------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file GERMIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename GERMIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: GER1_HORVU 13 GER2_HORVU 13 GER2_WHEAT 224 GER3_WHEAT 224 GERP_WHEAT 21 GLP1_BRANA 207 GLP1_MESCR 233 GLP1_PHANI 214 GLP1_SINAL 211 OXO1_HORVU 201 OXO2_HORVU 224 SR1A_PHYPO 246 SR1B_PHYPO 248 Pratt run started at Thu Feb 6 19:34:17 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 10.5102 15( 13) L-x(0,2)-Q-x(1,3)-F 2: 8.3401 29( 13) D-F 3: 8.3401 28( 13) P-x(2)-L 4: 8.3401 24( 13) P-x(5)-F 5: 7.8401 25( 13) A-x(0,1)-D 6: 7.8401 32( 13) F-x(1,2)-A 7: 7.8401 18( 13) Q-x(1,2)-F 8: 7.8401 19( 13) Q-x(0,1)-F 9: 7.8401 15( 13) P-x(1,2)-Q 10: 7.8401 18( 13) P-x(0,1)-Q 11: 7.8401 18( 13) D-x(1,2)-P 12: 7.3401 49( 13) P-x(0,2)-L 13: 7.3401 44( 13) P-x(1,3)-P 14: 7.3401 40( 13) P-x(0,2)-P 15: 7.3401 27( 13) D-x(0,2)-P Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 20.1373 16( 13) P-[DQRS]-[GP]-[AL]-x-[DH]-F B 2: 15.8509 16( 13) P-[DQRS]-x-L-x-[DHR]-[FIL] C 3: 13.6733 13( 13) P-x(0,1)-Q-[DG]-x(4)-[DEQ] D 4: 11.5173 27( 13) P-x(0,2)-L-[ADNQT]-x-[FILV] E 5: 10.9335 24( 13) D-F-x(2)-[AGS] F 6: 10.5102 15( 13) L-x(0,2)-Q-x(1,3)-F G 7: 9.5467 37( 13) P-x(1,3)-P-x(2)-[ADTV] H 8: 9.5230 20( 13) D-x(0,2)-P-x(4)-[DNPT] I 9: 9.2245 28( 13) P-x(0,2)-P-x-[NPQST] J 10: 9.0818 25( 13) F-x(1,2)-A-[ACDGNSTV] K 11: 7.8401 25( 13) A-x(0,1)-D L 12: 7.8401 18( 13) Q-x(1,2)-F M 13: 7.8401 19( 13) Q-x(0,1)-F N 14: 7.8401 15( 13) P-x(1,2)-Q O 15: 7.8401 18( 13) D-x(1,2)-P Best patterns with alignements: fitness hits(seqs) Pattern A 1: 20.1373 16( 13) P-[DQRS]-[GP]-[AL]-x-[DH]-F Occurences: 16(13) GER1_HORVU : 3- 9: yd PSPLqDF cvad GER2_HORVU : 3- 9: yd PSPLqDF ciad GER2_WHEAT : 26- 32: vlatd PDPLqDF cvadl GER2_WHEAT : 155- 161: etfli PRGLmHF qfnvg GER3_WHEAT : 155- 161: etfli PRGLmHF qfnvg GERP_WHEAT : 3- 9: ad PDPLqDF xvadl GLP1_BRANA : 140- 146: qvmvf PQGLlHF qinag GLP1_MESCR : 157- 163: dvfvf PQGLiHF qlnig GLP1_PHANI : 147- 153: dvmvf PQGLlDF qeitg GLP1_SINAL : 144- 150: dsmvf PQGLlHF qlnsg OXO1_HORVU : 