------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file GLYCOSYL_HYDROL_F3 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename GLYCOSYL_HYDROL_F3.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: BGL1_SACFI 876 BGL2_SACFI 880 BGL3_ASPWE 63 BGLB_CLOTM 754 BGLS_AGRTU 818 BGLS_BUTFI 830 BGLS_HANAN 825 BGLS_KLUMA 845 BGLS_RUMAL 947 BGLS_SCHCO 192 BGLX_ECOLI 765 Y959_HAEIN 351 YZBA_BACSU 642 Pratt run started at Thu Feb 6 19:37:33 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 17( 13) L-x(3)-G-x(3,4)-D 2: 11.5102 16( 13) V-x(2,4)-S-x(5)-G 3: 11.5102 48( 13) A-x(0,1)-A-x(3,4)-G 4: 11.5102 15( 13) S-x(2)-L-x(0,2)-L 5: 11.5102 38( 13) A-x(0,1)-V-x(1,2)-G 6: 11.5102 26( 13) A-x(3)-G-x(0,2)-L 7: 11.5102 27( 13) A-x(3,4)-G-x(1,2)-L 8: 11.5102 22( 13) A-x(2,3)-G-x(1,2)-L 9: 11.5102 28( 13) A-x(4)-A-x(0,2)-A 10: 11.5102 37( 13) A-x(3,4)-A-x(1,2)-A 11: 11.5102 20( 13) A-x(5)-L-x(0,2)-L 12: 11.5102 34( 13) A-x(2,3)-A-x(0,1)-V 13: 11.5102 31( 13) A-x(1,2)-A-x(2,3)-G 14: 11.5102 38( 13) A-x(0,2)-A-x(3)-G 15: 11.5102 22( 13) A-x(3)-G-x(1,3)-A 16: 11.5102 29( 13) A-A-x(2,4)-A 17: 11.5102 36( 13) A-x(0,1)-A-x(2,3)-A 18: 11.5102 37( 13) A-x(0,1)-A-x(2,3)-G 19: 11.5102 28( 13) A-x(3)-A-x(1,3)-V 20: 11.5102 21( 13) D-x(1,3)-A-x(3)-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 13.3934 18( 13) A-x(0,1)-V-x(1,2)-G-x(2)-[ADGSV] B 2: 13.3888 16( 13) A-x(2,3)-G-x(1,2)-L-[AGLPV] C 3: 13.1594 18( 13) A-x(3,4)-G-x(1,2)-L-[AGILPV] D 4: 12.9232 18( 13) A-A-x(2,4)-A-x-[ADGNSTV] E 5: 12.9232 22( 13) A-x(0,1)-A-x(2,3)-A-x-[ADGNSTV] F 6: 12.0102 17( 13) L-x(3)-G-x(3,4)-D G 7: 11.5102 16( 13) V-x(2,4)-S-x(5)-G H 8: 11.5102 48( 13) A-x(0,1)-A-x(3,4)-G I 9: 11.5102 15( 13) S-x(2)-L-x(0,2)-L J 10: 11.5102 26( 13) A-x(3)-G-x(0,2)-L K 11: 11.5102 28( 13) A-x(4)-A-x(0,2)-A L 12: 11.5102 37( 13) A-x(3,4)-A-x(1,2)-A M 13: 11.5102 20( 13) A-x(5)-L-x(0,2)-L N 14: 11.5102 34( 13) A-x(2,3)-A-x(0,1)-V O 15: 11.5102 31( 13) A-x(1,2)-A-x(2,3)-G P 16: 11.5102 38( 13) A-x(0,2)-A-x(3)-G Q 17: 11.5102 22( 13) A-x(3)-G-x(1,3)-A R 18: 11.5102 37( 13) A-x(0,1)-A-x(2,3)-G S 19: 11.5102 28( 13) A-x(3)-A-x(1,3)-V T 20: 11.5102 21( 13) D-x(1,3)-A-x(3)-A Best patterns with alignements: fitness hits(seqs) Pattern A 1: 13.3934 18( 13) A-x(0,1)-V-x(1,2)-G-x(2)-[ADGSV] Occurences: 18(13) BGL1_SACFI : 588- 596: hpnvt AiVwaGplG drsgt BGL2_SACFI : 592- 600: hpnvt AiVwaGplG drsgt BGL3_ASPWE : 18- 25: waahh AgVs-GalA glbmg BGLB_CLOTM : 264- 271: kkive A-VksGklS eniln BGLB_CLOTM : 407- 415: sssdv AvVfaGlpD eyese BGLS_AGRTU : 79- 87: elier AgValGgqA kskga BGLS_AGRTU : 331- 337: sfdqi A-Vi-GpnA asarv BGLS_AGRTU : 340- 347: pnaas ArVm-GggS ariaa BGLS_AGRTU : 340- 348: pnaas ArVmgGgsA riaah BGLS_BUTFI : 381- 388: klgkp AkVl-GgyA ktrll BGLS_BUTFI : 675- 682: gkqaa AmVr-GiqS nniia BGLS_HANAN : 255- 261: wpfae A-Vr-GgvS simcs BGLS_HANAN : 255- 262: wpfae A-VrgGvsS imcsy BGLS_KLUMA : 653- 661: lgnai AdVlyGdvV pngkl BGLS_RUMAL : 62- 69: gmvnv AkVt-GitD gliea BGLS_RUMAL : 207- 215: ggtgt ArVllGevS pcgkl BGLS_SCHCO : 113- 121: hpnvk AvVwsGlpG qeagn BGLX_ECOLI : 414- 420: ksati A-Vv-GplA dskrd Y959_HAEIN : 255- 262: lgmkg AgVm-GnfV erskk YZBA_BACSU : 579- 585: akali A-Vy-GfkG yangr B 2: 13.3888 16( 13) A-x(2,3)-G-x(1,2)-L-[AGLPV] Occurences: 16(13) BGL1_SACFI : 611- 618: ilfgk AnpsGh-LP ftiak BGL2_SACFI : 615- 622: ilfgn AnpsGh-LP ftvak BGL3_ASPWE : 18- 25: waahh AgvsGa-LA glbmg BGLB_CLOTM : 471- 479: ksvle AylgGqaLG grwrm BGLS_AGRTU : 46- 53: dgpng ArggGs-LV ggvks BGLS_AGRTU : 46- 53: dgpng Arg-GgsLV ggvks BGLS_BUTFI : 35- 43: elsce AaceGmvLL kndrn BGLS_BUTFI : 36- 43: lscea Ace-GmvLL kndrn BGLS_BUTFI : 372- 378: qlyys Apq-Gk-LG kpakv BGLS_HANAN : 332- 339: gnltt AvlnGt-LP qdrld BGLS_HANAN : 409- 416: valrs Ave-GvvLL knehe BGLS_KLUMA : 641- 649: nalvq AwygGneLG naiad BGLS_RUMAL : 436- 443: kvdea ArrlGy-LP aetay BGLS_SCHCO : 72- 80: rndll AwhdGdaLV qavad BGLX_ECOLI : 414- 420: ksati Avv-Gp-LA dskrd Y959_HAEIN : 268- 276: erskk AlnaGcdLL llcne YZBA_BACSU : 607- 614: aifgq AkpkGt-LP vdips C 3: 13.1594 18( 13) A-x(3,4)-G-x(1,2)-L-[AGILPV] Occurences: 18(13) BGL1_SACFI : 588- 596: hpnvt AivwaGp-LG drsgt BGL1_SACFI : 611- 618: ilfgk Anps-Gh-LP ftiak BGL2_SACFI : 530- 538: ivvvs AvsgeGy-LI idgnr BGL2_SACFI : 592- 600: hpnvt AivwaGp-LG drsgt BGL2_SACFI : 615- 622: ilfgn Anps-Gh-LP ftvak BGL3_ASPWE : 18- 25: waahh Agvs-Ga-LA glbmg BGLB_CLOTM : 471- 479: ksvle Aylg-GqaLG grwrm BGLS_AGRTU : 46- 53: dgpng Argg-Gs-LV ggvks BGLS_BUTFI : 35- 43: elsce Aace-GmvLL kndrn BGLS_HANAN : 332- 339: gnltt Avln-Gt-LP qdrld BGLS_KLUMA : 641- 649: nalvq Awyg-GneLG naiad BGLS_RUMAL : 435- 443: skvde AarrlGy-LP aetay BGLS_RUMAL : 436- 443: kvdea Arrl-Gy-LP aetay BGLS_SCHCO : 72- 80: rndll Awhd-GdaLV qavad BGLS_SCHCO : 135- 143: dilyg AynpsGr-LP ytiak BGLX_ECOLI : 537- 546: rdlia AlkatGkpLV lvlmn Y959_HAEIN : 268- 276: erskk Alna-GcdLL llcne YZBA_BACSU : 607- 614: aifgq Akpk-Gt-LP vdips D 4: 12.9232 18( 13) A-A-x(2,4)-A-x-[ADGNSTV] Occurences: 18(13) BGL1_SACFI : 356- 362: atril AAly--AtN sfpte BGL2_SACFI : 301- 309: vvsdw AAqmsgAyS aisgl BGL2_SACFI : 360- 366: atril AAly--AtN sfptk BGL3_ASPWE : 14- 20: vmsdw AAhh--AgV sgala BGLB_CLOTM : 73- 79: tcfps AAgl--AcS wdrel BGLS_AGRTU : 364- 371: legir AAlsn-AnS lrhav BGLS_BUTFI : 137- 143: dilad AAay--AdT aiiai BGLS_HANAN : 512- 519: alyad AAiev-AnS vagee BGLS_KLUMA : 402- 408: sslid AAkp--AdA enagl BGLS_KLUMA : 402- 410: sslid AAkpadAeN aglia BGLS_RUMAL : 13- 20: eylek AAevn-AeG avllv BGLS_RUMAL : 714- 721: dknnf AAmvr-AqN dvymv BGLS_SCHCO : 35- 41: sdtar AAqi--AaA advai BGLS_SCHCO : 35- 42: sdtar AAqia-AaA dvaiv BGLS_SCHCO : 35- 43: sdtar AAqiaaAaD vaivf BGLS_SCHCO : 39- 47: raaqi AAaadvAiV fissd BGLS_SCHCO : 40- 47: aaqia AAadv-AiV fissd BGLS_SCHCO : 41- 47: aqiaa AAdv--AiV fissd BGLX_ECOLI : 536- 542: qrdli AAlk--AtG kplvl Y959_HAEIN : 105- 112: agwqm AAemi-AlD idlsf YZBA_BACSU : 568- 576: rnpyd AAnfeeAkA liavy E 5: 12.9232 22( 13) A-x(0,1)-A-x(2,3)-A-x-[ADGNSTV] Occurences: 22(13) BGL1_SACFI : 57- 65: dvwqe AyArakAiV gqmti BGL1_SACFI : 356- 362: atril A-Aly-AtN sfpte BGL2_SACFI : 360- 366: atril A-Aly-AtN sfptk BGL2_SACFI : 561- 569: dnlik AvAencAnT vvvit BGL3_ASPWE : 14- 20: vmsdw A-Ahh-AgV sgala BGLB_CLOTM : 73- 79: tcfps A-Agl-AcS wdrel BGLS_AGRTU : 364- 371: legir A-AlsnAnS lrhav BGLS_BUTFI : 135- 143: pedil AdAaayAdT aiiai BGLS_BUTFI : 137- 143: dilad A-Aay-AdT aiiai BGLS_BUTFI : 345- 352: sdsdl AdAiv-AsV tvtni BGLS_HANAN : 512- 519: alyad A-AievAnS vagee BGLS_KLUMA : 402- 408: sslid A-Akp-AdA enagl BGLS_RUMAL : 13- 20: eylek A-AevnAeG avllv BGLS_RUMAL : 714- 721: dknnf A-AmvrAqN dvymv BGLS_SCHCO : 33- 41: sdsdt ArAaqiAaA advai BGLS_SCHCO : 35- 41: sdtar A-Aqi-AaA advai BGLS_SCHCO : 35- 42: sdtar A-AqiaAaA dvaiv BGLS_SCHCO : 39- 47: raaqi AaAadvAiV fissd BGLS_SCHCO : 40- 47: aaqia AaAdv-AiV fissd BGLS_SCHCO : 40- 47: aaqia A-AadvAiV fissd BGLS_SCHCO : 41- 47: aqiaa A-Adv-AiV fissd