------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 10 sequences from file G_PROTEIN_RECEP_F3_3 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 10 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename G_PROTEIN_RECEP_F3_3.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CASR_BOVIN 1085 CASR_HUMAN 1078 MGR1_RAT 1199 MGR2_RAT 872 MGR3_RAT 879 MGR4_RAT 912 MGR5_HUMAN 1212 MGR5_RAT 1203 MGR6_RAT 871 MGR7_RAT 915 Pratt run started at Thu Feb 6 19:50:19 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 79.2310 10( 10) Y-x(3)-L-x(3)-C-x(3)-A-x-K-x-R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 2: 78.2310 10( 10) Y-x(2,3)-L-x(3,4)-C-x(3)-A-x-K-x-R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 3: 74.0609 12( 10) L-x(1,3)-C-x(3)-A-x-K-x-R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 4: 70.8909 10( 10) C-x(3)-A-x-K-x-R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 5: 66.7208 10( 10) A-x-K-x-R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 6: 62.5508 10( 10) K-x-R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 7: 58.3807 10( 10) R-x(2)-P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 8: 54.2107 10( 10) P-x(2)-F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 9: 50.0406 10( 10) F-N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 10: 50.0406 10( 10) V-x-G-x(3)-S-x(5)-V-x-N-x-L-x-L-F-x-I-P-Q-x(2)-Y 11: 50.0406 10( 10) N-x(4)-L-L-P-x(3)-L-G-x(4)-D-x-C-x(5)-A-L-E-x(4)-F 12: 49.5406 13( 10) V-x(0,1)-G-x(3)-S-x(5)-V-x-N-x-L-x-L-F-x-I-P-Q-x(2)-Y 13: 49.0406 15( 10) V-x(1,3)-G-x(3)-S-x(5)-V-x-N-x-L-x-L-F-x-I-P-Q-x(2)-Y 14: 48.5406 10( 10) F-x(0,1)-R-x(2)-P-x-D-x(2)-Q-A-x-A-M-x(2)-I-x(5)-W-x(2)-V-x(1,3)-A 15: 48.5406 13( 10) F-x(1,2)-R-x(2)-P-x-D-x(2)-Q-A-x-A-M-x(2)-I-x(5)-W-x(2)-V-x(1,3)-A 16: 48.0406 13( 10) F-x(0,2)-R-x(2)-P-x-D-x(2)-Q-A-x-A-M-x(2)-I-x(5)-W-x(2)-V-x(1,3)-A 17: 45.8706 10( 10) N-E-A-K-x-I-x-F-x-M-x(4)-I-x-W-x(2)-F-x-P 18: 45.8706 10( 10) L-L-P-x(3)-L-G-x(4)-D-x-C-x(5)-A-L-E-x(4)-F 19: 44.8706 10( 10) R-x(2)-P-x-D-x(2)-Q-A-x-A-M-x(2)-I-x(5)-W-x(2)-V-x(1,3)-A 20: 43.8706 21( 10) S-x(0,2)-S-x(2,4)-V-x-N-x-L-x-L-F-x-I-P-Q-x(2)-Y Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 130.3824 10( 10) Y-[DNST]-x-[LV]-L-x(3)-C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] B 2: 120.9633 10( 10) V-x-G-x(3)-S-[DGS]-[IV]-[AS]-x(2)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV]-P C 3: 120.8895 21( 10) S-x(0,2)-S-x(2,4)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A D 4: 120.8224 10( 10) Y-x(2,3)-L-x(3,4)-C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV] E 5: 120.4633 13( 10) V-x(0,1)-G-x(3)-S-[DGS]-[IV]-[AS]-x(2)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV]-P F 6: 119.8278 12( 10) L-x(1,3)-C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] G 7: 116.6577 10( 10) C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] H 8: 115.7933 15( 10) V-x(1,3)-G-x(3)-S-[DGS]-[IV]-[AS]-x(2)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV] I 9: 109.3032 10( 10) A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] J 10: 101.9620 10( 10) K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] K 11: 95.1876 10( 10) R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] L 12: 94.9431 10( 