3- 9: sd PDPLqDF cvadl OXO1_HORVU : 132- 138: etfvi PRGLmHF qfnvg OXO2_HORVU : 26- 32: vlasd PDPLqDF cvadl OXO2_HORVU : 155- 161: etfli PRGLmHF qfnvg SR1A_PHYPO : 165- 171: matvf PQGAiHF einmn SR1B_PHYPO : 152- 158: matvf PQGAiHF einle B 2: 15.8509 16( 13) P-[DQRS]-x-L-x-[DHR]-[FIL] Occurences: 16(13) GER1_HORVU : 3- 9: yd PSpLqDF cvad GER2_HORVU : 3- 9: yd PSpLqDF ciad GER2_WHEAT : 26- 32: vlatd PDpLqDF cvadl GER2_WHEAT : 155- 161: etfli PRgLmHF qfnvg GER3_WHEAT : 155- 161: etfli PRgLmHF qfnvg GERP_WHEAT : 3- 9: ad PDpLqDF xvadl GLP1_BRANA : 140- 146: qvmvf PQgLlHF qinag GLP1_MESCR : 157- 163: dvfvf PQgLiHF qlnig GLP1_PHANI : 147- 153: dvmvf PQgLlDF qeitg GLP1_SINAL : 144- 150: dsmvf PQgLlHF qlnsg OXO1_HORVU : 3- 9: sd PDpLqDF cvadl OXO1_HORVU : 132- 138: etfvi PRgLmHF qfnvg OXO2_HORVU : 26- 32: vlasd PDpLqDF cvadl OXO2_HORVU : 155- 161: etfli PRgLmHF qfnvg SR1A_PHYPO : 58- 64: qllna PSeLdRI kllkd SR1B_PHYPO : 45- 51: qllna PSeLdRL kllkd C 3: 13.6733 13( 13) P-x(0,1)-Q-[DG]-x(4)-[DEQ] Occurences: 13(13) GER1_HORVU : 5- 13: ydps PlQDfcvaD GER2_HORVU : 5- 13: ydps PlQDfciaD GER2_WHEAT : 28- 36: atdpd PlQDfcvaD ldgka GER3_WHEAT : 28- 36: ssnph PlQDfcvaD ldgka GERP_WHEAT : 5- 13: adpd PlQDfxvaD lxdna GLP1_BRANA : 140- 147: qvmvf P-QGllhfQ inagk GLP1_MESCR : 157- 164: dvfvf P-QGlihfQ lnign GLP1_PHANI : 147- 154: dvmvf P-QGlldfQ eitgk GLP1_SINAL : 144- 151: dsmvf P-QGllhfQ lnsgk OXO1_HORVU : 5- 13: sdpd PlQDfcvaD ldgka OXO2_HORVU : 28- 36: asdpd PlQDfcvaD ldgka SR1A_PHYPO : 165- 172: matvf P-QGaihfE inmnc SR1B_PHYPO : 152- 159: matvf P-QGaihfE inlec D 4: 11.5173 27( 13) P-x(0,2)-L-[ADNQT]-x-[FILV] Occurences: 27(13) GER1_HORVU : 3- 9: yd PspLQdF cvad GER1_HORVU : 5- 9: ydps P--LQdF cvad GER2_HORVU : 3- 9: yd PspLQdF ciad GER2_HORVU : 5- 9: ydps P--LQdF ciad GER2_WHEAT : 26- 32: vlatd PdpLQdF cvadl GER2_WHEAT : 28- 32: atdpd P--LQdF cvadl GER2_WHEAT : 187- 191: givfv P--LTlF gsnpp GER3_WHEAT : 26- 32: vlssn PhpLQdF cvadl GER3_WHEAT : 28- 32: ssnph P--LQdF cvadl GER3_WHEAT : 187- 191: svvfv P--LTlF gsnpp GERP_WHEAT : 3- 9: ad PdpLQdF xvadl GERP_WHEAT : 5- 9: adpd P--LQdF