------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 26 sequences from file GLYCOSYL_HYDROL_F32 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 26 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename GLYCOSYL_HYDROL_F32.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CSCA_ECOLI 477 INU1_KLUMA 555 INV1_HANAN 550 INV1_LYCES 636 INV1_YEAST 532 INV2_YEAST 532 INV3_YEAST 74 INV4_YEAST 532 INV5_YEAST 74 INV7_YEAST 96 INVA_DAUCA 592 INVA_PHAAU 649 INVA_ZYMMO 512 INVB_DAUCA 52 INV_SCHOC 533 RAFD_ECOLI 476 SACC_BACSU 677 SCRB_BACSU 480 SCRB_KLEPN 466 SCRB_LACLA 473 SCRB_PEDPE 501 SCRB_SALTY 466 SCRB_STAXY 494 SCRB_STRMU 454 SCRB_VIBAL 484 SCRB_ZYMMO 511 Pratt run started at Thu Feb 6 19:41:13 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 11.5102 42( 26) P-x(1,2)-G-x(0,1)-L 2: 11.0102 32( 26) G-x(2,4)-L-x(1,2)-W 3: 10.5102 33( 26) G-x(2,4)-L-x(0,2)-W 4: 10.5102 57( 26) G-x(1,3)-D-x(0,2)-G 5: 8.3401 52( 26) Q-x(2)-P 6: 8.3401 96( 26) G-x-A 7: 8.3401 51( 26) K-x-W 8: 8.3401 64( 26) P-x(5)-G 9: 8.3401 53( 26) N-x-P 10: 8.3401 53( 26) N-x(5)-L 11: 8.3401 86( 26) L-x(5)-E 12: 8.3401 84( 26) L-L 13: 8.3401 90( 26) L-x(2)-G 14: 8.3401 85( 26) G-x(2)-L 15: 8.3401 78( 26) D-x(3)-L 16: 8.3401 82( 26) P-x-G 17: 8.3401 75( 26) D-P 18: 7.8401 69( 26) S-x(1,2)-P 19: 7.8401 81( 26) V-x(3,4)-P 20: 7.8401 107( 26) A-x(3,4)-S Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 14.7348 29( 26) D-P-[NT]-[GT] B 2: 14.5938 32( 26) N-[ADEGNQT]-P-[DENT]-[DGS] C 3: 11.5102 42( 26) P-x(1,2)-G-x(0,1)-L D 4: 11.0102 32( 26) G-x(2,4)-L-x(1,2)-W E 5: 10.9306 46( 26) P-[DNQ]-G F 6: 10.5102 33( 26) G-x(2,4)-L-x(0,2)-W G 7: 10.5102 57( 26) G-x(1,3)-D-x(0,2)-G H 8: 10.2380 41( 26) L-L-x(4)-[ADEGS] I 9: 9.7607 73( 26) G-x-A-x(3)-[ADEGNST] J 10: 8.3401 52( 26) Q-x(2)-P K 11: 8.3401 51( 26) K-x-W L 12: 8.3401 64( 26) P-x(5)-G M 13: 8.3401 53( 26) N-x(5)-L N 14: 8.3401 86( 26) L-x(5)-E O 15: 8.3401 90( 26) L-x(2)-G P 16: 8.3401 85( 26) G-x(2)-L Q 17: 8.3401 78( 26) D-x(3)-L R 18: 7.8401 69( 26) S-x(1,2)-P S 19: 7.8401 81( 26) V-x(3,4)-P T 20: 7.8401 107( 26) A-x(3,4)-S Best patterns with alignements: fitness hits(seqs) Pattern A 1: 14.7348 29( 26) D-P-[NT]-[GT] Occurences: 29(26) CSCA_ECOLI : 39- 42: agwmn DPNG liwfn INU1_KLUMA : 53- 56: hgwmn DPNG lwyda INV1_HANAN : 42- 45: qgwmn DPNG mfydr INV1_LYCES : 118- 121: knwmn DPNG plyhk INV1_LYCES : 242- 245: vkdfr DPTT awtgp INV1_YEAST : 42- 45: kgwmn DPNG lwyda INV2_YEAST : 42- 45: kgwmn DPNG lwyde INV3_YEAST : 42- 45: kgwmn DPNG lwyda INV4_YEAST : 42- 45: kgwmn DPNG lwyda INV5_YEAST : 42- 45: kgwmn DPNG lwyda INV7_YEAST : 42- 45: kgwmn DPNG lwyda INVA_DAUCA : 74- 77: qnwin DPNG pmyyk INVA_DAUCA : 201- 204: atafr DPTT awldk INVA_PHAAU : 130- 133: knwmn DPNG pmyyk INVA_PHAAU : 254- 257: akdfr DPTT awlts INVA_ZYMMO : 43- 46: tgwmn DPNG liffk INVB_DAUCA : 13- 16: dasyx DPTT awigp INV_SCHOC : 50- 53: kgwmn DPNG lfydk RAFD_ECOLI : 38- 41: agwmn DPNG liyfn SACC_BACSU : 49- 52: anwmn DPNG mvyya SCRB_BACSU : 43- 46: vglln DPNG viywk SCRB_KLEPN : 41- 44: nglln DPNG fcqva SCRB_LACLA : 47- 50: tglln DPNG fsyfn SCRB_PEDPE : 47- 50: sglln DPNG fsyfd SCRB_SALTY : 41- 44: tglmn DPNG fiefa SCRB_STAXY : 48- 51: iglln DPNG liyfk SCRB_STRMU : 47- 50: tglln DPNG fsyfn SCRB_VIBAL : 51- 54: fglln DPNG lcyfn SCRB_ZYMMO : 43- 46: tswmn DPNG liffk B 2: 14.5938 32( 26) N-[ADEGNQT]-P-[DENT]-[DGS] Occurences: 32(26) CSCA_ECOLI : 38- 42: pagwm NDPNG liwfn INU1_KLUMA : 52- 56: shgwm NDPNG lwyda INV1_HANAN : 41- 45: dqgwm NDPNG mfydr INV1_LYCES : 117- 121: qknwm NDPNG plyhk INV1_YEAST : 41- 45: nkgwm NDPNG lwyda INV1_YEAST : 134- 138: aiwty NTPES eeqyi INV2_YEAST : 41- 45: nkgwm NDPNG lwyde INV2_YEAST : 134- 138: aiwty NTPES eeqyi INV3_YEAST : 41- 45: nkgwm NDPNG lwyda INV4_YEAST : 41- 45: nkgwm NDPNG lwyda INV4_YEAST : 134- 138: aiwty NTPES eeqyi INV5_YEAST : 41- 45: nkgwm NDPNG lwyda INV7_YEAST : 41- 45: nkgwm NDPNG lwyda INVA_DAUCA : 73- 77: kqnwi NDPNG pmyyk INVA_PHAAU : 129- 133: eknwm NDPNG pmyyk INVA_ZYMMO : 42- 46: ltgwm NDPNG liffk INVB_DAUCA : 35- 39: igesd NEPTD vlkgw INV_SCHOC : 49- 53: ekgwm NDPNG lfydk RAFD_ECOLI : 37- 41: pagwm NDPNG liyfn SACC_BACSU : 48- 52: eanwm NDPNG mvyya SCRB_BACSU : 42- 46: pvgll NDPNG viywk SCRB_KLEPN : 40- 44: vngll NDPNG fcqva SCRB_LACLA : 46- 50: etgll NDPNG fsyfn SCRB_LACLA : 295- 299: atqsf NAPDG sayai SCRB_PEDPE : 46- 50: tsgll NDPNG fsyfd SCRB_PEDPE : 292- 296: atqai NAPDG ralav SCRB_SALTY : 40- 44: vtglm NDPNG fiefa SCRB_STAXY : 47- 51: qigll NDPNG liyfk SCRB_STRMU : 46- 50: ktgll NDPNG fsyfn SCRB_STRMU : 268- 272: atqaf NAPDG rvyav SCRB_VIBAL : 50- 54: kfgll NDPNG lcyfn SCRB_ZYMMO : 42- 46: ltswm NDPNG liffk C 3: 11.5102 42( 26) P-x(1,2)-G-x(0,1)-L Occurences: 42(26) CSCA_ECOLI : 40- 43: gwmnd Pn-G-L iwfnd INU1_KLUMA : 54- 57: gwmnd Pn-G-L wydak INU1_KLUMA : 273- 277: fvsin Pg-GpL ggsvt INU1_KLUMA : 409- 413: ikldn Ps-GsL efhle INV1_HANAN : 300- 305: fdnte PedGaL glawa INV1_LYCES : 119- 123: nwmnd Pn-GpL yhkgw INV1_YEAST : 43- 46: gwmnd Pn-G-L wydak INV2_YEAST : 43- 46: gwmnd Pn-G-L wydek INV3_YEAST : 43- 46: gwmnd Pn-G-L wydak INV4_YEAST : 43- 46: gwmnd Pn-G-L wydak INV5_YEAST : 43- 46: gwmnd Pn-G-L wydak INV7_YEAST : 43- 46: gwmnd Pn-G-L wydak INVA_DAUCA : 463- 466: qggvg Pf-G-L ltlas INVA_DAUCA : 463- 467: qggvg Pf-GlL tlase INVA_PHAAU : 512- 515: rgalg Pf-G-L lvlad INVA_PHAAU : 512- 516: rgalg Pf-GlL vlade INVA_ZYMMO : 44- 47: gwmnd Pn-G-L iffkg INVA_ZYMMO : 246- 249: vlmfs Pq-G-L kasgy INVB_DAUCA : 21- 25: tawig Pd-GkL lwgwi INV_SCHOC : 51- 54: gwmnd Pn-G-L fydkt RAFD_ECOLI : 39- 42: gwmnd Pn-G-L iyfng RAFD_ECOLI : 403- 407: lwryy PeeG-L dgyrs SACC_BACSU : 68- 71: fyqyh Py-G-L qwgpm SCRB_BACSU : 36- 40: hfhim PpvG-L lndpn SCRB_BACSU : 36- 41: hfhim PpvGlL ndpng SCRB_BACSU : 37- 40: fhimp Pv-G-L lndpn SCRB_BACSU : 37- 41: fhimp Pv-GlL ndpng SCRB_BACSU : 238- 241: vlivs Pq-G-L eadgf SCRB_KLEPN : 34- 38: qwhla PvnG-L lndpn SCRB_KLEPN : 34- 39: qwhla PvnGlL ndpng SCRB_KLEPN : 235- 238: llicc Pq-G-L areaq SCRB_LACLA : 40- 44: nfhie PetG-L lndpn SCRB_LACLA : 40- 45: nfhie PetGlL ndpng SCRB_LACLA : 69- 73: hfpfg PvhG-L kswvh SCRB_LACLA : 241- 244: vlvfc Pq-G-L dksiv SCRB_PEDPE : 40- 44: qhhiq PtsG-L lndpn SCRB_PEDPE : 40- 45: qhhiq PtsGlL ndpng SCRB_PEDPE : 69- 73: vfpfg PvhG-L kswqh SCRB_PEDPE : 224- 228: ymiec PksG-L drsta SCRB_SALTY : 34- 38: rwhha PvtG-L mndpn SCRB_STAXY : 41- 45: tfhiq PqiG-L lndpn SCRB_STAXY : 41- 46: tfhiq PqiGlL ndpng SCRB_STAXY : 49- 52: gllnd Pn-G-L iyfkg SCRB_STAXY : 70- 74: wfplg PvhG-L kywyt SCRB_STRMU : 40- 44: tyhie PktG-L lndpn SCRB_STRMU : 40- 45: tyhie PktGlL ndpng SCRB_STRMU : 215- 218: vliys Pq-G-L sksel SCRB_VIBAL : 44- 48: sfhia PkfG-L lndpn SCRB_VIBAL : 