10) F-x(0,1)-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] M 13: 94.9431 13( 10) F-x(1,2)-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] N 14: 94.4431 13( 10) F-x(0,2)-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] O 15: 93.6250 10( 10) N-x-[DS]-[NP]-x-L-L-P-[GN]-[ILMV]-x-L-G-x-[EHR]-[IL]-x-D-[ST]-C-x(2)-[DSV]-[AST]-x-A-L-E-[AQ]-[AST]-[IL]-[DEST]-F-[IV]-x-[ADQ] P 16: 91.2731 10( 10) R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] Q 17: 91.0176 10( 10) P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] R 18: 83.0781 10( 10) L-L-P-[GN]-[ILMV]-x-L-G-x-[EHR]-[IL]-x-D-[ST]-C-x(2)-[DSV]-[AST]-x-A-L-E-[AQ]-[AST]-[IL]-[DEST]-F-[IV]-x-[ADQ] S 19: 80.4278 10( 10) F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] T 20: 76.2578 10( 10) N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 130.3824 10( 10) Y-[DNST]-x-[LV]-L-x(3)-C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 780- 829: gflig YTcLLaaiCffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 779- 828: gflig YTcLLaaiCffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 759- 808: vapvg YNgLLimsCtyYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 734- 783: lgsla YNvLLialCtlYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 743- 792: lislt YDvVLvilCtvYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 759- 808: icllg YSmLLmvtCtvYAIKTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 746- 795: vtplg YNgLLilsCtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 745- 794: vtplg YNgLLilsCtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 751- 800: igclg YSlLLmvtCtvYAIKARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 762- 811: icslg YSiLLmvtCtvYAIKTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae B 2: 120.9633 10( 10) V-x-G-x(3)-S-[DGS]-[IV]-[AS]-x(2)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV]-P Occurences: 10(10) CASR_BOVIN : 142- 189: pstia VvGatgSGIStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIP ndehq CASR_HUMAN : 141- 188: pstia VvGatgSGVStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIP ndehq MGR1_RAT : 159- 206: kpiag ViGpgsSSVAiqVQNLLqLFdIPQIAYSATSidLSDktlYKyFlRVVP sdtlq MGR2_RAT : 139- 186: tavtg ViGgsySDVSiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTVP pdffq MGR3_RAT : 145- 192: lliag ViGgsySSVSiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTVP pdfyq MGR4_RAT : 153- 200: ervvg ViGasgSSVSimVANILrLFkIPQISYASTApdLSDnsrYDfFsRVVP sdtyq MGR5_HUMAN : 146- 193: kpivg ViGpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVP sdaqq MGR5_RAT : 145- 192: kpivg ViGpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVP sdaqq MGR6_RAT : 142- 189: ervva VvGasaSSVSimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVVP pdsyq MGR7_RAT : 153- 200: ekvvg ViGasgSSVSimVANILrLFqIPQISYASTApeLSDdrrYDfFsRVVP pdsfq C 3: 120.8895 21( 10) S-x(0,2)-S-x(2,4)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A Occurences: 21(10) CASR_BOVIN : 148- 195: vgatg SgiSta--VANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIPNDehQA tamad CASR_HUMAN : 147- 194: vgatg SgvSta--VANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIPNDehQA tamad MGR1_RAT : 164- 212: vigpg Ss-SvaiqVQNLLqLFdIPQIAYSATSidLSDktlYKyFlRVVPSDtlQA ramld MGR1_RAT : 165- 212: igpgs S--SvaiqVQNLLqLFdIPQIAYSATSidLSDktlYKyFlRVVPSDtlQA