xvadl GLP1_BRANA : 76- 81: fvaqf Pa-LNgL gista GLP1_BRANA : 166- 171: fssas Pg-LQiL dfalf GLP1_MESCR : 25- 31: ayatd PtqLQdF cvgvn GLP1_MESCR : 88- 93: taanl Pg-LNtL gisva GLP1_PHANI : 172- 177: lrqrn Pg-LQiL efqhc GLP1_SINAL : 158- 163: nsgkg Pa-LAfV afgss GLP1_SINAL : 170- 175: fgsss Pg-LQiL pfalf OXO1_HORVU : 3- 9: sd PdpLQdF cvadl OXO1_HORVU : 5- 9: sdpd P--LQdF cvadl OXO1_HORVU : 164- 168: givfv P--LTlF gsdpp OXO2_HORVU : 26- 32: vlasd PdpLQdF cvadl OXO2_HORVU : 28- 32: asdpd P--LQdF cvadl OXO2_HORVU : 187- 191: givfv P--LTlF gsnpp SR1A_PHYPO : 58- 64: qllna PseLDrI kllkd SR1B_PHYPO : 45- 51: qllna PseLDrL kllkd E 5: 10.9335 24( 13) D-F-x(2)-[AGS] Occurences: 24(13) GER1_HORVU : 8- 12: psplq DFcvA d GER2_HORVU : 8- 12: psplq DFciA d GER2_WHEAT : 31- 35: pdplq DFcvA dldgk GER2_WHEAT : 58- 62: seagd DFlfS sklak GER2_WHEAT : 101- 105: smnrv DFapG gtnpp GER3_WHEAT : 31- 35: phplq DFcvA dldgk GER3_WHEAT : 58- 62: seagd DFlfS sklak GER3_WHEAT : 101- 105: smnrv DFapG gtnpp GERP_WHEAT : 8- 12: pdplq DFxvA dlxdn GLP1_BRANA : 21- 25: ndsvq DFcvA nlkra GLP1_BRANA : 48- 52: hvkas DFvfS lgtpg GLP1_MESCR : 30- 34: ptqlq DFcvG vnkpn GLP1_PHANI : 26- 30: nasvn DFcvA ngpga GLP1_PHANI : 54- 58: kvtaa DFvyS glakp GLP1_SINAL : 24- 28: fasvq DFcvA dpkgp GLP1_SINAL : 51- 55: qvten DFafS glgka OXO1_HORVU : 8- 12: pdplq DFcvA dldgk OXO1_HORVU : 35- 39: seagd DFlfS skltk OXO1_HORVU : 78- 82: smnrv DFapG gtnpp OXO2_HORVU : 31- 35: pdplq DFcvA dldgk OXO2_HORVU : 58- 62: seagd DFlfS sklak OXO2_HORVU : 101- 105: smnrv DFapG gtnpp SR1A_PHYPO : 75- 79: nqfvf DFknS klgvt SR1B_PHYPO : 62- 66: nqfvf DFknS klgvt F 6: 10.5102 15( 13) L-x(0,2)-Q-x(1,3)-F Occurences: 15(13) GER1_HORVU : 6- 9: ydpsp L--Qd--F cvad GER2_HORVU : 6- 9: ydpsp L--Qd--F ciad GER2_WHEAT : 29- 32: tdpdp L--Qd--F cvadl GER3_WHEAT : 29- 32: snphp L--Qd--F cvadl GERP_WHEAT : 6- 9: adpdp L--Qd--F xvadl GLP1_BRANA : 168- 173: saspg L--QildF alfan GLP1_MESCR : 28- 31: tdptq L--Qd--F cvgvn GLP1_MESCR : 198- 203: fgpeh Ls-Qlm-F llrps GLP1_PHANI : 174- 179: qrnpg L--QileF qhcfp GLP1_PHANI : 177- 183: pglqi LefQhc-F ptifp GLP1_SINAL : 172- 