACTPL : 742- 769: ggngv Dtid-GndGDDhLfGGaGdDvIdgGngnN flvgg HLYA_ACTSU : 742- 769: ggngv Dtid-GndGDDhLfGGaGdDvIdgGngnN flvgg HLYA_ECOLI : 765- 792: gdkgn DtlsgGn-GDDqLyGGdGnDkLigVagnN ylngg HLYA_ECOLI : 765- 792: gdkgn Dtls-GgnGDDqLyGGdGnDkLigVagnN ylngg HLYA_ECOLI : 822- 849: ggkgn Dkly-GseGADlLdGGeGdDlLkgGygnD iyryl LIPA_PSEFL : 378- 405: gsdgn DliqgGk-GADfIeGGkGnDtIrdNsghN tflfs LIPA_PSEFL : 378- 405: gsdgn Dliq-GgkGADfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 378- 405: gsdgn DliqgGn-GADfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 378- 405: gsdgn Dliq-GgnGADfIeGGkGnDtIrdNsghN tflfs LKTA_ACTAC : 817- 844: ggsgn Dklf-GnqGDDlLdGGeGdDqLagGegnD iyvyr LKTA_PASHA : 748- 775: gndgn DrlfgGk-GDDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 748- 775: gndgn Drlf-GgkGDDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 756- 784: fggkg DdildGgnGDDfIdGGkGnDlLhgGkgdD ifvhr LKTA_PASHA : 757- 784: ggkgd DildgGn-GDDfIdGGkGnDlLhgGkgdD ifvhr LKTA_PASHA : 757- 784: ggkgd Dild-GgnGDDfIdGGkGnDlLhgGkgdD ifvhr NODO_RHILV : 28- 55: ggkkn DwidaGn-GDDrIkAGdGqDsItaGpghD ivwag PRTA_ERWCH : 351- 379: ignna DnilrGgaGDDiLyGGgGaDrLygGsgrD tfvyt PRTA_ERWCH : 360- 388: rggag DdilyGggGADrLyGGsGrDtFvyTavsD skvaa PRTA_ERWCH : 361- 388: ggagd DilygGg-GADrLyGGsGrDtFvyTavsD skvaa PRTA_ERWCH : 361- 388: ggagd Dily-GggGADrLyGGsGrDtFvyTavsD skvaa PRTB_ERWCH : 369- 397: qggag DdvlyGstGADtLtGGaGrDiFvyGsgqD stvsa PRTB_ERWCH : 370- 397: ggagd Dvly-GstGADtLtGGaGrDiFvyGsgqD stvsa PRTC_ERWCH : 368- 395: ggagn DvlygGa-GADtLyGGaGrDtFvyGsgqD stvaa PRTC_ERWCH : 368- 395: ggagn Dvly-GgaGADtLyGGaGrDtFvyGsgqD stvaa PRTG_ERWCH : 364- 391: ggagn Dvly-GdgGADiLtGGaGkDiFvyAwekD slssa PRTX_ERWCH : 357- 385: ignna DntlrGgaGDDvLfGGsGaDrLygGsgrD tfvyt PRTX_ERWCH : 366- 394: rggag DdvlfGgsGADrLyGGsGrDtFvyTaasD skvaa PRTX_ERWCH : 367- 394: ggagd DvlfgGs-GADrLyGGsGrDtFvyTaasD skvaa PRTX_ERWCH : 367- 394: ggagd Dvlf-GgsGADrLyGGsGrDtFvyTaasD skvaa PRZN_SERMA : 372- 399: ggagn DvlfgGg-GADeLwGGaGkDiFvfSaasD sapga PRZN_SERMA : 372- 399: ggagn Dvlf-GggGADeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 371- 398: ggagn DvlfgGg-GADeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 371- 398: ggagn Dvlf-GggGADeLwGGaGkDiFvfSaasD sapga C 3: 44.0018 26( 18) G-[DGNS]-x(2)-N-D-x-[FIL]-x-G-x(3,4)-D-x(4)-G-x(1,2)-G-x-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DEN] Occurences: 26(18) APRA_PSEAE : 360- 392: anvlk GGagNDiLyGglgaDqlwgGa-GaDtFvyGdiaE ssaaa CYAA_BORPE : 1015- 1047: vqhii GGagNDsItGnah-DnflaGgsGdDrLdgGagnD tlvgg CYAA_BORPE : 1298- 1330: ddllf GGdgNDmLyGdagnDtlygGl-GdDtLegGagnD wfgqt CYAA_BORPE : 1307- 1339: ndmly GDagNDtLyGglgdDtlegGa-GnDwFgqTqarE hdvlr CYAA_BORPE : 1307- 1339: ndmly GDagNDtLyGglg-DdtleGgaGnDwFgqTqarE hdvlr HLY1_ECOLI : 750- 782: ddhie GNdgNDrLyGdkgnDtlsgGn-GdDqLygGdgnD kligg HLY1_ECOLI : 759- 791: ndrly GDkgNDtLsGgngdDqlygGd-GnDkLigGagnN ylngg HLY1_ECOLI : 759- 791: ndrly GDkgNDtLsGgng-DdqlyGgdGnDkLigGagnN ylngg HLY1_ECOLI : 816- 848: knvls GGkgNDkLyGsegaDlldgGe-GnDlLkgGygnD iyryl HLYA_ACTPL : 719- 751: veeii GSqfNDiFkGsqfdDvfhgGn-GvDtIdgNdgdD hlfgg HLYA_ACTPL : 719- 751: veeii GSqfNDiFkGsqf-DdvfhGgnGvDtIdgNdgdD hlfgg HLYA_ACTSU : 719- 751: veeii GSqfNDiFkGsqfdDvfhgGn-GvDtIdgNdgdD hlfgg HLYA_ACTSU : 719- 751: veeii GSqfNDiFkGsqf-DdvfhGgnGvDtIdgNdgdD hlfgg HLYA_ECOLI : 751- 783: ddlie GNdgNDrLyGdkgnDtlsgGn-GdDqLygGdgnD kligv HLYA_ECOLI : 760- 792: ndrly GDkgNDtLsGgngdDqlygGd-GnDkLigVagnN ylngg HLYA_ECOLI : 760- 792: ndrly GDkgNDtLsGgng-DdqlyGgdGnDkLigVagnN ylngg HLYA_ECOLI : 817- 849: knvlf GGkgNDkLyGsegaDlldgGe-GdDlLkgGygnD iyryl LIPA_PSEFL : 373- 405: ntfii GSdgNDlIqGgkgaDfiegGk-GnDtIrdNsghN tflfs LIPB_PSEFL : 373- 405: ntfii GSdgNDlIqGgngaDfiegGk-GnDtIrdNsghN tflfs LKTA_ACTAC : 731- 763: rdkfy GSkfNDvFhGhdg-DdliyGydGdDrLygDngnD eihgg LKTA_ACTAC : 812- 844: sdilr GGsgNDkLfGnqgdDlldgGe-GdDqLagGegnD iyvyr LKTA_ACTAC : 812- 844: sdilr GGsgNDkLfGnqg-DdlldGgeGdDqLagGegnD iyvyr LKTA_PASHA : 743- 775: vdtid GNdgNDrLfGgkgdDildgGn-GdDfIdgGkgnD llhgg LKTA_PASHA : 743- 775: vdtid GNdgNDrLfGgkg-DdildGgnGdDfIdgGkgnD llhgg NODO_RHILV : 14- 46: gsfik GSpeNDiIdGgkknDwidaGn-GdDrIkaGdgqD sitag PRTA_ERWCH : 338- 370: ienai GGsgNDlLiGnna-DnilrGgaGdDiLygGggaD rlygg PRTB_ERWCH : 347- 379: ienai GGsgNDiLiGnga-DnilqGgaGdDvLygStgaD tltgg PRTC_ERWCH : 345- 377: ienai GGsgNDiLvGnsa-DnilqGgaGnDvLygGagaD tlygg PRTC_ERWCH : 363- 395: dnilq GGagNDvLyGgagaDtlygGa-GrDtFvyGsgqD stvaa PRTG_ERWCH : 359- 391: dnrid GGagNDvLyGdggaDiltgGa-GkDiFvyAwekD slssa PRTX_ERWCH : 344- 376: ienai GGsgNDlLiGnna-DntlrGgaGdDvLfgGsgaD rlygg PRZN_SERMA : 367- 399: nnvlk GGagNDvLfGgggaDelwgGa-GkDiFvfSaasD sapga PRZN_SERSP : 366- 398: nnvlk GGagNDvLfGgggaDelwgGa-GkDiFvfSaasD sapga D 4: 43.8208 33( 18) G-x(2)-[ADGNS]-D-x(4)-G-x(1,2)-G-[ADN]-D-x-[IL]-x-[DG]-[DGN]-x-[DG]-x-[DN]-x-[FL] Occurences: 33(18) APRA_PSEAE : 361- 385: nvlkg GagNDilygGl-GADqLwGGaGaDtF vygdi CYAA_BORPE : 1280- 1305: antlm GqgGDdtvrGgdGDDlLfGGdGnDmL ygdag CYAA_BORPE : 1289- 1314: ddtvr GgdGDdllfGgdGNDmLyGDaGnDtL ygglg CYAA_BORPE : 1290- 1314: dtvrg GdgDDllfgGd-GNDmLyGDaGnDtL ygglg CYAA_BORPE : 1430- 1455: advla GgeGDdvllGgdGDDqLsGDaGrDrL ygeag CYAA_BORPE : 1431- 1455: dvlag GegDDvllgGd-GDDqLsGDaGrDrL ygeag HLY1_ECOLI : 741- 766: adifh GadGDdhieGndGNDrLyGDkGnDtL sggng HLY1_ECOLI : 768- 793: ndtls GgnGDdqlyGgdGNDkLiGGaGnNyL nggdg HLY1_ECOLI : 769- 793: dtlsg GngDDqlygGd-GNDkLiGGaGnNyL nggdg HLYA_ACTPL : 746- 771: vdtid GndGDdhlfGgaGDDvIdGGnGnNfL vggtg HLYA_ACTSU : 746- 771: vdtid GndGDdhlfGgaGDDvIdGGnGnNfL vggtg HLYA_ECOLI : 742- 767: tdifh GadGDdlieGndGNDrLyGDkGnDtL sggng LIPA_PSEFL : 383- 407: dliqg GkgADfiegGk-GNDtIrDNsGhNtF lfsgh LIPB_PSEFL : 383- 407: dliqg GngADfiegGk-GNDtIrDNsGhNtF lfsgh LKTA_ACTAC : 749- 774: ddliy GydGDdrlyGdnGNDeIhGGqGnDkL yggag LKTA_ACTAC : 804- 828: dhleg GngSDilrgGs-GNDkLfGNqGdDlL dggeg LKTA_PASHA : 752- 777: ndrlf GgkGDdildGgnGDDfIdGGkGnDlL