BGLX_ECOLI : 536- 542: qrdli A-Alk-AtG kplvl Y959_HAEIN : 105- 112: agwqm A-AemiAlD idlsf YZBA_BACSU : 26- 34: arqte AsAskrAiD anqiv F 6: 12.0102 17( 13) L-x(3)-G-x(3,4)-D Occurences: 17(13) BGL1_SACFI : 286- 295: llkee LgfqGfvvsD wgaql BGL2_SACFI : 290- 299: llkee LgfqGfvvsD waaqm BGL2_SACFI : 537- 545: sgegy LiidGnrg-D knnvt BGL3_ASPWE : 3- 12: az LgfzGfvmsD waahh BGLB_CLOTM : 649- 658: esgef LiliGrssrD ivlke BGLS_AGRTU : 239- 247: nagld LempGpwr-D rgekl BGLS_AGRTU : 459- 468: aglar LfvdGelvvD gydgw BGLS_BUTFI : 174- 183: ceakd LveqGnkifD hgdfy BGLS_HANAN : 290- 299: llkee LgfqGfvmtD wgaly BGLS_HANAN : 354- 363: rilsa LiysGvhnpD gpnyn BGLS_KLUMA : 818- 826: eagey LvsvGtss-D dilsv BGLS_KLUMA : 818- 827: eagey LvsvGtssdD ilsvk BGLS_RUMAL : 24- 33: egavl LvnnGvlplD knavt BGLS_RUMAL : 172- 180: skmvi LlnvGnii-D mgfid BGLS_SCHCO : 58- 66: sgegy LtveGnag-D rndll BGLX_ECOLI : 294- 302: gaike LikhGtaa-D pedav Y959_HAEIN : 239- 248: ilrkk LnfqGtifsD dlgmk YZBA_BACSU : 164- 172: iigke LsalGint-D fspvv G 7: 11.5102 16( 13) V-x(2,4)-S-x(5)-G Occurences: 16(13) BGL1_SACFI : 522- 531: ahlsi Vvv--SaasgeG yitvd BGL2_SACFI : 526- 535: ahmsi Vvv--SavsgeG yliid BGL3_ASPWE : 36- 46: smpgb Vbyb-SgtsywG tnlti BGLB_CLOTM : 686- 697: saved VmsdsSaaavlG pvlke BGLS_AGRTU : 186- 195: agvka Vms--SynklnG tytse BGLS_BUTFI : 765- 774: wgfeg Vvv--SdwwgfG ehyke BGLS_HANAN : 139- 149: iydra Vaig-SefkgkG adail BGLS_KLUMA : 383- 393: evdyt Vgay-ShksigG laess BGLS_RUMAL : 848- 858: laqmp Vtvf-SmgtawG tftwn BGLS_SCHCO : 47- 56: advai Vfi--SsdsgeG yltve BGLX_ECOLI : 159- 168: twapm Vdv--SrdprwG raseg BGLX_ECOLI : 435- 445: wsaag Vadq-SvtvltG iknav Y959_HAEIN : 18- 28: leqee Vell-ShplvaG lilft YZBA_BACSU : 39- 49: danqi Vnrm-SldeklG qmlmp YZBA_BACSU : 292- 303: gsdil VpatlSkkvmtG llrqe YZBA_BACSU : 386- 397: qinns VeriiSlkikrG mypar H 8: 11.5102 48( 13) A-x(0,1)-A-x(3,4)-G Occurences: 48(13) BGL1_SACFI : 59- 66: wqeay ArAkaivG qmtiv BGL1_SACFI : 185- 192: ylqgt AaAatikG lqenn BGL1_SACFI : 186- 192: lqgta AaAtik-G lqenn BGL1_SACFI : 186- 192: lqgta A-AatikG lqenn BGL1_SACFI : 187- 192: qgtaa A-Atik-G lqenn BGL1_SACFI : 526- 531: ivvvs A-Asge-G yitvd BGL1_SACFI : 602- 609: drsgt AiAnilfG kanps BGL2_SACFI : 187- 194: ylqgi AaAatikG lqenn BGL2_SACFI : 188- 194: lqgia AaAtik-G lqenn BGL2_SACFI : 188- 194: lqgia A-AatikG lqenn BGL2_SACFI : 189- 194: qgiaa A-Atik-G lqenn BGL2_SACFI : 301- 306: vvsdw A-Aqms-G aysai BGL2_SACFI : 606- 613: drsgt AiAnilfG nanps BGL3_ASPWE : 14- 19: vmsdw A-Ahha-G vsgal BGL3_ASPWE : 23- 30: agvsg AlAglbmG smpgb BGLB_CLOTM : 135- 141: lssel A-AshikG vqsqg BGLB_CLOTM : 692- 697: msdss A-Aavl-G pvlke BGLS_AGRTU : 126- 132: ltaac AvAyin-G vqsqg BGLS_AGRTU : 254- 259: geklv A-Avre-G kvkae BGLS_AGRTU : 338- 344: igpna AsArvm-G ggsar BGLS_AGRTU : 338- 345: igpna AsArvmgG gsari BGLS_AGRTU : 620- 627: qelgn AlAdvlfG dvepa BGLS_BUTFI : 244- 251: ieggl AaArillG kvnps BGLS_BUTFI : 245- 251: eggla A-ArillG kvnps BGLS_BUTFI : 331- 338: aepfv AsAadevG ksdsd BGLS_BUTFI : 333- 338: pfvas A-Adev-G ksdsd BGLS_BUTFI : 673- 679: lagkq AaAmvr-G iqsnn BGLS_BUTFI : 673- 679: lagkq A-AamvrG iqsnn BGLS_BUTFI : 674- 679: agkqa A-Amvr-G iqsnn BGLS_HANAN : 165- 170: pmgvk A-Aggr-G weghg BGLS_HANAN : 253- 259: ylwpf AeAvrg-G vssim BGLS_HANAN : 754- 759: gpksl A-Aggl-G gnhtc BGLS_HANAN : 754- 760: gpksl A-AgglgG nhtcg BGLS_KLUMA : 95- 100: siakn A-Avil-G pttnm BGLS_KLUMA : 233- 239: gtytt AaAikn-G ldief BGLS_KLUMA : 233- 