44- 49: sfhia PkfGlL ndpng SCRB_VIBAL : 52- 55: gllnd Pn-G-L cyfng SCRB_ZYMMO : 44- 47: swmnd Pn-G-L iffkg SCRB_ZYMMO : 246- 249: vlmfs Pq-G-L kasgy D 4: 11.0102 32( 26) G-x(2,4)-L-x(1,2)-W Occurences: 32(26) CSCA_ECOLI : 191- 197: illyr Gss--LreW tfdrv INU1_KLUMA : 80- 85: aatiw Gtp--Ly-W ghavs INV1_HANAN : 199- 206: kvqiy Gspd-LkkW dlksn INV1_HANAN : 303- 309: teped Galg-La-W asnwq INV1_LYCES : 420- 426: ydkkt Gthl-Lq-W pveei INV1_LYCES : 420- 426: ydkkt Gth--LlqW pveei INV1_YEAST : 69- 74: ndtvw Glp--Lf-W ghats INV2_YEAST : 69- 74: ndtvw Gtp--Lf-W ghats INV3_YEAST : 69- 74: ndtvw Glp--Lf-W INV4_YEAST : 69- 74: ndtvw Glp--Lf-W ghats INV5_YEAST : 69- 74: ndtvw Glp--Lf-W INV7_YEAST : 69- 74: ndtvw Glp--Lf-W vnmtt INVA_DAUCA : 377- 383: wldps Gkq--LmqW pieel INVA_PHAAU : 431- 437: ldtkt Gsnl-Lq-W pvdev INVA_PHAAU : 431- 437: ldtkt Gsn--LlqW pvdev INVA_ZYMMO : 263- 269: nlfqn Gyi--LgkW qapqf INVA_ZYMMO : 300- 307: fedkd Grqi-LiaW fdmwe INVB_DAUCA : 20- 27: ttawi GpdgkLl-W gwige INVB_DAUCA : 23- 29: wigpd Gkl--LwgW igesd INV_SCHOC : 77- 82: nataw Gqp--Ly-W ghats INV_SCHOC : 207- 214: kiqif Gsan-LknW vlnsn INV_SCHOC : 304- 310: seveh Gvlg-La-W asnwq RAFD_ECOLI : 190- 196: vllyr Gts--LrdW hlehv SACC_BACSU : 657- 664: svfse Gqfg-LnvW datav SCRB_BACSU : 293- 300: leddq Grri-LfaW mavpd SCRB_KLEPN : 290- 297: mqadd Grrl-LvgW mgvpd SCRB_LACLA : 68- 76: qhfpf GpvhgLksW vhlvs SCRB_PEDPE : 68- 76: qvfpf GpvhgLksW qhvts SCRB_SALTY : 290- 297: mltsd Grrl-LvgW mgvpe SCRB_STAXY : 69- 77: qwfpl GpvhgLkyW ytyqs SCRB_STAXY : 295- 302: flden Gqri-LigW mglpd SCRB_STRMU : 68- 76: qnwpf GaahgLksW ihtes SCRB_VIBAL : 298- 305: yldes Grri-LiaW iglpe SCRB_ZYMMO : 263- 269: nlfqn Gyi--LgkW qapqf E 5: 10.9306 46( 26) P-[DNQ]-G Occurences: 46(26) CSCA_ECOLI : 40- 42: gwmnd PNG liwfn CSCA_ECOLI : 232- 234: ylmfs PQG mnaeg CSCA_ECOLI : 417- 419: rsipl PQG dmlal INU1_KLUMA : 54- 56: gwmnd PNG lwyda INV1_HANAN : 43- 45: gwmnd PNG mfydr INV1_LYCES : 119- 121: nwmnd PNG plyhk INV1_LYCES : 185- 187: satil PDG qimml INV1_YEAST : 43- 45: gwmnd PNG lwyda INV2_YEAST : 43- 45: gwmnd PNG lwyde INV3_YEAST : 43- 45: gwmnd PNG lwyda INV4_YEAST : 43- 45: gwmnd PNG lwyda INV5_YEAST : 43- 45: gwmnd PNG lwyda INV7_YEAST : 43- 45: gwmnd PNG lwyda INVA_DAUCA : 75- 77: nwind PNG pmyyk INVA_PHAAU : 131- 133: nwmnd PNG pmyyk INVA_PHAAU : 149- 151: fyqyn PNG avwgd INVA_PHAAU : 197- 199: satil PNG eiiml INVA_ZYMMO : 44- 46: gwmnd PNG liffk INVA_ZYMMO : 246- 248: vlmfs PQG lkasg INVB_DAUCA : 21- 23: tawig PDG kllwg INV_SCHOC : 51- 53: gwmnd PNG lfydk RAFD_ECOLI : 39- 41: gwmnd PNG liyfn RAFD_ECOLI : 231- 233: wlmfs PQG mnpsg SACC_BACSU : 50- 52: nwmnd PNG mvyya SCRB_BACSU : 44- 46: gllnd PNG viywk SCRB_BACSU : 238- 240: vlivs PQG leadg SCRB_KLEPN : 42- 44: gllnd PNG fcqva SCRB_KLEPN : 122- 124: gnvkf PDG grtaw SCRB_KLEPN : 235- 237: llicc PQG larea SCRB_KLEPN : 301- 303: gwmgv PDG demhq SCRB_LACLA : 48- 50: gllnd PNG fsyfn SCRB_LACLA : 241- 243: vlvfc PQG ldksi SCRB_LACLA : 297- 299: qsfna PDG sayai SCRB_PEDPE : 48- 50: gllnd PNG fsyfd SCRB_PEDPE : 294- 296: qaina PDG ralav SCRB_SALTY : 42- 44: glmnd PNG fiefa SCRB_SALTY : 235- 237: ilicc PQG iaree SCRB_STAXY : 49- 51: gllnd PNG liyfk SCRB_STAXY : 240- 242: mllfc PQG idseg SCRB_STRMU : 48- 50: gllnd PNG fsyfn SCRB_STRMU : 215- 217: vliys PQG lskse SCRB_STRMU : 270- 272: qafna PDG rvyav SCRB_VIBAL : 52- 54: gllnd PNG lcyfn SCRB_VIBAL : 240- 242: vmlfs PQG vsssn SCRB_ZYMMO : 44- 46: swmnd PNG liffk SCRB_ZYMMO : 246- 248: vlmfs PQG lkasg F 6: 10.5102 33( 26) G-x(2,4)-L-x(0,2)-W Occurences: 33(26) CSCA_ECOLI : 191- 197: illyr Gss--LreW tfdrv INU1_KLUMA : 80- 85: aatiw Gtp--Ly-W ghavs INV1_HANAN : 199- 206: kvqiy Gspd-LkkW dlksn INV1_HANAN : 303- 309: teped Galg-La-W asnwq INV1_LYCES : 420- 426: ydkkt Gthl-Lq-W pveei INV1_LYCES : 420- 426: ydkkt Gth--LlqW pveei INV1_YEAST : 69- 74: ndtvw Glp--Lf-W ghats INV2_YEAST : 69- 74: ndtvw Gtp--Lf-W ghats INV3_YEAST : 69- 74: ndtvw Glp--Lf-W INV4_YEAST : 69- 74: ndtvw Glp--Lf-W ghats INV5_YEAST : 69- 74: ndtvw Glp--Lf-W INV7_YEAST : 69- 74: ndtvw Glp--Lf-W vnmtt INVA_DAUCA : 377- 383: wldps Gkq--LmqW pieel INVA_PHAAU : 431- 437: ldtkt Gsnl-Lq-W pvdev INVA_PHAAU : 431- 437: ldtkt Gsn--LlqW pvdev INVA_ZYMMO : 263- 269: nlfqn Gyi--LgkW qapqf INVA_ZYMMO : 300- 307: fedkd Grqi-LiaW fdmwe INVB_DAUCA : 20- 27: ttawi GpdgkLl-W gwige INVB_DAUCA : 23- 27: wigpd Gkl--L--W gwige INVB_DAUCA : 23- 29: wigpd Gkl--LwgW igesd INV_SCHOC : 77- 82: nataw Gqp--Ly-W ghats INV_SCHOC : 207- 214: kiqif Gsan-LknW vlnsn INV_SCHOC : 304- 310: seveh Gvlg-La-W asnwq RAFD_ECOLI : 190- 196: vllyr Gts--LrdW hlehv RAFD_ECOLI : 394- 399: vdnqa Grli-L--W ryype SACC_BACSU : 657- 664: svfse Gqfg-LnvW datav SCRB_BACSU : 293- 300: leddq Grri-LfaW mavpd SCRB_KLEPN : 290- 297: mqadd Grrl-LvgW mgvpd SCRB_LACLA : 68- 76: qhfpf GpvhgLksW vhlvs SCRB_PEDPE : 68- 76: qvfpf GpvhgLksW qhvts SCRB_SALTY : 290- 297: mltsd Grrl-LvgW mgvpe SCRB_STAXY : 69- 77: qwfpl GpvhgLkyW ytyqs SCRB_STAXY : 295- 302: flden Gqri-LigW mglpd SCRB_STRMU : 68- 76: qnwpf GaahgLksW ihtes SCRB_VIBAL : 298- 305: yldes Grri-LiaW iglpe SCRB_ZYMMO : 263- 269: nlfqn Gyi--LgkW qapqf G 7: 10.5102 57( 26) G-x(1,3)-D-x(0,2)-G Occurences: 57(26) CSCA_ECOLI : 35- 42: lappa GwmnDpnG liwfn CSCA_ECOLI : 89- 96: ialap GdenDkdG cfsgs CSCA_ECOLI : 100- 107: dgcfs GsavDdnG vlsli CSCA_ECOLI : 176- 181: wwmvv Gak-Dp-G ntgqi INU1_KLUMA : 49- 56: ftpsh GwmnDpnG lwyda INU1_KLUMA : 104- 111: ygasl GpgsDdaG afsgs INU1_KLUMA : 106- 111: aslgp Gsd-Da-G afsgs INU1_KLUMA : 106- 111: aslgp Gs--DdaG afsgs INU1_KLUMA : 193- 196: hegen Ge--D--G rwima INV1_HANAN : 38- 45: ltpdq GwmnDpnG mfydr INV1_HANAN : 266- 270: neyfi Gdf-D--G ttfhp INV1_LYCES : 340- 345: dhyai Gty-Dl-G knkwt INV1_LYCES : 361- 367: ldcgi GlrlDy-G kyyas INV1_LYCES : 526- 529: fyisk Ga--D--G raeth INV1_YEAST : 38- 45: ftpnk GwmnDpnG lwyda INV2_YEAST : 38- 45: ftpnk GwmnDpnG lwyde INV3_YEAST : 38- 45: ftpnk GwmnDpnG lwyda INV4_YEAST : 38- 45: ftpnk GwmnDpnG lwyda INV5_YEAST : 38- 45: ftpnk GwmnDpnG lwyda INV7_YEAST : 38- 45: ftpnk GwmnDpnG lwyda INVA_DAUCA : 319- 325: vdgwa GlryDy-G nfyas INVA_PHAAU : 372- 378: ndvgv GlryDy-G ifyas INVA_ZYMMO : 39- 46: vtplt GwmnDpnG liffk INVA_ZYMMO : 93- 100: valap GdsfDrdG cfsgc INVA_ZYMMO : 104- 111: dgcfs GcavDnnG iltli INVB_DAUCA : 20- 23: ttawi Gp--D--G kllwg INV_SCHOC : 46- 53: ftpek GwmnDpnG lfydk INV_SCHOC : 101- 108: heiai GpehDneG ifsgs INV_SCHOC : 269- 273: nqyfv Gdf-D--G fqfvp RAFD_ECOLI : 34- 41: lappa GwmnDpnG liyfn RAFD_ECOLI : 88- 95: valap GdkyDrdG cfsgs RAFD_ECOLI : 99- 106: dgcfs GsavDddG vlsli RAFD_ECOLI : 406- 409: yypee Gl--D--G yrsve SACC_BACSU : 212- 216: yasef Gq--Dq-G shggv SACC_BACSU : 263- 