hggkg LKTA_PASHA : 753- 777: drlfg GkgDDildgGn-GDDfIdGGkGnDlL hggkg LKTA_PASHA : 761- 786: ddild GgnGDdfidGgkGNDlLhGGkGdDiF vhrkg LKTA_PASHA : 762- 786: dildg GngDDfidgGk-GNDlLhGGkGdDiF vhrkg NODO_RHILV : 105- 129: dvlya GpgSDilvaGd-GADvLtGGdDgDaF vfrfh PRTA_ERWCH : 347- 372: ndlli GnnADnilrGgaGDDiLyGGgGaDrL yggsg PRTA_ERWCH : 356- 381: dnilr GgaGDdilyGggGADrLyGGsGrDtF vytav PRTA_ERWCH : 357- 381: nilrg GagDDilygGg-GADrLyGGsGrDtF vytav PRTB_ERWCH : 365- 390: dnilq GgaGDdvlyGstGADtLtGGaGrDiF vygsg PRTC_ERWCH : 354- 379: ndilv GnsADnilqGgaGNDvLyGGaGaDtL yggag PRTC_ERWCH : 364- 388: nilqg GagNDvlygGa-GADtLyGGaGrDtF vygsg PRTG_ERWCH : 350- 375: hdviv GnlSDnridGgaGNDvLyGDgGaDiL tggag PRTX_ERWCH : 353- 378: ndlli GnnADntlrGgaGDDvLfGGsGaDrL yggsg PRTX_ERWCH : 362- 387: dntlr GgaGDdvlfGgsGADrLyGGsGrDtF vytaa PRTX_ERWCH : 363- 387: ntlrg GagDDvlfgGs-GADrLyGGsGrDtF vytaa PRZN_SERMA : 368- 392: nvlkg GagNDvlfgGg-GADeLwGGaGkDiF vfsaa PRZN_SERSP : 367- 391: nvlkg GagNDvlfgGg-GADeLwGGaGkDiF vfsaa E 5: 43.1740 36( 18) L-x(1,2)-G-x(1,2)-G-[ADNS]-D-x-[IL]-x-[AG]-G-x-G-x-[DN]-x-[FIL]-x(2)-[ADGNSTV]-x(3)-[DN] Occurences: 36(18) APRA_PSEAE : 358- 383: dvanv LkgGa-GNDiLyGGlGaDqLwgGagaD tfvyg APRA_PSEAE : 358- 383: dvanv Lk-GgaGNDiLyGGlGaDqLwgGagaD tfvyg CYAA_BORPE : 1031- 1056: ahdnf LagGs-GDDrLdGGaGnDtLvgGegqN tvigg CYAA_BORPE : 1031- 1056: ahdnf La-GgsGDDrLdGGaGnDtLvgGegqN tvigg CYAA_BORPE : 1305- 1330: dgndm Ly-GdaGNDtLyGGlGdDtLegGagnD wfgqt CYAA_BORPE : 1419- 1444: aqanv Lr-GagGADvLaGGeGdDvLlgGdgdD qlsgd CYAA_BORPE : 1428- 1453: ggadv LagGe-GDDvLlGGdGdDqLsgDagrD rlyge CYAA_BORPE : 1428- 1453: ggadv La-GgeGDDvLlGGdGdDqLsgDagrD rlyge CYAA_BORPE : 1545- 1570: aganv Ln-GlaGNDvLsGGaGdDvLlgDegsD llsgd HLY1_ECOLI : 757- 782: dgndr Ly-GdkGNDtLsGGnGdDqLygGdgnD kligg HLY1_ECOLI : 766- 791: kgndt LsgGn-GDDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 766- 791: kgndt Ls-GgnGDDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 775- 800: ngddq LygGd-GNDkLiGGaGnNyLngGdgdD elqvq HLY1_ECOLI : 775- 800: ngddq Ly-GgdGNDkLiGGaGnNyLngGdgdD elqvq HLY1_ECOLI : 823- 848: kgndk Ly-GseGADlLdGGeGnDlLkgGygnD iyryl HLYA_ACTPL : 753- 778: dgddh LfgGa-GDDvIdGGnGnNfLvgGtgnD iisgg HLYA_ACTPL : 753- 778: dgddh Lf-GgaGDDvIdGGnGnNfLvgGtgnD iisgg HLYA_ACTSU : 753- 778: dgddh LfgGa-GDDvIdGGnGnNfLvgGtgnD iisgg HLYA_ACTSU : 753- 778: dgddh Lf-GgaGDDvIdGGnGnNfLvgGtgnD iisgg HLYA_ECOLI : 758- 783: dgndr Ly-GdkGNDtLsGGnGdDqLygGdgnD kligv HLYA_ECOLI : 767- 792: kgndt LsgGn-GDDqLyGGdGnDkLigVagnN ylngg HLYA_ECOLI : 767- 792: kgndt Ls-GgnGDDqLyGGdGnDkLigVagnN ylngg HLYA_ECOLI : 824- 849: kgndk Ly-GseGADlLdGGeGdDlLkgGygnD iyryl LIPA_PSEFL : 379- 405: sdgnd LiqGgkGADfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 379- 405: sdgnd LiqGgnGADfIeGGkGnDtIrdNsghN tflfs LKTA_ACTAC : 756- 781: dgddr Ly-GdnGNDeIhGGqGnDkLygGagnD rlfge LKTA_ACTAC : 792- 817: ygnny LdgGe-GDDhLeGGnGsDiLrgGsgnD klfgn LKTA_ACTAC : 792- 817: ygnny Ld-GgeGDDhLeGGnGsDiLrgGsgnD klfgn LKTA_ACTAC : 801- 826: egddh LegGn-GSDiLrGGsGnDkLfgNqgdD lldgg LKTA_ACTAC : 801- 826: egddh Le-GgnGSDiLrGGsGnDkLfgNqgdD lldgg LKTA_ACTAC : 819- 844: sgndk Lf-GnqGDDlLdGGeGdDqLagGegnD iyvyr LKTA_PASHA : 750- 775: dgndr LfgGk-GDDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 750- 775: dgndr Lf-GgkGDDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 759- 784: kgddi LdgGn-GDDfIdGGkGnDlLhgGkgdD ifvhr LKTA_PASHA : 759- 784: kgddi Ld-GgnGDDfIdGGkGnDlLhgGkgdD ifvhr NODO_RHILV : 102- 127: egddv LyaGp-GSDiLvAGdGaDvLtgGddgD afvfr PRTA_ERWCH : 354- 379: nadni LrgGa-GDDiLyGGgGaDrLygGsgrD tfvyt PRTA_ERWCH : 354- 379: nadni Lr-GgaGDDiLyGGgGaDrLygGsgrD tfvyt PRTA_ERWCH : 363- 388: agddi LygGg-GADrLyGGsGrDtFvyTavsD skvaa PRTA_ERWCH : 363- 388: agddi Ly-GggGADrLyGGsGrDtFvyTavsD skvaa PRTB_ERWCH : 372- 397: agddv Ly-GstGADtLtGGaGrDiFvyGsgqD stvsa PRTC_ERWCH : 361- 386: sadni LqgGa-GNDvLyGGaGaDtLygGagrD tfvyg PRTC_ERWCH : 361- 386: sadni Lq-GgaGNDvLyGGaGaDtLygGagrD tfvyg PRTC_ERWCH : 370- 395: agndv LygGa-GADtLyGGaGrDtFvyGsgqD stvaa PRTC_ERWCH : 370- 395: agndv Ly-GgaGADtLyGGaGrDtFvyGsgqD stvaa PRTG_ERWCH : 366- 391: agndv Ly-GdgGADiLtGGaGkDiFvyAwekD slssa PRTX_ERWCH : 360- 385: nadnt LrgGa-GDDvLfGGsGaDrLygGsgrD tfvyt PRTX_ERWCH : 360- 385: nadnt Lr-GgaGDDvLfGGsGaDrLygGsgrD tfvyt PRTX_ERWCH : 369- 394: agddv LfgGs-GADrLyGGsGrDtFvyTaasD skvaa PRTX_ERWCH : 369- 394: agddv Lf-GgsGADrLyGGsGrDtFvyTaasD skvaa PRZN_SERMA : 365- 390: aannv LkgGa-GNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERMA : 365- 390: aannv Lk-GgaGNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERMA : 374- 399: agndv LfgGg-GADeLwGGaGkDiFvfSaasD sapga PRZN_SERMA : 374- 399: agndv Lf-GggGADeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 364- 389: aannv LkgGa-GNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERSP : 364- 389: aannv Lk-GgaGNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERSP : 373- 398: agndv LfgGg-GADeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 373- 398: agndv Lf-GggGADeLwGGaGkDiFvfSaasD sapga F 6: 40.6523 32( 18) D-x(3,4)-G-x(1,2)-G-[AD]-D-x-[IL]-x-G-G-x-[DG]-x-D-x-[FIL] Occurences: 32(18) APRA_PSEAE : 365- 385: ggagn DilygGl-GADqLwGGaGaDtF vygdi APRA_PSEAE : 365- 385: ggagn Dily-GglGADqLwGGaGaDtF vygdi CYAA_BORPE : 1028- 1049: tgnah DnflaGgsGDDrLdGGaGnDtL vggeg CYAA_BORPE : 1161- 1181: ghdgn Dtir-GrgGDDiLrGGlGlDtL ygedg CYAA_BORPE : 1284- 1305: mgqgg DdtvrGgdGDDlLfGGdGnDmL ygdag CYAA_BORPE : 1285- 1305: gqggd DtvrgGd-GDDlLfGGdGnDmL ygdag CYAA_BORPE : 1285- 1305: gqggd Dtvr-GgdGDDlLfGGdGnDmL ygdag CYAA_BORPE : 1312- 1332: gdagn DtlygGl-GDDtLeGGaGnDwF gqtqa CYAA_BORPE : 1312- 1332: gdagn Dtly-GglGDDtLeGGaGnDwF gqtqa CYAA_BORPE : 1426- 1446: gagga DvlagGe-GDDvLlGGdGdDqL sgdag CYAA_BORPE : 1426- 1446: gagga Dvla-GgeGDDvLlGGdGdDqL sgdag HLY1_ECOLI : 764- 784: gdkgn DtlsgGn-GDDqLyGGdGnDkL iggag HLY1_ECOLI : 764- 784: gdkgn Dtls-GgnGDDqLyGGdGnDkL iggag HLY1_ECOLI : 