------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 40 sequences from file GLYCO_HORMONE_BETA_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 40 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename GLYCO_HORMONE_BETA_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CGHB_HUMAN 165 CGHB_PAPAN 165 FSHB_BOVIN 129 FSHB_HORSE 118 FSHB_HUMAN 129 FSHB_PIG 129 FSHB_RAT 130 FSHB_SHEEP 129 GTH1_FUNHE 114 GTH1_ONCKE 137 GTH1_THUOB 102 GTH2_ANGAN 140 GTH2_FUNHE 136 GTH2_ONCKE 142 GTH2_THUOB 115 GTHB_CTEID 146 GTHB_CYPCA 144 GTHB_HYPMO 141 GTHB_MURCI 113 GTHB_ONCTS 142 LSHB_BALAC 118 LSHB_BOVIN 141 LSHB_CANFA 138 LSHB_COTJA 166 LSHB_EQUAS 169 LSHB_HORSE 169 LSHB_HUMAN 141 LSHB_MELGA 159 LSHB_PHYCA 118 LSHB_PIG 141 LSHB_RANCA 112 LSHB_RAT 141 LSHB_SHEEP 141 TSHB_ANGAN 147 TSHB_BOVIN 138 TSHB_HUMAN 138 TSHB_MOUSE 138 TSHB_ONCMY 147 TSHB_PIG 138 TSHB_RAT 138 Pratt run started at Thu Feb 6 19:42:05 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 20.8503 40( 40) V-A-x(2)-C-x-C-x(2)-C 2: 16.6802 40( 40) A-x(2)-C-x-C-x(2)-C 3: 15.6802 63( 40) C-x(2)-C-x(3,4)-T-x(1,2)-C 4: 15.1802 40( 40) P-x(0,1)-V-x(0,2)-A-x(4)-C 5: 12.5102 40( 40) C-x-C-x(2)-C 6: 12.5102 40( 40) C-x-G-x-C 7: 12.0102 56( 40) C-x(3)-N-x(0,1)-T 8: 11.5102 68( 40) C-x(1,2)-G-x(0,1)-C 9: 11.0102 64( 40) C-x(1,2)-G-x(1,3)-C 10: 11.0102 61( 40) T-x(2,3)-A-x(0,2)-C 11: 11.0102 64( 40) G-x(0,1)-C-x(3,5)-V 12: 10.5102 43( 40) P-x(0,2)-V-x(1,3)-C 13: 8.3401 91( 40) P-x-C 14: 8.3401 94( 40) P-V 15: 8.3401 53( 40) V-x(5)-C 16: 8.3401 55( 40) C-x-G 17: 8.3401 65( 40) G-x-C 18: 8.3401 80( 40) I-x(4)-C 19: 8.3401 85( 40) T-x(5)-C 20: 8.3401 61( 40) T-x(2)-C Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 27.6238 40( 40) V-A-x(2)-C-x-C-x(2)-C-x(4)-[DST]-x-C B 2: 24.4837 42( 40) P-V-[AC]-x(2)-[CV]-x-[CT]-x(2)-C-x(4)-[DPST] C 3: 24.3259 40( 40) P-x(0,1)-V-x(0,2)-A-x(4)-C-x(2)-[AC]-x(4)-[DST]-x-[CT] D 4: 23.4537 40( 40) A-x(2)-C-x-C-x(2)-C-x(4)-[DST]-x-C E 5: 19.2837 40( 40) C-x-C-x(2)-C-x(4)-[DST]-x-C F 6: 16.3123 48( 40) C-x(1,2)-G-x(0,1)-C-x-[PST]-x(3)-[DNSV] G 7: 15.6802 63( 40) C-x(2)-C-x(3,4)-T-x(1,2)-C H 8: 13.7546 42( 40) P-x(0,2)-V-x(1,3)-C-x(4)-[CV] I 9: 13.4377 51( 40) C-x(3)-N-x(0,1)-T-x-[ACDNSTV] J 10: 13.2063 53( 40) T-[NPST]-x-C-x-[GIV] K 11: 12.8768 46( 40) I-[ACNST]-x-[GST]-x-C L 12: 12.5102 40( 40) C-x-G-x-C M 13: 11.0102 40( 40) P-x(0,1)-V-x(0,2)-A N 14: 11.0102 64( 40) C-x(1,2)-G-x(1,3)-C O 15: 11.0102 61( 40) T-x(2,3)-A-x(0,2)-C P 16: 11.0102 64( 40) G-x(0,1)-C-x(3,5)-V Q 17: 8.3401 91( 40) P-x-C R 18: 8.3401 53( 40) V-x(5)-C S 19: 8.3401 55( 40) C-x-G T 20: 8.3401 65( 40) G-x-C Best patterns with alignements: fitness hits(seqs) Pattern A 1: 27.6238 40( 40) V-A-x(2)-C-x-C-x(2)-C-x(4)-[DST]-x-C Occurences: 40(40) CGHB_HUMAN : 104- 120: vvsya VAlsCqCalCrrstTdC ggpkd CGHB_PAPAN : 104- 120: mvsvp VAlsCrCalCrrstSdC ggpkd FSHB_BOVIN : 96- 112: lytyp VAteChCskCdsdsTdC tvrgl FSHB_HORSE : 78- 94: lytyp VAtzChCgkCbsdsTbC tvrgl FSHB_HUMAN : 96- 112: lytyp VAtqChCgkCdsdsTdC tvrgl FSHB_PIG : 96- 112: lytyp VAteChCgkCdsdsTdC tvrgl FSHB_RAT : 97- 113: lytyp VAteChCgkCdsdsTdC tvrgl FSHB_SHEEP : 96- 112: lytyp VAteChCgkCdrdsTdC tvrgl GTH1_FUNHE : 88- 104: sityp VAtnCyCsaCntkdTyC trlya GTH1_ONCKE : 104- 120: pffip VAksCdCikCktdnTdC drism GTH1_THUOB : 73- 89: gvtyp VArnCeCtaCntgnTyC grlpg GTH2_ANGAN : 105- 121: hvtfp VAlsCdCnlCtmdtSdC aiqsl GTH2_FUNHE : 102- 118: vvtyp VAlsCrCggCamatSdC tfesl GTH2_ONCKE : 104- 120: hvtyp VAlsCdCslCnmdtSdC tiesl GTH2_THUOB : 81- 97: tvtyp VAlsChCgrCamdtSdC tfesl GTHB_CTEID : 110- 126: hityp VAlsCdCslCtmdtSdC tiesl GTHB_CYPCA : 108- 124: hityp VAlsCdCslCtmdtSdC tiesl GTHB_HYPMO : 105- 121: hityp VAlsCdCslCtmdtSdC tiesl GTHB_MURCI : 81- 97: hvtfp VAlsCdCnlCtmdtSdC aiqsl GTHB_ONCTS : 104- 120: hvtyp VAlsCdCslCnmdtSdC tiesl LSHB_BALAC : 84- 100: mvsfp VAlsChCgpCrlssSbC gpgra LSHB_BOVIN : 104- 120: mvsfp VAlsChCgpCrlssTdC ggprt LSHB_CANFA : 101- 117: mvsfp VAlsCrCgpCrlsnSdC ggpra LSHB_COTJA : 131- 147: kvilp VAlsCrCarCpiatSdC tvqgl LSHB_EQUAS : 104- 120: mvsfp VAlsChCgpCrlktTdC ggprd LSHB_HORSE : 104- 120: mvsfp VAlsChCgpCqiktTdC gvfrd LSHB_HUMAN : 104- 120: vvsfp VAlsCrCgpCrrstSdC ggpkd LSHB_MELGA : 123- 139: rvllp VAlsCrCarCpiatSdC tvqgl LSHB_PHYCA : 84- 100: mvsfp VAlsChCgpCrlssSdC gpgra LSHB_PIG : 104- 120: tvsfp VAlsChCgpCrlssSdC ggpra LSHB_RANCA : 79- 95: fftyp VAlsCyCdlCkmdySdC tvess LSHB_RAT : 104- 120: ivsfp VAlsCrCgpCrlssSdC ggprt LSHB_SHEEP : 104- 120: mvsfp VAlsChCgpCrlssTdC ggprt TSHB_ANGAN : 99- 115: rfsyp VAlhCtCraCdparDeC thras TSHB_BOVIN : 99- 115: yfsyp VAisCkCgkCntdySdC iheai TSHB_HUMAN : 99- 115: yfsyp VAlsCkCgkCntdySdC iheai TSHB_MOUSE : 99- 115: yfsfp VAvsCkCgkCntdnSdC iheav TSHB_ONCMY : 99- 115: lftyp VAlsChCgtCntdsDeC ahkas TSHB_PIG : 99- 115: yfsyp VAisCkCgkCntdySdC iheai TSHB_RAT : 99- 115: yfsyp VAlsCkCgkCntdySdC theav B 2: 24.4837 42( 40) P-V-[AC]-x(2)-[CV]-x-[CT]-x(2)-C-x(4)-[DPST] Occurences: 42(40) CGHB_HUMAN : 44- 59: ekegc PVCitVnTtiCagycP tmtrv CGHB_PAPAN : 44- 59: ekeac PVCvtVnTtiCagycP tmmrv CGHB_PAPAN : 103- 118: pmvsv PVAlsCrCalCrrstS dcggp FSHB_BOVIN : 95- 110: slyty PVAteChCskCdsdsT dctvr FSHB_HORSE : 77- 92: slyty PVAtzChCgkCbsdsT bctvr FSHB_HUMAN : 95- 110: slyty PVAtqChCgkCdsdsT dctvr FSHB_PIG : 95- 110: slyty PVAteChCgkCdsdsT dctvr FSHB_RAT : 96- 111: slyty PVAteChCgkCdsdsT dctvr FSHB_SHEEP : 95- 110: slyty PVAteChCgkCdrdsT dctvr GTH1_FUNHE : 87- 102: esity PVAtnCyCsaCntkdT yctrl GTH1_ONCKE : 103- 118: epffi PVAksCdCikCktdnT dcdri GTH1_THUOB : 72- 87: vgvty PVArnCeCtaCntgnT ycgrl GTH2_ANGAN : 104- 119: phvtf PVAlsCdCnlCtmdtS dcaiq GTH2_FUNHE : 101- 116: pvvty PVAlsCrCggCamatS dctfe GTH2_ONCKE : 103- 118: phvty PVAlsCdCslCnmdtS dctie GTH2_THUOB : 80- 95: ptvty PVAlsChCgrCamdtS dctfe GTHB_CTEID : 109- 124: phity PVAlsCdCslCtmdtS dctie GTHB_CYPCA : 107- 122: phity PVAlsCdCslCtmdtS dctie GTHB_HYPMO : 104- 119: phity PVAlsCdCslCtmdtS dctie GTHB_MURCI : 80- 95: phvtf PVAlsCdCnlCtmdtS dcaiq GTHB_ONCTS : 103- 118: phvty PVAlsCdCslCnmdtS dctie LSHB_BALAC : 83- 98: pmvsf PVAlsChCgpCrlssS bcgpg LSHB_BOVIN : 103- 118: pmvsf PVAlsChCgpCrlssT dcggp LSHB_CANFA : 100- 115: pmvsf PVAlsCrCgpCrlsnS dcggp LSHB_COTJA : 130- 145: pkvil PVAlsCrCarCpiatS