ramld MGR2_RAT : 145- 192: iggsy SdvSiq--VANLLrLFqIPQISYASTSakLSDksrYDyFaRTVPPDffQA kamae MGR3_RAT : 149- 198: gvigg SysSvsiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTVPPDfyQA kamae MGR3_RAT : 151- 198: iggsy SsvSiq--VANLLrLFqIPQISYASTSakLSDksrYDyFaRTVPPDfyQA kamae MGR3_RAT : 151- 198: iggsy S--SvsiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTVPPDfyQA kamae MGR3_RAT : 152- 198: ggsys Sv-Siq--VANLLrLFqIPQISYASTSakLSDksrYDyFaRTVPPDfyQA kamae MGR4_RAT : 157- 206: gviga SgsSvsimVANILrLFkIPQISYASTApdLSDnsrYDfFsRVVPSDtyQA qamvd MGR4_RAT : 159- 206: igasg SsvSim--VANILrLFkIPQISYASTApdLSDnsrYDfFsRVVPSDtyQA qamvd MGR4_RAT : 159- 206: igasg S--SvsimVANILrLFkIPQISYASTApdLSDnsrYDfFsRVVPSDtyQA qamvd MGR4_RAT : 160- 206: gasgs Sv-Sim--VANILrLFkIPQISYASTApdLSDnsrYDfFsRVVPSDtyQA qamvd MGR5_HUMAN : 151- 199: vigpg Ss-SvaiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVPSDaqQA ramvd MGR5_HUMAN : 152- 199: igpgs S--SvaiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVPSDaqQA ramvd MGR5_RAT : 150- 198: vigpg Ss-SvaiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVPSDaqQA ramvd MGR5_RAT : 151- 198: igpgs S--SvaiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVPSDaqQA ramvd MGR6_RAT : 146- 195: avvga SasSvsimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVVPPDsyQA qamvd MGR6_RAT : 148- 195: vgasa SsvSim--VANVLrLFaIPQISYASTApeLSDstrYDfFsRVVPPDsyQA qamvd MGR6_RAT : 148- 195: vgasa S--SvsimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVVPPDsyQA qamvd MGR6_RAT : 149- 195: gasas Sv-Sim--VANVLrLFaIPQISYASTApeLSDstrYDfFsRVVPPDsyQA qamvd MGR7_RAT : 157- 206: gviga SgsSvsimVANILrLFqIPQISYASTApeLSDdrrYDfFsRVVPPDsfQA qamvd MGR7_RAT : 159- 206: igasg SsvSim--VANILrLFqIPQISYASTApeLSDdrrYDfFsRVVPPDsfQA qamvd MGR7_RAT : 159- 206: igasg S--SvsimVANILrLFqIPQISYASTApeLSDdrrYDfFsRVVPPDsfQA qamvd MGR7_RAT : 160- 206: gasgs Sv-Sim--VANILrLFqIPQISYASTApeLSDdrrYDfFsRVVPPDsfQA qamvd D 4: 120.8224 10( 10) Y-x(2,3)-L-x(3,4)-C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV] Occurences: 10(10) CASR_BOVIN : 780- 828: gflig YtclLaai-CffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaS tygkf CASR_BOVIN : 780- 828: gflig Ytc-LlaaiCffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaS tygkf CASR_HUMAN : 779- 827: gflig YtclLaai-CffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaS tygkf CASR_HUMAN : 779- 827: gflig Ytc-LlaaiCffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaS tygkf MGR1_RAT : 759- 807: vapvg YnglLims-CtyYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfG snyki MGR1_RAT : 759- 807: vapvg Yng-LlimsCtyYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfG snyki MGR2_RAT : 734- 782: lgsla YnvlLial-CtlYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyV tssdy MGR2_RAT : 734- 782: lgsla Ynv-LlialCtlYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyV tssdy MGR3_RAT : 743- 791: lislt YdvvLvil-CtvYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyV tssdy MGR4_RAT : 759- 807: icllg YsmlLmvt-CtvYAIKTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfG tsqsa MGR4_RAT : 759- 807: icllg Ysm-LlmvtCtvYAIKTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfG tsqsa MGR5_HUMAN : 746- 794: vtplg YnglLils-CtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfG snyki MGR5_HUMAN : 746- 794: vtplg Yng-LlilsCtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfG snyki MGR5_RAT : 745- 793: vtplg YnglLils-CtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfG snyki MGR5_RAT : 745- 793: vtplg Yng-LlilsCtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfG snyki MGR6_RAT : 751- 799: igclg YsllLmvt-CtvYAIKARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfG taqsa MGR6_RAT : 751- 799: igclg Ysl-LlmvtCtvYAIKARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfG taqsa MGR7_RAT : 762- 810: icslg YsilLmvt-CtvYAIKTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfG taqsa MGR7_RAT : 762- 810: icslg Ysi-LlmvtCtvYAIKTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfG taqsa E 5: 120.4633 13( 10) V-x(0,1)-G-x(3)-S-[DGS]-[IV]-[AS]-x(2)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV]-P Occurences: 13(10) CASR_BOVIN : 142- 189: pstia VvGatgSGIStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIP ndehq CASR_BOVIN : 143- 189: stiav V-GatgSGIStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIP ndehq CASR_HUMAN : 141- 188: pstia VvGatgSGVStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIP ndehq CASR_HUMAN : 142- 188: stiav V-GatgSGVStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTIP ndehq MGR1_RAT : 159- 206: kpiag ViGpgsSSVAiqVQNLLqLFdIPQIAYSATSidLSDktlYKyFlRVVP sdtlq MGR2_RAT : 139- 186: tavtg ViGgsySDVSiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTVP pdffq MGR3_RAT : 145- 192: lliag ViGgsySSVSiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTVP pdfyq MGR4_RAT : 153- 200: ervvg ViGasgSSVSimVANILrLFkIPQISYASTApdLSDnsrYDfFsRVVP sdtyq MGR5_HUMAN : 146- 193: kpivg ViGpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVP sdaqq MGR5_RAT : 145- 192: kpivg ViGpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVVP sdaqq MGR6_RAT : 142- 189: ervva VvGasaSSVSimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVVP pdsyq MGR6_RAT : 143- 189: rvvav V-GasaSSVSimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVVP pdsyq MGR7_RAT : 153- 200: ekvvg ViGasgSSVSimVANILrLFqIPQISYASTApeLSDdrrYDfFsRVVP pdsfq F 6: 119.8278 12( 10) L-x(1,3)-C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 12(10) CASR_BOVIN : 784- 829: gytcl LaaiCffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 783- 828: gytcl LaaiCffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 763- 808: gyngl LimsCtyYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 738- 783: aynvl LialCtlYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 747- 792: tydvv LvilCtvYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 763- 808: gysml LmvtCtvYAIKTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 750- 795: gyngl LilsCtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_HUMAN : 752- 795: nglli Ls--CtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 749- 794: gyngl LilsCtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 751- 794: nglli Ls--CtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 755- 800: gysll LmvtCtvYAIKARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 766- 811: gysil LmvtCtvYAIKTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae G 7: 116.6577 10( 10) C-x(2)-[FY]-A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 