267: mqyfv Gdf-D--G thfkn SACC_BACSU : 470- 473: svevf Gn--D--G kqvit SACC_BACSU : 541- 545: iegkq Grs-D--G dsfil SCRB_BACSU : 39- 46: imppv GllnDpnG viywk SCRB_BACSU : 119- 126: ylfyt GnvrDqdG nrety SCRB_BACSU : 212- 217: gagfn Gld-Df-G ymwec SCRB_BACSU : 212- 217: gagfn Gl--DdfG ymwec SCRB_BACSU : 240- 245: ivspq GleaD--G fryqn SCRB_KLEPN : 37- 44: lapvn GllnDpnG fcqva SCRB_KLEPN : 204- 209: vgeia Gh--DvnG lanag SCRB_KLEPN : 263- 268: fdaer Gif-Dh-G plhel SCRB_KLEPN : 299- 303: lvgwm Gvp-D--G demhq SCRB_KLEPN : 373- 378: pdstl Gl--DfaG alqlt SCRB_LACLA : 43- 50: iepet GllnDpnG fsyfn SCRB_PEDPE : 43- 50: iqpts GllnDpnG fsyfd SCRB_SALTY : 37- 44: hapvt GlmnDpnG fiefa SCRB_SALTY : 102- 109: ngcys GsavDnnG tltlc SCRB_SALTY : 209- 214: ghgin Gld-Dv-G ymwec SCRB_SALTY : 209- 214: ghgin Gl--DdvG ymwec SCRB_STAXY : 44- 51: iqpqi GllnDpnG liyfk SCRB_STAXY : 242- 247: lfcpq Gi--DseG erfkn SCRB_STRMU : 43- 50: iepkt GllnDpnG fsyfn SCRB_STRMU : 138- 145: hplqi GafmDkkG niqkf SCRB_VIBAL : 47- 54: iapkf GllnDpnG lcyfn SCRB_ZYMMO : 93- 100: valap GdsfDrdG cfsgc SCRB_ZYMMO : 104- 111: dgcfs GcavDnnG vltli H 8: 10.2380 41( 26) L-L-x(4)-[ADEGS] Occurences: 41(26) CSCA_ECOLI : 187- 193: ntgqi LLyrgsS lrewt INU1_KLUMA : 7- 13: kfays LLlplaG vsasv INV1_HANAN : 8- 14: qlspl LLlplfS vfnsi INV1_HANAN : 247- 253: skwvl LLainpG splgg INV1_LYCES : 17- 23: asryt LLpdqpD sghrk INV1_LYCES : 423- 429: ktgth LLqwpvE eiesl INV1_LYCES : 453- 459: pgsie LLrvdsA aeldi INV1_YEAST : 9- 15: qaflf LLagfaA kisas INV2_YEAST : 9- 15: qaflf LLagfaA kisas INV3_YEAST : 9- 15: qafif LLagfaA kisal INV4_YEAST : 9- 15: qafif LLagfaA kisal INV5_YEAST : 9- 15: qafif LLagfaA kisal INV7_YEAST : 9- 15: qafif LLagfaA kisal INVA_DAUCA : 466- 472: vgpfg LLtlasE kleey INVA_PHAAU : 24- 30: strkd LLfvlcG llfls INVA_PHAAU : 93- 99: ekssn LLfageG gasea INVA_PHAAU : 297- 303: elkeg LLravpG tgmwe INVA_PHAAU : 434- 440: ktgsn LLqwpvD evesl INVA_PHAAU : 515- 521: lgpfg LLvladE glsey INVA_ZYMMO : 406- 412: kgqet LLyidrS qnrii INVB_DAUCA : 25- 31: gpdgk LLwgwiG esdne INV_SCHOC : 12- 18: vlvip LLtlffG yvass RAFD_ECOLI : 186- 192: dngqv LLyrgtS lrdwh SACC_BACSU : 15- 21: imftl LLtmafS adaad SCRB_BACSU : 40- 46: mppvg LLndpnG viywk SCRB_KLEPN : 38- 44: apvng LLndpnG fcqva SCRB_KLEPN : 78- 84: wssad LLhwrhE pialm SCRB_KLEPN : 186- 192: qrgkv LLftasD lrewr SCRB_KLEPN : 293- 299: ddgrr LLvgwmG vpdgd SCRB_LACLA : 44- 50: epetg LLndpnG fsyfn SCRB_PEDPE : 44- 50: qptsg LLndpnG fsyfd SCRB_PEDPE : 371- 377: ngsfe LLltvpA dktvt SCRB_PEDPE : 372- 378: gsfel LLtvpaD ktvtv SCRB_SALTY : 78- 84: wssid LLhwqhE pialm SCRB_SALTY : 186- 192: krgkv LLfssaD lhqwt SCRB_SALTY : 293- 299: sdgrr LLvgwmG vpege SCRB_STAXY : 45- 51: qpqig LLndpnG liyfk SCRB_STAXY : 236- 242: ngydm LLfcpqG idseg SCRB_STRMU : 44- 50: epktg LLndpnG fsyfn SCRB_VIBAL : 48- 54: apkfg LLndpnG lcyfn SCRB_ZYMMO : 405- 411: kgqet LLyidrS qnrii I 9: 9.7607 73( 26) G-x-A-x(3)-[ADEGNST] Occurences: 73(26) CSCA_ECOLI : 69- 75: gpmhw GhAtsdD mihwq CSCA_ECOLI : 100- 106: dgcfs GsAvddN gvlsl CSCA_ECOLI : 308- 314: pskre GwAgcmT larel CSCA_ECOLI : 440- 446: vfind GeAvmsS riypq INU1_KLUMA : 86- 92: tplyw GhAvskD ltswt INU1_KLUMA : 327- 333: ekdvy GiAwasN wqyaq INU1_KLUMA : 457- 463: gyetn GgAfflD rghtk INV1_HANAN : 90- 96: twdyh GnAlepE nddeg INV1_HANAN : 306- 312: edgal GlAwasN wqyan INV1_LYCES : 148- 154: gnitw GhAvskD lihwl INV1_LYCES : 267- 273: kigkt GvAlvyE tsnft INV1_LYCES : 402- 408: adlqk GwAsvqS iprtv INV1_LYCES : 492- 498: scsts GgAasrG ilgpf INV1_YEAST : 12- 18: lflla GfAakiS asmtn INV1_YEAST : 75- 81: lplfw GhAtsdD lthwq INV1_YEAST : 300- 306: tdpty GsAlgiA wasnw INV1_YEAST : 304- 310: ygsal GiAwasN weysa INV2_YEAST : 12- 18: lflla GfAakiS asmtn INV2_YEAST : 75- 81: tplfw GhAtsdD ltnwe INV2_YEAST : 300- 306: tdpty GsAlgiA wasnw INV2_YEAST : 304- 310: ygsal GiAwasN weysa INV3_YEAST : 12- 18: iflla GfAakiS almtn INV4_YEAST : 12- 18: iflla GfAakiS almtn INV4_YEAST : 75- 81: lplfw GhAtsnD lthwq INV4_YEAST : 300- 306: tdpty GsAlgiA wasnw INV4_YEAST : 304- 310: ygsal GiAwasN weysa INV5_YEAST : 12- 18: iflla GfAakiS almtn INV7_YEAST : 12- 18: iflla GfAakiS almtn INVA_DAUCA : 345- 351: rrilw GwAnesD stahd INVA_PHAAU : 160- 166: gdivw GhAvsrD mihwl INVA_PHAAU : 278- 284: klnkt GiAlvyD tedfk INVA_PHAAU : 413- 419: advtk GwAsvqS iprtv INVA_PHAAU : 502- 508: tcsss GgAaqrG algpf INVA_PHAAU : 503- 509: csssg GaAqrgA lgpfg INVA_ZYMMO : 73- 79: gpmhw GhAksrD lvhwe INVA_ZYMMO : 104- 110: dgcfs GcAvdnN giltl INVA_ZYMMO : 321- 327: psqrd GwAgcmT lprkl INVA_ZYMMO : 393- 399: sayqa GlAlrcN dkgqe INVA_ZYMMO : 487- 493: lfaie GyAvfdS fkrwt INVB_DAUCA : 43- 49: tdvlk GwAsvqS ipr INV_SCHOC : 83- 89: qplyw GhAtsnD lvhwd INV_SCHOC : 207- 213: kiqif GsAnlkN wvlns INV_SCHOC : 307- 313: ehgvl GlAwasN wqyad RAFD_ECOLI : 68- 74: gpmhw GhAtstD mlhwq RAFD_ECOLI : 99- 105: dgcfs GsAvddD gvlsl RAFD_ECOLI : 439- 445: vfvnd GeAtlsS riypq RAFD_ECOLI : 463- 469: lyaah GdAiltD gtlwm SACC_BACSU : 79- 85: gpmhw GhAvskD lvtwe SACC_BACSU : 381- 387: lagqs GdAyeiN aefkv SACC_BACSU : 395- 401: fkvsp GsAaefG fkvrt SACC_BACSU : 608- 614: fkfen GaAsviA eyktp SCRB_BACSU : 104- 110: ngcys GsAvtkD drlyl SCRB_BACSU : 186- 192: tenlk GqAvlfA sdnlt SCRB_KLEPN : 102- 108: ngcys GsAvefE galtl SCRB_LACLA : 108- 114: agvys GsAlafE nflfl SCRB_LACLA : 299- 305: fnapd GsAyaiS wlglp SCRB_PEDPE : 91- 97: dwhde GlAirpD tpyds SCRB_PEDPE : 108- 114: hgayt GtAlpiD dqlfi SCRB_PEDPE : 296- 302: inapd GrAlavS wiglp SCRB_SALTY : 102- 108: ngcys GsAvdnN gtltl SCRB_SALTY : 237- 243: iccpq GiAreeE cylnt SCRB_SALTY : 345- 351: lsalr GeAngwS gnalp SCRB_SALTY : 352- 358: angws GnAlplA pmeid SCRB_STAXY : 316- 322: psdad GwAhclT iprvl SCRB_STAXY : 354- 360: eetal GyAnkfT rqlhp SCRB_STRMU : 108- 114: hgays GsAyeiG dqlfl SCRB_STRMU : 363- 369: dnkgn GlAitvD tkmgt SCRB_VIBAL : 112- 118: hgvys GgAlveN nqvll SCRB_ZYMMO : 73- 79: gpmhw GhAksrD lvhwe SCRB_ZYMMO : 104- 110: dgcfs GcAvdnN gvltl SCRB_ZYMMO : 320- 326: psqrd GwAgcmT lprkl SCRB_ZYMMO : 392- 398: nayqa GlAlrcN gkgqe SCRB_ZYMMO : 486- 492: lfaie GyAvfdS fkrwt J 10: 8.3401 52( 26) Q-x(2)-P Occurences: 52(26) CSCA_ECOLI : 55- 58: yhafy QhhP msehw CSCA_ECOLI : 80- 83: dmihw QheP ialap INU1_KLUMA : 71- 74: whlyy QynP aatiw INU1_KLUMA : 338- 341: nwqya QqaP tdpwr INV1_HANAN : 3- 6: mi QlsP llllp INV1_HANAN : 60- 63: whvyf QhnP dkksi INV1_HANAN : 169- 172: vnssq QrdP kvlwh INV1_LYCES : 134- 137: yhlfy QynP dsaiw INV1_LYCES : 407- 410: gwasv QsiP rtvly INV1_LYCES : 629- 632: esani QsfP lqdl INV1_YEAST : 60- 63: whlyf QynP ndtvw INV1_YEAST : 86- 89: dlthw QdeP vaiap INV1_YEAST : 157- 160: tftey QknP vlaan INV1_YEAST : 339- 342: lntey QanP eteli INV2_YEAST : 60- 63: whlyf QynP ndtvw INV2_YEAST : 