dctvq LSHB_EQUAS : 103- 118: pmvsf PVAlsChCgpCrlktT dcggp LSHB_HORSE : 103- 118: pmvsf PVAlsChCgpCqiktT dcgvf LSHB_HUMAN : 44- 59: ekegc PVCitVnTtiCagycP tmmrv LSHB_HUMAN : 103- 118: pvvsf PVAlsCrCgpCrrstS dcggp LSHB_MELGA : 122- 137: prvll PVAlsCrCarCpiatS dctvq LSHB_PHYCA : 83- 98: pmvsf PVAlsChCgpCrlssS dcgpg LSHB_PIG : 103- 118: ptvsf PVAlsChCgpCrlssS dcggp LSHB_RANCA : 78- 93: pffty PVAlsCyCdlCkmdyS dctve LSHB_RAT : 103- 118: pivsf PVAlsCrCgpCrlssS dcggp LSHB_SHEEP : 103- 118: pmvsf PVAlsChCgpCrlssT dcggp TSHB_ANGAN : 98- 113: prfsy PVAlhCtCraCdparD ecthr TSHB_BOVIN : 98- 113: pyfsy PVAisCkCgkCntdyS dcihe TSHB_HUMAN : 98- 113: pyfsy PVAlsCkCgkCntdyS dcihe TSHB_MOUSE : 98- 113: pyfsf PVAvsCkCgkCntdnS dcihe TSHB_ONCMY : 98- 113: plfty PVAlsChCgtCntdsD ecahk TSHB_PIG : 98- 113: pyfsy PVAisCkCgkCntdyS dcihe TSHB_RAT : 98- 113: pyfsy PVAlsCkCgkCntdyS dcthe C 3: 24.3259 40( 40) P-x(0,1)-V-x(0,2)-A-x(4)-C-x(2)-[AC]-x(4)-[DST]-x-[CT] Occurences: 40(40) CGHB_HUMAN : 98- 118: prgvn PvVsyAvalsCqcAlcrrStT dcggp CGHB_PAPAN : 103- 120: pmvsv P-V--AlscrCalCrrstSdC ggpkd FSHB_BOVIN : 95- 112: slyty P-V--AtechCskCdsdsTdC tvrgl FSHB_HORSE : 77- 94: slyty P-V--AtzchCgkCbsdsTbC tvrgl FSHB_HUMAN : 95- 112: slyty P-V--AtqchCgkCdsdsTdC tvrgl FSHB_PIG : 95- 112: slyty P-V--AtechCgkCdsdsTdC tvrgl FSHB_RAT : 96- 113: slyty P-V--AtechCgkCdsdsTdC tvrgl FSHB_SHEEP : 95- 112: slyty P-V--AtechCgkCdrdsTdC tvrgl GTH1_FUNHE : 87- 104: esity P-V--AtncyCsaCntkdTyC trlya GTH1_ONCKE : 103- 120: epffi P-V--AkscdCikCktdnTdC drism GTH1_THUOB : 72- 89: vgvty P-V--ArnceCtaCntgnTyC grlpg GTH2_ANGAN : 104- 121: phvtf P-V--AlscdCnlCtmdtSdC aiqsl GTH2_FUNHE : 101- 118: pvvty P-V--AlscrCggCamatSdC tfesl GTH2_ONCKE : 103- 120: phvty P-V--AlscdCslCnmdtSdC tiesl GTH2_THUOB : 80- 97: ptvty P-V--AlschCgrCamdtSdC tfesl GTHB_CTEID : 109- 126: phity P-V--AlscdCslCtmdtSdC tiesl GTHB_CYPCA : 107- 124: phity P-V--AlscdCslCtmdtSdC tiesl GTHB_HYPMO : 104- 121: phity P-V--AlscdCslCtmdtSdC tiesl GTHB_MURCI : 80- 97: phvtf P-V--AlscdCnlCtmdtSdC aiqsl GTHB_ONCTS : 103- 120: phvty P-V--AlscdCslCnmdtSdC tiesl LSHB_BALAC : 83- 100: pmvsf P-V--AlschCgpCrlssSbC gpgra LSHB_BOVIN : 103- 120: pmvsf P-V--AlschCgpCrlssTdC ggprt LSHB_CANFA : 100- 117: pmvsf P-V--AlscrCgpCrlsnSdC ggpra LSHB_COTJA : 130- 147: pkvil P-V--AlscrCarCpiatSdC tvqgl LSHB_EQUAS : 103- 120: pmvsf P-V--AlschCgpCrlktTdC ggprd LSHB_HORSE : 103- 120: pmvsf P-V--AlschCgpCqiktTdC gvfrd LSHB_HUMAN : 103- 120: pvvsf P-V--AlscrCgpCrrstSdC ggpkd LSHB_MELGA : 122- 139: prvll P-V--AlscrCarCpiatSdC tvqgl LSHB_PHYCA : 83- 100: pmvsf P-V--AlschCgpCrlssSdC gpgra LSHB_PIG : 103- 120: ptvsf P-V--AlschCgpCrlssSdC ggpra LSHB_RANCA : 78- 95: pffty P-V--AlscyCdlCkmdySdC tvess LSHB_RAT : 103- 120: pivsf P-V--AlscrCgpCrlssSdC ggprt LSHB_SHEEP : 103- 120: pmvsf P-V--AlschCgpCrlssTdC ggprt TSHB_ANGAN : 98- 115: prfsy P-V--AlhctCraCdparDeC thras TSHB_BOVIN : 98- 115: pyfsy P-V--AisckCgkCntdySdC iheai TSHB_HUMAN : 98- 115: pyfsy P-V--AlsckCgkCntdySdC iheai TSHB_MOUSE : 98- 115: pyfsf P-V--AvsckCgkCntdnSdC iheav TSHB_ONCMY : 98- 115: plfty P-V--AlschCgtCntdsDeC ahkas TSHB_PIG : 98- 115: pyfsy P-V--AisckCgkCntdySdC iheai TSHB_RAT : 98- 115: pyfsy P-V--AlsckCgkCntdySdC theav D 4: 23.4537 40( 40) A-x(2)-C-x-C-x(2)-C-x(4)-[DST]-x-C Occurences: 40(40) CGHB_HUMAN : 105- 120: vsyav AlsCqCalCrrstTdC ggpkd CGHB_PAPAN : 105- 120: vsvpv AlsCrCalCrrstSdC ggpkd FSHB_BOVIN : 97- 112: ytypv AteChCskCdsdsTdC tvrgl FSHB_HORSE : 79- 94: ytypv AtzChCgkCbsdsTbC tvrgl FSHB_HUMAN : 97- 112: ytypv AtqChCgkCdsdsTdC tvrgl FSHB_PIG : 97- 112: ytypv AteChCgkCdsdsTdC tvrgl FSHB_RAT : 98- 113: ytypv AteChCgkCdsdsTdC tvrgl FSHB_SHEEP : 97- 112: ytypv AteChCgkCdrdsTdC tvrgl GTH1_FUNHE : 89- 104: itypv AtnCyCsaCntkdTyC trlya GTH1_ONCKE : 105- 120: ffipv AksCdCikCktdnTdC drism GTH1_THUOB : 74- 89: vtypv ArnCeCtaCntgnTyC grlpg GTH2_ANGAN : 106- 121: vtfpv AlsCdCnlCtmdtSdC aiqsl GTH2_FUNHE : 103- 118: vtypv AlsCrCggCamatSdC tfesl GTH2_ONCKE : 105- 120: vtypv AlsCdCslCnmdtSdC tiesl GTH2_THUOB : 82- 97: vtypv AlsChCgrCamdtSdC tfesl GTHB_CTEID : 111- 126: itypv AlsCdCslCtmdtSdC tiesl GTHB_CYPCA : 109- 124: itypv AlsCdCslCtmdtSdC tiesl GTHB_HYPMO : 106- 121: itypv AlsCdCslCtmdtSdC tiesl GTHB_MURCI : 82- 97: vtfpv AlsCdCnlCtmdtSdC aiqsl GTHB_ONCTS : 105- 120: vtypv AlsCdCslCnmdtSdC tiesl LSHB_BALAC : 85- 100: vsfpv AlsChCgpCrlssSbC gpgra LSHB_BOVIN : 105- 120: vsfpv AlsChCgpCrlssTdC ggprt LSHB_CANFA : 102- 117: vsfpv AlsCrCgpCrlsnSdC ggpra LSHB_COTJA : 132- 147: vilpv AlsCrCarCpiatSdC tvqgl LSHB_EQUAS : 105- 120: vsfpv AlsChCgpCrlktTdC ggprd LSHB_HORSE : 105- 120: vsfpv AlsChCgpCqiktTdC gvfrd LSHB_HUMAN : 105- 120: vsfpv AlsCrCgpCrrstSdC ggpkd LSHB_MELGA : 124- 139: vllpv AlsCrCarCpiatSdC tvqgl LSHB_PHYCA : 85- 100: vsfpv AlsChCgpCrlssSdC gpgra LSHB_PIG : 105- 120: vsfpv AlsChCgpCrlssSdC ggpra LSHB_RANCA : 80- 95: ftypv AlsCyCdlCkmdySdC tvess LSHB_RAT : 105- 120: vsfpv AlsCrCgpCrlssSdC ggprt LSHB_SHEEP : 105- 120: vsfpv AlsChCgpCrlssTdC ggprt TSHB_ANGAN : 100- 115: fsypv AlhCtCraCdparDeC thras TSHB_BOVIN : 100- 115: fsypv AisCkCgkCntdySdC iheai TSHB_HUMAN : 100- 115: fsypv AlsCkCgkCntdySdC iheai TSHB_MOUSE : 100- 115: fsfpv AvsCkCgkCntdnSdC iheav TSHB_ONCMY : 100- 115: ftypv AlsChCgtCntdsDeC ahkas TSHB_PIG : 100- 115: fsypv AisCkCgkCntdySdC iheai TSHB_RAT : 100- 115: fsypv AlsCkCgkCntdySdC theav E 5: 19.2837 40( 40) C-x-C-x(2)-C-x(4)-[DST]-x-C Occurences: 40(40) CGHB_HUMAN : 108- 120: avals CqCalCrrstTdC ggpkd CGHB_PAPAN : 108- 120: pvals CrCalCrrstSdC ggpkd FSHB_BOVIN : 100- 112: pvate ChCskCdsdsTdC tvrgl FSHB_HORSE : 82- 94: pvatz ChCgkCbsdsTbC tvrgl FSHB_HUMAN : 100- 112: pvatq ChCgkCdsdsTdC tvrgl FSHB_PIG : 100- 112: pvate ChCgkCdsdsTdC tvrgl FSHB_RAT : 101- 113: pvate ChCgkCdsdsTdC tvrgl FSHB_SHEEP : 100- 112: pvate ChCgkCdrdsTdC tvrgl GTH1_FUNHE : 92- 104: pvatn CyCsaCntkdTyC trlya GTH1_ONCKE : 108- 120: pvaks CdCikCktdnTdC drism GTH1_THUOB : 77- 89: pvarn CeCtaCntgnTyC grlpg GTH2_ANGAN : 109- 121: pvals CdCnlCtmdtSdC aiqsl GTH2_FUNHE : 106- 118: pvals CrCggCamatSdC tfesl GTH2_ONCKE : 108- 120: pvals CdCslCnmdtSdC tiesl GTH2_THUOB : 85- 97: pvals ChCgrCamdtSdC tfesl GTHB_CTEID : 114- 126: pvals CdCslCtmdtSdC tiesl GTHB_CYPCA : 