788- 829: llaai CffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 787- 828: llaai CffFAFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 767- 808: llims CtyYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 742- 783: llial CtlYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 751- 792: vlvil CtvYAFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 767- 808: llmvt CtvYAIKTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 754- 795: llils CtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 753- 794: llils CtfYAFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 759- 800: llmvt CtvYAIKARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 770- 811: llmvt CtvYAIKTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae H 8: 115.7933 15( 10) V-x(1,3)-G-x(3)-S-[DGS]-[IV]-[AS]-x(2)-V-[AQ]-N-[ILV]-L-x-L-F-x-I-P-Q-[IV]-[AS]-Y-[AS]-[AS]-[ST]-[AS]-x(2)-L-S-[DN]-x(3)-[FY]-[DK]-x-F-x-R-[TV]-[IV] Occurences: 15(10) CASR_BOVIN : 142- 188: pstia Vv--GatgSGIStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTI pndeh CASR_HUMAN : 141- 187: pstia Vv--GatgSGVStaVANLLgLFyIPQVSYASSSrlLSNknqFKsFlRTI pndeh MGR1_RAT : 159- 205: kpiag Vi--GpgsSSVAiqVQNLLqLFdIPQIAYSATSidLSDktlYKyFlRVV psdtl MGR2_RAT : 139- 185: tavtg Vi--GgsySDVSiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTV ppdff MGR3_RAT : 145- 191: lliag Vi--GgsySSVSiqVANLLrLFqIPQISYASTSakLSDksrYDyFaRTV ppdfy MGR4_RAT : 151- 199: kperv VgviGasgSSVSimVANILrLFkIPQISYASTApdLSDnsrYDfFsRVV psdty MGR4_RAT : 153- 199: ervvg Vi--GasgSSVSimVANILrLFkIPQISYASTApdLSDnsrYDfFsRVV psdty MGR5_HUMAN : 144- 192: skkpi VgviGpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVV psdaq MGR5_HUMAN : 146- 192: kpivg Vi--GpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVV psdaq MGR5_RAT : 143- 191: skkpi VgviGpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVV psdaq MGR5_RAT : 145- 191: kpivg Vi--GpgsSSVAiqVQNLLqLFnIPQIAYSATSmdLSDktlFKyFmRVV psdaq MGR6_RAT : 140- 188: pperv VavvGasaSSVSimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVV ppdsy MGR6_RAT : 142- 188: ervva Vv--GasaSSVSimVANVLrLFaIPQISYASTApeLSDstrYDfFsRVV ppdsy MGR7_RAT : 151- 199: kpekv VgviGasgSSVSimVANILrLFqIPQISYASTApeLSDdrrYDfFsRVV ppdsf MGR7_RAT : 153- 199: ekvvg Vi--GasgSSVSimVANILrLFqIPQISYASTApeLSDdrrYDfFsRVV ppdsf I 9: 109.3032 10( 10) A-[FI]-K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 792- 829: icfff AFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 791- 828: icfff AFKSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 771- 808: sctyy AFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 746- 783: lctly AFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 755- 792: lctvy AFKTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 771- 808: tctvy AIKTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 758- 795: sctfy AFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 757- 794: sctfy AFKTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 763- 800: tctvy AIKARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 774- 811: tctvy AIKTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae J 10: 101.9620 10( 10) K-[AST]-R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 794- 829: fffaf KSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 