157- 160: tftey QknP vlaan INV2_YEAST : 339- 342: lntey QanP eteli INV3_YEAST : 60- 63: whlyf QynP ndtvw INV4_YEAST : 60- 63: whlyf QynP ndtvw INV4_YEAST : 86- 89: dlthw QdeP vaiap INV4_YEAST : 157- 160: tftey QknP vlaan INV4_YEAST : 339- 342: lntey QanP eteli INV5_YEAST : 60- 63: whlyf QynP ndtvw INV7_YEAST : 60- 63: whlyf QynP ndtvw INVA_DAUCA : 90- 93: yhlfy QynP kgavw INVA_DAUCA : 365- 368: gwagi QliP rtlwl INVA_PHAAU : 146- 149: yhffy QynP ngavw INVA_PHAAU : 418- 421: gwasv QsiP rtvrl INVA_ZYMMO : 59- 62: yhlfy QyyP fapvw INVA_ZYMMO : 273- 276: kwqap QftP etsfq INVB_DAUCA : 48- 51: gwasv QsiP r INV_SCHOC : 68- 71: whlyf QynP nataw INV_SCHOC : 275- 278: dfdgf QfvP ddsqt RAFD_ECOLI : 54- 57: yhaff QhhP asayq SACC_BACSU : 65- 68: yhlfy QyhP yglqw SACC_BACSU : 72- 75: hpygl QwgP mhwgh SCRB_BACSU : 59- 62: yhvff QwqP fqtgh SCRB_BACSU : 338- 341: qkliq QplP elkam SCRB_KLEPN : 16- 19: lqavm QgqP qalad SCRB_KLEPN : 57- 60: yhlfy QwnP lacdh SCRB_KLEPN : 353- 356: qgwcg QtlP lapme SCRB_LACLA : 63- 66: whlfy QhfP fgpvh SCRB_PEDPE : 63- 66: whlfy QvfP fgpvh SCRB_SALTY : 16- 19: lqavm QgqP ralad SCRB_SALTY : 57- 60: yhlfy QwnP lacdh SCRB_SALTY : 82- 85: dllhw QheP ialmp SCRB_STAXY : 64- 67: yyvsh QwfP lgpvh SCRB_STAXY : 362- 365: nkftr QlhP yegkq SCRB_STRMU : 63- 66: fnlfy QnwP fgaah SCRB_VIBAL : 67- 70: hhify QwtP vgpvh SCRB_ZYMMO : 59- 62: yhlfy QyyP fapvw SCRB_ZYMMO : 273- 276: kwqap QftP etsfq K 11: 8.3401 51( 26) K-x-W Occurences: 51(26) CSCA_ECOLI : 163- 165: hfrdp KvW readt INU1_KLUMA : 219- 221: sspnl KnW tlesn INV1_HANAN : 53- 55: ydrkd KlW hvyfq INV1_HANAN : 204- 206: gspdl KkW dlksn INV1_LYCES : 113- 115: hfqpq KnW mndpn INV1_LYCES : 126- 128: gplyh KgW yhlfy INV1_LYCES : 401- 403: sadlq KgW asvqs INV1_LYCES : 619- 621: vtasv KiW slesa INV1_YEAST : 37- 39: hftpn KgW mndpn INV1_YEAST : 181- 183: wyeps KkW imtaa INV1_YEAST : 204- 206: ssddl KsW klesa INV2_YEAST : 37- 39: hftpn KgW mndpn INV2_YEAST : 204- 206: ssddl KsW klesa INV3_YEAST : 37- 39: hftpn KgW mndpn INV4_YEAST : 37- 39: hftpn KgW mndpn INV4_YEAST : 204- 206: ssddl KsW klesa INV5_YEAST : 37- 39: hftpn KgW mndpn INV7_YEAST : 37- 39: hftpn KgW mndpn INVA_DAUCA : 359- 361: ahdva KgW agiql INVA_PHAAU : 125- 127: hfqpe KnW mndpn INVA_PHAAU : 138- 140: gpmyy KgW yhffy INVA_PHAAU : 412- 414: yadvt KgW asvqs INVA_PHAAU : 629- 631: vtasl KvW qmnsa INVA_ZYMMO : 204- 206: rsenl KdW ifvkt INVA_ZYMMO : 495- 497: vfdsf KrW tlqda INVB_DAUCA : 42- 44: ptdvl KgW asvqs INV_SCHOC : 45- 47: hftpe KgW mndpn INV_SCHOC : 61- 63: ydkta KlW hlyfq INV_SCHOC : 212- 214: gsanl KnW vlnsn RAFD_ECOLI : 162- 164: hfrdp KvW hedgs SACC_BACSU : 182- 184: wyeke KkW vmvla SACC_BACSU : 203- 205: tsknl KqW tyase SACC_BACSU : 239- 241: gnpnq KkW vmqvs SACC_BACSU : 361- 363: irgts KkW knlti SACC_BACSU : 511- 513: ihplk KvW gttpf SCRB_BACSU : 70- 72: tghga KfW ghytt SCRB_KLEPN : 68- 70: cdhty KcW ghwss SCRB_KLEPN : 162- 164: hvrdp KvW rqdgr SCRB_LACLA : 74- 76: pvhgl KsW vhlvs SCRB_LACLA : 467- 469: npiki KlW elkk SCRB_PEDPE : 74- 76: pvhgl KsW qhvts SCRB_PEDPE : 481- 483: tavtg KvW ewrqs SCRB_SALTY : 68- 70: cdhtf KcW ahwss SCRB_SALTY : 162- 164: hvrdp KvW rhedl SCRB_STAXY : 75- 77: pvhgl KyW ytyqs SCRB_STRMU : 74- 76: aahgl KsW ihtes SCRB_VIBAL : 78- 80: pvhgm KyW yhlst SCRB_VIBAL : 171- 173: hfrdp KvW kkgdd SCRB_VIBAL : 203- 205: qskdl KtW qhkgp SCRB_ZYMMO : 204- 206: rsenl KdW ifvkt SCRB_ZYMMO : 494- 496: vfdsf KrW tlqda L 12: 8.3401 64( 26) P-x(5)-G Occurences: 64(26) CSCA_ECOLI : 58- 64: fyqhh PmsehwG pmhwg CSCA_ECOLI : 83- 89: hwqhe PialapG dendk CSCA_ECOLI : 217- 223: ymwec PdffslG dqhyl CSCA_ECOLI : 252- 258: qsgvi PgmwspG rlfaq CSCA_ECOLI : 404- 410: lwryy PhenldG yrsip INU1_KLUMA : 74- 80: yyqyn PaatiwG tplyw INU1_KLUMA : 105- 111: gaslg PgsddaG afsgs INU1_KLUMA : 273- 279: fvsin PggplgG svtqy INV1_HANAN : 95- 101: gnale PenddeG ifsgs INV1_HANAN : 252- 258: llain PgsplgG siney INV1_HANAN : 300- 306: fdnte PedgalG lawas INV1_LYCES : 19- 25: rytll PdqpdsG hrksl INV1_LYCES : 66- 72: idsrs PappsrG vsqgv INV1_LYCES : 137- 143: fyqyn PdsaiwG nitwg INV1_LYCES : 243- 249: kdfrd PttawtG pqngq INV1_LYCES : 593- 599: tsriy PtkavnG aarlf INV1_YEAST : 63- 69: yfqyn PndtvwG lplfw INV1_YEAST : 94- 100: pvaia PkrkdsG aysgs INV1_YEAST : 249- 255: fisin PgapagG sfnqy INV2_YEAST : 63- 69: yfqyn PndtvwG tplfw INV2_YEAST : 94- 100: piaia PkrndsG afsgs INV2_YEAST : 249- 255: fisin PgapagG sfnqy INV3_YEAST : 63- 69: yfqyn PndtvwG lplfw INV4_YEAST : 63- 69: yfqyn PndtvwG lplfw INV4_YEAST : 94- 100: pvaia PkrndsG aysgs INV4_YEAST : 249- 255: fisin PgapagG sfnqy INV5_YEAST : 63- 69: yfqyn PndtvwG lplfw INV7_YEAST : 63- 69: yfqyn PndtvwG lplfw INVA_DAUCA : 93- 99: fyqyn PkgavwG nivwa INVA_DAUCA : 145- 151: lpgnk PvilytG ivegp INVA_PHAAU : 149- 155: fyqyn PngavwG divwg INVA_PHAAU : 314- 320: cvdff PvskknG ngldt INVA_PHAAU : 603- 609: tsrvy PtkaiyG aarlf INVA_ZYMMO : 62- 68: fyqyy PfapvwG pmhwg INVA_ZYMMO : 87- 93: hwetl PvalapG dsfdr INVA_ZYMMO : 231- 237: fmwec PdffslG nrsvl INVB_DAUCA : 14- 20: asyxd PttawiG pdgkl INVB_DAUCA : 37- 43: esdne PtdvlkG wasvq INV_SCHOC : 71- 77: yfqyn PnatawG qplyw INV_SCHOC : 102- 108: eiaig PehdneG ifsgs INV_SCHOC : 255- 261: flain PgsplgG sinqy RAFD_ECOLI : 57- 63: ffqhh PasayqG pmhwg RAFD_ECOLI : 216- 222: ymwec PdffrcG nfhwl RAFD_ECOLI : 403- 409: lwryy PeegldG yrsve SACC_BACSU : 68- 74: fyqyh PyglqwG pmhwg SACC_BACSU : 160- 166: kyagn PvipnpG kkdfr SACC_BACSU : 447- 453: gketa PlkpvnG kvklr SACC_BACSU : 483- 489: tdiil PdrsskG lelya SACC_BACSU : 508- 514: sltih PlkkvwG ttpfm SCRB_BACSU : 62- 68: ffqwq PfqtghG akfwg SCRB_KLEPN : 250- 256: flnty PavwmaG rfdae SCRB_LACLA : 66- 72: fyqhf PfgpvhG lkswv SCRB_PEDPE : 66- 72: fyqvf PfgpvhG lkswq SCRB_SALTY : 220- 226: ymwec PdlfplG dqhil SCRB_SALTY : 250- 256: ylnty PavwmaG efdya SCRB_STAXY : 67- 73: shqwf PlgpvhG lkywy SCRB_STRMU : 66- 72: fyqnw PfgaahG lkswi SCRB_STRMU : 431- 437: tgrvf PndkqtG iviks SCRB_VIBAL : 70- 76: fyqwt PvgpvhG mkywy SCRB_VIBAL : 170- 176: ehfrd PkvwkkG ddylm SCRB_VIBAL : 472- 478: qarlf PlkgitG lfesa SCRB_ZYMMO : 62- 68: fyqyy PfapvwG pmhwg SCRB_ZYMMO : 87- 93: hwetl PvalapG dsfdr SCRB_ZYMMO : 231- 237: fmwec PdffslG nrsvl M 13: 8.3401 53( 26) N-x(5)-L Occurences: 53(26) CSCA_ECOLI : 182- 188: akdpg NtgqilL yrgss INU1_KLUMA : 217- 223: fyssp NlknwtL esnft INU1_KLUMA : 365- 371: fstnp NsadvvL nsqpv INU1_KLUMA : 400- 406: tvtse NgkkikL dnpsg INU1_KLUMA : 443- 449: yfkgn NddneyL rlgye INU1_KLUMA : 456- 462: lgyet NggaffL drght INV1_HANAN : 342- 348: kyvdv NpenygL tliqk INV1_HANAN : 364- 370: ketrl NetlktL etine INV1_LYCES : 53- 59: ffpil NnqspdL qidsr INV1_LYCES : 117- 123: qknwm NdpngpL yhkgw INV1_LYCES : 211- 217: laypa NlsdplL ldwvk