112- 124: pvals CdCslCtmdtSdC tiesl GTHB_HYPMO : 109- 121: pvals CdCslCtmdtSdC tiesl GTHB_MURCI : 85- 97: pvals CdCnlCtmdtSdC aiqsl GTHB_ONCTS : 108- 120: pvals CdCslCnmdtSdC tiesl LSHB_BALAC : 88- 100: pvals ChCgpCrlssSbC gpgra LSHB_BOVIN : 108- 120: pvals ChCgpCrlssTdC ggprt LSHB_CANFA : 105- 117: pvals CrCgpCrlsnSdC ggpra LSHB_COTJA : 135- 147: pvals CrCarCpiatSdC tvqgl LSHB_EQUAS : 108- 120: pvals ChCgpCrlktTdC ggprd LSHB_HORSE : 108- 120: pvals ChCgpCqiktTdC gvfrd LSHB_HUMAN : 108- 120: pvals CrCgpCrrstSdC ggpkd LSHB_MELGA : 127- 139: pvals CrCarCpiatSdC tvqgl LSHB_PHYCA : 88- 100: pvals ChCgpCrlssSdC gpgra LSHB_PIG : 108- 120: pvals ChCgpCrlssSdC ggpra LSHB_RANCA : 83- 95: pvals CyCdlCkmdySdC tvess LSHB_RAT : 108- 120: pvals CrCgpCrlssSdC ggprt LSHB_SHEEP : 108- 120: pvals ChCgpCrlssTdC ggprt TSHB_ANGAN : 103- 115: pvalh CtCraCdparDeC thras TSHB_BOVIN : 103- 115: pvais CkCgkCntdySdC iheai TSHB_HUMAN : 103- 115: pvals CkCgkCntdySdC iheai TSHB_MOUSE : 103- 115: pvavs CkCgkCntdnSdC iheav TSHB_ONCMY : 103- 115: pvals ChCgtCntdsDeC ahkas TSHB_PIG : 103- 115: pvais CkCgkCntdySdC iheai TSHB_RAT : 103- 115: pvals CkCgkCntdySdC theav F 6: 16.3123 48( 40) C-x(1,2)-G-x(0,1)-C-x-[PST]-x(3)-[DNSV] Occurences: 48(40) CGHB_HUMAN : 54- 64: vntti Ca-GyCpTmtrV lqgvl CGHB_PAPAN : 54- 64: vntti Ca-GyCpTmmrV lqavl FSHB_BOVIN : 46- 56: inttw Ca-GyCyTrdlV yrdpa FSHB_HORSE : 28- 38: inttw Ca-GyCyTrdlV ykdpa FSHB_HUMAN : 46- 56: inttw Ca-GyCyTrdlV ykdpa FSHB_HUMAN : 100- 111: pvatq ChcGkCdSdstD ctvrg FSHB_PIG : 46- 56: inttw Ca-GyCyTrdlV ykdpa FSHB_PIG : 100- 111: pvate ChcGkCdSdstD ctvrg FSHB_RAT : 47- 57: inttw Ce-GyCyTrdlV ykdpa FSHB_RAT : 101- 112: pvate ChcGkCdSdstD ctvrg FSHB_SHEEP : 46- 56: inttw Ca-GyCyTrdlV ykdpa GTH1_FUNHE : 43- 53: ihtti Ce-GlCfSedaV fespd GTH1_ONCKE : 55- 65: ititt Ca-GlCeTtdlN yqstw GTH1_THUOB : 4- 14: gqg CsyG-ChPkniS isves GTH2_ANGAN : 55- 65: fqtsi Cs-GhCiTkdpS ykspl GTH2_FUNHE : 52- 62: vetti Cs-GyCaTkdpN yktsy GTH2_ONCKE : 54- 64: iqtpi Cs-GhCvTkepV fkspf GTH2_THUOB : 31- 41: vetti Cs-GhCiTkdpV ikipf GTHB_CTEID : 60- 70: fqtti Cs-GhClTkepV ykspf GTHB_CYPCA : 58- 68: lqtti Cs-GhClTkepV ykspf GTHB_HYPMO : 55- 65: fqtti Cs-GhClTkepV ykspf GTHB_MURCI : 31- 41: fqtsi Cs-GhCiTkdpS ykspl GTHB_ONCTS : 54- 64: irapi Cs-GhCvTkepV fkspf LSHB_BALAC : 34- 44: fttsi Ca-GyCpSmvrV lpaal LSHB_BOVIN : 54- 64: fttsi Ca-GyCpSmkrV lpvil LSHB_CANFA : 51- 61: fttti Ca-GyCpSmvrV lpaal LSHB_COTJA : 81- 91: vttta Cg-GyCrTrepV yrspl LSHB_EQUAS : 54- 64: fttsi Ca-GyCrSmvrV mpaal LSHB_HORSE : 54- 64: fttsi Ca-GyCpSmvrV mpaal LSHB_HUMAN : 54- 64: vntti Ca-GyCpTmmrV lqavl LSHB_MELGA : 73- 83: vttta Cg-GyCrTrepV yrspl LSHB_PHYCA : 34- 44: fttsi Ca-GyCpSmvrV lpaal LSHB_PIG : 54- 64: fttsi Ca-GyCpSmvrV lpaal LSHB_RANCA : 29- 39: fttsi Ct-GyCqTmdpV yktal LSHB_RAT : 54- 64: fttsi Ca-GyCpSmvrV lpaal LSHB_SHEEP : 54- 64: fttsi Ca-GyClSmkrV lpvil TSHB_ANGAN : 47- 57: intti Cm-GfCySldpN vvgpa TSHB_BOVIN : 47- 57: inttv Ca-GyCmTrdvN gklfl TSHB_BOVIN : 103- 114: pvais CkcGkCnTdysD cihea TSHB_HUMAN : 47- 57: intti Ca-GyCmTrdiN gklfl TSHB_HUMAN : 103- 114: pvals CkcGkCnTdysD cihea TSHB_MOUSE : 47- 57: intti Ca-GyCmTrdiN gklfl TSHB_MOUSE : 103- 114: pvavs CkcGkCnTdnsD cihea TSHB_ONCMY : 47- 57: intti Cm-GfCySrdsN mkela TSHB_PIG : 47- 57: intti Ca-GyCmTrdfN gklfl TSHB_PIG : 103- 114: pvais CkcGkCnTdysD cihea TSHB_RAT : 47- 57: intti Ca-GyCmTrdiN gklfl TSHB_RAT : 103- 114: pvals CkcGkCnTdysD cthea G 7: 15.6802 63( 40) C-x(2)-C-x(3,4)-T-x(1,2)-C Occurences: 63(40) CGHB_HUMAN : 43- 54: vekeg CpvCitvnTtiC agycp CGHB_HUMAN : 110- 120: alscq CalCrrstTd-C ggpkd CGHB_HUMAN : 110- 120: alscq CalCrrs-TtdC ggpkd CGHB_PAPAN : 43- 54: aekea CpvCvtvnTtiC agycp CGHB_PAPAN : 110- 120: alscr CalCrrs-TsdC ggpkd FSHB_BOVIN : 35- 46: vekee CgfCisinTtwC agycy FSHB_BOVIN : 102- 112: atech CskCdsdsTd-C tvrgl FSHB_HORSE : 17- 28: vekeg CrfCitinTtwC agycy FSHB_HORSE : 84- 94: atzch CgkCbsdsTb-C tvrgl FSHB_HUMAN : 35- 46: iekee CrfCisinTtwC agycy FSHB_HUMAN : 102- 112: atqch CgkCdsdsTd-C tvrgl FSHB_PIG : 35- 46: vekee CnfCisinTtwC agycy FSHB_PIG : 102- 112: atech CgkCdsdsTd-C tvrgl FSHB_RAT : 36- 47: vekee CrfCisinTtwC egycy FSHB_RAT : 103- 113: atech CgkCdsdsTd-C tvrgl FSHB_SHEEP : 35- 46: vekee CsfCisinTtwC agycy FSHB_SHEEP : 102- 112: atech CgkCdrdsTd-C tvrgl GTH1_FUNHE : 94- 104: atncy CsaCntkdTy-C trlya GTH1_ONCKE : 110- 120: akscd CikCktdnTd-C drism GTH1_THUOB : 79- 89: arnce CtaCntgnTy-C grlpg GTH2_ANGAN : 44- 55: vekdg CpkClvfqTsiC sghci GTH2_ANGAN : 111- 121: alscd CnlCtmd-TsdC aiqsl GTH2_FUNHE : 41- 52: lekrg CsgChrveTtiC sgyca GTH2_FUNHE : 108- 118: alscr CggCama-TsdC tfesl GTH2_ONCKE : 43- 54: lekeg CptClviqTpiC sghcv GTH2_ONCKE : 110- 120: alscd CslCnmd-TsdC tiesl GTH2_THUOB : 20- 31: vekeg CasChpveTtiC sghci GTH2_THUOB : 87- 97: alsch CgrCamd-TsdC tfesl GTHB_CTEID : 49- 60: vekeg CpkClvfqTtiC sghcl GTHB_CTEID : 116- 126: alscd CslCtmd-TsdC tiesl GTHB_CYPCA : 47- 58: vekeg CpkClvlqTtiC sghcl GTHB_CYPCA : 114- 124: alscd CslCtmd-TsdC tiesl GTHB_HYPMO : 44- 55: vekeg CpkClvfqTtiC sghcl GTHB_HYPMO : 111- 121: alscd CslCtmd-TsdC tiesl GTHB_MURCI : 20- 31: vekdg CpkClvfqTsiC sghci GTHB_MURCI : 87- 97: alscd CnlCtmd-TsdC aiqsl GTHB_ONCTS : 110- 120: alscd CslCnmd-TsdC tiesl LSHB_BALAC : 23- 34: azbza CpvCitftTsiC agycp LSHB_BOVIN : 43- 54: aekea CpvCitftTsiC agycp LSHB_BOVIN : 110- 120: alsch CgpCrlssTd-C ggprt LSHB_CANFA : 40- 51: aenea CpvCitftTtiC agycp LSHB_COTJA : 70- 81: vekee CpqCmavtTtaC ggycr LSHB_COTJA : 137- 147: alscr CarCpia-TsdC tvqgl LSHB_EQUAS : 43- 54: aekea CpiCitftTsiC agycr LSHB_EQUAS : 110- 120: alsch CgpCrlktTd-C ggprd LSHB_EQUAS : 110- 120: alsch CgpCrlk-TtdC ggprd LSHB_HORSE : 43- 54: aekea CpiCitftTsiC agycp LSHB_HORSE : 110- 120: alsch CgpCqiktTd-C gvfrd LSHB_HORSE : 110- 120: alsch CgpCqik-TtdC gvfrd LSHB_HUMAN : 43- 54: vekeg CpvCitvnTtiC agycp LSHB_HUMAN : 110- 120: alscr CgpCrrs-TsdC ggpkd LSHB_MELGA : 62- 73: vekde CpqCmavtTtaC ggycr LSHB_MELGA : 129- 139: alscr CarCpia-TsdC tvqgl LSHB_PHYCA : 23- 34: aqnza CpvCitftTsiC agycp LSHB_PIG : 43- 54: aenea CpvCitftTsiC agycp LSHB_RANCA : 18- 29: aekdh CpvCitftTsiC tgycq LSHB_RAT : 43- 54: aenef CpvCitftTsiC agycp LSHB_SHEEP : 43- 54: aekea