821- 841: ggkgn Dkly-GseGADlLdGGeGnDlL kggyg HLYA_ACTPL : 742- 762: ggngv Dtid-GndGDDhLfGGaGdDvI dggng HLYA_ACTSU : 742- 762: ggngv Dtid-GndGDDhLfGGaGdDvI dggng HLYA_ECOLI : 765- 785: gdkgn DtlsgGn-GDDqLyGGdGnDkL igvag HLYA_ECOLI : 765- 785: gdkgn Dtls-GgnGDDqLyGGdGnDkL igvag HLYA_ECOLI : 822- 842: ggkgn Dkly-GseGADlLdGGeGdDlL kggyg LIPA_PSEFL : 378- 398: gsdgn DliqgGk-GADfIeGGkGnDtI rdnsg LIPA_PSEFL : 378- 398: gsdgn Dliq-GgkGADfIeGGkGnDtI rdnsg LIPB_PSEFL : 378- 398: gsdgn DliqgGn-GADfIeGGkGnDtI rdnsg LIPB_PSEFL : 378- 398: gsdgn Dliq-GgnGADfIeGGkGnDtI rdnsg LKTA_ACTAC : 817- 837: ggsgn Dklf-GnqGDDlLdGGeGdDqL aggeg LKTA_PASHA : 748- 768: gndgn DrlfgGk-GDDiLdGGnGdDfI dggkg LKTA_PASHA : 748- 768: gndgn Drlf-GgkGDDiLdGGnGdDfI dggkg LKTA_PASHA : 756- 777: fggkg DdildGgnGDDfIdGGkGnDlL hggkg LKTA_PASHA : 757- 777: ggkgd DildgGn-GDDfIdGGkGnDlL hggkg LKTA_PASHA : 757- 777: ggkgd Dild-GgnGDDfIdGGkGnDlL hggkg NODO_RHILV : 109- 129: agpgs DilvaGd-GADvLtGGdDgDaF vfrfh PRTA_ERWCH : 351- 372: ignna DnilrGgaGDDiLyGGgGaDrL yggsg PRTA_ERWCH : 360- 381: rggag DdilyGggGADrLyGGsGrDtF vytav PRTA_ERWCH : 361- 381: ggagd DilygGg-GADrLyGGsGrDtF vytav PRTA_ERWCH : 361- 381: ggagd Dily-GggGADrLyGGsGrDtF vytav PRTB_ERWCH : 369- 390: qggag DdvlyGstGADtLtGGaGrDiF vygsg PRTB_ERWCH : 370- 390: ggagd Dvly-GstGADtLtGGaGrDiF vygsg PRTC_ERWCH : 368- 388: ggagn DvlygGa-GADtLyGGaGrDtF vygsg PRTC_ERWCH : 368- 388: ggagn Dvly-GgaGADtLyGGaGrDtF vygsg PRTG_ERWCH : 364- 384: ggagn Dvly-GdgGADiLtGGaGkDiF vyawe PRTX_ERWCH : 357- 378: ignna DntlrGgaGDDvLfGGsGaDrL yggsg PRTX_ERWCH : 366- 387: rggag DdvlfGgsGADrLyGGsGrDtF vytaa PRTX_ERWCH : 367- 387: ggagd DvlfgGs-GADrLyGGsGrDtF vytaa PRTX_ERWCH : 367- 387: ggagd Dvlf-GgsGADrLyGGsGrDtF vytaa PRZN_SERMA : 372- 392: ggagn DvlfgGg-GADeLwGGaGkDiF vfsaa PRZN_SERMA : 372- 392: ggagn Dvlf-GggGADeLwGGaGkDiF vfsaa PRZN_SERSP : 371- 391: ggagn DvlfgGg-GADeLwGGaGkDiF vfsaa PRZN_SERSP : 371- 391: ggagn Dvlf-GggGADeLwGGaGkDiF vfsaa G 7: 40.6058 23( 18) G-x(2,3)-G-x(4,5)-G-[DGS]-x-[EG]-[AN]-D-x-[IL]-x-G-G-x(3)-D Occurences: 23(18) APRA_PSEAE : 360- 383: anvlk Gga-GndilyGGlGADqLwGGagaD tfvyg CYAA_BORPE : 1298- 1321: ddllf Ggd-GndmlyGDaGNDtLyGGlgdD tlegg CYAA_BORPE : 1565- 1588: ddvll Gde-GsdllsGDaGNDdLfGGqgdD tylfg HLY1_ECOLI : 750- 773: ddhie Gnd-GndrlyGDkGNDtLsGGngdD qlygg HLY1_ECOLI : 816- 839: knvls Ggk-GndklyGSeGADlLdGGegnD llkgg HLY1_ECOLI : 825- 848: ndkly Gse-GadlldGGeGNDlLkGGygnD iyryl HLYA_ACTPL : 764- 787: ddvid Ggn-GnnflvGGtGNDiIsGGkdnD iyvhk HLYA_ACTSU : 764- 787: ddvid Ggn-GnnflvGGtGNDiIsGGkdnD iyvhk HLYA_ECOLI : 751- 774: ddlie Gnd-GndrlyGDkGNDtLsGGngdD qlygg HLYA_ECOLI : 817- 840: knvlf Ggk-GndklyGSeGADlLdGGegdD llkgg LIPA_PSEFL : 373- 396: ntfii Gsd-GndliqGGkGADfIeGGkgnD tirdn LIPB_PSEFL : 373- 396: ntfii Gsd-GndliqGGnGADfIeGGkgnD tirdn LKTA_ACTAC : 749- 772: ddliy Gyd-GddrlyGDnGNDeIhGGqgnD klygg LKTA_ACTAC : 758- 781: ddrly Gdn-GndeihGGqGNDkLyGGagnD rlfge LKTA_PASHA : 761- 784: ddild Ggn-GddfidGGkGNDlLhGGkgdD ifvhr NODO_RHILV : 5- 28: mnik GsdnGsfik-GSpENDiIdGGkknD widag PRTA_ERWCH : 356- 379: dnilr Gga-GddilyGGgGADrLyGGsgrD tfvyt PRTB_ERWCH : 365- 388: dnilq Gga-GddvlyGStGADtLtGGagrD ifvyg PRTC_ERWCH : 363- 386: dnilq Gga-GndvlyGGaGADtLyGGagrD tfvyg PRTG_ERWCH : 359- 382: dnrid Gga-GndvlyGDgGADiLtGGagkD ifvya PRTX_ERWCH : 362- 385: dntlr Gga-GddvlfGGsGADrLyGGsgrD tfvyt PRZN_SERMA : 367- 390: nnvlk Gga-GndvlfGGgGADeLwGGagkD ifvfs PRZN_SERSP : 366- 389: nnvlk Gga-GndvlfGGgGADeLwGGagkD ifvfs H 8: 39.8051 30( 18) G-[DGS]-x(2)-[ADN]-D-x-[FIL]-x-[AG]-G-x-G-x(0,1)-D-x-[FIL]-x(2)-[ADGNSTV]-x(3)-D Occurences: 30(18) APRA_PSEAE : 360- 383: anvlk GGagNDiLyGGlGaDqLwgGagaD tfvyg CYAA_BORPE : 1289- 1312: ddtvr GGdgDDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1307- 1330: ndmly GDagNDtLyGGlGdDtLegGagnD wfgqt CYAA_BORPE : 1430- 1453: advla GGegDDvLlGGdGdDqLsgDagrD rlyge HLY1_ECOLI : 759- 782: ndrly GDkgNDtLsGGnGdDqLygGdgnD kligg HLY1_ECOLI : 825- 848: ndkly GSegADlLdGGeGnDlLkgGygnD iyryl HLYA_ACTPL : 728- 751: ndifk GSqfDDvFhGGnGvDtIdgNdgdD hlfgg HLYA_ACTSU : 728- 751: ndifk GSqfDDvFhGGnGvDtIdgNdgdD hlfgg HLYA_ECOLI : 760- 783: ndrly GDkgNDtLsGGnGdDqLygGdgnD kligv HLYA_ECOLI : 826- 849: ndkly GSegADlLdGGeGdDlLkgGygnD iyryl LIPA_PSEFL : 373- 396: ntfii GSdgNDlIqGGkGaDfIegGkgnD tirdn LIPB_PSEFL : 373- 396: ntfii GSdgNDlIqGGnGaDfIegGkgnD tirdn LKTA_ACTAC : 758- 781: ddrly GDngNDeIhGGqGnDkLygGagnD rlfge LKTA_ACTAC : 794- 817: nnyld GGegDDhLeGGnGsDiLrgGsgnD klfgn LKTA_PASHA : 725- 748: ndifk GSkfNDaFnGGdGvDtIdgNdgnD rlfgg LKTA_PASHA : 752- 775: ndrlf GGkgDDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 761- 784: ddild GGngDDfIdGGkGnDlLhgGkgdD ifvhr NODO_RHILV : 23- 46: ndiid GGkkNDwIdAGnGdDrIkaGdgqD sitag PRTA_ERWCH : 356- 379: dnilr GGagDDiLyGGgGaDrLygGsgrD tfvyt PRTA_ERWCH : 365- 388: ddily GGggADrLyGGsGrDtFvyTavsD skvaa PRTB_ERWCH : 374- 397: ddvly GStgADtLtGGaGrDiFvyGsgqD stvsa PRTC_ERWCH : 363- 386: dnilq GGagNDvLyGGaGaDtLygGagrD tfvyg PRTC_ERWCH : 372- 395: ndvly GGagADtLyGGaGrDtFvyGsgqD stvaa PRTG_ERWCH : 368- 391: ndvly GDggADiLtGGaGkDiFvyAwekD slssa PRTX_ERWCH : 362- 385: dntlr GGagDDvLfGGsGaDrLygGsgrD tfvyt PRTX_ERWCH : 371- 394: ddvlf GGsgADrLyGGsGrDtFvyTaasD skvaa PRZN_SERMA : 367- 390: nnvlk GGagNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERMA : 376- 399: ndvlf GGggADeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 366- 389: nnvlk GGagNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERSP : 375- 398: ndvlf GGggADeLwGGaGkDiFvfSaasD sapga I 9: 37.6001 29( 18) N-D-x-[FIL]-x-G-x(3,4)-D-x(4)-G-x(1,2)-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DEN] Occurences: 29(18) APRA_PSEAE : 364- 392: kggag NDiLyGglgaDqlwgGa-GaDtFvyGdiaE ssaaa CYAA_BORPE : 1019- 1047: iggag NDsItGnah-DnflaGgsGdDrLdgGagnD tlvgg CYAA_BORPE : 1160- 1188: wghdg NDtIrGrggdDilrgGl-GlDtLygEdgnD iflqd CYAA_BORPE : 1160- 1188: wghdg NDtIrGrgg-DdilrGglGlDtLygEdgnD iflqd