793- 828: fffaf KSRklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 773- 808: tyyaf KTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 748- 783: tlyaf KTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 757- 792: tvyaf KTRkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 773- 808: tvyai KTRgvPETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 760- 795: tfyaf KTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 759- 794: tfyaf KTRnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 765- 800: tvyai KARgvPETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 776- 811: tvyai KTRgvPENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae K 11: 95.1876 10( 10) R-x(2)-P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 796- 829: fafks RklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 795- 828: fafks RklPENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 775- 808: yafkt RnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 750- 783: yafkt RkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 759- 792: yafkt RkcPENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 775- 808: yaikt RgvPETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 762- 795: yafkt RnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 761- 794: yafkt RnvPANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 767- 800: yaika RgvPETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 778- 811: yaikt RgvPENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae L 12: 94.9431 10( 10) F-x(0,1)-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] Occurences: 10(10) CASR_BOVIN : 184- 225: nqfks FlRTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree CASR_HUMAN : 183- 224: nqfks FlRTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree MGR1_RAT : 201- 240: tlyky FlRVVPSDtlQArAMLDIVKrynWTYVs--AVHTEgNygEsG mdafk MGR2_RAT : 181- 222: srydy FaRTVPPDffQAkAMAEILRffnWTYVstvASEGDyGetGiE afele MGR3_RAT : 187- 228: srydy FaRTVPPDfyQAkAMAEILRffnWTYVstvASEGDyGetGiE afeqe MGR4_RAT : 195- 236: srydf FsRVVPSDtyQAqAMVDIVRalkWNYVstlASEGSyGesGvE afiqk MGR5_HUMAN : 188- 227: tlfky FmRVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR5_RAT : 187- 226: tlfky FmRVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR6_RAT : 184- 225: trydf FsRVVPPDsyQAqAMVDIVRalgWNYVstlASEGNyGesGvE afvqi MGR7_RAT : 195- 236: rrydf FsRVVPPDsfQAqAMVDIVKalgWNYVstlASEGSyGekGvE sftqi M 13: 94.9431 13( 10) F-x(1,2)-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] Occurences: 13(10) CASR_BOVIN : 184- 225: nqfks Fl-RTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree CASR_HUMAN : 183- 224: nqfks Fl-RTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree MGR1_RAT : 201- 240: tlyky Fl-RVVPSDtlQArAMLDIVKrynWTYVs--AVHTEgNygEsG mdafk MGR2_RAT : 181- 222: srydy Fa-RTVPPDffQAkAMAEILRffnWTYVstvASEGDyGetGiE afele MGR3_RAT : 187- 228: srydy Fa-RTVPPDfyQAkAMAEILRffnWTYVstvASEGDyGetGiE afeqe MGR4_RAT : 194- 236: nsryd FfsRVVPSDtyQAqAMVDIVRalkWNYVstlASEGSyGesGvE afiqk MGR4_RAT : 195- 236: srydf Fs-RVVPSDtyQAqAMVDIVRalkWNYVstlASEGSyGesGvE afiqk MGR5_HUMAN : 188- 227: tlfky Fm-RVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR5_RAT : 187- 226: tlfky Fm-RVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR6_RAT : 183- 225: stryd FfsRVVPPDsyQAqAMVDIVRalgWNYVstlASEGNyGesGvE afvqi MGR6_RAT : 184- 225: trydf Fs-RVVPPDsyQAqAMVDIVRalgWNYVstlASEGNyGesGvE afvqi MGR7_RAT : 194- 236: drryd FfsRVVPPDsfQAqAMVDIVKalgWNYVstlASEGSyGekGvE sftqi MGR7_RAT : 195- 236: rrydf Fs-RVVPPDsfQAqAMVDIVKalgWNYVstlASEGSyGekGvE sftqi N 14: 94.4431 13( 10) F-x(0,2)-R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] Occurences: 13(10) CASR_BOVIN : 184- 225: nqfks Fl-RTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree CASR_HUMAN : 183- 224: nqfks Fl-RTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree MGR1_RAT : 201- 240: tlyky Fl-RVVPSDtlQArAMLDIVKrynWTYVs--AVHTEgNygEsG mdafk MGR2_RAT : 181- 222: srydy Fa-RTVPPDffQAkAMAEILRffnWTYVstvASEGDyGetGiE afele MGR3_RAT : 187- 228: srydy Fa-RTVPPDfyQAkAMAEILRffnWTYVstvASEGDyGetGiE afeqe MGR4_RAT : 194- 236: nsryd FfsRVVPSDtyQAqAMVDIVRalkWNYVstlASEGSyGesGvE afiqk MGR4_RAT : 195- 236: srydf Fs-RVVPSDtyQAqAMVDIVRalkWNYVstlASEGSyGesGvE afiqk MGR5_HUMAN : 188- 227: tlfky Fm-RVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR5_RAT : 187- 226: tlfky Fm-RVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR6_RAT : 183- 225: stryd FfsRVVPPDsyQAqAMVDIVRalgWNYVstlASEGNyGesGvE afvqi MGR6_RAT : 184- 225: trydf Fs-RVVPPDsyQAqAMVDIVRalgWNYVstlASEGNyGesGvE afvqi MGR7_RAT : 194- 236: drryd FfsRVVPPDsfQAqAMVDIVKalgWNYVstlASEGSyGekGvE sftqi MGR7_RAT : 195- 236: rrydf Fs-RVVPPDsfQAqAMVDIVKalgWNYVstlASEGSyGekGvE sftqi O 15: 93.6250 10( 10) N-x-[DS]-[NP]-x-L-L-P-[GN]-[ILMV]-x-L-G-x-[EHR]-[IL]-x-D-[ST]-C-x(2)-[DSV]-[AST]-x-A-L-E-[AQ]-[AST]-[IL]-[DEST]-F-[IV]-x-[ADQ] Occurences: 10(10) CASR_BOVIN : 83- 118: aieei NsSPaLLPNMtLGyRIfDTCntVSkALEATLSFVaQ nkids CASR_HUMAN : 82- 117: aieei NsSPaLLPNLtLGyRIfDTCntVSkALEATLSFVaQ nkids MGR1_RAT : 90- 125: tldki NaDPvLLPNItLGsEIrDSCwhSSvALEQSIEFIrD slisi MGR2_RAT : 73- 108: aldri NrDPhLLPGVrLGaHIlDSCskDThALEQALDFVrA slsrg MGR3_RAT : 80- 115: aidei NkDNyLLPGVkLGvHIlDTCsrDTyALEQSLEFVrA sltkv MGR4_RAT : 90- 125: aldri NnDPdLLPNItLGaRIlDTCsrDThALEQSLTFVqA liekd MGR5_HUMAN : 80- 115: tleri NsDPtLLPNItLGcEIrDSCwhSAvALEQSIEFIrD sliss MGR5_RAT : 80- 115: tleri NsDPtLLPNItLGcEIrDSCwhSAvALEQSIEFIrD sliss MGR6_RAT : 74- 109: aldrv NaDPeLLPGVrLGaRLlDTCsrDTyALEQALSFVqA lirgr MGR7_RAT : 90- 125: aldqi NsDPnLLPNVtLGaRIlDTCsrDTyALEQSLTFVqA liqkd P 16: 91.2731 10( 10) R-[TV]-[IV]-P-[NPS]-D-x(2)-Q-A-x-A-M-[ALV]-[DE]-I-[ILV]-[EKR]-x(3)-W-[NT]-[WY]-V-x(1,3)-A-[ASV]-[DEH]-[DGT]-[DENS]-x-[GN]-x(2)-[EG]-x-[EG] Occurences: 10(10) CASR_BOVIN : 186- 225: fksfl RTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree CASR_HUMAN : 185- 224: fksfl RTIPNDehQAtAMADIIEyfrWNWVgtiAADDDyGrpGiE kfree MGR1_RAT : 203- 240: ykyfl RVVPSDtlQArAMLDIVKrynWTYVs--AVHTEgNygEsG mdafk MGR2_RAT : 183- 222: ydyfa RTVPPDffQAkAMAEILRffnWTYVstvASEGDyGetGiE afele MGR3_RAT : 189- 228: ydyfa RTVPPDfyQAkAMAEILRffnWTYVstvASEGDyGetGiE afeqe MGR4_RAT : 197- 236: ydffs RVVPSDtyQAqAMVDIVRalkWNYVstlASEGSyGesGvE afiqk MGR5_HUMAN : 190- 227: fkyfm RVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR5_RAT : 189- 226: fkyfm RVVPSDaqQArAMVDIVKrynWTYVs--AVHTEgNygEsG meafk MGR6_RAT : 186- 225: ydffs RVVPPDsyQAqAMVDIVRalgWNYVstlASEGNyGesGvE afvqi MGR7_RAT : 197- 236: ydffs RVVPPDsfQAqAMVDIVKalgWNYVstlASEGSyGekGvE sftqi Q 17: 91.0176 10( 