INV1_LYCES : 276- 282: vyets NftsfkL ldgvl INV1_LYCES : 627- 633: slesa NiqsfpL qdl INV1_YEAST : 64- 70: fqynp NdtvwgL plfwg INV1_YEAST : 376- 382: tltka NsynvdL snstg INV2_YEAST : 376- 382: tltka NsynvdL snstg INV3_YEAST : 64- 70: fqynp NdtvwgL plfw INV4_YEAST : 64- 70: fqynp NdtvwgL plfwg INV4_YEAST : 376- 382: tltka NsfsvdL snstg INV5_YEAST : 64- 70: fqynp NdtvwgL plfw INV7_YEAST : 64- 70: fqynp NdtvwgL plfwv INVA_DAUCA : 9- 15: tirnr NydhgsL pflqs INVA_DAUCA : 170- 176: yaipa NlsdpyL rkwik INVA_PHAAU : 198- 204: atilp NgeiimL ytgst INVA_PHAAU : 275- 281: igskl NktgiaL vydte INVA_PHAAU : 367- 373: pddvk NdvgvgL rydyg INVA_PHAAU : 390- 396: tfydq NkdrriL wgwig INVA_ZYMMO : 109- 115: gcavd NngiltL iytgh INVA_ZYMMO : 437- 443: scplp NtskvrL hifld INVB_DAUCA : 35- 41: igesd NeptdvL kgwas INV_SCHOC : 210- 216: ifgsa NlknwvL nsnfs INV_SCHOC : 349- 355: lklta NidksvL pdsin INV_SCHOC : 392- 398: glfdf NitfkvL nlnvs RAFD_ECOLI : 357- 363: qllte NvqaaeL lvtwh RAFD_ECOLI : 437- 443: vevfv NdgeatL ssriy SACC_BACSU : 274- 280: hfkne NppnkvL wtdyg SCRB_BACSU : 473- 479: gksem NvgiwtL m SCRB_KLEPN : 385- 391: lqltv NrdglrL srrgl SCRB_LACLA : 438- 444: feifi NdgekvL sdcrv SCRB_LACLA : 462- 468: sirsq NpikikL welkk SCRB_PEDPE : 366- 372: tvaal NgsfelL ltvpa SCRB_PEDPE : 463- 469: grffl NatpsrL nvqgd SCRB_SALTY : 107- 113: gsavd NngtltL cytgn SCRB_STAXY : 231- 237: dyfnl NgydmlL fcpqg SCRB_STAXY : 357- 363: algya NkftrqL hpyeg SCRB_STAXY : 402- 408: tlity NkreqkL tldrs SCRB_STRMU : 129- 135: nvrde NwvrhpL qigaf SCRB_STRMU : 337- 343: kpetn NtyeleL tfdss SCRB_VIBAL : 231- 237: dffei NgqsvmL fspqg SCRB_VIBAL : 266- 272: vgdql NlesmtL enhqd SCRB_ZYMMO : 109- 115: gcavd NngvltL iytgh SCRB_ZYMMO : 387- 393: dleks NayqagL alrcn SCRB_ZYMMO : 436- 442: scplp NtskvrL hifld N 14: 8.3401 86( 26) L-x(5)-E Occurences: 86(26) CSCA_ECOLI : 315- 321: agcmt LarelsE sngkl CSCA_ECOLI : 327- 333: sngkl LqrpvhE aeslr CSCA_ECOLI : 370- 376: qlqwa LknsdaE hyglq INU1_KLUMA : 57- 63: ndpng LwydakE edwhl INU1_KLUMA : 218- 224: ysspn LknwtlE snfth INV1_HANAN : 227- 233: yecpg LfklpiE nplnd INV1_HANAN : 256- 262: npgsp LggsinE yfigd INV1_LYCES : 385- 391: kerrv LwgwigE tdses INV1_LYCES : 423- 429: ktgth LlqwpvE eiesl INV1_LYCES : 424- 430: tgthl LqwpveE ieslr INV1_LYCES : 446- 452: vkqvd LqpgsiE llrvd INV1_YEAST : 46- 52: ndpng LwydakE gkwhl INV1_YEAST : 82- 88: atsdd LthwqdE pvaia INV1_YEAST : 203- 209: yssdd LkswklE safan INV1_YEAST : 227- 233: yecpg LievpsE qdpsk INV1_YEAST : 346- 352: npete LinlkaE pilni INV1_YEAST : 413- 419: fadls LwfkglE dpeey INV1_YEAST : 480- 486: kvygl LdqnilE lyfnd INV2_YEAST : 203- 209: yssdd LkswklE safan INV2_YEAST : 227- 233: yecpg LievptE qdpsk INV2_YEAST : 346- 352: npete LinlkaE pilni INV2_YEAST : 413- 419: fadls LwfkglE dpeey INV2_YEAST : 480- 486: kvygl LdqnilE lyfnd INV3_YEAST : 46- 52: ndpng LwydakE gkwhl INV4_YEAST : 46- 52: ndpng LwydakE gkwhl INV4_YEAST : 82- 88: atsnd LthwqdE pvaia INV4_YEAST : 203- 209: yssdd LkswklE safan INV4_YEAST : 227- 233: yecpg LievptE qdpsk INV4_YEAST : 346- 352: npete LinlkaE pilni INV4_YEAST : 413- 419: fsdls LwfkglE dpeey INV4_YEAST : 480- 486: kvygl LdqnilE lyfnd INV5_YEAST : 46- 52: ndpng LwydakE gkwhl INV7_YEAST : 46- 52: ndpng LwydakE gkwhl INVA_DAUCA : 32- 38: vtttt LhingvE afhei INVA_DAUCA : 47- 53: eihyn LqsvgaE nvkqv INVA_DAUCA : 148- 154: nkpvi LytgivE gppkn INVA_DAUCA : 287- 293: vlkvs LdltryE yytvg INVA_DAUCA : 343- 349: knrri LwgwanE sdsta INVA_DAUCA : 380- 386: psgkq LmqwpiE eletl INVA_DAUCA : 466- 472: vgpfg LltlasE kleey INVA_DAUCA : 469- 475: fgllt LaseklE eytpv INVA_PHAAU : 396- 402: kdrri LwgwigE sdsey INVA_PHAAU : 435- 441: tgsnl LqwpvdE veslr INVA_PHAAU : 445- 451: deves LrlrsdE fkslk INVA_PHAAU : 515- 521: lgpfg LlvladE glsey INVA_PHAAU : 615- 621: aarlf LfnnatE atvta INVA_ZYMMO : 47- 53: ndpng LiffkgE yhlfy INVA_ZYMMO : 447- 453: rlhif LdrssiE ifvgd INVB_DAUCA : 26- 32: pdgkl LwgwigE sdnep INV_SCHOC : 27- 33: sssid LsvdtsE ynrpl INV_SCHOC : 38- 44: eynrp LihftpE kgwmn INV_SCHOC : 234- 240: ygmsr LievpiE nsdks RAFD_ECOLI : 7- 13: kqrls LaqsalE klsar RAFD_ECOLI : 193- 199: yrgts LrdwhlE hvlah RAFD_ECOLI : 262- 268: gsvfa LkgvfeE ldygh RAFD_ECOLI : 314- 320: agclt LprevfE rdgrl RAFD_ECOLI : 398- 404: agrli LwryypE egldg RAFD_ECOLI : 427- 433: tlrif LdrssvE vfvnd SACC_BACSU : 423- 429: rrnak LfvdrsE sgndt SCRB_BACSU : 8- 14: ahdqe LrrrayE evekk SCRB_BACSU : 261- 267: yfvgr LdynkpE lkhge SCRB_BACSU : 364- 370: gssga LpvekpE rteil SCRB_BACSU : 376- 382: rteil LedihtE sgfsi SCRB_BACSU : 433- 439: tvhmf LdassvE ifinn SCRB_KLEPN : 78- 84: wssad LlhwrhE pialm SCRB_KLEPN : 340- 346: rplre LvalrgE aqgwc SCRB_KLEPN : 355- 361: wcgqt LplapmE lafdl SCRB_KLEPN : 460- 466: fcrwl LrpcmvE SCRB_LACLA : 338- 344: ikdnk LyqypvE kmkel SCRB_LACLA : 383- 389: qtstl LslmtnE kgdsa SCRB_LACLA : 416- 422: nyekr LahvkiE kmnvf SCRB_PEDPE : 84- 90: vtskn LvdwhdE glair SCRB_SALTY : 78- 84: wssid LlhwqhE pialm SCRB_SALTY : 340- 346: rplre LsalrgE angws SCRB_SALTY : 355- 361: wsgna LplapmE idlqt SCRB_SALTY : 460- 466: fcywp LrtcmvE SCRB_STAXY : 373- 379: gkqfe LiidilE neate SCRB_STAXY : 378- 384: liidi LeneatE vyfev SCRB_STAXY : 408- 414: kreqk LtldrsE sgqlp SCRB_STRMU : 311- 317: lkhgk LyqypvE avrsl SCRB_VIBAL : 55- 61: ndpng LcyfngE hhify SCRB_VIBAL : 267- 273: gdqln LesmtlE nhqdi SCRB_VIBAL : 345- 351: tplpe LkslrkE evvfa SCRB_VIBAL : 372- 378: liqld LvgdgfE lelsn SCRB_ZYMMO : 47- 53: ndpng LiffkgE yhlfy SCRB_ZYMMO : 446- 452: rlhif LdrssiE ifvgd O 15: 8.3401 90( 26) L-x(2)-G Occurences: 90(26) CSCA_ECOLI : 86- 89: hepia LapG dendk CSCA_ECOLI : 188- 191: tgqil LyrG sslre CSCA_ECOLI : 270- 273: ghfte LdnG hdfya CSCA_ECOLI : 380- 383: aehyg LqlG agmrl CSCA_ECOLI : 382- 385: hyglq LgaG mrlyi CSCA_ECOLI : 416- 419: yrsip LpqG dmlal CSCA_ECOLI : 468- 471: hgvav LqhG alwql INU1_KLUMA : 83- 86: iwgtp LywG havsk INU1_KLUMA : 103- 106: dygas LgpG sddag INU1_KLUMA : 144- 147: vavwt LskG psqaq INU1_KLUMA : 158- 161: hisys LdgG ytfeh INU1_KLUMA : 304- 307: gqtrf LdmG kdyya INU1_KLUMA : 449- 452: ddney LrlG yetng INU1_KLUMA : 462- 465: ggaff LdrG htkip INV1_HANAN : 147- 150: eiays LdkG ysfik INV1_HANAN : 414- 417: ftqtd LkmG ysnmt INV1_LYCES : 184- 187: gsati LpdG qimml INV1_LYCES : 192- 195: gqimm LytG dtddy INV1_LYCES : 257- 260: ngqwl LtiG skigk INV1_LYCES : 282- 285: ftsfk LldG vlhav INV1_LYCES : 356- 359: pdnpe LdcG iglrl INV1_LYCES : 364- 367: giglr LdyG kyyas INV1_LYCES : 399- 402: sesad LqkG wasvq INV1_LYCES : 434- 437: eeies LrvG dptvk INV1_LYCES : 446- 449: vkqvd LqpG siell INV1_YEAST : 9- 12: qaflf LlaG faaki INV1_YEAST : 72- 75: vwglp LfwG hatsd INV1_YEAST : 147- 150: yisys LdgG ytfte INV1_YEAST : 425- 428: dpeey LrmG fevsa