CpvCitftTsiC agycl LSHB_SHEEP : 110- 120: alsch CgpCrlssTd-C ggprt TSHB_ANGAN : 36- 47: vekpe CdfCvainTtiC mgfcy TSHB_BOVIN : 36- 47: verke CayCltinTtvC agycm TSHB_HUMAN : 36- 47: ierre CayCltinTtiC agycm TSHB_MOUSE : 36- 47: vdrre CayCltinTtiC agycm TSHB_ONCMY : 36- 47: eerre CdfCvainTtiC mgfcy TSHB_PIG : 36- 47: verke CayCltinTtiC agycm TSHB_RAT : 36- 47: vdrre CayCltinTtiC agycm H 8: 13.7546 42( 40) P-x(0,2)-V-x(1,3)-C-x(4)-[CV] Occurences: 42(40) CGHB_HUMAN : 73- 82: vlpal Pq-Vv--CnyrdV rfesi CGHB_PAPAN : 73- 82: vlppv Pq-Vv--CnyreV rfesi CGHB_PAPAN : 103- 113: pmvsv P--ValsCrcalC rrsts FSHB_BOVIN : 95- 105: slyty P--VateChcskC dsdst FSHB_HORSE : 77- 87: slyty P--VatzChcgkC bsdst FSHB_HUMAN : 95- 105: slyty P--VatqChcgkC dsdst FSHB_PIG : 95- 105: slyty P--VateChcgkC dsdst FSHB_RAT : 96- 106: slyty P--VateChcgkC dsdst FSHB_SHEEP : 95- 105: slyty P--VateChcgkC drdst GTH1_FUNHE : 87- 97: esity P--VatnCycsaC ntkdt GTH1_ONCKE : 103- 113: epffi P--VaksCdcikC ktdnt GTH1_THUOB : 72- 82: vgvty P--VarnCectaC ntgnt GTH2_ANGAN : 104- 114: phvtf P--ValsCdcnlC tmdts GTH2_FUNHE : 101- 111: pvvty P--ValsCrcggC amats GTH2_ONCKE : 103- 113: phvty P--ValsCdcslC nmdts GTH2_THUOB : 80- 90: ptvty P--ValsChcgrC amdts GTHB_CTEID : 109- 119: phity P--ValsCdcslC tmdts GTHB_CYPCA : 107- 117: phity P--ValsCdcslC tmdts GTHB_HYPMO : 104- 114: phity P--ValsCdcslC tmdts GTHB_MURCI : 80- 90: phvtf P--ValsCdcnlC tmdts GTHB_ONCTS : 103- 113: phvty P--ValsCdcslC nmdts LSHB_BALAC : 83- 93: pmvsf P--ValsChcgpC rlsss LSHB_BOVIN : 103- 113: pmvsf P--ValsChcgpC rlsst LSHB_CANFA : 100- 110: pmvsf P--ValsCrcgpC rlsns LSHB_COTJA : 130- 140: pkvil P--ValsCrcarC piats LSHB_EQUAS : 103- 113: pmvsf P--ValsChcgpC rlktt LSHB_HORSE : 103- 113: pmvsf P--ValsChcgpC qiktt LSHB_HUMAN : 73- 82: vlppl Pq-Vv--CtyrdV rfesi LSHB_HUMAN : 103- 113: pvvsf P--ValsCrcgpC rrsts LSHB_MELGA : 122- 132: prvll P--ValsCrcarC piats LSHB_PHYCA : 83- 93: pmvsf P--ValsChcgpC rlsss LSHB_PIG : 103- 113: ptvsf P--ValsChcgpC rlsss LSHB_RANCA : 78- 88: pffty P--ValsCycdlC kmdys LSHB_RAT : 103- 113: pivsf P--ValsCrcgpC rlsss LSHB_SHEEP : 103- 113: pmvsf P--ValsChcgpC rlsst TSHB_ANGAN : 98- 108: prfsy P--ValhCtcraC dpard TSHB_BOVIN : 98- 108: pyfsy P--VaisCkcgkC ntdys TSHB_HUMAN : 98- 108: pyfsy P--ValsCkcgkC ntdys TSHB_MOUSE : 98- 108: pyfsf PvaVs--CkcgkC ntdns TSHB_MOUSE : 98- 108: pyfsf P--VavsCkcgkC ntdns TSHB_ONCMY : 98- 108: plfty P--ValsChcgtC ntdsd TSHB_PIG : 98- 108: pyfsy P--VaisCkcgkC ntdys TSHB_RAT : 98- 108: pyfsy P--ValsCkcgkC ntdys I 9: 13.4377 51( 40) C-x(3)-N-x(0,1)-T-x-[ACDNSTV] Occurences: 51(40) CGHB_HUMAN : 29- 37: plrpr CrpiNaTlA vekeg CGHB_HUMAN : 46- 54: egcpv CitvNtTiC agycp CGHB_PAPAN : 29- 37: plrpl CrpiNaTlA aekea CGHB_PAPAN : 46- 54: eacpv CvtvNtTiC agycp FSHB_BOVIN : 21- 29: iccrs CeltNiTiT vekee FSHB_BOVIN : 38- 46: eecgf CisiNtTwC agycy FSHB_HORSE : 3- 11: bs CzltNiTiA vekeg FSHB_HORSE : 20- 28: egcrf CitiNtTwC agycy FSHB_HUMAN : 21- 29: iccns CeltNiTiA iekee FSHB_HUMAN : 38- 46: eecrf CisiNtTwC agycy FSHB_PIG : 21- 29: iccns CeltNiTiT vekee FSHB_PIG : 38- 46: eecnf CisiNtTwC agycy FSHB_RAT : 22- 30: vcchs CeltNiTiS vekee FSHB_RAT : 39- 47: eecrf CisiNtTwC egycy FSHB_SHEEP : 21- 29: iccrs CeltNiTiT vekee FSHB_SHEEP : 38- 46: eecsf CisiNtTwC agycy GTH1_FUNHE : 94- 101: atncy CsacN-TkD tyctr GTH1_ONCKE : 113- 120: cdcik CktdN-TdC drism GTH1_THUOB : 79- 86: arnce CtacN-TgN tycgr GTH1_THUOB : 82- 89: cecta CntgN-TyC grlpg GTH2_ANGAN : 30- 38: slllp CepiNeTiS vekdg GTH2_FUNHE : 27- 35: fqlpr CqllNqTiS lekrg GTH2_ONCKE : 29- 37: slmqp CqpiNqTvS lekeg GTH2_THUOB : 6- 14: fqlpp CqliNqTvS vekeg GTHB_CTEID : 35- 43: sflpp CepvNeTvA vekeg GTHB_CYPCA : 33- 41: sylpp CepvNeTvA vekeg GTHB_HYPMO : 30- 38: sflpp CepvNeTvA vekeg GTHB_MURCI : 6- 14: svlqp CqpiNeTiS vekdg GTHB_ONCTS : 29- 37: slmqp CqpiNqTvS lekeg LSHB_BALAC : 9- 17: plrpl CrpiNaTlA azbza LSHB_BOVIN : 29- 37: plrpl CqpiNaTlA aekea LSHB_CANFA : 26- 34: plrpl CrpiNaTlA aenea LSHB_COTJA : 56- 64: sgrpp CrpiNvTvA vekee LSHB_EQUAS : 29- 37: plrpl CrpiNaTlA aekea LSHB_HORSE : 29- 37: plrpl CrpiNaTlA aekea LSHB_HUMAN : 46- 54: egcpv CitvNtTiC agycp LSHB_MELGA : 48- 56: ggrpp CrpiNvTvA vekde LSHB_PHYCA : 9- 17: plrpl CrpiNaTlA aqnza LSHB_PIG : 29- 37: plrpl CrpiNaTlA aenea LSHB_RANCA : 4- 12: rhv ChlaNaTiS aekdh LSHB_RAT : 29- 37: plrpl CrpvNaTlA aenef LSHB_SHEEP : 29- 37: plrpl CqpiNaTlA aekea TSHB_ANGAN : 39- 47: pecdf CvaiNtTiC mgfcy TSHB_BOVIN : 39- 46: kecay CltiN-TtV cagyc TSHB_BOVIN : 39- 47: kecay CltiNtTvC agycm TSHB_HUMAN : 39- 47: recay CltiNtTiC agycm TSHB_MOUSE : 39- 47: recay CltiNtTiC agycm TSHB_MOUSE : 105- 112: avsck CgkcN-TdN sdcih TSHB_ONCMY : 39- 47: recdf CvaiNtTiC mgfcy TSHB_ONCMY : 105- 112: alsch CgtcN-TdS decah TSHB_PIG : 39- 47: kecay CltiNtTiC agycm TSHB_RAT : 39- 47: recay CltiNtTiC agycm J 10: 13.2063 53( 40) T-[NPST]-x-C-x-[GIV] Occurences: 53(40) CGHB_HUMAN : 51- 56: citvn TTiCaG ycptm CGHB_HUMAN : 117- 122: lcrrs TTdCgG pkdhp CGHB_PAPAN : 51- 56: cvtvn TTiCaG ycptm CGHB_PAPAN : 117- 122: lcrrs TSdCgG pkdhp FSHB_BOVIN : 43- 48: cisin TTwCaG ycytr FSHB_HORSE : 25- 30: citin TTwCaG ycytr FSHB_HUMAN : 43- 48: cisin TTwCaG ycytr FSHB_PIG : 43- 48: cisin TTwCaG ycytr FSHB_RAT : 44- 49: cisin TTwCeG ycytr FSHB_SHEEP : 43- 48: cisin TTwCaG ycytr GTH1_FUNHE : 40- 45: rvcih TTiCeG lcfse GTH1_ONCKE : 127- 132: risma TPsCiV nplem GTH1_THUOB : 28- 33: tefil TTiCeG qcyle GTH2_ANGAN : 52- 57: clvfq TSiCsG hcitk GTH2_ANGAN : 118- 123: lctmd TSdCaI qslrp GTH2_FUNHE : 49- 54: chrve TTiCsG ycatk GTH2_ONCKE : 51- 56: clviq TPiCsG hcvtk GTH2_ONCKE : 117- 122: lcnmd TSdCtI eslqp GTH2_THUOB : 28- 33: chpve TTiCsG hcitk GTHB_CTEID : 57- 62: clvfq TTiCsG hcltk GTHB_CTEID : 123- 128: lctmd TSdCtI eslqp GTHB_CYPCA : 55- 60: clvlq TTiCsG hcltk GTHB_CYPCA : 121- 126: lctmd TSdCtI eslqp GTHB_HYPMO : 52- 57: clvfq TTiCsG hcltk GTHB_HYPMO : 118- 123: lctmd TSdCtI eslqp GTHB_MURCI : 28- 33: clvfq TSiCsG hcitk GTHB_MURCI : 94- 99: lctmd TSdCaI qslrp GTHB_ONCTS : 117- 122: lcnmd TSdCtI eslqp LSHB_BALAC : 31- 36: citft TSiCaG ycpsm LSHB_BOVIN : 51- 56: citft TSiCaG ycpsm LSHB_CANFA : 48- 53: citft TTiCaG ycpsm LSHB_COTJA : 78- 83: cmavt TTaCgG ycrtr LSHB_COTJA : 144- 149: rcpia