239: gtytt A-AaiknG ldief BGLS_KLUMA : 234- 239: tytta A-Aikn-G ldief BGLS_KLUMA : 346- 353: vigpn AkAktssG ggsas BGLS_KLUMA : 406- 412: daakp AdAena-G liakf BGLS_KLUMA : 651- 658: nelgn AiAdvlyG dvvpn BGLS_RUMAL : 322- 328: cklgk A-ArvlcG fektk BGLS_RUMAL : 435- 440: skvde A-Arrl-G ylpae BGLS_RUMAL : 497- 502: vtpgt A-Aafg-G vakhl BGLS_RUMAL : 600- 606: ltgtm AaAele-G lhsvg BGLS_RUMAL : 600- 606: ltgtm A-AaeleG lhsvg BGLS_RUMAL : 601- 606: tgtma A-Aele-G lhsvg BGLS_RUMAL : 739- 744: sdnvi A-Alad-G rltra BGLS_RUMAL : 767- 773: mmsth AmArkl-G edeav BGLS_SCHCO : 14- 20: ldait ArAqed-G ttvts BGLX_ECOLI : 18- 25: lalqp AlAddlfG nhplt BGLX_ECOLI : 536- 542: qrdli A-AlkatG kplvl BGLX_ECOLI : 580- 587: teggn AiAdvlfG dynps Y959_HAEIN : 146- 152: savnl AtAfid-G mhqag YZBA_BACSU : 324- 330: alnmk AiAdhf-G qeeav YZBA_BACSU : 412- 419: tkeki AkAkkivG skqhl I 9: 11.5102 15( 13) S-x(2)-L-x(0,2)-L Occurences: 15(13) BGL1_SACFI : 418- 422: kvaee SivL--L knenn BGL2_SACFI : 422- 426: kvaee SivL--L knekn BGL3_ASPWE : 21- 27: hhagv SgaLagL bmgsm BGLB_CLOTM : 315- 319: qaaae SmvL--L knedd BGLS_AGRTU : 423- 428: wfdlp SgdLd-L adfsa BGLS_BUTFI : 748- 752: qrsse ShdL--L tgilr BGLS_HANAN : 279- 285: hacqn SylLnyL lkeel BGLS_KLUMA : 204- 208: dhcsq SkkL--L idilr BGLS_KLUMA : 320- 324: eiaad SivL--L knknn BGLS_RUMAL : 936- 940: kanfq SkkL--L rgrra BGLS_SCHCO : 171- 175: pdidy SegL--L vdyrh BGLX_ECOLI : 325- 331: sdeyy SkyLpgL iksgk BGLX_ECOLI : 394- 398: evare SlvL--L knrle Y959_HAEIN : 2- 8: m SslLidL kgkel YZBA_BACSU : 10- 15: fplil SavLf-L scffg J 10: 11.5102 26( 13) A-x(3)-G-x(0,2)-L Occurences: 26(13) BGL1_SACFI : 188- 193: gtaaa AtikG--L qennv BGL1_SACFI : 611- 617: ilfgk AnpsGh-L pftia BGL1_SACFI : 668- 673: iepry AfgyG--L syney BGL2_SACFI : 190- 195: giaaa AtikG--L qennv BGL2_SACFI : 615- 621: ilfgn AnpsGh-L pftva BGL2_SACFI : 672- 677: iepry AfgyG--L syney BGL3_ASPWE : 18- 24: waahh AgvsGa-L aglbm BGLB_CLOTM : 264- 270: kkive AvksGk-L senil BGLB_CLOTM : 471- 478: ksvle AylgGqaL ggrwr BGLB_CLOTM : 693- 700: sdssa AavlGpvL keitd BGLS_AGRTU : 46- 52: dgpng ArggGs-L vggvk BGLS_BUTFI : 35- 42: elsce AaceGmvL lkndr BGLS_HANAN : 309- 314: ysgid AanaG--L dmdmp BGLS_HANAN : 322- 329: dmpce AqyfGgnL ttavl BGLS_HANAN : 332- 338: gnltt AvlnGt-L pqdrl BGLS_KLUMA : 235- 240: yttaa AiknG--L diefp BGLS_KLUMA : 408- 413: akpad AenaG--L iakfy BGLS_KLUMA : 641- 648: nalvq AwygGneL gnaia BGLS_KLUMA : 711- 718: lqrkv AfpfGygL syttf BGLS_RUMAL : 436- 442: kvdea ArrlGy-L paeta BGLS_RUMAL : 602- 607: gtmaa AeleG--L hsvgv BGLS_RUMAL : 740- 746: dnvia AladGr-L trael BGLS_SCHCO : 72- 79: rndll AwhdGdaL vqava BGLX_ECOLI : 146- 151: vsaye AaddG--L nmtwa Y959_HAEIN : 268- 275: erskk AlnaGcdL lllcn YZBA_BACSU : 607- 613: aifgq AkpkGt-L pvdip K 11: 11.5102 28( 13) A-x(4)-A-x(0,2)-A Occurences: 28(13) BGL1_SACFI : 351- 357: rlddm AtrilA--A lyatn BGL2_SACFI : 302- 310: vsdwa AqmsgAysA isgld BGL2_SACFI : 355- 361: rlddm AtrilA--A lyatn BGL3_ASPWE : 18- 25: waahh AgvsgAl-A glbmg BGLB_CLOTM : 303- 311: qyeqd AhhrlArqA aaesm BGLB_CLOTM : 714- 720: idmdn AhdmmA--A niknm BGLS_AGRTU : 59- 66: ggvks AcfpvAi-A lgatw BGLS_AGRTU : 263- 270: egkvk AetvrAs-A rrill BGLS_AGRTU : 490- 496: seqrr AvtlgA--A rryrv BGLS_AGRTU : 753- 761: elraf AklklApgA tgtav BGLS_AGRTU : 781- 788: yfdve AgrfrAd-A gkyel BGLS_BUTFI : 139- 147: ladaa AyadtAiiA isrfs BGLS_BUTFI : 326- 333: ledyk AepfvAs-A adevg BGLS_BUTFI : 326- 334: ledyk AepfvAsaA devgk BGLS_BUTFI : 