10) P-[AE]-[NT]-F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 799- 829: ksrkl PENFNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 798- 828: ksrkl PENFNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 778- 808: ktrnv PANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 753- 783: ktrkc PENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 762- 792: ktrkc PENFNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 778- 808: ktrgv PETFNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 765- 795: ktrnv PANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 764- 794: ktrnv PANFNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 770- 800: kargv PETFNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 781- 811: ktrgv PENFNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae R 18: 83.0781 10( 10) L-L-P-[GN]-[ILMV]-x-L-G-x-[EHR]-[IL]-x-D-[ST]-C-x(2)-[DSV]-[AST]-x-A-L-E-[AQ]-[AST]-[IL]-[DEST]-F-[IV]-x-[ADQ] Occurences: 10(10) CASR_BOVIN : 88- 118: nsspa LLPNMtLGyRIfDTCntVSkALEATLSFVaQ nkids CASR_HUMAN : 87- 117: nsspa LLPNLtLGyRIfDTCntVSkALEATLSFVaQ nkids MGR1_RAT : 95- 125: nadpv LLPNItLGsEIrDSCwhSSvALEQSIEFIrD slisi MGR2_RAT : 78- 108: nrdph LLPGVrLGaHIlDSCskDThALEQALDFVrA slsrg MGR3_RAT : 85- 115: nkdny LLPGVkLGvHIlDTCsrDTyALEQSLEFVrA sltkv MGR4_RAT : 95- 125: nndpd LLPNItLGaRIlDTCsrDThALEQSLTFVqA liekd MGR5_HUMAN : 85- 115: nsdpt LLPNItLGcEIrDSCwhSAvALEQSIEFIrD sliss MGR5_RAT : 85- 115: nsdpt LLPNItLGcEIrDSCwhSAvALEQSIEFIrD sliss MGR6_RAT : 79- 109: nadpe LLPGVrLGaRLlDTCsrDTyALEQALSFVqA lirgr MGR7_RAT : 95- 125: nsdpn LLPNVtLGaRIlDTCsrDTyALEQSLTFVqA liqkd S 19: 80.4278 10( 10) F-N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 802- 829: klpen FNEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 801- 828: klpen FNEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 781- 808: nvpan FNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 756- 783: kcpen FNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 765- 792: kcpen FNEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 781- 808: gvpet FNEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 768- 795: nvpan FNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 767- 794: nvpan FNEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 773- 800: gvpet FNEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 784- 811: gvpen FNEAKpIGFTMyttcIVWLAFIPIFfGT aqsae T 20: 76.2578 10( 10) N-E-A-K-x-I-[AGT]-F-[ST]-M-x(4)-I-[IV]-W-[IL]-[AS]-F-[ILV]-P-[AI]-[FY]-x-[GSV]-[ST] Occurences: 10(10) CASR_BOVIN : 803- 829: lpenf NEAKfITFSMliffIVWISFIPAYaST ygkfv CASR_HUMAN : 802- 828: lpenf NEAKfITFSMliffIVWISFIPAYaST ygkfv MGR1_RAT : 782- 808: vpanf NEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR2_RAT : 757- 783: cpenf NEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR3_RAT : 766- 792: cpenf NEAKfIGFTMyttcIIWLAFLPIFyVT ssdyr MGR4_RAT : 782- 808: vpetf NEAKpIGFTMyttcIVWLAFIPIFfGT sqsad MGR5_HUMAN : 769- 795: vpanf NEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR5_RAT : 768- 794: vpanf NEAKyIAFTMyttcIIWLAFVPIYfGS nykii MGR6_RAT : 774- 800: vpetf NEAKpIGFTMyttcIIWLAFVPIFfGT aqsae MGR7_RAT : 785- 811: vpenf NEAKpIGFTMyttcIVWLAFIPIFfGT aqsae Number of patterns evaluated by Pratt:85427 Total running time: 140 seconds