TSdCtV qglgp LSHB_EQUAS : 51- 56: citft TSiCaG ycrsm LSHB_EQUAS : 117- 122: pcrlk TTdCgG prdhp LSHB_HORSE : 51- 56: citft TSiCaG ycpsm LSHB_HORSE : 117- 122: pcqik TTdCgV frdqp LSHB_HUMAN : 51- 56: citvn TTiCaG ycptm LSHB_HUMAN : 117- 122: pcrrs TSdCgG pkdhp LSHB_MELGA : 70- 75: cmavt TTaCgG ycrtr LSHB_MELGA : 136- 141: rcpia TSdCtV qglgp LSHB_PHYCA : 31- 36: citft TSiCaG ycpsm LSHB_PIG : 51- 56: citft TSiCaG ycpsm LSHB_RANCA : 26- 31: citft TSiCtG ycqtm LSHB_RAT : 51- 56: citft TSiCaG ycpsm LSHB_SHEEP : 51- 56: citft TSiCaG yclsm TSHB_ANGAN : 44- 49: cvain TTiCmG fcysl TSHB_BOVIN : 44- 49: cltin TTvCaG ycmtr TSHB_HUMAN : 44- 49: cltin TTiCaG ycmtr TSHB_MOUSE : 44- 49: cltin TTiCaG ycmtr TSHB_ONCMY : 44- 49: cvain TTiCmG fcysr TSHB_PIG : 44- 49: cltin TTiCaG ycmtr TSHB_RAT : 44- 49: cltin TTiCaG ycmtr K 11: 12.8768 46( 40) I-[ACNST]-x-[GST]-x-C Occurences: 46(40) CGHB_HUMAN : 53- 58: tvntt ICaGyC ptmtr CGHB_PAPAN : 53- 58: tvntt ICaGyC ptmmr FSHB_BOVIN : 41- 46: gfcis INtTwC agycy FSHB_HORSE : 23- 28: rfcit INtTwC agycy FSHB_HUMAN : 41- 46: rfcis INtTwC agycy FSHB_PIG : 41- 46: nfcis INtTwC agycy FSHB_RAT : 42- 47: rfcis INtTwC egycy FSHB_SHEEP : 41- 46: sfcis INtTwC agycy GTH1_FUNHE : 42- 47: cihtt ICeGlC fseda GTH1_ONCKE : 50- 55: dchgs ITiTtC aglce GTH1_THUOB : 30- 35: filtt ICeGqC yledp GTH2_ANGAN : 54- 59: vfqts ICsGhC itkdp GTH2_FUNHE : 51- 56: rvett ICsGyC atkdp GTH2_ONCKE : 53- 58: viqtp ICsGhC vtkep GTH2_THUOB : 30- 35: pvett ICsGhC itkdp GTHB_CTEID : 59- 64: vfqtt ICsGhC ltkep GTHB_CYPCA : 57- 62: vlqtt ICsGhC ltkep GTHB_HYPMO : 54- 59: vfqtt ICsGhC ltkep GTHB_MURCI : 30- 35: vfqts ICsGhC itkdp GTHB_ONCTS : 53- 58: virap ICsGhC vtkep LSHB_BALAC : 33- 38: tftts ICaGyC psmvr LSHB_BOVIN : 53- 58: tftts ICaGyC psmkr LSHB_CANFA : 50- 55: tfttt ICaGyC psmvr LSHB_COTJA : 142- 147: carcp IAtSdC tvqgl LSHB_EQUAS : 53- 58: tftts ICaGyC rsmvr LSHB_HORSE : 53- 58: tftts ICaGyC psmvr LSHB_HUMAN : 53- 58: tvntt ICaGyC ptmmr LSHB_MELGA : 134- 139: carcp IAtSdC tvqgl LSHB_PHYCA : 33- 38: tftts ICaGyC psmvr LSHB_PIG : 53- 58: tftts ICaGyC psmvr LSHB_RANCA : 28- 33: tftts ICtGyC qtmdp LSHB_RAT : 53- 58: tftts ICaGyC psmvr LSHB_SHEEP : 53- 58: tftts ICaGyC lsmkr TSHB_ANGAN : 42- 47: dfcva INtTiC mgfcy TSHB_ANGAN : 46- 51: aintt ICmGfC ysldp TSHB_BOVIN : 42- 47: ayclt INtTvC agycm TSHB_HUMAN : 42- 47: ayclt INtTiC agycm TSHB_HUMAN : 46- 51: tintt ICaGyC mtrdi TSHB_MOUSE : 42- 47: ayclt INtTiC agycm TSHB_MOUSE : 46- 51: tintt ICaGyC mtrdi TSHB_ONCMY : 42- 47: dfcva INtTiC mgfcy TSHB_ONCMY : 46- 51: aintt ICmGfC ysrds TSHB_PIG : 42- 47: ayclt INtTiC agycm TSHB_PIG : 46- 51: tintt ICaGyC mtrdf TSHB_RAT : 42- 47: ayclt INtTiC agycm TSHB_RAT : 46- 51: tintt ICaGyC mtrdi L 12: 12.5102 40( 40) C-x-G-x-C Occurences: 40(40) CGHB_HUMAN : 54- 58: vntti CaGyC ptmtr CGHB_PAPAN : 54- 58: vntti CaGyC ptmmr FSHB_BOVIN : 46- 50: inttw CaGyC ytrdl FSHB_HORSE : 28- 32: inttw CaGyC ytrdl FSHB_HUMAN : 46- 50: inttw CaGyC ytrdl FSHB_PIG : 46- 50: inttw CaGyC ytrdl FSHB_RAT : 47- 51: inttw CeGyC ytrdl FSHB_SHEEP : 46- 50: inttw CaGyC ytrdl GTH1_FUNHE : 43- 47: ihtti CeGlC fseda GTH1_ONCKE : 55- 59: ititt CaGlC ettdl GTH1_THUOB : 31- 35: iltti CeGqC yledp GTH2_ANGAN : 55- 59: fqtsi CsGhC itkdp GTH2_FUNHE : 52- 56: vetti CsGyC atkdp GTH2_ONCKE : 54- 58: iqtpi CsGhC vtkep GTH2_THUOB : 31- 35: vetti CsGhC itkdp GTHB_CTEID : 60- 64: fqtti CsGhC ltkep GTHB_CYPCA : 58- 62: lqtti CsGhC ltkep GTHB_HYPMO : 55- 59: fqtti CsGhC ltkep GTHB_MURCI : 31- 35: fqtsi CsGhC itkdp GTHB_ONCTS : 54- 58: irapi CsGhC vtkep LSHB_BALAC : 34- 38: fttsi CaGyC psmvr LSHB_BOVIN : 54- 58: fttsi CaGyC psmkr LSHB_CANFA : 51- 55: fttti CaGyC psmvr LSHB_COTJA : 81- 85: vttta CgGyC rtrep LSHB_EQUAS : 54- 58: fttsi CaGyC rsmvr LSHB_HORSE : 54- 58: fttsi CaGyC psmvr LSHB_HUMAN : 54- 58: vntti CaGyC ptmmr LSHB_MELGA : 73- 77: vttta CgGyC rtrep LSHB_PHYCA : 34- 38: fttsi CaGyC psmvr LSHB_PIG : 54- 58: fttsi CaGyC psmvr LSHB_RANCA : 29- 33: fttsi CtGyC qtmdp LSHB_RAT : 54- 58: fttsi CaGyC psmvr LSHB_SHEEP : 54- 58: fttsi CaGyC lsmkr TSHB_ANGAN : 47- 51: intti CmGfC ysldp TSHB_BOVIN : 47- 51: inttv CaGyC mtrdv TSHB_HUMAN : 47- 51: intti CaGyC mtrdi TSHB_MOUSE : 47- 51: intti CaGyC mtrdi TSHB_ONCMY : 47- 51: intti CmGfC ysrds TSHB_PIG : 47- 51: intti CaGyC mtrdf TSHB_RAT : 47- 51: intti CaGyC mtrdi M 13: 11.0102 40( 40) P-x(0,1)-V-x(0,2)-A Occurences: 40(40) CGHB_HUMAN : 98- 103: prgvn PvVsyA valsc CGHB_PAPAN : 103- 105: pmvsv P-V--A lscrc FSHB_BOVIN : 95- 97: slyty P-V--A techc FSHB_HORSE : 77- 79: slyty P-V--A tzchc FSHB_HUMAN : 95- 97: slyty P-V--A tqchc FSHB_PIG : 95- 97: slyty P-V--A techc FSHB_RAT : 96- 98: slyty P-V--A techc FSHB_SHEEP : 95- 97: slyty P-V--A techc GTH1_FUNHE : 87- 89: esity P-V--A tncyc GTH1_ONCKE : 103- 105: epffi P-V--A kscdc GTH1_THUOB : 72- 74: vgvty P-V--A rncec GTH2_ANGAN : 104- 106: phvtf P-V--A lscdc GTH2_FUNHE : 101- 103: pvvty P-V--A lscrc GTH2_ONCKE : 103- 105: phvty P-V--A lscdc GTH2_THUOB : 80- 82: ptvty P-V--A lschc GTHB_CTEID : 109- 111: phity P-V--A lscdc GTHB_CYPCA : 107- 109: phity P-V--A lscdc GTHB_HYPMO : 104- 106: phity P-V--A lscdc GTHB_MURCI : 80- 82: phvtf P-V--A lscdc GTHB_ONCTS : 103- 105: phvty P-V--A lscdc LSHB_BALAC : 83- 85: pmvsf P-V--A lschc LSHB_BOVIN : 103- 105: pmvsf P-V--A lschc LSHB_CANFA : 100- 102: pmvsf P-V--A lscrc LSHB_COTJA : 130- 132: pkvil P-V--A lscrc LSHB_EQUAS : 103- 105: pmvsf P-V--A lschc LSHB_HORSE : 103- 105: pmvsf P-V--A lschc LSHB_HUMAN : 103- 105: pvvsf P-V--A lscrc LSHB_MELGA : 122- 124: prvll P-V--A lscrc LSHB_PHYCA : 83- 85: pmvsf P-V--A lschc LSHB_PIG : 103- 105: ptvsf P-V--A lschc LSHB_RANCA : 78- 80: pffty P-V--A lscyc LSHB_RAT : 103- 105: pivsf P-V--A lscrc LSHB_SHEEP : 103- 105: pmvsf P-V--A lschc TSHB_ANGAN : 98- 100: prfsy P-V--A lhctc TSHB_BOVIN : 98- 100: pyfsy P-V--A isckc TSHB_HUMAN : 98- 100: pyfsy P-V--A lsckc TSHB_MOUSE : 98- 100: pyfsf P-V--A vsckc TSHB_ONCMY : 98- 100: plfty P-V--A lschc TSHB_PIG : 98- 100: pyfsy P-V--A isckc TSHB_RAT : 98- 100: pyfsy P-V--A lsckc N 14: 11.0102 64( 40) C-x(1,2)-G-x(1,3)-C Occurences: 64(40) CGHB_HUMAN : 54- 58: vntti Ca-Gy--C ptmtr CGHB_PAPAN : 54- 58: vntti Ca-Gy--C ptmmr FSHB_BOVIN : 46- 50: inttw Ca-Gy--C ytrdl