177: ssspg L--QilpF alfan OXO1_HORVU : 6- 9: sdpdp L--Qd--F cvadl OXO2_HORVU : 29- 32: sdpdp L--Qd--F cvadl SR1A_PHYPO : 145- 151: eagff LenQak-F ightl SR1B_PHYPO : 132- 138: qagff LenQat-F ighil G 7: 9.5467 37( 13) P-x(1,3)-P-x(2)-[ADTV] Occurences: 37(13) GER1_HORVU : 3- 8: yd Ps--PlqD fcvad GER2_HORVU : 3- 8: yd Ps--PlqD fciad GER2_WHEAT : 26- 31: vlatd Pd--PlqD fcvad GER2_WHEAT : 110- 117: ggtnp PhihPraT eigiv GER2_WHEAT : 195- 201: lfgsn Ppi-PtpV ltkal GER2_WHEAT : 196- 201: fgsnp Pi--PtpV ltkal GER2_WHEAT : 196- 203: fgsnp PiptPvlT kalrv GER2_WHEAT : 198- 203: snppi Pt--PvlT kalrv GER3_WHEAT : 26- 31: vlssn Ph--PlqD fcvad GER3_WHEAT : 110- 117: ggtnp PhihPraT eigiv GER3_WHEAT : 195- 201: lfgsn Ppi-PkpV ltkal GER3_WHEAT : 196- 201: fgsnp Pi--PkpV ltkal GER3_WHEAT : 196- 203: fgsnp PipkPvlT kalrv GER3_WHEAT : 198- 203: snppi Pk--PvlT kalrv GERP_WHEAT : 3- 8: ad Pd--PlqD fxvad GLP1_BRANA : 37- 44: tpagy PcirPihV kasdf GLP1_MESCR : 110- 117: hglnp PhthPraT evfvv GLP1_PHANI : 184- 191: fqhcf PtifPpkT iagtt GLP1_SINAL : 73- 80: kaavt PafaPafA glngl OXO1_HORVU : 3- 8: sd Pd--PlqD fcvad OXO1_HORVU : 87- 94: ggtnp PhihPraT eigmv OXO1_HORVU : 172- 178: lfgsd Ppi-PtpV ltkal OXO1_HORVU : 173- 178: fgsdp Pi--PtpV ltkal OXO1_HORVU : 173- 180: fgsdp PiptPvlT kalrv OXO1_HORVU : 175- 180: sdppi Pt--PvlT kalrv OXO2_HORVU : 26- 31: vlasd Pd--PlqD fcvad OXO2_HORVU : 110- 117: ggtnp PhvhPraT eigiv OXO2_HORVU : 195- 201: lfgsn Ppi-PtpV ltkal OXO2_HORVU : 196- 201: fgsnp Pi--PtpV ltkal OXO2_HORVU : 196- 203: fgsnp PiptPvlT kalrv OXO2_HORVU : 198- 203: snppi Pt--PvlT kalrv SR1A_PHYPO : 24- 30: aatdy Ptn-PptT pptpa SR1A_PHYPO : 28- 35: yptnp PttpPtpA ptstp SR1A_PHYPO : 31- 37: npptt Ppt-PapT stplp SR1A_PHYPO : 32- 37: ppttp Pt--PapT stplp SR1A_PHYPO : 32- 39: ppttp PtpaPtsT plpss SR1A_PHYPO : 34- 39: ttppt Pa--PtsT plpss SR1A_PHYPO : 40- 45: aptst Pl--PssA aspel SR1A_PHYPO : 122- 129: cginl PhthPraT einfi SR1A_PHYPO : 228- 234: lgkhl Pqn-PavA mqacm SR1B_PHYPO : 109- 116: cginl PhthPraT einfi SR1B_PHYPO : 215- 221: lakyl Phn-PaiA mkecm H 8: 9.5230 20( 13) D-x(0,2)-P-x(4)-[DNPT] Occurences: 