CYAA_BORPE : 1302- 1330: fggdg NDmLyGdagnDtlygGl-GdDtLegGagnD wfgqt CYAA_BORPE : 1311- 1339: ygdag NDtLyGglgdDtlegGa-GnDwFgqTqarE hdvlr CYAA_BORPE : 1311- 1339: ygdag NDtLyGglg-DdtleGgaGnDwFgqTqarE hdvlr CYAA_BORPE : 1551- 1579: nglag NDvLsGgag-DdvllGdeGsDlLsgDagnD dlfgg HLY1_ECOLI : 754- 782: egndg NDrLyGdkgnDtlsgGn-GdDqLygGdgnD kligg HLY1_ECOLI : 763- 791: ygdkg NDtLsGgngdDqlygGd-GnDkLigGagnN ylngg HLY1_ECOLI : 763- 791: ygdkg NDtLsGgng-DdqlyGgdGnDkLigGagnN ylngg HLY1_ECOLI : 820- 848: sggkg NDkLyGsegaDlldgGe-GnDlLkgGygnD iyryl HLYA_ACTPL : 723- 751: igsqf NDiFkGsqfdDvfhgGn-GvDtIdgNdgdD hlfgg HLYA_ACTPL : 723- 751: igsqf NDiFkGsqf-DdvfhGgnGvDtIdgNdgdD hlfgg HLYA_ACTSU : 723- 751: igsqf NDiFkGsqfdDvfhgGn-GvDtIdgNdgdD hlfgg HLYA_ACTSU : 723- 751: igsqf NDiFkGsqf-DdvfhGgnGvDtIdgNdgdD hlfgg HLYA_ECOLI : 755- 783: egndg NDrLyGdkgnDtlsgGn-GdDqLygGdgnD kligv HLYA_ECOLI : 821- 849: fggkg NDkLyGsegaDlldgGe-GdDlLkgGygnD iyryl LIPA_PSEFL : 377- 405: igsdg NDlIqGgkgaDfiegGk-GnDtIrdNsghN tflfs LIPB_PSEFL : 377- 405: igsdg NDlIqGgngaDfiegGk-GnDtIrdNsghN tflfs LKTA_ACTAC : 735- 763: ygskf NDvFhGhdg-DdliyGydGdDrLygDngnD eihgg LKTA_ACTAC : 762- 790: ygdng NDeIhGgqgnDklygGa-GnDrLfgEygnN yldgg LKTA_ACTAC : 816- 844: rggsg NDkLfGnqgdDlldgGe-GdDqLagGegnD iyvyr LKTA_ACTAC : 816- 844: rggsg NDkLfGnqg-DdlldGgeGdDqLagGegnD iyvyr LKTA_PASHA : 720- 748: igtsh NDiFkGskfnDafngGd-GvDtIdgNdgnD rlfgg LKTA_PASHA : 747- 775: dgndg NDrLfGgkgdDildgGn-GdDfIdgGkgnD llhgg LKTA_PASHA : 747- 775: dgndg NDrLfGgkg-DdildGgnGdDfIdgGkgnD llhgg NODO_RHILV : 18- 46: kgspe NDiIdGgkknDwidaGn-GdDrIkaGdgqD sitag PRTA_ERWCH : 342- 370: iggsg NDlLiGnna-DnilrGgaGdDiLygGggaD rlygg PRTB_ERWCH : 351- 379: iggsg NDiLiGnga-DnilqGgaGdDvLygStgaD tltgg PRTC_ERWCH : 349- 377: iggsg NDiLvGnsa-DnilqGgaGnDvLygGagaD tlygg PRTC_ERWCH : 367- 395: qggag NDvLyGgagaDtlygGa-GrDtFvyGsgqD stvaa PRTG_ERWCH : 363- 391: dggag NDvLyGdggaDiltgGa-GkDiFvyAwekD slssa PRTX_ERWCH : 348- 376: iggsg NDlLiGnna-DntlrGgaGdDvLfgGsgaD rlygg PRZN_SERMA : 371- 399: kggag NDvLfGgggaDelwgGa-GkDiFvfSaasD sapga PRZN_SERSP : 370- 398: kggag NDvLfGgggaDelwgGa-GkDiFvfSaasD sapga J 10: 37.5620 32( 18) D-x(3,4)-G-x(2)-[ADGNS]-D-x(4)-G-x(1,2)-G-x-D-x-[FIL]-x(2)-[DGNST]-x-[AGIV]-x-[DEN]-x(4)-[AGST] Occurences: 32(18) APRA_PSEAE : 365- 397: ggagn DilygGlgADqlwgGa-GaDtFvyGdIaEssaaA pdtlr CYAA_BORPE : 1028- 1061: tgnah DnflaGgsGDdrldGgaGnDtLvgGeGqNtvigG agddv CYAA_BORPE : 1284- 1317: mgqgg DdtvrGgdGDdllfGgdGnDmLygDaGnDtlygG lgddt CYAA_BORPE : 1285- 1317: gqggd DtvrgGdgDDllfgGd-GnDmLygDaGnDtlygG lgddt CYAA_BORPE : 1285- 1317: gqggd Dtvr-GgdGDdllfGgdGnDmLygDaGnDtlygG lgddt CYAA_BORPE : 1552- 1584: glagn Dvls-GgaGDdvllGdeGsDlLsgDaGnDdlfgG qgddt HLY1_ECOLI : 737- 769: gskfa Difh-GadGDdhieGndGnDrLygDkGnDtlsgG ngddq HLY1_ECOLI : 764- 796: gdkgn DtlsgGngDDqlygGd-GnDkLigGaGnNylngG dgdde HLY1_ECOLI : 764- 796: gdkgn Dtls-GgnGDdqlyGgdGnDkLigGaGnNylngG dgdde HLYA_ACTPL : 742- 774: ggngv Dtid-GndGDdhlfGgaGdDvIdgGnGnNflvgG tgndi HLYA_ACTSU : 742- 774: ggngv Dtid-GndGDdhlfGgaGdDvIdgGnGnNflvgG tgndi HLYA_ECOLI : 738- 770: gskft Difh-GadGDdlieGndGnDrLygDkGnDtlsgG ngddq LIPA_PSEFL : 378- 410: gsdgn DliqgGkgADfiegGk-GnDtIrdNsGhNtflfS ghfgq LIPB_PSEFL : 378- 410: gsdgn DliqgGngADfiegGk-GnDtIrdNsGhNtflfS ghfgn LKTA_ACTAC : 736- 768: gskfn Dvfh-GhdGDdliyGydGdDrLygDnGnDeihgG qgndk LKTA_ACTAC : 744- 777: hghdg DdliyGydGDdrlyGdnGnDeIhgGqGnDklygG agndr LKTA_ACTAC : 745- 777: ghdgd Dliy-GydGDdrlyGdnGnDeIhgGqGnDklygG agndr LKTA_ACTAC : 799- 831: ggegd DhlegGngSDilrgGs-GnDkLfgNqGdDlldgG egddq LKTA_PASHA : 748- 780: gndgn DrlfgGkgDDildgGn-GdDfIdgGkGnDllhgG kgddi LKTA_PASHA : 748- 780: gndgn Drlf-GgkGDdildGgnGdDfIdgGkGnDllhgG kgddi NODO_RHILV : 19- 51: gspen DiidgGkkNDwidaGn-GdDrIkaGdGqDsitaG pghdi NODO_RHILV : 28- 60: ggkkn DwidaGngDDrikaGd-GqDsItaGpGhDivwaG kgsdv PRTA_ERWCH : 343- 375: ggsgn Dlli-GnnADnilrGgaGdDiLygGgGaDrlygG sgrdt PRTA_ERWCH : 351- 384: ignna DnilrGgaGDdilyGggGaDrLygGsGrDtfvyT avsds PRTA_ERWCH : 361- 393: ggagd DilygGggADrlygGs-GrDtFvyTaVsDskvaA pdwil PRTB_ERWCH : 352- 384: ggsgn Dili-GngADnilqGgaGdDvLygStGaDtltgG agrdi PRTB_ERWCH : 360- 393: ignga DnilqGgaGDdvlyGstGaDtLtgGaGrDifvyG sgqds PRTC_ERWCH : 350- 382: ggsgn Dilv-GnsADnilqGgaGnDvLygGaGaDtlygG agrdt PRTC_ERWCH : 368- 400: ggagn DvlygGagADtlygGa-GrDtFvyGsGqDstvaA ydwia PRTG_ERWCH : 346- 378: ggsgh Dviv-GnlSDnridGgaGnDvLygDgGaDiltgG agkdi PRTX_ERWCH : 349- 381: ggsgn Dlli-GnnADntlrGgaGdDvLfgGsGaDrlygG sgrdt PRTX_ERWCH : 357- 390: ignna DntlrGgaGDdvlfGgsGaDrLygGsGrDtfvyT aasds PRTX_ERWCH : 367- 399: ggagd DvlfgGsgADrlygGs-GrDtFvyTaAsDskvaA pdwll PRZN_SERMA : 372- 404: ggagn DvlfgGggADelwgGa-GkDiFvfSaAsDsapgA sdwir PRZN_SERSP : 371- 403: ggagn DvlfgGggADelwgGa-GkDiFvfSaAsDsapgA sdwir K 11: 37.3882 44( 18) L-x(1,2)-G-x(1,2)-G-[ADN]-D-x-[IL]-x-G-G-x-[DG]-x-D Occurences: 44(18) APRA_PSEAE : 358- 374: dvanv LkgGa-GNDiLyGGlGaD qlwgg APRA_PSEAE : 358- 374: dvanv Lk-GgaGNDiLyGGlGaD qlwgg APRA_PSEAE : 367- 383: agndi LygGl-GADqLwGGaGaD tfvyg APRA_PSEAE : 367- 383: agndi Ly-GglGADqLwGGaGaD tfvyg CYAA_BORPE : 1031- 1047: ahdnf LagGs-GDDrLdGGaGnD tlvgg CYAA_BORPE : 1031- 1047: ahdnf La-GgsGDDrLdGGaGnD tlvgg CYAA_BORPE : 1305- 1321: dgndm Ly-GdaGNDtLyGGlGdD tlegg CYAA_BORPE : 1314- 1330: agndt LygGl-GDDtLeGGaGnD wfgqt CYAA_BORPE : 1314- 1330: agndt Ly-GglGDDtLeGGaGnD wfgqt CYAA_BORPE : 1419- 1435: aqanv Lr-GagGADvLaGGeGdD vllgg CYAA_BORPE : 1428- 1444: ggadv LagGe-GDDvLlGGdGdD qlsgd CYAA_BORPE : 1428- 1444: ggadv La-GgeGDDvLlGGdGdD qlsgd CYAA_BORPE : 1545- 1561: aganv Ln-GlaGNDvLsGGaGdD vllgd CYAA_BORPE : 1571- 1588: degsd LlsGdaGNDdLfGGqGdD tylfg CYAA_BORPE : 1572- 1588: egsdl Ls-GdaGNDdLfGGqGdD tylfg HLY1_ECOLI : 757- 773: dgndr Ly-GdkGNDtLsGGnGdD qlygg HLY1_ECOLI : 766- 782: kgndt LsgGn-GDDqLyGGdGnD kligg HLY1_ECOLI : 766- 782: kgndt Ls-GgnGDDqLyGGdGnD kligg HLY1_ECOLI : 823- 839: kgndk Ly-GseGADlLdGGeGnD llkgg HLY1_ECOLI : 831- 848: segad