669- 675: edpfl AgkqaA--A mvrgi BGLS_HANAN : 477- 484: yfvtp AdgigAr-A qqeki BGLS_HANAN : 502- 510: swnqa AamdsAlyA daaie BGLS_HANAN : 507- 513: aamds AlyadA--A ievan BGLS_KLUMA : 87- 95: agklm AkesiAknA avilg BGLS_KLUMA : 403- 411: slida AkpadAenA gliak BGLS_RUMAL : 13- 21: eylek AaevnAegA vllvn BGLS_SCHCO : 35- 41: sdtar AaqiaA--A advai BGLS_SCHCO : 35- 42: sdtar AaqiaAa-A dvaiv BGLS_SCHCO : 36- 42: dtara AqiaaA--A dvaiv BGLX_ECOLI : 340- 346: gkvtm AelddA--A rhvln Y959_HAEIN : 100- 106: sfake AgwqmA--A emial YZBA_BACSU : 21- 28: scffg ArqteAs-A skrai YZBA_BACSU : 319- 326: vivtd AlnmkAi-A dhfgq YZBA_BACSU : 426- 434: kqhlk AekklAekA vtvlk YZBA_BACSU : 569- 576: npyda AnfeeAk-A liavy L 12: 11.5102 37( 13) A-x(3,4)-A-x(1,2)-A Occurences: 37(13) BGL1_SACFI : 11- 17: qllvf Algl-Av-A vpiqn BGL1_SACFI : 57- 63: dvwqe Ayar-Ak-A ivgqm BGL2_SACFI : 59- 65: gvwqd Aytk-Ak-A lvsqm BGL2_SACFI : 302- 310: vsdwa AqmsgAysA isgld BGL3_ASPWE : 18- 25: waahh AgvsgAl-A glbmg BGLB_CLOTM : 303- 311: qyeqd AhhrlArqA aaesm BGLS_AGRTU : 59- 66: ggvks AcfpvAi-A lgatw BGLS_AGRTU : 120- 126: ysedp Alta-Ac-A vayin BGLS_AGRTU : 263- 270: egkvk AetvrAs-A rrill BGLS_AGRTU : 286- 293: gafek Apdl-AehA ldlpe BGLS_AGRTU : 753- 761: elraf AklklApgA tgtav BGLS_AGRTU : 781- 788: yfdve AgrfrAd-A gkyel BGLS_BUTFI : 135- 141: pedil Adaa-Ay-A dtaii BGLS_BUTFI : 137- 144: dilad Aaay-AdtA iiais BGLS_BUTFI : 139- 147: ladaa AyadtAiiA isrfs BGLS_BUTFI : 326- 333: ledyk AepfvAs-A adevg BGLS_BUTFI : 326- 334: ledyk AepfvAsaA devgk BGLS_BUTFI : 669- 675: edpfl Agkq-Aa-A mvrgi BGLS_HANAN : 477- 484: yfvtp AdgigAr-A qqeki BGLS_HANAN : 502- 510: swnqa AamdsAlyA daaie BGLS_HANAN : 503- 510: wnqaa Amds-AlyA daaie BGLS_KLUMA : 87- 95: agklm AkesiAknA avilg BGLS_KLUMA : 402- 408: sslid Aakp-Ad-A enagl BGLS_KLUMA : 403- 411: slida AkpadAenA gliak BGLS_RUMAL : 13- 21: eylek AaevnAegA vllvn BGLS_RUMAL : 14- 21: yleka Aevn-AegA vllvn BGLS_SCHCO : 35- 41: sdtar Aaqi-Aa-A advai BGLS_SCHCO : 35- 42: sdtar AaqiaAa-A dvaiv BGLS_SCHCO : 35- 42: sdtar Aaqi-AaaA dvaiv BGLS_SCHCO : 36- 42: dtara Aqia-Aa-A dvaiv BGLS_SCHCO : 78- 84: whdgd Alvq-Av-A danen BGLX_ECOLI : 14- 20: iavsl Alqp-Al-A ddlfg BGLX_ECOLI : 512- 519: avvge Aqgm-AheA ssrtd Y959_HAEIN : 142- 148: sdvks Avnl-At-A fidgm YZBA_BACSU : 21- 28: scffg ArqteAs-A skrai YZBA_BACSU : 28- 35: qteas Askr-AidA nqivn YZBA_BACSU : 319- 326: vivtd AlnmkAi-A dhfgq YZBA_BACSU : 334- 341: fgqee Avvm-AvkA gvdia YZBA_BACSU : 426- 434: kqhlk AekklAekA vtvlk YZBA_BACSU : 569- 576: npyda AnfeeAk-A liavy M 13: 11.5102 20( 13) A-x(5)-L-x(0,2)-L Occurences: 20(13) BGL1_SACFI : 128- 136: glatg AtfnkdLf-L qrgqa BGL1_SACFI : 415- 422: talkv AeesivL--L knenn BGL2_SACFI : 130- 138: gmatg AtfnkdLf-L qrgqa BGL2_SACFI : 419- 426: talkv AeesivL--L knekn BGL3_ASPWE : 18- 27: waahh AgvsgaLagL bmgsm BGLB_CLOTM : 98- 105: geecq AenvsiL--L gpgan BGLB_CLOTM : 312- 319: larqa AaesmvL--L knedd BGLS_AGRTU : 268- 275: aetvr AsarriL--L llerv BGLS_AGRTU : 268- 276: aetvr AsarriLl-L lervg BGLS_AGRTU : 268- 277: aetvr AsarriLllL ervga BGLS_AGRTU : 270- 277: tvras ArrillL--L ervga BGLS_BUTFI : 36- 43: lscea AcegmvL--L kndrn BGLS_BUTFI : 607- 614: gvvtt AfpcstL--L actwn BGLS_HANAN : 275- 282: lngsh AcqnsyL--L nyllk BGLS_HANAN : 409- 416: valrs AvegvvL--L knehe BGLS_KLUMA : 317- 324: llrei AadsivL--L knknn BGLS_RUMAL : 563- 570: glemr AnkvdcL--L gpgmn BGLS_SCHCO : 64- 71: tvegn AgdrndL--L awhdg BGLX_ECOLI : 263- 270: lngtp AtsdswL--L