20(13) GER1_HORVU : 2- 8: y D--PsplqD fcvad GER2_HORVU : 2- 8: y D--PsplqD fciad GER2_WHEAT : 25- 31: avlat D--PdplqD fcvad GER2_WHEAT : 101- 109: smnrv DfaPggtnP phihp GER3_WHEAT : 101- 109: smnrv DfaPggtnP phihp GERP_WHEAT : 2- 8: a D--PdplqD fxvad GLP1_BRANA : 89- 97: starl DlaPkgviP mhthp GLP1_MESCR : 24- 30: qayat D--PtqlqD fcvgv GLP1_MESCR : 51- 57: glfck D--PmevnP ddflf GLP1_MESCR : 101- 109: svarl DfaPhglnP phthp GLP1_PHANI : 96- 104: tlarl DlaPggviP mhthp GLP1_SINAL : 29- 35: dfcva D--PkgpqN psgys OXO1_HORVU : 2- 8: s D--PdplqD fcvad OXO1_HORVU : 78- 86: smnrv DfaPggtnP phihp OXO1_HORVU : 171- 177: tlfgs D--PpiptP vltka OXO2_HORVU : 25- 31: avlas D--PdplqD fcvad OXO2_HORVU : 101- 109: smnrv DfaPggtnP phvhp SR1A_PHYPO : 22- 29: seaat Dy-PtnppT tpptp SR1A_PHYPO : 190- 196: afnne D--PgvqtT assff SR1B_PHYPO : 177- 183: afnne D--PgvqtT assff I 9: 9.2245 28( 13) P-x(0,2)-P-x-[NPQST] Occurences: 28(13) GER1_HORVU : 3- 7: yd Ps-PlQ dfcva GER2_HORVU : 3- 7: yd Ps-PlQ dfcia GER2_WHEAT : 26- 30: vlatd Pd-PlQ dfcva GER2_WHEAT : 195- 198: lfgsn P--PiP tpvlt GER2_WHEAT : 195- 200: lfgsn PpiPtP vltka GER2_WHEAT : 196- 200: fgsnp Pi-PtP vltka GER3_WHEAT : 26- 30: vlssn Ph-PlQ dfcva GER3_WHEAT : 195- 198: lfgsn P--PiP kpvlt GER3_WHEAT : 195- 200: lfgsn PpiPkP vltka GER3_WHEAT : 196- 200: fgsnp Pi-PkP vltka GERP_WHEAT : 3- 7: ad Pd-PlQ dfxva GLP1_BRANA : 192- 195: attfl P--PaT vktlk GLP1_MESCR : 109- 112: phgln P--PhT hprat GLP1_PHANI : 188- 191: fptif P--PkT iagtt GLP1_SINAL : 30- 35: fcvad PkgPqN psgys OXO1_HORVU : 3- 7: sd Pd-PlQ dfcva OXO1_HORVU : 172- 175: lfgsd P--PiP tpvlt OXO1_HORVU : 172- 177: lfgsd PpiPtP vltka OXO1_HORVU : 173- 177: fgsdp Pi-PtP vltka OXO2_HORVU : 26- 30: vlasd Pd-PlQ dfcva OXO2_HORVU : 48- 53: svngh PckPmS eagdd OXO2_HORVU : 195- 198: lfgsn P--PiP tpvlt OXO2_HORVU : 195- 200: lfgsn PpiPtP vltka OXO2_HORVU : 196- 200: fgsnp Pi-PtP vltka SR1A_PHYPO : 24- 29: aatdy PtnPpT tpptp SR1A_PHYPO : 27- 30: dyptn P--PtT pptpa SR1A_PHYPO : 28- 33: yptnp PttPpT papts SR1A_PHYPO : 31- 34: npptt P--PtP aptst SR1A_PHYPO : 31- 36: npptt PptPaP tstpl SR1A_PHYPO : 