INV1_YEAST : 438- 441: assff LdrG nskvk INV2_YEAST : 9- 12: qaflf LlaG faaki INV2_YEAST : 72- 75: vwgtp LfwG hatsd INV2_YEAST : 147- 150: yisys LdgG ytfte INV2_YEAST : 425- 428: dpeey LrmG fevsa INV2_YEAST : 438- 441: assff LdrG nskvk INV3_YEAST : 9- 12: qafif LlaG faaki INV4_YEAST : 9- 12: qafif LlaG faaki INV4_YEAST : 72- 75: vwglp LfwG hatsn INV4_YEAST : 147- 150: yisys LdgG ytfte INV4_YEAST : 425- 428: dpeey LrmG feasa INV4_YEAST : 438- 441: assff LdrG nskvk INV5_YEAST : 9- 12: qafif LlaG faaki INV7_YEAST : 9- 12: qafif LlaG faaki INVA_DAUCA : 148- 151: nkpvi LytG ivegp INVA_DAUCA : 404- 407: srkqd LskG ilvev INVA_DAUCA : 504- 507: atrss LkeG lyrps INVA_PHAAU : 94- 97: kssnl LfaG eggas INVA_PHAAU : 196- 199: gsati LpnG eiiml INVA_PHAAU : 204- 207: geiim LytG stnes INVA_PHAAU : 293- 296: fktye LkeG llrav INVA_ZYMMO : 90- 93: tlpva LapG dsfdr INVA_ZYMMO : 219- 222: gdnsq LplG krafm INVA_ZYMMO : 283- 286: tsfqe LdyG hdfya INVB_DAUCA : 25- 28: gpdgk LlwG wiges INV_SCHOC : 15- 18: ipllt LffG yvass INV_SCHOC : 80- 83: awgqp LywG hatsn INV_SCHOC : 155- 158: diafs LdgG ytftk RAFD_ECOLI : 85- 88: helva LapG dkydr RAFD_ECOLI : 187- 190: ngqvl LyrG tslrd RAFD_ECOLI : 269- 272: gvfee LdyG hdfya RAFD_ECOLI : 381- 384: hygir LgeG lrfyv RAFD_ECOLI : 467- 470: hgdai LtdG tlwml SACC_BACSU : 71- 74: yhpyg LqwG pmhwg SACC_BACSU : 188- 191: kwvmv LaaG drili SACC_BACSU : 305- 308: tdsrr LwlG wmsnw SCRB_BACSU : 268- 271: ynkpe LkhG eftel SCRB_BACSU : 276- 279: gefte LdqG fdfya SCRB_KLEPN : 150- 153: gpvlp LpeG ytghv SCRB_KLEPN : 273- 276: gplhe LdsG fefya SCRB_KLEPN : 293- 296: ddgrr LlvG wmgvp SCRB_LACLA : 282- 285: gqlin LdeG fdcya SCRB_PEDPE : 238- 241: arliv LsqG lsqat SCRB_PEDPE : 279- 282: haltq LddG fdvya SCRB_PEDPE : 330- 333: vkelt LkdG hlyqn SCRB_SALTY : 150- 153: gpvlp LpeG ytghv SCRB_SALTY : 273- 276: gelhe LdaG fefya SCRB_SALTY : 293- 296: sdgrr LlvG wmgvp SCRB_SALTY : 311- 314: mlqpt LnnG wihqm SCRB_SALTY : 374- 377: gdmls LdfG gvltl SCRB_STAXY : 278- 281: adfhe LdyG fdfya SCRB_STRMU : 135- 138: wvrhp LqiG afmdk SCRB_STRMU : 186- 189: vgaqs LdfG gskse SCRB_STRMU : 255- 258: seiqn LdfG fecya SCRB_STRMU : 306- 309: vkels LkhG klyqy SCRB_STRMU : 388- 391: geqya LefG sqrsc SCRB_VIBAL : 332- 335: prelt LkdG flvqt SCRB_ZYMMO : 90- 93: tlpva LapG dsfdr SCRB_ZYMMO : 219- 222: gdnsq LplG krafm SCRB_ZYMMO : 283- 286: tsfqe LdyG hdfya SCRB_ZYMMO : 297- 300: aqrlk LkdG rqnin P 16: 8.3401 85( 26) G-x(2)-L Occurences: 85(26) CSCA_ECOLI : 147- 150: hfekq GviL tppeg CSCA_ECOLI : 184- 187: dpgnt GqiL lyrgs CSCA_ECOLI : 191- 194: illyr GssL rewtf CSCA_ECOLI : 324- 327: lsesn GklL qrpvh CSCA_ECOLI : 379- 382: daehy GlqL gagmr CSCA_ECOLI : 385- 388: lqlga GmrL yidnq CSCA_ECOLI : 419- 422: iplpq GdmL alrif INU1_KLUMA : 80- 83: aatiw GtpL ywgha INU1_KLUMA : 100- 103: swtdy GasL gpgsd INU1_KLUMA : 274- 277: vsinp GgpL ggsvt INV1_HANAN : 90- 93: twdyh GnaL epend INV1_HANAN : 253- 256: lainp GspL ggsin INV1_HANAN : 347- 350: npeny GltL iqkpv INV1_LYCES : 35- 38: lkiis GifL svfll INV1_LYCES : 253- 256: tgpqn GqwL ltigs INV1_LYCES : 267- 270: kigkt GvaL vyets INV1_LYCES : 359- 362: peldc GigL rldyg INV1_LYCES : 361- 364: ldcgi GlrL dygky INV1_LYCES : 420- 423: ydkkt GthL lqwpv INV1_YEAST : 69- 72: ndtvw GlpL fwgha INV1_YEAST : 300- 303: tdpty GsaL giawa INV1_YEAST : 505- 508: yfmtt GnaL gsvnm INV2_YEAST : 69- 72: ndtvw GtpL fwgha INV2_YEAST : 300- 303: tdpty GsaL giawa INV2_YEAST : 505- 508: yfmtt GnaL gsvnm INV3_YEAST : 69- 72: ndtvw GlpL fw INV4_YEAST : 69- 72: ndtvw GlpL fwgha INV4_YEAST : 300- 303: tdpty GsaL giawa INV4_YEAST : 361- 364: nisna GpwL hfasn INV4_YEAST : 505- 508: yfmtt GnaL gsvnm INV5_YEAST : 69- 72: ndtvw GlpL fw INV7_YEAST : 69- 72: ndtvw GlpL fwvnm INVA_DAUCA : 298- 301: eyytv GtyL tdkdr INVA_DAUCA : 363- 366: akgwa GiqL iprtl INVA_DAUCA : 377- 380: wldps GkqL mqwpi INVA_PHAAU : 271- 274: writi GskL nktgi INVA_PHAAU : 278- 281: klnkt GiaL vydte INVA_PHAAU : 320- 323: vskkn GngL dtsvn INVA_PHAAU : 370- 373: vkndv GvgL rydyg INVA_PHAAU : 431- 434: ldtkt GsnL lqwpv INVA_ZYMMO : 20- 23: aqkka GkrL vssew INVA_ZYMMO : 150- 153: hfqke GiiL ekppm INVA_ZYMMO : 263- 266: nlfqn GyiL gkwqa INVA_ZYMMO : 393- 396: sayqa GlaL rcndk INVB_DAUCA : 23- 26: wigpd GklL wgwig INV_SCHOC : 77- 80: nataw GqpL ywgha INV_SCHOC : 256- 259: lainp GspL ggsin RAFD_ECOLI : 146- 149: rfekq GcvL tppeg RAFD_ECOLI : 183- 186: dasdn GqvL lyrgt RAFD_ECOLI : 190- 193: vllyr GtsL rdwhl RAFD_ECOLI : 350- 353: pvrlh GvqL ltenv RAFD_ECOLI : 378- 381: haehy GirL geglr RAFD_ECOLI : 382- 385: ygirl GegL rfyvd SACC_BACSU : 489- 492: drssk GleL yaang SCRB_BACSU : 332- 335: qltls GqkL iqqpl SCRB_KLEPN : 145- 148: tfrkl GpvL plpeg SCRB_KLEPN : 183- 186: dvqqr GkvL lftas SCRB_KLEPN : 290- 293: mqadd GrrL lvgwm SCRB_KLEPN : 352- 355: aqgwc GqtL plapm SCRB_KLEPN : 388- 391: tvnrd GlrL srrgl SCRB_LACLA : 91- 94: hfekt GlvL ypdtk SCRB_LACLA : 108- 111: agvys GsaL afenf SCRB_PEDPE : 108- 111: hgayt GtaL piddq SCRB_PEDPE : 191- 194: tttei GaiL vyfsk SCRB_PEDPE : 296- 299: inapd GraL avswi SCRB_SALTY : 145- 148: tfrki GpvL plpeg SCRB_SALTY : 183- 186: drqkr GkvL lfssa SCRB_SALTY : 290- 293: mltsd GrrL lvgwm SCRB_SALTY : 352- 355: angws GnaL plapm SCRB_SALTY : 369- 372: lqtrg GdmL sldfg SCRB_SALTY : 377- 380: lsldf GgvL tlecd SCRB_SALTY : 388- 391: ecdas GlrL arrsl SCRB_STAXY : 192- 195: nikkq GriL qyrst SCRB_STRMU : 91- 94: hfket GtvL ypdts SCRB_STRMU : 114- 117: sayei GdqL flfyt SCRB_STRMU : 361- 364: fadnk GngL aitvd SCRB_STRMU : 373- 376: vdtkm GtiL idrsk SCRB_VIBAL : 95- 98: hftdh GvgL hpdqd SCRB_VIBAL : 112- 115: hgvys GgaL vennq SCRB_VIBAL : 262- 265: vayiv GdqL nlesm SCRB_VIBAL : 376- 379: dlvgd GfeL elsnl SCRB_ZYMMO : 20- 23: aqkka GkrL lssew SCRB_ZYMMO : 150- 153: hfqke GivL ekapm SCRB_ZYMMO : 263- 266: nlfqn GyiL gkwqa SCRB_ZYMMO : 392- 395: nayqa GlaL rcngk Q 17: 8.3401 78( 26) D-x(3)-L Occurences: 78(26) CSCA_ECOLI : 39- 43: agwmn DpngL iwfnd CSCA_ECOLI : 105- 109: gsavd DngvL sliyt CSCA_ECOLI : 218- 222: mwecp DffsL gdqhy CSCA_ECOLI : 224- 228: ffslg DqhyL mfspq CSCA_ECOLI : 420- 424: plpqg DmlaL rifid INU1_KLUMA : 53- 57: hgwmn DpngL wydak INU1_KLUMA : 169- 173: fehyt DnavL dinss INU1_KLUMA : 309- 313: ldmgk DyyaL qtffn INU1_KLUMA : 445- 449: kgnnd DneyL rlgye INV1_HANAN : 171- 175: ssqqr DpkvL whdes INV1_HANAN : 496- 500: lygvv DrniL elyfn INV1_LYCES : 214- 218: panls DpllL dwvkf INV1_LYCES : 352- 356: nkwtp DnpeL dcgig INV1_LYCES : 471- 475: asfev DkvaL qgiie INV1_YEAST : 42- 46: kgwmn DpngL wydak INV1_YEAST : 285- 289: vdfgk DyyaL qtffn INV1_YEAST : 481- 485: vygll DqniL elyfn INV2_YEAST : 42- 46: kgwmn DpngL wydek INV2_YEAST : 285- 289: vdfgk DyyaL qtffn INV2_YEAST : 481- 485: vygll DqniL