kdvlr BGLX_ECOLI : 391- 398: earev AreslvL--L knrle Y959_HAEIN : 271- 278: kkaln AgcdllL--L cnere YZBA_BACSU : 112- 120: ddyqk AspkipLm-L sidqe N 14: 11.5102 34( 13) A-x(2,3)-A-x(0,1)-V Occurences: 34(13) BGL1_SACFI : 11- 16: qllvf AlglA-V avpiq BGL1_SACFI : 59- 65: wqeay ArakAiV gqmti BGL1_SACFI : 154- 159: kgvhi AlgpA-V gplgv BGL2_SACFI : 156- 161: kgvhi AlgpA-V gplgv BGL3_ASPWE : 14- 20: vmsdw AahhAgV sgala BGL3_ASPWE : 15- 20: msdwa Ahh-AgV sgala BGLB_CLOTM : 335- 341: ksgti AligAfV kkpry BGLS_AGRTU : 123- 127: dpalt Aac-A-V aying BGLS_AGRTU : 177- 183: ppfee AvkkAgV kavms BGLS_AGRTU : 181- 186: eavkk AgvkA-V mssyn BGLS_AGRTU : 308- 312: irqlg Aeg-A-V llknd BGLS_AGRTU : 337- 342: vigpn Aas-ArV mgggs BGLS_AGRTU : 761- 766: klapg AtgtA-V lkiap BGLS_BUTFI : 347- 352: sdlad Aiv-AsV tvtni BGLS_HANAN : 405- 410: inrav AlrsA-V egvvl BGLS_KLUMA : 92- 97: akesi AknaA-V ilgpt BGLS_KLUMA : 92- 97: akesi Akn-AaV ilgpt BGLS_RUMAL : 18- 22: aaevn Aeg-A-V llvnn BGLS_SCHCO : 39- 44: raaqi Aaa-AdV aivfi BGLS_SCHCO : 41- 47: aqiaa AadvAiV fissd BGLS_SCHCO : 42- 47: qiaaa Adv-AiV fissd BGLS_SCHCO : 78- 83: whdgd AlvqA-V adane BGLX_ECOLI : 33- 38: pltpe Ard-AfV tellk BGLX_ECOLI : 211- 216: svkhf AaygA-V eggke BGLX_ECOLI : 212- 216: vkhfa Ayg-A-V eggke BGLX_ECOLI : 246- 251: kagld AgsgA-V mvaln BGLX_ECOLI : 411- 415: plkks Ati-A-V vgpla BGLX_ECOLI : 411- 416: plkks Ati-AvV gplad BGLX_ECOLI : 459- 464: gkvly Akg-AnV tsdkg Y959_HAEIN : 208- 214: qnkld AimpAhV iysqc YZBA_BACSU : 334- 339: fgqee AvvmA-V kagvd YZBA_BACSU : 338- 343: eavvm Avk-AgV dialm YZBA_BACSU : 346- 352: agvdi AlmpAsV tslke YZBA_BACSU : 367- 372: arviq AlkeA-V kngdi YZBA_BACSU : 431- 435: aekkl Aek-A-V tvlkn YZBA_BACSU : 576- 580: feeak Ali-A-V ygfkg O 15: 11.5102 31( 13) A-x(1,2)-A-x(2,3)-G Occurences: 31(13) BGL1_SACFI : 61- 66: eayar Ak-Aiv-G qmtiv BGL1_SACFI : 185- 192: ylqgt AaaAtikG lqenn BGL1_SACFI : 186- 192: lqgta Aa-AtikG lqenn BGL2_SACFI : 187- 194: ylqgi AaaAtikG lqenn BGL2_SACFI : 188- 194: lqgia Aa-AtikG lqenn BGL2_SACFI : 307- 313: aqmsg AysAis-G ldmsm BGL3_ASPWE : 15- 22: msdwa AhhAgvsG alagl BGLB_CLOTM : 692- 697: msdss Aa-Avl-G pvlke BGLS_AGRTU : 79- 85: elier AgvAlg-G qaksk BGLS_AGRTU : 126- 132: ltaac Av-AyinG vqsqg BGLS_AGRTU : 337- 344: vigpn AasArvmG ggsar BGLS_AGRTU : 338- 344: igpna As-ArvmG ggsar BGLS_AGRTU : 507- 514: vveye ApkAsldG inica BGLS_BUTFI : 331- 338: aepfv AsaAdevG ksdsd BGLS_BUTFI : 673- 679: lagkq Aa-AmvrG iqsnn BGLS_HANAN : 150- 155: fkgkg Ad-Ail-G pvygp BGLS_HANAN : 253- 258: ylwpf Ae-Avr-G gvssi BGLS_HANAN : 253- 259: ylwpf Ae-AvrgG vssim BGLS_KLUMA : 233- 239: gtytt Aa-AiknG ldief BGLS_KLUMA : 406- 412: daakp Ad-AenaG liakf BGLS_RUMAL : 444- 450: lgylp AetAyt-G dkgia BGLS_RUMAL : 497- 502: vtpgt Aa-Afg-G vakhl BGLS_RUMAL : 600- 606: ltgtm Aa-AeleG lhsvg BGLS_RUMAL : 767- 773: mmsth Am-ArklG edeav BGLS_SCHCO : 14- 20: ldait Ar-AqedG ttvts BGLX_ECOLI : 143- 150: vgrvs AyeAaddG lnmtw BGLX_ECOLI : 212- 218: vkhfa AygAve-G gkeyn BGLX_ECOLI : 212- 219: vkhfa AygAvegG keynt BGLX_ECOLI : 411- 417: plkks AtiAvv-G plads Y959_HAEIN : 146- 152: savnl At-AfidG mhqag Y959_HAEIN : 156- 162: dgmhq AgmAst-G khfpg YZBA_BACSU : 324- 330: alnmk Ai-AdhfG qeeav YZBA_BACSU : 576- 582: feeak AliAvy-G fkgya P 16: 11.5102 38( 13) A-x(0,2)-A-x(3)-G Occurences: 38(13) BGL1_SACFI : 185- 192: ylqgt AaaAtikG lqenn BGL1_SACFI : 186- 192: lqgta Aa-AtikG lqenn BGL1_SACFI : 187- 192: qgtaa A--AtikG lqenn BGL1_SACFI : 