32- 36: ppttp Pt-PaP tstpl SR1A_PHYPO : 34- 38: ttppt Pa-PtS tplps SR1A_PHYPO : 40- 44: aptst Pl-PsS aaspe SR1B_PHYPO : 28- 31: qapts P--PdS sasae J 10: 9.0818 25( 13) F-x(1,2)-A-[ACDGNSTV] Occurences: 25(13) GER1_HORVU : 9- 13: splqd FcvAD GER2_HORVU : 9- 13: splqd FciAD GER2_WHEAT : 32- 36: dplqd FcvAD ldgka GER2_WHEAT : 220- 223: llksk Fa-AG f GER3_WHEAT : 32- 36: hplqd FcvAD ldgka GERP_WHEAT : 9- 13: dplqd FxvAD lxdna GLP1_BRANA : 22- 26: dsvqd FcvAN lkrae GLP1_BRANA : 161- 165: aalvt FssAS pglqi GLP1_MESCR : 77- 80: dnalg Fa-AT lvtaa GLP1_PHANI : 18- 21: lafpv Ft-AN asvnd GLP1_PHANI : 27- 31: asvnd FcvAN gpgar GLP1_SINAL : 25- 29: asvqd FcvAD pkgpq OXO1_HORVU : 9- 13: dplqd FcvAD ldgka OXO2_HORVU : 32- 36: dplqd FcvAD ldgka OXO2_HORVU : 220- 223: llksk Fa-AG f SR1A_PHYPO : 13- 16: alfvl Fl-AA seaat SR1A_PHYPO : 13- 17: alfvl FlaAS eaatd SR1A_PHYPO : 99- 102: tsrtn Fp-AV ighnv SR1A_PHYPO : 113- 117: amtvg FieAC ginlp SR1A_PHYPO : 133- 136: atein Fi-AS gkfea SR1A_PHYPO : 139- 142: iasgk Fe-AG fflen SR1A_PHYPO : 182- 185: cepam Fv-AA fnned SR1B_PHYPO : 86- 89: tsrtd Fp-AV ighni SR1B_PHYPO : 100- 104: amtvg FieAC ginlp SR1B_PHYPO : 126- 129: iakgr Fq-AG fflen SR1B_PHYPO : 169- 172: cepam Fv-AA fnned K 11: 7.8401 25( 13) A-x(0,1)-D Occurences: 25(13) GER1_HORVU : 12- 13: qdfcv A-D GER2_HORVU : 12- 13: qdfci A-D GER2_WHEAT : 23- 25: apavl AtD pdplq GER2_WHEAT : 35- 36: qdfcv A-D ldgka GER2_WHEAT : 55- 57: kpmse AgD dflfs GER3_WHEAT : 35- 36: qdfcv A-D ldgka GER3_WHEAT : 55- 57: kpmse AgD dflfs GERP_WHEAT : 1- 2: A-D pdplq GERP_WHEAT : 12- 13: qdfxv A-D lxdna GLP1_BRANA : 46- 48: pihvk AsD fvfsl GLP1_MESCR : 22- 24: lyqay AtD ptqlq GLP1_MESCR : 137- 138: vtsnl A-D ggnkl GLP1_PHANI : 35- 37: angpg ArD tpsgf GLP1_PHANI : 52- 54: takvt AaD fvysg GLP1_PHANI : 53- 54: akvta A-D fvysg GLP1_SINAL : 28- 29: qdfcv A-D pkgpq GLP1_SINAL : 181- 183: pfalf AnD lpsel OXO1_HORVU : 12- 13: qdfcv A-D ldgka OXO1_HORVU : 32- 34: kpmse AgD dflfs OXO2_HORVU : 23- 25: apavl AsD pdplq OXO2_HORVU : 35- 36: qdfcv A-D ldgka OXO2_HORVU : 55- 57: kpmse AgD dflfs SR1A_PHYPO : 20- 22: aasea AtD yptnp