elyfn INV3_YEAST : 42- 46: kgwmn DpngL wydak INV4_YEAST : 42- 46: kgwmn DpngL wydak INV4_YEAST : 285- 289: vdfgk DyyaL qtffn INV4_YEAST : 481- 485: vygll DqniL elyfn INV5_YEAST : 42- 46: kgwmn DpngL wydak INV7_YEAST : 42- 46: kgwmn DpngL wydak INVA_DAUCA : 11- 15: rnrny DhgsL pflqs INVA_DAUCA : 183- 187: kwikp DnnpL vvann INVA_DAUCA : 438- 442: krepf DpkwL eydae INVA_PHAAU : 108- 112: eafpw DnsmL swqrt INVA_PHAAU : 226- 230: padps DpllL dwikh INVA_PHAAU : 355- 359: igtyd DnkvL ftpdd INVA_PHAAU : 392- 396: ydqnk DrriL wgwig INVA_PHAAU : 482- 486: aefei DtesL ektae INVA_ZYMMO : 43- 47: tgwmn DpngL iffkg INVA_ZYMMO : 215- 219: ktllg DnsqL plgkr INVA_ZYMMO : 232- 236: mwecp DffsL gnrsv INVA_ZYMMO : 474- 478: srifp DkdsL kgrlf INVB_DAUCA : 22- 26: awigp DgklL wgwig INV_SCHOC : 50- 54: kgwmn DpngL fydkt INV_SCHOC : 351- 355: ltani DksvL pdsin RAFD_ECOLI : 38- 42: agwmn DpngL iyfng RAFD_ECOLI : 104- 108: gsavd DdgvL sliyt RAFD_ECOLI : 417- 421: svelp DteyL tlrif RAFD_ECOLI : 452- 456: iypqa DsrqL slyaa SACC_BACSU : 226- 230: vwecp DlfeL pvdgn SACC_BACSU : 301- 305: dipst DsrrL wlgwm SACC_BACSU : 546- 550: grsdg DsfiL ssasg SCRB_BACSU : 111- 115: avtkd DrlyL fytgn SCRB_BACSU : 224- 228: mwecp DlfsL qgsdv SCRB_KLEPN : 206- 210: eiagh DvngL anagy SCRB_KLEPN : 221- 225: mwecp DlfpL adthl SCRB_KLEPN : 227- 231: lfpla DthlL iccpq SCRB_KLEPN : 266- 270: ergif DhgpL helds SCRB_KLEPN : 289- 293: tmqad DgrrL lvgwm SCRB_KLEPN : 387- 391: ltvnr DglrL srrgl SCRB_LACLA : 19- 23: syses DlesL rklal SCRB_LACLA : 205- 209: ennlt DwkdL gnldf SCRB_LACLA : 208- 212: ltdwk DlgnL dfske SCRB_PEDPE : 261- 265: mylva DqlnL aqaqf SCRB_PEDPE : 295- 299: ainap DgraL avswi SCRB_SALTY : 221- 225: mwecp DlfpL gdqhi SCRB_SALTY : 227- 231: lfplg DqhiL iccpq SCRB_SALTY : 289- 293: tmlts DgrrL lvgwm SCRB_SALTY : 370- 374: qtrgg DmlsL dfggv SCRB_SALTY : 385- 389: ltlec DasgL rlarr SCRB_STAXY : 48- 52: iglln DpngL iyfkg SCRB_STAXY : 226- 230: mwecp DyfnL ngydm SCRB_STAXY : 264- 268: imgqy DinnL tmnha SCRB_STAXY : 274- 278: tmnha DfheL dygfd SCRB_STRMU : 115- 119: ayeig DqlfL fytgn SCRB_VIBAL : 51- 55: fglln DpngL cyfng SCRB_VIBAL : 263- 267: ayivg DqlnL esmtl SCRB_VIBAL : 375- 379: ldlvg DgfeL elsnl SCRB_ZYMMO : 43- 47: tswmn DpngL iffkg SCRB_ZYMMO : 215- 219: ktllg DnsqL plgkr SCRB_ZYMMO : 232- 236: mwecp DffsL gnrsv SCRB_ZYMMO : 473- 477: srifp DkdsL kgrlf R 18: 7.8401 69( 26) S-x(1,2)-P Occurences: 69(26) CSCA_ECOLI : 300- 303: mdmwe SpmP skreg CSCA_ECOLI : 343- 346: rqqhq SisP rtisn CSCA_ECOLI : 413- 415: ldgyr Si-P lpqgd INU1_KLUMA : 102- 105: tdyga SlgP gsdda INU1_KLUMA : 131- 134: gffns SvdP rqrav INU1_KLUMA : 145- 148: avwtl SkgP sqaqh INU1_KLUMA : 214- 216: svlfy Ss-P nlknw INU1_KLUMA : 259- 261: snssd Sk-P dsawv INU1_KLUMA : 270- 273: wvlfv SinP ggplg INU1_KLUMA : 361- 364: tlkdf StnP nsadv INU1_KLUMA : 373- 375: dvvln Sq-P vlnyd INV1_HANAN : 121- 124: gffnd StdP eqriv INV1_LYCES : 63- 66: dlqid SrsP appsr INV1_LYCES : 65- 68: qidsr SpaP psrgv INV1_LYCES : 213- 215: ypanl Sd-P llldw INV1_LYCES : 408- 410: wasvq Si-P rtvly INV1_LYCES : 543- 546: dqtrs SeaP gvgkq INV1_LYCES : 555- 558: kqvyg SsvP vldge INV1_LYCES : 556- 558: qvygs Sv-P vldge INV1_LYCES : 630- 632: saniq Sf-P lqdl INV1_YEAST : 26- 29: mtnet SdrP lvhft INV1_YEAST : 246- 249: wvmfi SinP gapag INV1_YEAST : 319- 321: safvp Sn-P wrssm INV1_YEAST : 359- 362: ilnis SagP wsrfa INV2_YEAST : 26- 29: mtnet SdrP lvhft INV2_YEAST : 246- 249: wvmfi SinP gapag INV3_YEAST : 26- 29: mtnet SdrP lvhft INV4_YEAST : 26- 29: mtnet SdrP lvhft INV4_YEAST : 246- 249: wvmfi SinP gapag INV5_YEAST : 26- 29: mtnet SdrP lvhft INV7_YEAST : 26- 29: mtnet SdrP lvhft INVA_DAUCA : 14- 16: nydhg Sl-P flqsl INVA_DAUCA : 124- 126: paifp Sk-P fdkyg INVA_DAUCA : 172- 174: ipanl Sd-P ylrkw INVA_PHAAU : 46- 49: ggyra SgvP hahls INVA_PHAAU : 54- 56: phahl Ss-P tsnhq INVA_PHAAU : 69- 71: hqspt Sl-P sskwy INVA_PHAAU : 225- 227: ypadp Sd-P llldw INVA_PHAAU : 419- 421: wasvq Si-P rtvrl INVA_PHAAU : 565- 568: kqifg SvvP vlkge INVA_ZYMMO : 217- 220: llgdn SqlP lgkra INVA_ZYMMO : 432- 434: vkgir Sc-P lpnts INVB_DAUCA : 4- 6: aep Sy-P adasy INVB_DAUCA : 49- 51: wasvq Si-P r INV_SCHOC : 128- 131: gffns SidP nqriv INV_SCHOC : 353- 356: anidk SvlP dsinv RAFD_ECOLI : 299- 302: mnmwd SpvP trsea SACC_BACSU : 295- 298: aavsw SdiP stdsr SACC_BACSU : 329- 331: wrsat Si-P relkl SCRB_BACSU : 25- 27: epian Sd-P hrqhf SCRB_BACSU : 310- 312: dqdeg Sh-P tidch SCRB_KLEPN : 2- 4: m Sl-P srlpa SCRB_KLEPN : 5- 8: mslp SrlP ailqa SCRB_KLEPN : 25- 28: qalad ShyP qwhla SCRB_LACLA : 313- 315: glpet Sy-P tdkyn SCRB_LACLA : 460- 463: qysir SqnP ikikl SCRB_PEDPE : 151- 153: hikkl Sr-P liaha SCRB_PEDPE : 310- 312: glpei Sy-P tdren SCRB_SALTY : 2- 4: m Sl-P srlpa SCRB_SALTY : 5- 8: mslp SrlP ailqa SCRB_SALTY : 25- 28: ralad ShyP rwhha SCRB_STAXY : 157- 159: pkavi Sa-P psgyt SCRB_STAXY : 157- 160: pkavi SapP sgytq SCRB_STRMU : 442- 445: givik SgkP sgnyy SCRB_VIBAL : 245- 248: pqgvs SsnP ydfkn SCRB_VIBAL : 246- 248: qgvss Sn-P ydfkn SCRB_VIBAL : 325- 327: wagml Sl-P reltl SCRB_ZYMMO : 217- 220: llgdn SqlP lgkra SCRB_ZYMMO : 313- 315: vdmwk Sk-P sqrdg SCRB_ZYMMO : 431- 433: vkgir Sc-P lpnts S 19: 7.8401 81( 26) V-x(3,4)-P Occurences: 81(26) CSCA_ECOLI : 148- 152: fekqg Vilt-P pegim CSCA_ECOLI : 148- 153: fekqg ViltpP egimh CSCA_ECOLI : 175- 180: twwmv VgakdP gntgq INU1_KLUMA : 42- 46: lnrps Vhft-P shgwm INU1_KLUMA : 269- 273: awvlf Vsin-P ggplg INU1_KLUMA : 370- 375: nsadv VlnsqP vlnyd INU1_KLUMA : 420- 425: fhley VfngsP diksn INV1_HANAN : 339- 343: ytlky Vdvn-P enygl INV1_LYCES : 46- 50: fllls Vaff-P ilnnq INV1_LYCES : 228- 232: fkgnp Vlvp-P pgigv INV1_LYCES : 228- 233: fkgnp VlvppP gigvk INV1_LYCES : 286- 291: klldg VlhavP gtgmw INV1_LYCES : 299- 303: gmwec Vdfy-P vstkk INV1_LYCES : 406- 410: kgwas Vqsi-P rtvly INV1_LYCES : 444- 448: ptvkq Vdlq-P gsiel INV1_YEAST : 31- 35: sdrpl Vhft-P nkgwm INV1_YEAST : 67- 71: npndt Vwgl-P lfwgh INV1_YEAST : 90- 94: wqdep Vaia-P krkds INV1_YEAST : 174- 179: frdpk VfwyeP skkwi INV1_YEAST : 317- 321: eysaf Vpsn-P wrssm INV1_YEAST : 448- 452: skvkf Vken-P yftnr INV1_YEAST : 460- 464: tnrms Vnnq-P fksen INV2_YEAST : 31- 35: sdrpl Vhft-P nkgwm INV2_YEAST : 67- 71: npndt Vwgt-P lfwgh INV2_YEAST : 174- 179: frdpk VfwyeP sqkwi INV2_YEAST : 317- 321: eysaf Vptn-P wrssm INV2_YEAST : 448- 452: skvkf Vken-P yftnr INV2_YEAST : 460- 464: tnrms Vnnq-P fksen INV3_YEAST : 31- 35: sdrpl Vhft-P nkgwm INV3_YEAST : 67- 71: npndt Vwgl-P lfw INV4_YEAST : 31- 35: sdrpl Vhft-P nkgwm INV4_YEAST : 67- 71: npndt Vwgl-P lfwgh INV4_YEAST : 90- 94: wqdep Vaia-P krnds INV4_YEAST : 174- 179: frdpk VfwyeP sqkwi INV4_YEAST : 317- 321: eysaf Vptn-P wrssm INV4_YEAST : 448- 452: skvkf Vken-P