LldGgeGNDlLkGGyGnD iyryl HLY1_ECOLI : 832- 848: egadl LdgGe-GNDlLkGGyGnD iyryl HLY1_ECOLI : 832- 848: egadl Ld-GgeGNDlLkGGyGnD iyryl HLYA_ACTPL : 771- 787: ngnnf LvgGt-GNDiIsGGkDnD iyvhk HLYA_ACTPL : 771- 787: ngnnf Lv-GgtGNDiIsGGkDnD iyvhk HLYA_ACTSU : 771- 787: ngnnf LvgGt-GNDiIsGGkDnD iyvhk HLYA_ACTSU : 771- 787: ngnnf Lv-GgtGNDiIsGGkDnD iyvhk HLYA_ECOLI : 758- 774: dgndr Ly-GdkGNDtLsGGnGdD qlygg HLYA_ECOLI : 767- 783: kgndt LsgGn-GDDqLyGGdGnD kligv HLYA_ECOLI : 767- 783: kgndt Ls-GgnGDDqLyGGdGnD kligv HLYA_ECOLI : 824- 840: kgndk Ly-GseGADlLdGGeGdD llkgg HLYA_ECOLI : 832- 849: segad LldGgeGDDlLkGGyGnD iyryl HLYA_ECOLI : 833- 849: egadl LdgGe-GDDlLkGGyGnD iyryl HLYA_ECOLI : 833- 849: egadl Ld-GgeGDDlLkGGyGnD iyryl LIPA_PSEFL : 379- 396: sdgnd LiqGgkGADfIeGGkGnD tirdn LIPB_PSEFL : 379- 396: sdgnd LiqGgnGADfIeGGkGnD tirdn LKTA_ACTAC : 756- 772: dgddr Ly-GdnGNDeIhGGqGnD klygg LKTA_ACTAC : 792- 808: ygnny LdgGe-GDDhLeGGnGsD ilrgg LKTA_ACTAC : 792- 808: ygnny Ld-GgeGDDhLeGGnGsD ilrgg LKTA_ACTAC : 819- 835: sgndk Lf-GnqGDDlLdGGeGdD qlagg LKTA_ACTAC : 827- 844: nqgdd LldGgeGDDqLaGGeGnD iyvyr LKTA_ACTAC : 828- 844: qgddl LdgGe-GDDqLaGGeGnD iyvyr LKTA_ACTAC : 828- 844: qgddl Ld-GgeGDDqLaGGeGnD iyvyr LKTA_PASHA : 750- 766: dgndr LfgGk-GDDiLdGGnGdD fidgg LKTA_PASHA : 750- 766: dgndr Lf-GgkGDDiLdGGnGdD fidgg LKTA_PASHA : 759- 775: kgddi LdgGn-GDDfIdGGkGnD llhgg LKTA_PASHA : 759- 775: kgddi Ld-GgnGDDfIdGGkGnD llhgg NODO_RHILV : 111- 127: pgsdi LvaGd-GADvLtGGdDgD afvfr PRTA_ERWCH : 354- 370: nadni LrgGa-GDDiLyGGgGaD rlygg PRTA_ERWCH : 354- 370: nadni Lr-GgaGDDiLyGGgGaD rlygg PRTA_ERWCH : 363- 379: agddi LygGg-GADrLyGGsGrD tfvyt PRTA_ERWCH : 363- 379: agddi Ly-GggGADrLyGGsGrD tfvyt PRTB_ERWCH : 372- 388: agddv Ly-GstGADtLtGGaGrD ifvyg PRTC_ERWCH : 361- 377: sadni LqgGa-GNDvLyGGaGaD tlygg PRTC_ERWCH : 361- 377: sadni Lq-GgaGNDvLyGGaGaD tlygg PRTC_ERWCH : 370- 386: agndv LygGa-GADtLyGGaGrD tfvyg PRTC_ERWCH : 370- 386: agndv Ly-GgaGADtLyGGaGrD tfvyg PRTG_ERWCH : 366- 382: agndv Ly-GdgGADiLtGGaGkD ifvya PRTX_ERWCH : 360- 376: nadnt LrgGa-GDDvLfGGsGaD rlygg PRTX_ERWCH : 360- 376: nadnt Lr-GgaGDDvLfGGsGaD rlygg PRTX_ERWCH : 369- 385: agddv LfgGs-GADrLyGGsGrD tfvyt PRTX_ERWCH : 369- 385: agddv Lf-GgsGADrLyGGsGrD tfvyt PRZN_SERMA : 365- 381: aannv LkgGa-GNDvLfGGgGaD elwgg PRZN_SERMA : 365- 381: aannv Lk-GgaGNDvLfGGgGaD elwgg PRZN_SERMA : 374- 390: agndv LfgGg-GADeLwGGaGkD ifvfs PRZN_SERMA : 374- 390: agndv Lf-GggGADeLwGGaGkD ifvfs PRZN_SERSP : 364- 380: aannv LkgGa-GNDvLfGGgGaD elwgg PRZN_SERSP : 364- 380: aannv Lk-GgaGNDvLfGGgGaD elwgg PRZN_SERSP : 373- 389: agndv LfgGg-GADeLwGGaGkD ifvfs PRZN_SERSP : 373- 389: agndv Lf-GggGADeLwGGaGkD ifvfs L 12: 37.2726 40( 18) G-[ADN]-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DN] Occurences: 40(18) APRA_PSEAE : 363- 383: lkgga GNDiLyGGlGaDqLwgGagaD tfvyg CYAA_BORPE : 1036- 1056: laggs GDDrLdGGaGnDtLvgGegqN tvigg CYAA_BORPE : 1168- 1188: irgrg GDDiLrGGlGlDtLygEdgnD iflqd CYAA_BORPE : 1292- 1312: vrggd GDDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1310- 1330: lygda GNDtLyGGlGdDtLegGagnD wfgqt CYAA_BORPE : 1424- 1444: lrgag GADvLaGGeGdDvLlgGdgdD qlsgd CYAA_BORPE : 1433- 1453: lagge GDDvLlGGdGdDqLsgDagrD rlyge CYAA_BORPE : 1550- 1570: lngla GNDvLsGGaGdDvLlgDegsD llsgd HLY1_ECOLI : 762- 782: lygdk GNDtLsGGnGdDqLygGdgnD kligg HLY1_ECOLI : 771- 791: lsggn GDDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 828- 848: lygse GADlLdGGeGnDlLkgGygnD iyryl HLYA_ACTPL : 749- 769: idgnd GDDhLfGGaGdDvIdgGngnN flvgg HLYA_ACTSU : 749- 769: idgnd GDDhLfGGaGdDvIdgGngnN flvgg HLYA_ECOLI : 763- 783: lygdk GNDtLsGGnGdDqLygGdgnD kligv HLYA_ECOLI : 829- 849: lygse GADlLdGGeGdDlLkgGygnD iyryl LIPA_PSEFL : 376- 396: iigsd GNDlIqGGkGaDfIegGkgnD tirdn LIPA_PSEFL : 385- 405: iqggk GADfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 376- 396: iigsd GNDlIqGGnGaDfIegGkgnD tirdn LIPB_PSEFL : 385- 405: iqggn GADfIeGGkGnDtIrdNsghN tflfs LKTA_ACTAC : 761- 781: lygdn GNDeIhGGqGnDkLygGagnD rlfge LKTA_ACTAC : 770- 790: ihggq GNDkLyGGaGnDrLfgEygnN yldgg LKTA_ACTAC : 797- 817: ldgge GDDhLeGGnGsDiLrgGsgnD klfgn LKTA_ACTAC : 824- 844: lfgnq GDDlLdGGeGdDqLagGegnD iyvyr LKTA_PASHA : 746- 766: idgnd GNDrLfGGkGdDiLdgGngdD fidgg LKTA_PASHA : 755- 775: lfggk GDDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 764- 784: ldggn GDDfIdGGkGnDlLhgGkgdD ifvhr NODO_RHILV : 35- 55: idagn GDDrIkAGdGqDsItaGpghD ivwag NODO_RHILV : 98- 118: phsge GDDvLyAGpGsDiLvaGdgaD vltgg PRTA_ERWCH : 359- 379: lrgga GDDiLyGGgGaDrLygGsgrD tfvyt PRTA_ERWCH : 368- 388: lyggg GADrLyGGsGrDtFvyTavsD skvaa PRTB_ERWCH : 377- 397: lygst GADtLtGGaGrDiFvyGsgqD stvsa PRTC_ERWCH : 366- 386: lqgga GNDvLyGGaGaDtLygGagrD tfvyg PRTC_ERWCH : 375- 395: lygga GADtLyGGaGrDtFvyGsgqD stvaa PRTG_ERWCH : 371- 391: lygdg GADiLtGGaGkDiFvyAwekD slssa PRTX_ERWCH : 365- 385: lrgga GDDvLfGGsGaDrLygGsgrD tfvyt PRTX_ERWCH : 374- 394: lfggs GADrLyGGsGrDtFvyTaasD skvaa PRZN_SERMA : 370- 390: lkgga GNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERMA : 379- 399: lfggg GADeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 369- 389: lkgga GNDvLfGGgGaDeLwgGagkD ifvfs PRZN_SERSP : 378- 398: lfggg GADeLwGGaGkDiFvfSaasD sapga M 13: 37.1873 43( 18) D-x(3,4)-G-x(3,4)-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DEN] Occurences: 43(18) APRA_PSEAE : 365- 392: ggagn DilygGlga-DqLwGGaGaDtFvyGdiaE ssaaa APRA_PSEAE : 365- 392: ggagn Dily-GglgaDqLwGGaGaDtFvyGdiaE ssaaa CYAA_BORPE : 1028- 1056: tgnah DnflaGgsgdDrLdGGaGnDtLvgGegqN tvigg CYAA_BORPE : 1161- 1188: ghdgn Dtir-GrggdDiLrGGlGlDtLygEdgnD iflqd CYAA_BORPE : 1284- 1312: mgqgg DdtvrGgdgdDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1285- 1312: gqggd DtvrgGdgd-DlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1285- 1312: gqggd Dtvr-GgdgdDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1303- 1330: ggdgn Dmly-GdagnDtLyGGlGdDtLegGagnD wfgqt CYAA_BORPE : 1312- 1339: gdagn DtlygGlgd-DtLeGGaGnDwFgqTqarE hdvlr CYAA_BORPE : 1312- 1339: gdagn Dtly-GglgdDtLeGGaGnDwFgqTqarE hdvlr CYAA_BORPE : 1426- 1453: gagga DvlagGegd-DvLlGGdGdDqLsgDagrD rlyge CYAA_BORPE : 1426- 1453: gagga Dvla-GgegdDvLlGGdGdDqLsgDagrD rlyge HLY1_ECOLI : 755- 782: gndgn Drly-GdkgnDtLsGGnGdDqLygGdgnD kligg HLY1_ECOLI : 764- 791: gdkgn DtlsgGngd-DqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 764- 791: gdkgn Dtls-GgngdDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 821- 848: ggkgn Dkly-GsegaDlLdGGeGnDlLkgGygnD iyryl HLYA_ACTPL : 742- 769: ggngv Dtid-GndgdDhLfGGaGdDvIdgGngnN flvgg HLYA_ACTSU : 742- 769: ggngv Dtid-GndgdDhLfGGaGdDvIdgGngnN flvgg HLYA_ECOLI : 756- 783: gndgn Drly-GdkgnDtLsGGnGdDqLygGdgnD kligv HLYA_ECOLI : 822- 849: ggkgn Dkly-GsegaDlLdGGeGdDlLkgGygnD iyryl LIPA_PSEFL : 378- 405: gsdgn DliqgGkga-DfIeGGkGnDtIrdNsghN tflfs LIPA_PSEFL : 378- 405: gsdgn Dliq-GgkgaDfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 378- 405: gsdgn DliqgGnga-DfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 378- 405: gsdgn Dliq-GgngaDfIeGGkGnDtIrdNsghN tflfs LKTA_ACTAC : 753- 781: ygydg DdrlyGdngnDeIhGGqGnDkLygGagnD rlfge LKTA_ACTAC : 754- 781: gydgd Drly-GdngnDeIhGGqGnDkLygGagnD rlfge LKTA_ACTAC : 763- 790: gdngn DeihgGqgn-DkLyGGaGnDrLfgEygnN yldgg LKTA_ACTAC : 763- 790: gdngn Deih-GgqgnDkLyGGaGnDrLfgEygnN yldgg LKTA_ACTAC : 798- 826: dggeg DdhleGgngsDiLrGGsGnDkLfgNqgdD lldgg LKTA_ACTAC : 799- 826: ggegd DhlegGngs-DiLrGGsGnDkLfgNqgdD lldgg LKTA_ACTAC : 799- 826: ggegd Dhle-GgngsDiLrGGsGnDkLfgNqgdD lldgg LKTA_ACTAC : 817- 844: ggsgn Dklf-GnqgdDlLdGGeGdDqLagGegnD iyvyr LKTA_PASHA : 739- 766: ggdgv Dtid-GndgnDrLfGGkGdDiLdgGngdD fidgg LKTA_PASHA : 748- 775: gndgn DrlfgGkgd-DiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 748- 775: gndgn Drlf-GgkgdDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 756- 784: fggkg DdildGgngdDfIdGGkGnDlLhgGkgdD ifvhr LKTA_PASHA : 757- 784: ggkgd DildgGngd-DfIdGGkGnDlLhgGkgdD ifvhr LKTA_PASHA : 757- 784: ggkgd Dild-GgngdDfIdGGkGnDlLhgGkgdD ifvhr NODO_RHILV : 19- 46: gspen DiidgGkkn-DwIdAGnGdDrIkaGdgqD sitag NODO_RHILV : 19- 46: gspen Diid-GgkknDwIdAGnGdDrIkaGdgqD sitag NODO_RHILV : 28- 55: ggkkn DwidaGngd-DrIkAGdGqDsItaGpghD ivwag NODO_RHILV : 100- 127: sgegd DvlyaGpgs-DiLvAGdGaDvLtgGddgD afvfr PRTA_ERWCH : 351- 379: ignna DnilrGgagdDiLyGGgGaDrLygGsgrD tfvyt PRTA_ERWCH : 360- 388: rggag DdilyGgggaDrLyGGsGrDtFvyTavsD skvaa PRTA_ERWCH : 361- 388: ggagd DilygGgga-DrLyGGsGrDtFvyTavsD skvaa PRTA_ERWCH : 361- 388: ggagd Dily-GgggaDrLyGGsGrDtFvyTavsD skvaa PRTB_ERWCH : 369- 397: qggag DdvlyGstgaDtLtGGaGrDiFvyGsgqD stvsa PRTB_ERWCH : 370- 397: ggagd Dvly-GstgaDtLtGGaGrDiFvyGsgqD stvsa PRTC_ERWCH : 358- 386: vgnsa DnilqGgagnDvLyGGaGaDtLygGagrD tfvyg PRTC_ERWCH : 368- 395: ggagn DvlygGaga-DtLyGGaGrDtFvyGsgqD stvaa PRTC_ERWCH : 368- 395: ggagn Dvly-GgagaDtLyGGaGrDtFvyGsgqD stvaa PRTG_ERWCH : 364- 391: ggagn Dvly-GdggaDiLtGGaGkDiFvyAwekD slssa PRTX_ERWCH : 357- 385: ignna DntlrGgagdDvLfGGsGaDrLygGsgrD tfvyt PRTX_ERWCH : 366- 394: rggag DdvlfGgsgaDrLyGGsGrDtFvyTaasD skvaa PRTX_ERWCH : 367- 394: ggagd DvlfgGsga-DrLyGGsGrDtFvyTaasD skvaa PRTX_ERWCH : 367- 394: ggagd Dvlf-GgsgaDrLyGGsGrDtFvyTaasD skvaa PRZN_SERMA : 372- 399: ggagn DvlfgGgga-DeLwGGaGkDiFvfSaasD sapga PRZN_SERMA : 372- 399: ggagn Dvlf-GgggaDeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 371- 398: ggagn DvlfgGgga-DeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 371- 398: ggagn Dvlf-GgggaDeLwGGaGkDiFvfSaasD sapga N 14: 36.9357 25( 18) G-x(4,5)-G-[DGS]-x-[EG]-[AN]-D-x-[IL]-x-G-G-x(3)-D Occurences: 25(18) APRA_PSEAE : 363- 383: lkgga GndilyGGlGADqLwGGagaD tfvyg CYAA_BORPE : 1301- 1321: lfggd GndmlyGDaGNDtLyGGlgdD tlegg CYAA_BORPE : 1568- 1588: llgde GsdllsGDaGNDdLfGGqgdD tylfg HLY1_ECOLI : 753- 773: iegnd GndrlyGDkGNDtLsGGngdD qlygg HLY1_ECOLI : 819- 839: lsggk GndklyGSeGADlLdGGegnD llkgg HLY1_ECOLI : 828- 848: lygse GadlldGGeGNDlLkGGygnD iyryl HLYA_ACTPL : 767- 787: idggn GnnflvGGtGNDiIsGGkdnD iyvhk HLYA_ACTSU : 767- 787: idggn GnnflvGGtGNDiIsGGkdnD iyvhk HLYA_ECOLI : 754- 774: iegnd GndrlyGDkGNDtLsGGngdD qlygg HLYA_ECOLI : 820- 840: lfggk GndklyGSeGADlLdGGegdD llkgg LIPA_PSEFL : 367- 387: aepht GntfiiGSdGNDlIqGGkgaD fiegg LIPA_PSEFL : 376- 396: iigsd GndliqGGkGADfIeGGkgnD tirdn LIPB_PSEFL : 367- 387: aephk GntfiiGSdGNDlIqGGngaD fiegg LIPB_PSEFL : 376- 396: iigsd GndliqGGnGADfIeGGkgnD tirdn LKTA_ACTAC : 752- 772: iygyd GddrlyGDnGNDeIhGGqgnD klygg LKTA_ACTAC : 761- 781: lygdn GndeihGGqGNDkLyGGagnD rlfge LKTA_PASHA : 764- 784: ldggn GddfidGGkGNDlLhGGkgdD ifvhr NODO_RHILV : 9- 28: kgsdn Gsfik-GSpENDiIdGGkknD widag PRTA_ERWCH : 359- 379: lrgga GddilyGGgGADrLyGGsgrD tfvyt PRTB_ERWCH : 368- 388: lqgga GddvlyGStGADtLtGGagrD ifvyg PRTC_ERWCH : 366- 386: lqgga GndvlyGGaGADtLyGGagrD tfvyg PRTG_ERWCH : 362- 382: idgga GndvlyGDgGADiLtGGagkD ifvya PRTX_ERWCH : 365- 385: lrgga GddvlfGGsGADrLyGGsgrD tfvyt PRZN_SERMA : 370- 390: lkgga GndvlfGGgGADeLwGGagkD ifvfs PRZN_SERSP : 369- 389: lkgga GndvlfGGgGADeLwGGagkD ifvfs O 15: 36.6873 34( 18) D-x(1,3)-G-x(3,4)-D-x-[IL]-x-[AG]-G-x-G-x-D-x-[FIL]-x(2)-[ADEGNST]-x(3)-[DEN] Occurences: 34(18) APRA_PSEAE : 365- 392: ggagn DilyGglgaDqLwGGaGaDtFvyGdiaE ssaaa CYAA_BORPE : 1161- 1188: ghdgn DtirGrggdDiLrGGlGlDtLygEdgnD iflqd CYAA_BORPE : 1285- 1312: gqggd DtvrGgdgdDlLfGGdGnDmLygDagnD tlygg CYAA_BORPE : 1303- 1330: ggdgn DmlyGdagnDtLyGGlGdDtLegGagnD wfgqt CYAA_BORPE : 1312- 1339: gdagn DtlyGglgdDtLeGGaGnDwFgqTqarE hdvlr CYAA_BORPE : 1426- 1453: gagga DvlaGgegdDvLlGGdGdDqLsgDagrD rlyge HLY1_ECOLI : 755- 782: gndgn DrlyGdkgnDtLsGGnGdDqLygGdgnD kligg HLY1_ECOLI : 764- 791: gdkgn DtlsGgngdDqLyGGdGnDkLigGagnN ylngg HLY1_ECOLI : 821- 848: ggkgn DklyGsegaDlLdGGeGnDlLkgGygnD iyryl HLYA_ACTPL : 742- 769: ggngv DtidGndgdDhLfGGaGdDvIdgGngnN flvgg HLYA_ACTSU : 742- 769: ggngv DtidGndgdDhLfGGaGdDvIdgGngnN flvgg HLYA_ECOLI : 756- 783: gndgn