FSHB_HORSE : 28- 32: inttw Ca-Gy--C ytrdl FSHB_HORSE : 82- 87: pvatz ChcGk--C bsdst FSHB_HUMAN : 46- 50: inttw Ca-Gy--C ytrdl FSHB_HUMAN : 100- 105: pvatq ChcGk--C dsdst FSHB_PIG : 46- 50: inttw Ca-Gy--C ytrdl FSHB_PIG : 100- 105: pvate ChcGk--C dsdst FSHB_RAT : 47- 51: inttw Ce-Gy--C ytrdl FSHB_RAT : 101- 106: pvate ChcGk--C dsdst FSHB_SHEEP : 46- 50: inttw Ca-Gy--C ytrdl FSHB_SHEEP : 100- 105: pvate ChcGk--C drdst GTH1_FUNHE : 43- 47: ihtti Ce-Gl--C fseda GTH1_ONCKE : 55- 59: ititt Ca-Gl--C ettdl GTH1_THUOB : 31- 35: iltti Ce-Gq--C yledp GTH1_THUOB : 82- 89: cecta CntGntyC grlpg GTH2_ANGAN : 55- 59: fqtsi Cs-Gh--C itkdp GTH2_FUNHE : 52- 56: vetti Cs-Gy--C atkdp GTH2_FUNHE : 106- 111: pvals CrcGg--C amats GTH2_ONCKE : 54- 58: iqtpi Cs-Gh--C vtkep GTH2_THUOB : 31- 35: vetti Cs-Gh--C itkdp GTH2_THUOB : 85- 90: pvals ChcGr--C amdts GTHB_CTEID : 60- 64: fqtti Cs-Gh--C ltkep GTHB_CYPCA : 58- 62: lqtti Cs-Gh--C ltkep GTHB_HYPMO : 55- 59: fqtti Cs-Gh--C ltkep GTHB_MURCI : 31- 35: fqtsi Cs-Gh--C itkdp GTHB_ONCTS : 54- 58: irapi Cs-Gh--C vtkep LSHB_BALAC : 34- 38: fttsi Ca-Gy--C psmvr LSHB_BALAC : 88- 93: pvals ChcGp--C rlsss LSHB_BOVIN : 54- 58: fttsi Ca-Gy--C psmkr LSHB_BOVIN : 108- 113: pvals ChcGp--C rlsst LSHB_CANFA : 51- 55: fttti Ca-Gy--C psmvr LSHB_CANFA : 105- 110: pvals CrcGp--C rlsns LSHB_COTJA : 81- 85: vttta Cg-Gy--C rtrep LSHB_EQUAS : 54- 58: fttsi Ca-Gy--C rsmvr LSHB_EQUAS : 108- 113: pvals ChcGp--C rlktt LSHB_HORSE : 54- 58: fttsi Ca-Gy--C psmvr LSHB_HORSE : 108- 113: pvals ChcGp--C qiktt LSHB_HUMAN : 54- 58: vntti Ca-Gy--C ptmmr LSHB_HUMAN : 108- 113: pvals CrcGp--C rrsts LSHB_MELGA : 73- 77: vttta Cg-Gy--C rtrep LSHB_PHYCA : 34- 38: fttsi Ca-Gy--C psmvr LSHB_PHYCA : 88- 93: pvals ChcGp--C rlsss LSHB_PIG : 54- 58: fttsi Ca-Gy--C psmvr LSHB_PIG : 108- 113: pvals ChcGp--C rlsss LSHB_RANCA : 29- 33: fttsi Ct-Gy--C qtmdp LSHB_RAT : 54- 58: fttsi Ca-Gy--C psmvr LSHB_RAT : 108- 113: pvals CrcGp--C rlsss LSHB_SHEEP : 54- 58: fttsi Ca-Gy--C lsmkr LSHB_SHEEP : 108- 113: pvals ChcGp--C rlsst TSHB_ANGAN : 47- 51: intti Cm-Gf--C ysldp TSHB_BOVIN : 47- 51: inttv Ca-Gy--C mtrdv TSHB_BOVIN : 103- 108: pvais CkcGk--C ntdys TSHB_HUMAN : 47- 51: intti Ca-Gy--C mtrdi TSHB_HUMAN : 103- 108: pvals CkcGk--C ntdys TSHB_MOUSE : 47- 51: intti Ca-Gy--C mtrdi TSHB_MOUSE : 103- 108: pvavs CkcGk--C ntdns TSHB_ONCMY : 47- 51: intti Cm-Gf--C ysrds TSHB_ONCMY : 103- 108: pvals ChcGt--C ntdsd TSHB_PIG : 47- 51: intti Ca-Gy--C mtrdf TSHB_PIG : 103- 108: pvais CkcGk--C ntdys TSHB_RAT : 47- 51: intti Ca-Gy--C mtrdi TSHB_RAT : 103- 108: pvals CkcGk--C ntdys O 15: 11.0102 61( 40) T-x(2,3)-A-x(0,2)-C Occurences: 61(40) CGHB_HUMAN : 51- 58: citvn TticAgyC ptmtr CGHB_HUMAN : 52- 58: itvnt Tic-AgyC ptmtr CGHB_PAPAN : 51- 58: cvtvn TticAgyC ptmmr CGHB_PAPAN : 52- 58: vtvnt Tic-AgyC ptmmr FSHB_BOVIN : 43- 50: cisin TtwcAgyC ytrdl FSHB_BOVIN : 44- 50: isint Twc-AgyC ytrdl FSHB_BOVIN : 93- 100: adsly TypvAteC hcskc FSHB_HORSE : 25- 32: citin TtwcAgyC ytrdl FSHB_HORSE : 26- 32: itint Twc-AgyC ytrdl FSHB_HORSE : 75- 82: adsly TypvAtzC hcgkc FSHB_HUMAN : 43- 50: cisin TtwcAgyC ytrdl FSHB_HUMAN : 44- 50: isint Twc-AgyC ytrdl FSHB_HUMAN : 93- 100: adsly TypvAtqC hcgkc FSHB_PIG : 43- 50: cisin TtwcAgyC ytrdl FSHB_PIG : 44- 50: isint Twc-AgyC ytrdl FSHB_PIG : 93- 100: adsly TypvAteC hcgkc FSHB_RAT : 94- 101: sdsly TypvAteC hcgkc FSHB_SHEEP : 43- 50: cisin TtwcAgyC ytrdl FSHB_SHEEP : 44- 50: isint Twc-AgyC ytrdl FSHB_SHEEP : 93- 100: adsly TypvAteC hcgkc GTH1_FUNHE : 85- 92: cpesi TypvAtnC ycsac GTH1_ONCKE : 53- 59: gsiti Ttc-AglC ettdl GTH1_THUOB : 70- 77: cpvgv TypvArnC ectac GTH2_ANGAN : 102- 109: vdphv TfpvAlsC dcnlc GTH2_FUNHE : 99- 106: vdpvv TypvAlsC rcggc GTH2_ONCKE : 101- 108: vdphv TypvAlsC dcslc GTH2_THUOB : 78- 85: vdptv TypvAlsC hcgrc GTHB_CTEID : 107- 114: vdphi TypvAlsC dcslc GTHB_CYPCA : 105- 112: vdphi TypvAlsC dcslc GTHB_HYPMO : 102- 109: vdphi TypvAlsC dcslc GTHB_MURCI : 78- 85: vdphv TfpvAlsC dcnlc GTHB_ONCTS : 101- 108: sdphv TypvAlsC dcslc LSHB_BALAC : 31- 38: citft TsicAgyC psmvr LSHB_BOVIN : 51- 58: citft TsicAgyC psmkr LSHB_BOVIN : 125- 130: cggpr TqplA--C dhppl LSHB_CANFA : 48- 55: citft TticAgyC psmvr LSHB_CANFA : 49- 55: itftt Tic-AgyC psmvr LSHB_COTJA : 77- 81: qcmav Ttt-A--C ggycr LSHB_EQUAS : 51- 58: citft TsicAgyC rsmvr LSHB_HORSE : 51- 58: citft TsicAgyC psmvr LSHB_HUMAN : 51- 58: citvn TticAgyC ptmmr LSHB_HUMAN : 52- 58: itvnt Tic-AgyC ptmmr LSHB_MELGA : 69- 73: qcmav Ttt-A--C ggycr LSHB_PHYCA : 31- 38: citft TsicAgyC psmvr LSHB_PIG : 51- 58: citft TsicAgyC psmvr LSHB_RANCA : 76- 83: tdpff TypvAlsC ycdlc LSHB_RAT : 51- 58: citft TsicAgyC psmvr LSHB_SHEEP : 51- 58: citft TsicAgyC lsmkr LSHB_SHEEP : 125- 130: cggpr TqplA--C dhppl TSHB_ANGAN : 104- 108: valhc Tcr-A--C dpard TSHB_BOVIN : 44- 51: cltin TtvcAgyC mtrdv TSHB_BOVIN : 45- 51: ltint Tvc-AgyC mtrdv TSHB_HUMAN : 44- 51: cltin TticAgyC mtrdi TSHB_HUMAN : 45- 51: ltint Tic-AgyC mtrdi TSHB_MOUSE : 44- 51: cltin TticAgyC mtrdi TSHB_MOUSE : 45- 51: ltint Tic-AgyC mtrdi TSHB_ONCMY : 96- 103: anplf TypvAlsC hcgtc TSHB_PIG : 44- 51: cltin TticAgyC mtrdf TSHB_PIG : 45- 51: ltint Tic-AgyC mtrdf TSHB_RAT : 44- 51: cltin TticAgyC mtrdi TSHB_RAT : 45- 51: ltint Tic-AgyC mtrdi P 16: 11.0102 64( 40) G-x(0,1)-C-x(3,5)-V Occurences: 64(40) CGHB_HUMAN : 42- 49: aveke G-CpvcitV nttic CGHB_HUMAN : 56- 64: ttica GyCptmtrV lqgvl CGHB_HUMAN : 91- 96: sirlp G-Cprg--V npvvs CGHB_PAPAN : 56- 64: ttica GyCptmmrV lqavl CGHB_PAPAN : 91- 96: sirlp G-Cppg--V dpmvs FSHB_BOVIN : 48- 56: ttwca GyCytrdlV yrdpa FSHB_HORSE : 30- 38: ttwca GyCytrdlV ykdpa FSHB_HUMAN : 48- 56: ttwca GyCytrdlV ykdpa FSHB_PIG : 48- 56: ttwca GyCytrdlV ykdpa FSHB_RAT : 49- 57: ttwce GyCytrdlV ykdpa FSHB_SHEEP : 48- 56: ttwca GyCytrdlV ykdpa GTH1_FUNHE : 19- 25: evgcf G-Chlkn-V sipme GTH1_FUNHE : 45- 53: ttice GlCfsedaV fespd GTH1_ONCKE : 92- 97: kvyle G-Cpsg--V epffi GTH1_THUOB : 33- 41: ttice GqCyledpV yishd GTH1_THUOB : 64- 69: vkhie G-Cpvg--V typva GTH2_ANGAN : 43- 49: svekd G-Cpkcl-V fqtsi GTH2_FUNHE : 40- 47: slekr G-CsgchrV ettic GTH2_ONCKE : 42- 48: sleke G-Cptcl-V iqtpi GTH2_ONCKE : 56- 64: tpics GhCvtkepV fkspf GTH2_THUOB : 19- 26: sveke G-CaschpV ettic GTH2_THUOB : 33- 41: ttics GhCitkdpV ikipf GTHB_CTEID : 48- 54: aveke G-Cpkcl-V fqtti GTHB_CTEID : 62- 70: ttics GhCltkepV ykspf GTHB_CYPCA : 46- 52: aveke G-Cpkcl-V lqtti GTHB_CYPCA : 60- 68: ttics GhCltkepV ykspf GTHB_HYPMO : 43- 49: aveke G-Cpkcl-V fqtti GTHB_HYPMO : 57- 65: ttics GhCltkepV ykspf GTHB_MURCI : 19- 25: svekd G-Cpkcl-V fqtsi GTHB_ONCTS : 42- 48: sleke G-Cptcl-V irapi GTHB_ONCTS : 56- 64: apics GhCvtkepV fkspf LSHB_BALAC : 36- 42: tsica GyCpsm--V rvlpa LSHB_BALAC : 36- 44: tsica GyCpsmvrV lpaal LSHB_BALAC : 71- 76: sirlp G-Cppg--V bpmvs LSHB_BOVIN : 56- 64: tsica GyCpsmkrV lpvil LSHB_BOVIN : 91- 96: svrlp G-Cppg--V dpmvs LSHB_CANFA : 53- 59: ttica GyCpsm--V rvlpa LSHB_CANFA : 53- 61: ttica GyCpsmvrV lpaal LSHB_CANFA : 88- 93: sirlp G-Cppg--V dpmvs LSHB_COTJA : 83- 91: ttacg GyCrtrepV yrspl LSHB_EQUAS : 56- 62: tsica GyCrsm--V rvmpa LSHB_EQUAS : 56- 64: tsica GyCrsmvrV mpaal LSHB_EQUAS : 91- 96: sirlp G-Cppg--V dpmvs LSHB_HORSE : 56- 62: tsica GyCpsm--V rvmpa LSHB_HORSE : 56- 64: tsica GyCpsmvrV mpaal LSHB_HORSE : 91- 96: sirlp G-Cppg--V dpmvs LSHB_HUMAN : 42- 49: aveke G-CpvcitV nttic LSHB_HUMAN : 56- 64: ttica GyCptmmrV lqavl LSHB_HUMAN : 91- 96: sirlp G-Cprg--V dpvvs LSHB_MELGA : 75- 83: ttacg GyCrtrepV yrspl LSHB_PHYCA : 36- 42: tsica GyCpsm--V rvlpa LSHB_PHYCA : 36- 44: tsica GyCpsmvrV lpaal LSHB_PHYCA : 71- 76: sirlp G-Cppg--V npmvs LSHB_PIG : 56- 62: tsica GyCpsm--V rvlpa LSHB_PIG : 56- 64: tsica GyCpsmvrV lpaal LSHB_PIG : 91- 96: sirlp G-Cppg--V dptvs LSHB_RANCA : 31- 39: tsict GyCqtmdpV yktal LSHB_RAT : 56- 62: tsica GyCpsm--V rvlpa LSHB_RAT : 56- 64: tsica GyCpsmvrV lpaal LSHB_RAT : 91- 96: svrlp G-Cppg--V dpivs LSHB_SHEEP : 56- 64: tsica GyClsmkrV lpvil LSHB_SHEEP : 91- 96: svrlp G-Cppg--V dpmvs TSHB_ANGAN : 71- 77: lvvqr G-Ctyqa-V eyrta TSHB_ANGAN : 86- 91: taelp G-Cpph--V dprfs TSHB_BOVIN : 49- 56: ttvca GyCmtrd-V ngklf TSHB_BOVIN : 86- 91: taeip G-Cprh--V tpyfs TSHB_HUMAN : 86- 91: tveip G-Cplh--V apyfs TSHB_MOUSE : 86- 91: tveip G-Cphh--V tpyfs TSHB_ONCMY : 71- 77: fliqr G-Ctydq-V eyrtv TSHB_PIG : 86- 91: tveip G-Cphh--V tpyfs TSHB_RAT : 86- 91: tveip G-Cphh--V apyfs Q 17: 8.3401 91( 40) P-x-C Occurences: 91(40) CGHB_HUMAN : 27- 29: keplr PrC rpina CGHB_HUMAN : 44- 46: ekegc PvC itvnt CGHB_HUMAN : 90- 92: esirl PgC prgvn CGHB_PAPAN : 27- 29: replr PlC rpina CGHB_PAPAN : 44- 46: ekeac PvC vtvnt CGHB_PAPAN : 90- 92: esirl PgC ppgvd FSHB_BOVIN : 82- 84: etvkv PgC ahhad FSHB_HORSE : 64- 66: etvkv PgC ahhad FSHB_HUMAN : 82- 84: etvrv PgC ahhad FSHB_PIG : 82- 84: etvkv PgC ahhad FSHB_RAT : 83- 85: etirl PgC arhsd FSHB_SHEEP : 82- 84: etvkv PgC ahhad GTH1_FUNHE : 112- 114: lyahi PsC GTH1_ONCKE : 128- 130: ismat PsC ivnpl GTH1_THUOB : 97- 99: lpgyv PsC psf GTH2_ANGAN : 5- 7: msvy PeC twllf GTH2_ANGAN : 45- 47: ekdgc PkC lvfqt GTH2_ANGAN : 91- 93: etvrl PdC rpgvd GTH2_FUNHE : 25- 27: aafql PrC qllnq GTH2_FUNHE : 88- 90: ktfef PeC vpgvd GTH2_ONCKE : 44- 46: ekegc PtC lviqt GTH2_ONCKE : 52- 54: lviqt PiC sghcv GTH2_ONCKE : 90- 92: etirl PdC ppwvd GTH2_THUOB : 4- 6: fql PpC qlinq GTH2_THUOB : 67- 69: ktfel PdC ppgvd GTHB_CTEID : 33- 35: qssfl PpC epvne GTHB_CTEID : 50- 52: ekegc PkC lvfqt GTHB_CTEID : 96- 98: etvrl PdC ppgvd GTHB_CYPCA : 31- 33: qssyl PpC epvne GTHB_CYPCA : 48- 50: ekegc PkC lvlqt GTHB_CYPCA : 94- 96: etvrl PdC ppgvd GTHB_HYPMO : 28- 30: qssfl PpC epvne GTHB_HYPMO : 45- 47: ekegc PkC lvfqt GTHB_HYPMO : 91- 93: etvrl PdC ppgvd GTHB_MURCI : 21- 23: ekdgc PkC lvfqt GTHB_MURCI : 67- 69: etvrl PdC rpgvd GTHB_ONCTS : 44- 46: ekegc PtC lvira GTHB_ONCTS : 52- 54: lvira PiC sghcv GTHB_ONCTS : 90- 92: emirl PdC ppwsd LSHB_BALAC : 7- 9: rgplr PlC rpina LSHB_BALAC : 24- 26: zbzac PvC itftt LSHB_BALAC : 55- 57: ppvpz PvC tyrzl LSHB_BALAC : 70- 72: asirl PgC ppgvb LSHB_BOVIN : 27- 29: rgplr PlC qpina LSHB_BOVIN : 44- 46: ekeac PvC itftt LSHB_BOVIN : 90- 92: asvrl PgC ppgvd LSHB_CANFA : 24- 26: rgplr PlC rpina LSHB_CANFA : 41- 43: eneac PvC itftt LSHB_CANFA : 72- 74: ppvpq PvC tyhel LSHB_CANFA : 87- 89: asirl PgC ppgvd LSHB_COTJA : 54- 56: ggsgr PpC rpinv LSHB_COTJA : 71- 73: ekeec PqC mavtt LSHB_EQUAS : 27- 29: rgplr PlC rpina LSHB_EQUAS : 44- 46: ekeac PiC itftt LSHB_EQUAS : 75- 77: ppipq PvC tyrel LSHB_EQUAS : 90- 92: gsirl PgC ppgvd LSHB_HORSE : 27- 29: rgplr PlC rpina LSHB_HORSE : 44- 46: ekeac PiC itftt LSHB_HORSE : 75- 77: paipq PvC tyrel LSHB_HORSE : 90- 92: asirl PgC ppgvd LSHB_HUMAN : 27- 29: replr PwC hpina LSHB_HUMAN : 44- 46: ekegc PvC itvnt LSHB_HUMAN : 90- 92: esirl PgC prgvd LSHB_MELGA : 46- 48: ggggr PpC rpinv LSHB_MELGA : 63- 65: ekdec PqC mavtt LSHB_PHYCA : 7- 9: rgplr PlC rpina LSHB_PHYCA : 24- 26: qnzac PvC itftt LSHB_PHYCA : 55- 57: ppvpz PvC tyrql LSHB_PHYCA : 70- 72: asirl PgC ppgvn LSHB_PIG : 27- 29: rgplr PlC rpina LSHB_PIG : 44- 46: eneac PvC itftt LSHB_PIG : 75- 77: ppvpq PvC tyrel LSHB_PIG : 90- 92: asirl PgC ppgvd LSHB_RANCA : 19- 21: ekdhc PvC itftt LSHB_RANCA : 65- 67: dtikl PdC lpgtd LSHB_RAT : 27- 29: rgplr PlC rpvna LSHB_RAT : 44- 46: enefc PvC itftt LSHB_RAT : 75- 77: ppvpq PvC tyrel LSHB_RAT : 90- 92: asvrl PgC ppgvd LSHB_SHEEP : 27- 29: rgplr PlC qpina LSHB_SHEEP : 44- 46: ekeac PvC itftt LSHB_SHEEP : 90- 92: asvrl PgC ppgvd TSHB_ANGAN : 34- 36: lyvek PeC dfcva TSHB_ANGAN : 85- 87: rtael PgC pphvd TSHB_BOVIN : 85- 87: ktaei PgC prhvt TSHB_HUMAN : 85- 87: rtvei PgC plhva TSHB_MOUSE : 85- 87: rtvei PgC phhvt TSHB_ONCMY : 20- 22: fsqav PmC vptdy TSHB_ONCMY : 85- 87: rtvil PgC plhan TSHB_PIG : 85- 87: ktvei PgC phhvt TSHB_RAT : 85- 87: rtvei PgC phhva R 18: 8.3401 53( 40) V-x(5)-C Occurences: 53(40) CGHB_HUMAN : 104- 110: vvsya ValscqC alcrr CGHB_PAPAN : 102- 108: dpmvs VpvalsC rcalc CGHB_PAPAN : 104- 110: mvsvp ValscrC alcrr FSHB_BOVIN : 96- 102: lytyp VatechC skcds FSHB_HORSE : 78- 84: lytyp VatzchC gkcbs FSHB_HUMAN : 96- 102: lytyp VatqchC gkcds FSHB_PIG : 96- 102: lytyp VatechC gkcds FSHB_RAT : 97- 103: lytyp VatechC gkcds FSHB_SHEEP : 96- 102: lytyp VatechC gkcdr GTH1_FUNHE : 74- 80: dwsye VkhiqgC pesit GTH1_FUNHE : 88- 94: sityp VatncyC sacnt GTH1_ONCKE : 22- 28: lwvtp VragteC rygcr GTH1_ONCKE : 104- 110: pffip VakscdC ikckt GTH1_THUOB : 59- 65: dwsye VkhiegC pvgvt GTH1_THUOB : 73- 79: gvtyp VarnceC tacnt GTH2_ANGAN : 49- 55: cpkcl VfqtsiC sghci GTH2_ANGAN : 105- 111: hvtfp ValscdC nlctm GTH2_FUNHE : 102- 108: vvtyp ValscrC ggcam GTH2_ONCKE : 48- 54: cptcl ViqtpiC sghcv GTH2_ONCKE : 104- 110: hvtyp ValscdC slcnm GTH2_THUOB : 81- 87: tvtyp ValschC grcam GTHB_CTEID : 54- 60: cpkcl VfqttiC sghcl GTHB_CTEID : 110- 116: hityp ValscdC slctm GTHB_CYPCA : 52- 58: cpkcl VlqttiC sghcl GTHB_CYPCA : 108- 114: hityp ValscdC slctm GTHB_HYPMO : 49- 55: cpkcl VfqttiC sghcl GTHB_HYPMO : 105- 111: hityp ValscdC slctm GTHB_MURCI : 25- 31: cpkcl VfqtsiC sghci GTHB_MURCI : 81- 87: hvtfp ValscdC nlctm GTHB_ONCTS : 48- 54: cptcl VirapiC sghcv GTHB_ONCTS : 104- 110: hvtyp ValscdC slcnm LSHB_BALAC : 84- 90: mvsfp ValschC gpcrl LSHB_BOVIN : 104- 110: mvsfp ValschC gpcrl LSHB_CANFA : 101- 107: mvsfp ValscrC gpcrl LSHB_COTJA : 131- 137: kvilp ValscrC arcpi LSHB_EQUAS : 104- 110: mvsfp ValschC gpcrl LSHB_HORSE : 104- 110: mvsfp ValschC gpcqi LSHB_HUMAN : 104- 110: vvsfp ValscrC gpcrr LSHB_MELGA : 123- 129: rvllp ValscrC arcpi LSHB_PHYCA : 84- 90: mvsfp ValschC gpcrl LSHB_PIG : 104- 110: tvsfp ValschC gpcrl LSHB_RANCA : 79- 85: fftyp ValscyC dlckm LSHB_RAT : 104- 110: ivsfp ValscrC gpcrl LSHB_SHEEP : 104- 110: mvsfp ValschC gpcrl TSHB_ANGAN : 99- 105: rfsyp ValhctC racdp TSHB_BOVIN : 99- 105: yfsyp VaisckC gkcnt TSHB_HUMAN : 99- 105: yfsyp ValsckC gkcnt TSHB_MOUSE : 9- 15: avlls VlfalaC gqaas TSHB_MOUSE : 99- 105: yfsfp VavsckC gkcnt TSHB_ONCMY : 99- 105: lftyp ValschC gtcnt TSHB_PIG : 99- 105: yfsyp VaisckC gkcnt TSHB_RAT : 9- 15: vvlfs VlfalaC eqvss TSHB_RAT : 99- 105: yfsyp ValsckC gkcnt S 19: 8.3401 55( 40) C-x-G Occurences: 55(40) CGHB_HUMAN : 54- 56: vntti CaG ycptm CGHB_HUMAN : 120- 122: rsttd CgG pkdhp CGHB_PAPAN : 54- 56: vntti CaG ycptm CGHB_PAPAN : 120- 122: rstsd CgG pkdhp FSHB_BOVIN : 46- 48: inttw CaG ycytr FSHB_HORSE : 28- 30: inttw CaG ycytr FSHB_HUMAN : 46- 48: inttw CaG ycytr FSHB_PIG : 46- 48: inttw CaG ycytr FSHB_RAT : 47- 49: inttw CeG ycytr FSHB_SHEEP : 46- 48: inttw CaG ycytr GTH1_FUNHE : 17- 19: laevg CfG chlkn GTH1_FUNHE : 43- 45: ihtti CeG lcfse GTH1_FUNHE : 66- 68: pehrv CnG dwsye GTH1_ONCKE : 46- 48: vered ChG sitit GTH1_ONCKE : 55- 57: ititt CaG lcett GTH1_THUOB : 31- 33: iltti CeG qcyle GTH1_THUOB : 51- 53: deqki CnG dwsye GTH2_ANGAN : 55- 57: fqtsi CsG hcitk GTH2_FUNHE : 41- 43: lekrg CsG chrve GTH2_FUNHE : 52- 54: vetti CsG ycatk GTH2_FUNHE : 108- 110: alscr CgG camat GTH2_ONCKE : 54- 56: iqtpi CsG hcvtk GTH2_THUOB : 31- 33: vetti CsG hcitk GTHB_CTEID : 60- 62: fqtti CsG hcltk GTHB_CYPCA : 58- 60: lqtti CsG hcltk GTHB_HYPMO : 55- 57: fqtti CsG hcltk GTHB_MURCI : 31- 33: fqtsi CsG hcitk GTHB_ONCTS : 54- 56: irapi CsG hcvtk LSHB_BALAC : 34- 36: fttsi CaG ycpsm LSHB_BOVIN : 54- 56: fttsi CaG ycpsm LSHB_BOVIN : 120- 122: lsstd CgG prtqp LSHB_CANFA : 51- 53: fttti CaG ycpsm LSHB_CANFA : 117- 119: lsnsd CgG praqs LSHB_COTJA : 81- 83: vttta CgG ycrtr LSHB_EQUAS : 54- 56: fttsi CaG ycrsm LSHB_EQUAS : 120- 122: lkttd CgG prdhp LSHB_HORSE : 54- 56: fttsi CaG ycpsm LSHB_HUMAN : 54- 56: vntti CaG ycptm LSHB_HUMAN : 120- 122: rstsd CgG pkdhp LSHB_MELGA : 73- 75: vttta CgG ycrtr LSHB_PHYCA : 34- 36: fttsi CaG ycpsm LSHB_PIG : 54- 56: fttsi CaG ycpsm LSHB_PIG : 120- 122: lsssd CgG praqp LSHB_RANCA : 29- 31: fttsi CtG ycqtm LSHB_RAT : 54- 56: fttsi CaG ycpsm LSHB_RAT : 120- 122: lsssd CgG prtqp LSHB_SHEEP : 54- 56: fttsi CaG yclsm LSHB_SHEEP : 120- 122: lsstd CgG prtqp TSHB_ANGAN : 47- 49: intti CmG fcysl TSHB_BOVIN : 47- 49: inttv CaG ycmtr TSHB_HUMAN : 47- 49: intti CaG ycmtr TSHB_MOUSE : 47- 49: intti CaG ycmtr TSHB_ONCMY : 47- 49: intti CmG fcysr TSHB_PIG : 47- 49: intti CaG ycmtr TSHB_RAT : 47- 49: intti CaG ycmtr T 20: 8.3401 65( 40) G-x-C Occurences: 65(40) CGHB_HUMAN : 56- 58: ttica GyC ptmtr CGHB_PAPAN : 56- 58: ttica GyC ptmmr FSHB_BOVIN : 36- 38: ekeec GfC isint FSHB_BOVIN : 48- 50: ttwca GyC ytrdl FSHB_HORSE : 30- 32: ttwca GyC ytrdl FSHB_HORSE : 85- 87: tzchc GkC bsdst FSHB_HUMAN : 48- 50: ttwca GyC ytrdl FSHB_HUMAN : 103- 105: tqchc GkC dsdst FSHB_PIG : 48- 50: ttwca GyC ytrdl FSHB_PIG : 103- 105: techc GkC dsdst FSHB_RAT : 49- 51: ttwce GyC ytrdl FSHB_RAT : 104- 106: techc GkC dsdst FSHB_SHEEP : 48- 50: ttwca GyC ytrdl FSHB_SHEEP : 103- 105: techc GkC drdst GTH1_FUNHE : 45- 47: ttice GlC fseda GTH1_ONCKE : 57- 59: ittca GlC ettdl GTH1_ONCKE : 76- 78: lprsq GvC nfkew GTH1_THUOB : 33- 35: ttice GqC yledp GTH2_ANGAN : 57- 59: tsics GhC itkdp GTH2_FUNHE : 54- 56: ttics GyC atkdp GTH2_FUNHE : 109- 111: lscrc GgC amats GTH2_ONCKE : 56- 58: tpics GhC vtkep GTH2_THUOB : 33- 35: ttics GhC itkdp GTH2_THUOB : 88- 90: lschc GrC amdts GTHB_CTEID : 62- 64: ttics GhC ltkep GTHB_CYPCA : 60- 62: ttics GhC ltkep GTHB_HYPMO : 57- 59: ttics GhC ltkep GTHB_MURCI : 33- 35: tsics GhC itkdp GTHB_ONCTS : 56- 58: apics GhC vtkep LSHB_BALAC : 36- 38: tsica GyC psmvr LSHB_BALAC : 91- 93: lschc GpC rlsss LSHB_BOVIN : 56- 58: tsica GyC psmkr LSHB_BOVIN : 111- 113: lschc GpC rlsst LSHB_CANFA : 53- 55: ttica GyC psmvr LSHB_CANFA : 108- 110: lscrc GpC rlsns LSHB_COTJA : 83- 85: ttacg GyC rtrep LSHB_EQUAS : 56- 58: tsica GyC rsmvr LSHB_EQUAS : 111- 113: lschc GpC rlktt LSHB_HORSE : 56- 58: tsica GyC psmvr LSHB_HORSE : 111- 113: lschc GpC qiktt LSHB_HUMAN : 56- 58: ttica GyC ptmmr LSHB_HUMAN : 111- 113: lscrc GpC rrsts LSHB_MELGA : 75- 77: ttacg GyC rtrep LSHB_PHYCA : 36- 38: tsica GyC psmvr LSHB_PHYCA : 91- 93: lschc GpC rlsss LSHB_PIG : 56- 58: tsica GyC psmvr LSHB_PIG : 111- 113: lschc GpC rlsss LSHB_RANCA : 31- 33: tsict GyC qtmdp LSHB_RAT : 56- 58: tsica GyC psmvr LSHB_RAT : 111- 113: lscrc GpC rlsss LSHB_SHEEP : 56- 58: tsica GyC lsmkr LSHB_SHEEP : 111- 113: lschc GpC rlsst TSHB_ANGAN : 49- 51: tticm GfC ysldp TSHB_BOVIN : 49- 51: ttvca GyC mtrdv TSHB_BOVIN : 106- 108: isckc GkC ntdys TSHB_HUMAN : 49- 51: ttica GyC mtrdi TSHB_HUMAN : 106- 108: lsckc GkC ntdys TSHB_MOUSE : 49- 51: ttica GyC mtrdi TSHB_MOUSE : 106- 108: vsckc GkC ntdns TSHB_ONCMY : 49- 51: tticm GfC ysrds TSHB_ONCMY : 106- 108: lschc GtC ntdsd TSHB_PIG : 49- 51: ttica GyC mtrdf TSHB_PIG : 106- 108: isckc GkC ntdys TSHB_RAT : 49- 51: ttica GyC mtrdi TSHB_RAT : 106- 108: lsckc GkC ntdys Number of patterns evaluated by Pratt:223 Total running time: 1 seconds