526- 531: ivvvs A--AsgeG yitvd BGL2_SACFI : 187- 194: ylqgi AaaAtikG lqenn BGL2_SACFI : 188- 194: lqgia Aa-AtikG lqenn BGL2_SACFI : 189- 194: qgiaa A--AtikG lqenn BGL2_SACFI : 301- 306: vvsdw A--AqmsG aysai BGL3_ASPWE : 14- 19: vmsdw A--AhhaG vsgal BGL3_ASPWE : 15- 22: msdwa AhhAgvsG alagl BGLB_CLOTM : 692- 697: msdss A--AavlG pvlke BGLS_AGRTU : 126- 132: ltaac Av-AyinG vqsqg BGLS_AGRTU : 254- 259: geklv A--AvreG kvkae BGLS_AGRTU : 337- 344: vigpn AasArvmG ggsar BGLS_AGRTU : 338- 344: igpna As-ArvmG ggsar BGLS_AGRTU : 507- 514: vveye ApkAsldG inica BGLS_BUTFI : 331- 338: aepfv AsaAdevG ksdsd BGLS_BUTFI : 333- 338: pfvas A--AdevG ksdsd BGLS_BUTFI : 673- 679: lagkq Aa-AmvrG iqsnn BGLS_BUTFI : 674- 679: agkqa A--AmvrG iqsnn BGLS_HANAN : 165- 170: pmgvk A--AggrG weghg BGLS_HANAN : 253- 259: ylwpf Ae-AvrgG vssim BGLS_HANAN : 754- 759: gpksl A--AgglG gnhtc BGLS_KLUMA : 95- 100: siakn A--AvilG pttnm BGLS_KLUMA : 233- 239: gtytt Aa-AiknG ldief BGLS_KLUMA : 234- 239: tytta A--AiknG ldief BGLS_KLUMA : 406- 412: daakp Ad-AenaG liakf BGLS_RUMAL : 435- 440: skvde A--ArrlG ylpae BGLS_RUMAL : 497- 502: vtpgt A--AafgG vakhl BGLS_RUMAL : 600- 606: ltgtm Aa-AeleG lhsvg BGLS_RUMAL : 601- 606: tgtma A--AeleG lhsvg BGLS_RUMAL : 739- 744: sdnvi A--AladG rltra BGLS_RUMAL : 767- 773: mmsth Am-ArklG edeav BGLS_SCHCO : 14- 20: ldait Ar-AqedG ttvts BGLX_ECOLI : 143- 150: vgrvs AyeAaddG lnmtw BGLX_ECOLI : 212- 219: vkhfa AygAvegG keynt Y959_HAEIN : 146- 152: savnl At-AfidG mhqag YZBA_BACSU : 324- 330: alnmk Ai-AdhfG qeeav Q 17: 11.5102 22( 13) A-x(3)-G-x(1,3)-A Occurences: 22(13) BGL1_SACFI : 298- 306: vsdwg AqlsGvysA isgld BGL2_SACFI : 302- 310: vsdwa AqmsGaysA isgld BGL3_ASPWE : 15- 23: msdwa AhhaGvsgA laglb BGL3_ASPWE : 18- 25: waahh AgvsGal-A glbmg BGLB_CLOTM : 471- 477: ksvle AylgGq--A lggrw BGLS_AGRTU : 255- 263: eklva AvreGkvkA etvra BGLS_AGRTU : 340- 348: pnaas ArvmGggsA riaah BGLS_AGRTU : 490- 496: seqrr AvtlGa--A rryrv BGLS_BUTFI : 381- 388: klgkp AkvlGgy-A ktrll BGLS_HANAN : 302- 309: mtdwg AlysGid-A anagl BGLS_HANAN : 302- 310: mtdwg AlysGidaA nagld BGLS_HANAN : 477- 484: yfvtp AdgiGar-A qqeki BGLS_KLUMA : 408- 415: akpad AenaGli-A kfysn BGLS_RUMAL : 436- 444: kvdea ArrlGylpA etayt BGLS_RUMAL : 497- 504: vtpgt AaafGgv-A khlee BGLS_RUMAL : 498- 504: tpgta AafgGv--A khlee BGLS_RUMAL : 769- 777: stham ArklGedeA vevin BGLS_SCHCO : 72- 78: rndll AwhdGd--A lvqav BGLX_ECOLI : 573- 580: letwf AgteGgn-A iadvl Y959_HAEIN : 97- 105: eqvsf AkeaGwqmA aemia Y959_HAEIN : 148- 156: vnlat AfidGmhqA gmast YZBA_BACSU : 326- 334: nmkai AdhfGqeeA vvmav YZBA_BACSU : 338- 346: eavvm AvkaGvdiA lmpas R 18: 11.5102 37( 13) A-x(0,1)-A-x(2,3)-G Occurences: 37(13) BGL1_SACFI : 61- 66: eayar AkAiv-G qmtiv BGL1_SACFI : 186- 192: lqgta AaAtikG lqenn BGL1_SACFI : 187- 192: qgtaa A-AtikG lqenn BGL1_SACFI : 526- 531: ivvvs A-AsgeG yitvd BGL2_SACFI : 188- 194: lqgia AaAtikG lqenn BGL2_SACFI : 189- 194: qgiaa A-AtikG lqenn BGL2_SACFI : 301- 306: vvsdw A-AqmsG aysai BGL3_ASPWE : 14- 19: vmsdw A-AhhaG vsgal BGLB_CLOTM : 692- 697: msdss AaAvl-G pvlke BGLB_CLOTM : 692- 697: msdss A-AavlG pvlke BGLB_CLOTM : 693- 697: sdssa A-Avl-G pvlke BGLS_AGRTU : 126- 132: ltaac AvAyinG vqsqg BGLS_AGRTU : 254- 259: geklv A-AvreG kvkae BGLS_AGRTU : 338- 344: igpna AsArvmG ggsar BGLS_BUTFI : 35- 39: elsce A-Ace-G mvllk BGLS_BUTFI : 333- 338: pfvas A-AdevG ksdsd BGLS_BUTFI : 673- 679: lagkq AaAmvrG iqsnn BGLS_BUTFI : 674- 679: agkqa A-AmvrG iqsnn