yftnr INV4_YEAST : 460- 464: tnrms Vnnq-P fksen INV5_YEAST : 31- 35: sdrpl Vhft-P nkgwm INV5_YEAST : 67- 71: npndt Vwgl-P lfw INV7_YEAST : 31- 35: sdrpl Vhft-P nkgwm INV7_YEAST : 67- 71: npndt Vwgl-P lfwvn INVA_DAUCA : 153- 157: lytgi Vegp-P knvqv INVA_PHAAU : 240- 244: htgnp Vlvp-P pgiga INVA_PHAAU : 240- 245: htgnp VlvppP gigak INVA_PHAAU : 310- 314: gmwec Vdff-P vskkn INVA_PHAAU : 358- 362: yddnk Vlft-P ddvkn INVA_PHAAU : 417- 421: kgwas Vqsi-P rtvrl INVA_ZYMMO : 88- 92: wetlp Vala-P gdsfd INVA_ZYMMO : 241- 246: lgnrs VlmfsP qglka INVB_DAUCA : 47- 51: kgwas Vqsi-P r INV_SCHOC : 7- 11: vqvls Vlvi-P lltlf INV_SCHOC : 320- 324: qyadq Vptn-P wrsst RAFD_ECOLI : 83- 87: wqhel Vala-P gdkyd RAFD_ECOLI : 148- 152: ekqgc Vltp-P egimh SACC_BACSU : 94- 98: wehlp Valy-P dekgt SACC_BACSU : 161- 165: yagnp Vipn-P gkkdf SACC_BACSU : 221- 225: gshgg Vwec-P dlfel SACC_BACSU : 232- 236: lfelp Vdgn-P nqkkw SACC_BACSU : 319- 323: qyand Vpts-P wrsat SACC_BACSU : 345- 349: tegvr Vvqt-P vkele SACC_BACSU : 512- 517: hplkk VwgttP fmsnm SCRB_BACSU : 16- 21: rayee VekkeP iansd SCRB_BACSU : 148- 153: fekkg VvarlP eailt SCRB_BACSU : 149- 153: ekkgv Varl-P eailt SCRB_BACSU : 233- 238: lqgsd VlivsP qglea SCRB_KLEPN : 14- 19: ailqa VmqgqP qalad SCRB_KLEPN : 147- 151: rklgp Vlpl-P egytg SCRB_LACLA : 148- 153: knnql VkfteP liypd SCRB_LACLA : 236- 241: ingrs VlvfcP qgldk SCRB_PEDPE : 64- 69: hlfyq VfpfgP vhglk SCRB_SALTY : 14- 19: ailqa VmqgqP ralad SCRB_SALTY : 147- 151: rkigp Vlpl-P egytg SCRB_STAXY : 155- 159: kfpka Visa-P psgyt SCRB_STAXY : 155- 160: kfpka VisapP sgytq SCRB_STRMU : 27- 31: siktn Vals-P whtty SCRB_STRMU : 153- 158: qkftd VlikqP ndvte SCRB_STRMU : 210- 215: ineqp VliysP qglsk SCRB_STRMU : 329- 333: sekea Vtyk-P etnnt SCRB_VIBAL : 96- 100: ftdhg Vglh-P dqdyd SCRB_VIBAL : 235- 240: ingqs VmlfsP qgvss SCRB_VIBAL : 243- 248: fspqg VsssnP ydfkn SCRB_VIBAL : 338- 343: kdgfl VqtplP elksl SCRB_ZYMMO : 88- 92: wetlp Vala-P gdsfd SCRB_ZYMMO : 152- 157: qkegi VlekaP mpqva SCRB_ZYMMO : 241- 246: lgnrs VlmfsP qglka T 20: 7.8401 107( 26) A-x(3,4)-S Occurences: 107(26) CSCA_ECOLI : 206- 211: rvlah AdageS ymwec CSCA_ECOLI : 237- 241: pqgmn Aegy-S yrnrf CSCA_ECOLI : 316- 320: gcmtl Arel-S esngk CSCA_ECOLI : 369- 373: iqlqw Alkn-S daehy CSCA_ECOLI : 442- 446: indge Avms-S riypq INU1_KLUMA : 12- 17: lllpl AgvsaS vinyk INU1_KLUMA : 110- 114: pgsdd Agaf-S gsmvi INU1_KLUMA : 112- 116: sddag Afsg-S mvidy INU1_KLUMA : 140- 145: rqrav AvwtlS kgpsq INU1_KLUMA : 151- 155: kgpsq Aqhi-S ysldg INU1_KLUMA : 201- 205: grwim Avae-S qvfsv INU1_KLUMA : 542- 547: spydk AytinS fnvtq INV1_HANAN : 249- 254: wvlll AinpgS plggs INV1_LYCES : 88- 92: rdvag Ashv-S yawsn INV1_LYCES : 404- 408: lqkgw Asvq-S iprtv INV1_LYCES : 509- 514: gvivi AdqtlS eltpv INV1_LYCES : 537- 542: ethfc AdqtrS seapg INV1_LYCES : 609- 613: fvfnn Atga-S vtasv INV1_LYCES : 612- 617: nnatg AsvtaS vkiws INV1_LYCES : 626- 630: wsles Aniq-S fplqd INV1_YEAST : 14- 18: llagf Aaki-S asmtn INV1_YEAST : 15- 20: lagfa AkisaS mtnet INV1_YEAST : 101- 105: rkdsg Aysg-S mvidy INV1_YEAST : 251- 256: sinpg ApaggS fnqyf INV1_YEAST : 272- 277: ghhfe AfdnqS rvvdf INV1_YEAST : 315- 319: nweys Afvp-S npwrs INV1_YEAST : 360- 364: lniss Agpw-S rfatn INV2_YEAST : 14- 18: llagf Aaki-S asmtn INV2_YEAST : 15- 20: lagfa AkisaS mtnet INV2_YEAST : 101- 105: rndsg Afsg-S mvvdy INV2_YEAST : 251- 256: sinpg ApaggS fnqyf INV2_YEAST : 272- 277: gthfe AfdnqS rvvdf INV2_YEAST : 360- 364: lnisn Agpw-S rfatn INV3_YEAST : 14- 18: llagf Aaki-S almtn INV4_YEAST : 14- 18: llagf Aaki-S almtn INV4_YEAST : 101- 105: rndsg Aysg-S mvidh INV4_YEAST : 251- 256: sinpg ApaggS fnqyf INV4_YEAST : 272- 277: gthfe AydnqS rvvdf INV4_YEAST : 375- 379: stltk Ansf-S vdlsn INV4_YEAST : 431- 435: rmgfe Asas-S ffldr INV5_YEAST : 14- 18: llagf Aaki-S almtn INV7_YEAST : 14- 18: llagf Aaki-S almtn INVA_DAUCA : 104- 108: gnivw Ahsv-S tdlin INVA_DAUCA : 120- 124: tplep Aifp-S kpfdk INVA_DAUCA : 205- 210: rdptt AwldkS ghwkm INVA_DAUCA : 227- 232: nrrgi AylyrS kdfik INVA_DAUCA : 347- 352: ilwgw AnesdS tahdv INVA_DAUCA : 446- 451: wleyd AekicS lkgst INVA_DAUCA : 499- 503: lmcsd Atrs-S lkegl INVA_PHAAU : 14- 18: ptssh Aapt-S strkd INVA_PHAAU : 14- 19: ptssh AaptsS trkdl INVA_PHAAU : 15- 19: tssha Apts-S trkdl INVA_PHAAU : 51- 55: sgvph Ahls-S ptsnh INVA_PHAAU : 258- 262: rdptt Awlt-S egkwr INVA_PHAAU : 415- 419: vtkgw Asvq-S iprtv INVA_PHAAU : 457- 461: fkslk Akpg-S vvsld INVA_PHAAU : 519- 524: gllvl AdeglS eytpv INVA_PHAAU : 622- 627: nnate AtvtaS lkvwq INVA_ZYMMO : 91- 95: lpval Apgd-S fdrdg INVA_ZYMMO : 196- 200: gighv Alyr-S enlkd INVA_ZYMMO : 489- 493: aiegy Avfd-S fkrwt INVA_ZYMMO : 505- 509: qdanl Aafl-S dac INVB_DAUCA : 45- 49: vlkgw Asvq-S ipr INV_SCHOC : 252- 257: wvmfl AinpgS plggs INV_SCHOC : 294- 299: gkdfy AfqtfS evehg INV_SCHOC : 348- 353: mlklt AnidkS vlpds RAFD_ECOLI : 11- 16: slaqs AleklS arrgn RAFD_ECOLI : 176- 180: wmvig Arda-S dngqv RAFD_ECOLI : 206- 210: vlahs Aage-S ymwec RAFD_ECOLI : 441- 445: vndge Atls-S riypq SACC_BACSU : 22- 27: tmafs AdaadS syyde SACC_BACSU : 24- 28: afsad Aads-S yyded SACC_BACSU : 251- 256: svgng AvsggS gmqyf SACC_BACSU : 290- 295: grdfy AavswS dipst SACC_BACSU : 291- 295: rdfya Avsw-S dipst SACC_BACSU : 388- 393: ayein AefkvS pgsaa SACC_BACSU : 576- 581: grgag AlmfrS dkdak SCRB_BACSU : 89- 93: kreei Alap-S dwfdk SCRB_BACSU : 159- 164: eailt AhfsrS evweh SCRB_BACSU : 188- 193: nlkgq AvlfaS dnlte SCRB_BACSU : 466- 470: evtas Atgk-S emnvg SCRB_KLEPN : 21- 25: qgqpq Alad-S hypqw SCRB_KLEPN : 363- 367: apmel Afdl-S pdstl SCRB_LACLA : 103- 107: tkydn Agvy-S gsala SCRB_LACLA : 296- 300: tqsfn Apdg-S ayais SCRB_LACLA : 301- 305: apdgs Ayai-S wlglp SCRB_PEDPE : 25- 30: lpqlv AqarqS kwrmq SCRB_PEDPE : 160- 164: iahap Agyt-S sfrdp SCRB_PEDPE : 160- 165: iahap AgytsS frdpd SCRB_PEDPE : 298- 302: apdgr Alav-S wiglp SCRB_PEDPE : 319- 323: drenw Ahcl-S lvkel SCRB_PEDPE : 363- 368: qratv AalngS felll SCRB_PEDPE : 364- 368: ratva Alng-S felll SCRB_PEDPE : 386- 391: vtvni AdqqeS gqlqv SCRB_SALTY : 21- 25: qgqpr Alad-S hyprw SCRB_SALTY : 71- 75: tfkcw Ahws-S idllh SCRB_SALTY : 347- 351: alrge Angw-S gnalp SCRB_STAXY : 124- 129: yymyt AnhrdS dwnri SCRB_STRMU : 70- 75: wpfga AhglkS wihte SCRB_STRMU : 105- 109: hdshg Aysg-S ayeig SCRB_STRMU : 245- 250: dtekp AlvdaS eiqnl SCRB_STRMU : 387- 392: ageqy AlefgS qrscs SCRB_VIBAL : 143- 147: ptqcf Atmd-S dgsie SCRB_VIBAL : 195- 199: ehgsm Alyq-S kdlkt SCRB_VIBAL : 321- 325: vthqw Agml-S lprel SCRB_ZYMMO : 91- 95: lpval Apgd-S fdrdg SCRB_ZYMMO : 196- 200: gighv Alyr-S enlkd SCRB_ZYMMO : 488- 492: aiegy Avfd-S fkrwt SCRB_ZYMMO : 504- 508: qdanl Aafs-S dac Number of patterns evaluated by Pratt:261 Total running time: 2 seconds