DrlyGdkgnDtLsGGnGdDqLygGdgnD kligv HLYA_ECOLI : 822- 849: ggkgn DklyGsegaDlLdGGeGdDlLkgGygnD iyryl LIPA_PSEFL : 378- 405: gsdgn DliqGgkgaDfIeGGkGnDtIrdNsghN tflfs LIPB_PSEFL : 378- 405: gsdgn DliqGgngaDfIeGGkGnDtIrdNsghN tflfs LKTA_ACTAC : 754- 781: gydgd DrlyGdngnDeIhGGqGnDkLygGagnD rlfge LKTA_ACTAC : 763- 790: gdngn DeihGgqgnDkLyGGaGnDrLfgEygnN yldgg LKTA_ACTAC : 793- 817: gnnyl Dg--Gegd-DhLeGGnGsDiLrgGsgnD klfgn LKTA_ACTAC : 799- 826: ggegd DhleGgngsDiLrGGsGnDkLfgNqgdD lldgg LKTA_ACTAC : 817- 844: ggsgn DklfGnqgdDlLdGGeGdDqLagGegnD iyvyr LKTA_PASHA : 739- 766: ggdgv DtidGndgnDrLfGGkGdDiLdgGngdD fidgg LKTA_PASHA : 748- 775: gndgn DrlfGgkgdDiLdGGnGdDfIdgGkgnD llhgg LKTA_PASHA : 757- 784: ggkgd DildGgngdDfIdGGkGnDlLhgGkgdD ifvhr LKTA_PASHA : 760- 784: gddil Dg--Gngd-DfIdGGkGnDlLhgGkgdD ifvhr NODO_RHILV : 19- 46: gspen DiidGgkknDwIdAGnGdDrIkaGdgqD sitag NODO_RHILV : 22- 46: endii Dg--Gkkn-DwIdAGnGdDrIkaGdgqD sitag NODO_RHILV : 31- 55: kndwi Da--Gngd-DrIkAGdGqDsItaGpghD ivwag PRTA_ERWCH : 361- 388: ggagd DilyGgggaDrLyGGsGrDtFvyTavsD skvaa PRTB_ERWCH : 370- 397: ggagd DvlyGstgaDtLtGGaGrDiFvyGsgqD stvsa PRTC_ERWCH : 368- 395: ggagn DvlyGgagaDtLyGGaGrDtFvyGsgqD stvaa PRTG_ERWCH : 364- 391: ggagn DvlyGdggaDiLtGGaGkDiFvyAwekD slssa PRTX_ERWCH : 367- 394: ggagd DvlfGgsgaDrLyGGsGrDtFvyTaasD skvaa PRZN_SERMA : 372- 399: ggagn DvlfGgggaDeLwGGaGkDiFvfSaasD sapga PRZN_SERSP : 371- 398: ggagn DvlfGgggaDeLwGGaGkDiFvfSaasD sapga P 16: 35.1033 31( 18) D-x(4,5)-G-x-G-[ADNV]-D-x-[IL]-x-G-x(0,2)-G-x-D-x(4)-[GNSTV] Occurences: 31(18) APRA_PSEAE : 365- 388: ggagn Dilyg-GlGADqLwGgaGaDtfvyG diaes CYAA_BORPE : 1028- 1052: tgnah DnflagGsGDDrLdGgaGnDtlvgG egqnt CYAA_BORPE : 1293- 1317: rggdg DdllfgGdGNDmLyGdaGnDtlygG lgddt CYAA_BORPE : 1294- 1317: ggdgd Dllfg-GdGNDmLyGdaGnDtlygG lgddt CYAA_BORPE : 1312- 1335: gdagn Dtlyg-GlGDDtLeGgaGnDwfgqT qareh HLY1_ECOLI : 764- 787: gdkgn Dtlsg-GnGDDqLyGgdGnDkligG agnny HLYA_ACTPL : 732- 756: kgsqf DdvfhgGnGVDtIdGndGdDhlfgG agddv HLYA_ACTPL : 733- 756: gsqfd Dvfhg-GnGVDtIdGndGdDhlfgG agddv HLYA_ACTSU : 732- 756: kgsqf DdvfhgGnGVDtIdGndGdDhlfgG agddv HLYA_ACTSU : 733- 756: gsqfd Dvfhg-GnGVDtIdGndGdDhlfgG agddv HLYA_ECOLI : 765- 788: gdkgn Dtlsg-GnGDDqLyGgdGnDkligV agnny LIPA_PSEFL : 378- 401: gsdgn Dliqg-GkGADfIeGgkGnDtirdN sghnt LIPB_PSEFL : 378- 401: gsdgn Dliqg-GnGADfIeGgkGnDtirdN sghnt LKTA_ACTAC : 808- 831: ggngs Dilrg-GsGNDkLfGnqGdDlldgG egddq LKTA_PASHA : 730- 753: gskfn Dafng-GdGVDtIdGndGnDrlfgG kgddi LKTA_PASHA : 748- 771: gndgn Drlfg-GkGDDiLdGgnGdDfidgG kgndl LKTA_PASHA : 756- 780: fggkg DdildgGnGDDfIdGgkGnDllhgG kgddi LKTA_PASHA : 757- 780: ggkgd Dildg-GnGDDfIdGgkGnDllhgG kgddi NODO_RHILV : 109- 130: agpgs Dilva-GdGADvLtG--GdDgdafV frfhd PRTA_ERWCH : 351- 375: ignna DnilrgGaGDDiLyGggGaDrlygG sgrdt PRTA_ERWCH : 360- 384: rggag DdilygGgGADrLyGgsGrDtfvyT avsds PRTA_ERWCH : 361- 384: ggagd Dilyg-GgGADrLyGgsGrDtfvyT avsds PRTB_ERWCH : 360- 384: ignga DnilqgGaGDDvLyGstGaDtltgG agrdi PRTC_ERWCH : 358- 382: vgnsa DnilqgGaGNDvLyGgaGaDtlygG agrdt PRTC_ERWCH : 368- 391: ggagn Dvlyg-GaGADtLyGgaGrDtfvyG sgqds PRTG_ERWCH : 354- 378: vgnls DnridgGaGNDvLyGdgGaDiltgG agkdi PRTX_ERWCH : 357- 381: ignna DntlrgGaGDDvLfGgsGaDrlygG sgrdt PRTX_ERWCH : 366- 390: rggag DdvlfgGsGADrLyGgsGrDtfvyT aasds PRTX_ERWCH : 367- 390: ggagd Dvlfg-GsGADrLyGgsGrDtfvyT aasds PRZN_SERMA : 372- 395: ggagn Dvlfg-GgGADeLwGgaGkDifvfS aasds PRZN_SERSP : 371- 394: ggagn Dvlfg-GgGADeLwGgaGkDifvfS aasds Q 17: 33.1290 28( 18) G-[DGNS]-x(2)-N-D-x-[FIL]-x-G-x(3,4)-D-x(4)-G-x(1,2)-G Occurences: 28(18) APRA_PSEAE : 360- 381: anvlk GGagNDiLyGglgaDqlwgGa-G adtfv CYAA_BORPE : 1015- 1036: vqhii GGagNDsItGnah-DnflaGgsG ddrld CYAA_BORPE : 1138- 1159: ienlh GSrlNDrIaGddq-DnelwGhdG ndtir CYAA_BORPE : 1298- 1319: ddllf GGdgNDmLyGdagnDtlygGl-G ddtle CYAA_BORPE : 1307- 1328: ndmly GDagNDtLyGglgdDtlegGa-G ndwfg CYAA_BORPE : 1307- 1328: ndmly GDagNDtLyGglg-DdtleGgaG ndwfg HLY1_ECOLI : 750- 771: ddhie GNdgNDrLyGdkgnDtlsgGn-G ddqly HLY1_ECOLI : 759- 780: ndrly GDkgNDtLsGgngdDqlygGd-G ndkli HLY1_ECOLI : 759- 780: ndrly GDkgNDtLsGgng-DdqlyGgdG ndkli HLY1_ECOLI : 816- 837: knvls GGkgNDkLyGsegaDlldgGe-G ndllk HLYA_ACTPL : 719- 740: veeii GSqfNDiFkGsqfdDvfhgGn-G vdtid HLYA_ACTPL : 719- 740: veeii GSqfNDiFkGsqf-DdvfhGgnG vdtid HLYA_ACTSU : 719- 740: veeii GSqfNDiFkGsqfdDvfhgGn-G vdtid HLYA_ACTSU : 719- 740: veeii GSqfNDiFkGsqf-DdvfhGgnG vdtid HLYA_ECOLI : 751- 772: ddlie GNdgNDrLyGdkgnDtlsgGn-G ddqly HLYA_ECOLI : 760- 781: ndrly GDkgNDtLsGgngdDqlygGd-G ndkli HLYA_ECOLI : 760- 781: ndrly GDkgNDtLsGgng-DdqlyGgdG ndkli HLYA_ECOLI : 817- 838: knvlf GGkgNDkLyGsegaDlldgGe-G ddllk LIPA_PSEFL : 373- 394: ntfii GSdgNDlIqGgkgaDfiegGk-G ndtir LIPB_PSEFL : 373- 394: ntfii GSdgNDlIqGgngaDfiegGk-G ndtir LKTA_ACTAC : 731- 752: rdkfy GSkfNDvFhGhdg-DdliyGydG ddrly LKTA_ACTAC : 758- 779: ddrly GDngNDeIhGgqgnDklygGa-G ndrlf LKTA_ACTAC : 812- 833: sdilr GGsgNDkLfGnqgdDlldgGe-G ddqla LKTA_ACTAC : 812- 833: sdilr GGsgNDkLfGnqg-DdlldGgeG ddqla LKTA_PASHA : 743- 764: vdtid GNdgNDrLfGgkgdDildgGn-G ddfid LKTA_PASHA : 743- 764: vdtid GNdgNDrLfGgkg-DdildGgnG ddfid NODO_RHILV : 14- 35: gsfik GSpeNDiIdGgkknDwidaGn-G ddrik PRTA_ERWCH : 338- 359: ienai GGsgNDlLiGnna-DnilrGgaG ddily PRTB_ERWCH : 347- 368: ienai GGsgNDiLiGnga-DnilqGgaG ddvly PRTC_ERWCH : 345- 366: ienai GGsgNDiLvGnsa-DnilqGgaG ndvly PRTC_ERWCH : 363- 384: dnilq GGagNDvLyGgagaDtlygGa-G rdtfv PRTG_ERWCH : 359- 380: dnrid GGagNDvLyGdggaDiltgGa-G kdifv PRTX_ERWCH : 344- 365: ienai GGsgNDlLiGnna-DntlrGgaG ddvlf PRZN_SERMA : 367- 388: nnvlk GGagNDvLfGgggaDelwgGa-G kdifv PRZN_SERSP : 366- 387: nnvlk GGagNDvLfGgggaDelwgGa-G kdifv R 18: 31.3700 27( 18) G-x-G-[ADN]-D-x-[IL]-x-G-x(0,1)-G-x(1,3)-D-x(4)-[GNSTV] Occurences: 27(18) APRA_PSEAE : 361- 379: nvlkg GaGNDiLyG-GlgaDqlwgG agadt APRA_PSEAE : 370- 388: dilyg GlGADqLwG-GagaDtfvyG diaes CYAA_BORPE : 1034- 1052: nflag GsGDDrLdG-GagnDtlvgG egqnt CYAA_BORPE : 1317- 1335: dtlyg GlGDDtLeG-GagnDwfgqT qareh CYAA_BORPE : 1431- 1448: dvlag GeGDDvLlG-Gdg-DdqlsG dagrd HLY1_ECOLI : 769- 787: dtlsg GnGDDqLyG-GdgnDkligG agnny HLYA_ACTPL : 774- 790: nflvg GtGNDiIsG-Gk--DndiyV hktgd HLYA_ACTSU : 774- 790: nflvg GtGNDiIsG-Gk--DndiyV hktgd HLYA_ECOLI : 770- 788: dtlsg GnGDDqLyG-GdgnDkligV agnny LIPA_PSEFL : 383- 401: dliqg GkGADfIeG-GkgnDtirdN sghnt LIPB_PSEFL : 383- 401: dliqg GnGADfIeG-GkgnDtirdN sghnt LKTA_ACTAC : 795- 813: nyldg GeGDDhLeG-GngsDilrgG sgndk LKTA_PASHA : 753- 770: drlfg GkGDDiLdG-Gng-DdfidG gkgnd LKTA_PASHA : 753- 771: drlfg GkGDDiLdG-GngdDfidgG kgndl LKTA_PASHA : 762- 780: dildg GnGDDfIdG-GkgnDllhgG kgddi NODO_RHILV : 114- 130: dilva GdGADvLtG-Gd--DgdafV frfhd PRTA_ERWCH : 357- 375: nilrg GaGDDiLyGgGga-DrlygG sgrdt PRTA_ERWCH : 357- 375: nilrg GaGDDiLyG-GggaDrlygG sgrdt PRTA_ERWCH : 366- 384: dilyg GgGADrLyG-GsgrDtfvyT avsds PRTB_ERWCH : 348- 365: enaig GsGNDiLiGnGa--DnilqG gagdd PRTC_ERWCH : 364- 382: nilqg GaGNDvLyG-GagaDtlygG agrdt PRTC_ERWCH : 373- 391: dvlyg GaGADtLyG-GagrDtfvyG sgqds PRTG_ERWCH : 360- 378: nridg GaGNDvLyGdGga-DiltgG agkdi PRTX_ERWCH : 363- 381: ntlrg GaGDDvLfG-GsgaDrlygG sgrdt PRTX_ERWCH : 372- 390: dvlfg GsGADrLyG-GsgrDtfvyT aasds PRZN_SERMA : 368- 386: nvlkg GaGNDvLfGgGga-DelwgG agkdi PRZN_SERMA : 368- 386: nvlkg GaGNDvLfG-GggaDelwgG agkdi PRZN_SERMA : 377- 395: dvlfg GgGADeLwG-GagkDifvfS aasds PRZN_SERSP : 367- 385: nvlkg GaGNDvLfGgGga-DelwgG agkdi PRZN_SERSP : 367- 385: nvlkg GaGNDvLfG-GggaDelwgG agkdi PRZN_SERSP : 376- 394: dvlfg GgGADeLwG-GagkDifvfS aasds S 19: 31.0240 29( 18) G-x(3,4)-D-[ILV]-[FIL]-x(2)-G-x-G-x-D-x(4)-[AGN]-x-[DEG] Occurences: 29(18) APRA_PSEAE : 360- 381: anvlk GgagnDILygGlGaDqlwgGaG adtfv APRA_PSEAE : 361- 381: nvlkg Gagn-DILygGlGaDqlwgGaG adtfv CYAA_BORPE : 1421- 1442: anvlr GaggaDVLagGeGdDvllgGdG ddqls HLY1_ECOLI : 825- 846: ndkly GsegaDLLdgGeGnDllkgGyG ndiyr HLYA_ACTPL : 728- 749: ndifk GsqfdDVFhgGnGvDtidgNdG ddhlf HLYA_ACTSU : 728- 749: ndifk GsqfdDVFhgGnGvDtidgNdG ddhlf HLYA_ECOLI : 826- 847: ndkly GsegaDLLdgGeGdDllkgGyG ndiyr LIPA_PSEFL : 373- 394: ntfii GsdgnDLIqgGkGaDfiegGkG ndtir LIPB_PSEFL : 373- 394: ntfii GsdgnDLIqgGnGaDfiegGkG ndtir LKTA_ACTAC : 803- 824: ddhle GgngsDILrgGsGnDklfgNqG ddlld LKTA_ACTAC : 804- 824: dhleg Gngs-DILrgGsGnDklfgNqG ddlld LKTA_ACTAC : 821- 842: ndklf GnqgdDLLdgGeGdDqlagGeG ndiyv LKTA_PASHA : 752- 773: ndrlf GgkgdDILdgGnGdDfidgGkG ndllh LKTA_PASHA : 753- 773: drlfg Gkgd-DILdgGnGdDfidgGkG ndllh NODO_RHILV : 96- 116: viphs Gegd-DVLyaGpGsDilvaGdG advlt NODO_RHILV : 105- 125: dvlya Gpgs-DILvaGdGaDvltgGdD gdafv PRTA_ERWCH : 356- 377: dnilr GgagdDILygGgGaDrlygGsG rdtfv PRTA_ERWCH : 357- 377: nilrg Gagd-DILygGgGaDrlygGsG rdtfv PRTB_ERWCH : 383- 404: adtlt GgagrDIFvyGsGqDstvsAyD witdf PRTB_ERWCH : 384- 404: dtltg Gagr-DIFvyGsGqDstvsAyD witdf PRTC_ERWCH : 363- 384: dnilq GgagnDVLygGaGaDtlygGaG rdtfv PRTC_ERWCH : 364- 384: nilqg Gagn-DVLygGaGaDtlygGaG rdtfv PRTG_ERWCH : 368- 389: ndvly GdggaDILtgGaGkDifvyAwE kdsls PRTX_ERWCH : 362- 383: dntlr GgagdDVLfgGsGaDrlygGsG rdtfv PRTX_ERWCH : 363- 383: ntlrg Gagd-DVLfgGsGaDrlygGsG rdtfv PRZN_SERMA : 367- 388: nnvlk GgagnDVLfgGgGaDelwgGaG kdifv PRZN_SERMA : 368- 388: nvlkg Gagn-DVLfgGgGaDelwgGaG kdifv PRZN_SERSP : 366- 387: nnvlk GgagnDVLfgGgGaDelwgGaG kdifv PRZN_SERSP : 367- 387: nvlkg Gagn-DVLfgGgGaDelwgGaG kdifv T 20: 29.0416 44( 18) D-x(4,5)-G-x-G-[ADNV]-D-x-[IL]-x-G-x(0,2)-G Occurences: 44(18) APRA_PSEAE : 365- 381: ggagn Dilyg-GlGADqLwGgaG adtfv CYAA_BORPE : 1028- 1045: tgnah DnflagGsGDDrLdGgaG ndtlv CYAA_BORPE : 1284- 1301: mgqgg DdtvrgGdGDDlLfGgdG ndmly CYAA_BORPE : 1285- 1301: gqggd Dtvrg-GdGDDlLfGgdG ndmly CYAA_BORPE : 1293- 1310: rggdg DdllfgGdGNDmLyGdaG ndtly CYAA_BORPE : 1294- 1310: ggdgd Dllfg-GdGNDmLyGdaG ndtly CYAA_BORPE : 1312- 1328: gdagn Dtlyg-GlGDDtLeGgaG ndwfg CYAA_BORPE : 1426- 1442: gagga Dvlag-GeGDDvLlGgdG ddqls CYAA_BORPE : 1434- 1451: aggeg DdvllgGdGDDqLsGdaG rdrly CYAA_BORPE : 1435- 1451: ggegd Dvllg-GdGDDqLsGdaG rdrly CYAA_BORPE : 1552- 1568: glagn Dvlsg-GaGDDvLlGdeG sdlls HLY1_ECOLI : 764- 780: gdkgn Dtlsg-GnGDDqLyGgdG ndkli HLY1_ECOLI : 830- 846: gsega Dlldg-GeGNDlLkGgyG ndiyr HLYA_ACTPL : 732- 749: kgsqf DdvfhgGnGVDtIdGndG ddhlf HLYA_ACTPL : 733- 749: gsqfd Dvfhg-GnGVDtIdGndG ddhlf HLYA_ACTSU : 732- 749: kgsqf DdvfhgGnGVDtIdGndG ddhlf HLYA_ACTSU : 733- 749: gsqfd Dvfhg-GnGVDtIdGndG ddhlf HLYA_ECOLI : 765- 781: gdkgn Dtlsg-GnGDDqLyGgdG ndkli HLYA_ECOLI : 831- 847: gsega Dlldg-GeGDDlLkGgyG ndiyr LIPA_PSEFL : 378- 394: gsdgn Dliqg-GkGADfIeGgkG ndtir LIPB_PSEFL : 378- 394: gsdgn Dliqg-GnGADfIeGgkG ndtir LKTA_ACTAC : 763- 779: gdngn Deihg-GqGNDkLyGgaG ndrlf LKTA_ACTAC : 808- 824: ggngs Dilrg-GsGNDkLfGnqG ddlld LKTA_ACTAC : 825- 842: fgnqg DdlldgGeGDDqLaGgeG ndiyv LKTA_ACTAC : 826- 842: gnqgd Dlldg-GeGDDqLaGgeG ndiyv LKTA_PASHA : 730- 746: gskfn Dafng-GdGVDtIdGndG ndrlf LKTA_PASHA : 748- 764: gndgn Drlfg-GkGDDiLdGgnG ddfid LKTA_PASHA : 756- 773: fggkg DdildgGnGDDfIdGgkG ndllh LKTA_PASHA : 757- 773: ggkgd Dildg-GnGDDfIdGgkG ndllh LKTA_PASHA : 765- 782: dggng DdfidgGkGNDlLhGgkG ddifv LKTA_PASHA : 766- 782: ggngd Dfidg-GkGNDlLhGgkG ddifv NODO_RHILV : 109- 123: agpgs Dilva-GdGADvLtG--G ddgda PRTA_ERWCH : 351- 368: ignna DnilrgGaGDDiLyGggG adrly PRTA_ERWCH : 360- 377: rggag DdilygGgGADrLyGgsG rdtfv PRTA_ERWCH : 361- 377: ggagd Dilyg-GgGADrLyGgsG rdtfv PRTB_ERWCH : 360- 377: ignga DnilqgGaGDDvLyGstG adtlt PRTC_ERWCH : 358- 375: vgnsa DnilqgGaGNDvLyGgaG adtly PRTC_ERWCH : 368- 384: ggagn Dvlyg-GaGADtLyGgaG rdtfv PRTG_ERWCH : 354- 371: vgnls DnridgGaGNDvLyGdgG adilt PRTX_ERWCH : 357- 374: ignna DntlrgGaGDDvLfGgsG adrly PRTX_ERWCH : 366- 383: rggag DdvlfgGsGADrLyGgsG rdtfv PRTX_ERWCH : 367- 383: ggagd Dvlfg-GsGADrLyGgsG rdtfv PRZN_SERMA : 372- 388: ggagn Dvlfg-GgGADeLwGgaG kdifv PRZN_SERSP : 371- 387: ggagn Dvlfg-GgGADeLwGgaG kdifv Number of patterns evaluated by Pratt:9809 Total running time: 21 seconds