BGLS_HANAN : 150- 155: fkgkg AdAil-G pvygp BGLS_HANAN : 165- 170: pmgvk A-AggrG weghg BGLS_HANAN : 253- 258: ylwpf AeAvr-G gvssi BGLS_HANAN : 253- 259: ylwpf AeAvrgG vssim BGLS_HANAN : 309- 313: ysgid A-Ana-G ldmdm BGLS_HANAN : 754- 759: gpksl A-AgglG gnhtc BGLS_KLUMA : 95- 100: siakn A-AvilG pttnm BGLS_KLUMA : 233- 239: gtytt AaAiknG ldief BGLS_KLUMA : 234- 239: tytta A-AiknG ldief BGLS_KLUMA : 406- 412: daakp AdAenaG liakf BGLS_RUMAL : 435- 440: skvde A-ArrlG ylpae BGLS_RUMAL : 497- 501: vtpgt A-Aaf-G gvakh BGLS_RUMAL : 497- 502: vtpgt AaAfg-G vakhl BGLS_RUMAL : 497- 502: vtpgt A-AafgG vakhl BGLS_RUMAL : 498- 502: tpgta A-Afg-G vakhl BGLS_RUMAL : 600- 606: ltgtm AaAeleG lhsvg BGLS_RUMAL : 601- 606: tgtma A-AeleG lhsvg BGLS_RUMAL : 739- 744: sdnvi A-AladG rltra BGLS_RUMAL : 767- 773: mmsth AmArklG edeav BGLS_SCHCO : 14- 20: ldait ArAqedG ttvts BGLX_ECOLI : 146- 150: vsaye A-Add-G lnmtw Y959_HAEIN : 146- 152: savnl AtAfidG mhqag YZBA_BACSU : 324- 330: alnmk AiAdhfG qeeav S 19: 11.5102 28( 13) A-x(3)-A-x(1,3)-V Occurences: 28(13) BGL1_SACFI : 11- 18: qllvf AlglAva-V piqny BGL1_SACFI : 57- 65: dvwqe AyarAkaiV gqmti BGL1_SACFI : 59- 65: wqeay ArakAi--V gqmti BGL1_SACFI : 559- 566: lietv AencAnt-V vvvts BGL1_SACFI : 559- 567: lietv AencAntvV vvtst BGL1_SACFI : 683- 691: yevsn AkvsAakkV deelp BGL2_SACFI : 59- 67: gvwqd AytkAkalV sqmti BGL2_SACFI : 563- 570: likav AencAnt-V vvits BGL2_SACFI : 563- 571: likav AencAntvV vitst BGL2_SACFI : 687- 695: ykvsn AkvsAakkV deelp BGL3_ASPWE : 14- 20: vmsdw AahhAg--V sgala BGLB_CLOTM : 186- 194: asfen AvkkArpwV vmcay BGLB_CLOTM : 335- 341: ksgti AligAf--V kkpry BGLS_AGRTU : 120- 127: ysedp AltaAca-V aying BGLS_AGRTU : 177- 183: ppfee AvkkAg--V kavms BGLS_AGRTU : 348- 356: mgggs AriaAhytV spleg BGLS_AGRTU : 433- 440: ladfs ArmtAtf-V pqetg BGLS_BUTFI : 669- 677: edpfl AgkqAaamV rgiqs BGLS_HANAN : 56- 64: gkwqa AfyrArelV dqmsi BGLS_HANAN : 405- 413: inrav AlrsAvegV vllkn BGLS_HANAN : 513- 520: lyada AievAns-V ageei BGLS_KLUMA : 180- 187: epfrl AvkhAnp-V cimta BGLS_RUMAL : 14- 22: yleka AevnAegaV llvnn BGLS_RUMAL : 715- 723: knnfa AmvrAqndV ymvca BGLS_SCHCO : 36- 44: dtara AqiaAaadV aivfi BGLS_SCHCO : 41- 47: aqiaa AadvAi--V fissd BGLX_ECOLI : 246- 253: kagld AgsgAvm-V alnsl BGLX_ECOLI : 432- 440: mgsws AagvAdqsV tvltg Y959_HAEIN : 208- 214: qnkld AimpAh--V iysqc YZBA_BACSU : 346- 352: agvdi AlmpAs--V tslke T 20: 11.5102 21( 13) D-x(1,3)-A-x(3)-A Occurences: 21(13) BGL1_SACFI : 409- 415: ndfte Dt--AlkvA eesiv BGL2_SACFI : 413- 419: ndfte Dt--AlkvA eesiv BGL3_ASPWE : 12- 18: gfvms Dw--AahhA gvsga BGLB_CLOTM : 405- 411: aasss Dv--AvvfA glpde BGLS_AGRTU : 118- 124: ecyse Dp--AltaA cavay BGLS_AGRTU : 425- 433: dlpsg DldlAdfsA rmtat BGLS_AGRTU : 427- 433: psgdl Dl--AdfsA rmtat BGLS_AGRTU : 430- 437: dldla Dfs-ArmtA tfvpq BGLS_BUTFI : 132- 139: palpe Dil-AdaaA yadta BGLS_BUTFI : 665- 673: eyyse DpflAgkqA aamvr BGLS_BUTFI : 705- 712: nrkgs Dsr-AserA ireiy BGLS_HANAN : 511- 517: salya Da--AievA nsvag BGLS_KLUMA : 407- 415: aakpa DaenAgliA kfysn BGLS_RUMAL : 632- 639: nrhfi Dsv-AserA lreiy BGLS_SCHCO : 31- 39: slsds DtarAaqiA aaadv BGLS_SCHCO : 75- 82: llawh Dgd-AlvqA vadan BGLX_ECOLI : 302- 310: hgtaa DpedAvrvA lksgi BGLX_ECOLI : 493- 499: pqemi De--AvqtA kqsdv BGLX_ECOLI : 533- 540: pqsqr Dli-AalkA tgkpl Y959_HAEIN : 138- 146: rsfss DvksAvnlA tafid YZBA_BACSU : 344- 350: vkagv Di--AlmpA svtsl Number of patterns evaluated by Pratt:933 Total running time: 2 seconds