SR1A_PHYPO : 205- 206: ffglp A-D vvgvs SR1B_PHYPO : 192- 193: ffglp A-D vaavs L 12: 7.8401 18( 13) Q-x(1,2)-F Occurences: 18(13) GER1_HORVU : 7- 9: dpspl Qd-F cvad GER2_HORVU : 7- 9: dpspl Qd-F ciad GER2_WHEAT : 30- 32: dpdpl Qd-F cvadl GER3_WHEAT : 30- 32: nphpl Qd-F cvadl GERP_WHEAT : 7- 9: dpdpl Qd-F xvadl GLP1_BRANA : 20- 22: sndsv Qd-F cvanl GLP1_MESCR : 29- 31: dptql Qd-F cvgvn GLP1_MESCR : 200- 203: pehls QlmF llrps GLP1_PHANI : 180- 183: qilef QhcF ptifp GLP1_SINAL : 6- 8: mkmri Qi-F filsl GLP1_SINAL : 6- 9: mkmri QifF ilslf GLP1_SINAL : 23- 25: sfasv Qd-F cvadp OXO1_HORVU : 7- 9: dpdpl Qd-F cvadl OXO2_HORVU : 30- 32: dpdpl Qd-F cvadl SR1A_PHYPO : 71- 74: llkdn QfvF dfkns SR1A_PHYPO : 148- 151: fflen QakF ightl SR1B_PHYPO : 58- 61: llkdn QfvF dfkns SR1B_PHYPO : 127- 130: akgrf QagF flenq SR1B_PHYPO : 135- 138: fflen QatF ighil M 13: 7.8401 19( 13) Q-x(0,1)-F Occurences: 19(13) GER1_HORVU : 7- 9: dpspl QdF cvad GER2_HORVU : 7- 9: dpspl QdF ciad GER2_WHEAT : 30- 32: dpdpl QdF cvadl GER2_WHEAT : 162- 163: glmhf Q-F nvgkt GER3_WHEAT : 30- 32: nphpl QdF cvadl GER3_WHEAT : 162- 163: glmhf Q-F nvgkt GERP_WHEAT : 7- 9: dpdpl QdF xvadl GLP1_BRANA : 20- 22: sndsv QdF cvanl GLP1_BRANA : 74- 75: pgfva Q-F palng GLP1_MESCR : 29- 31: dptql QdF cvgvn GLP1_PHANI : 81- 82: pafvg Q-F pgvig GLP1_SINAL : 6- 8: mkmri QiF filsl GLP1_SINAL : 23- 25: sfasv QdF cvadp OXO1_HORVU : 7- 9: dpdpl QdF cvadl OXO1_HORVU : 139- 140: glmhf Q-F nvgkt OXO2_HORVU : 30- 32: dpdpl QdF cvadl OXO2_HORVU : 162- 163: glmhf Q-F nvgkt SR1A_PHYPO : 71- 72: llkdn Q-F vfdfk SR1B_PHYPO : 58- 59: llkdn Q-F vfdfk N 14: 7.8401 15( 13) P-x(1,2)-Q Occurences: 15(13) GER1_HORVU : 5- 7: ydps Pl-Q dfcva GER2_HORVU : 5- 7: ydps Pl-Q dfcia GER2_WHEAT : 28- 30: atdpd Pl-Q dfcva GER3_WHEAT : 28- 30: ssnph Pl-Q dfcva GERP_WHEAT : 5- 7: adpd Pl-Q dfxva GLP1_BRANA : 133- 135: vqtlk Pg-Q vmvfp GLP1_BRANA : 166- 169: fssas PglQ ildfa GLP1_MESCR : 25- 27: ayatd Pt-Q lqdfc GLP1_PHANI : 172- 175: lrqrn PglQ ilefq GLP1_SINAL : 44- 46: ysckn Pd-Q vtend GLP1_SINAL : 170- 173: fgsss PglQ ilpfa OXO1_HORVU : 5- 7: sdpd Pl-Q dfcva OXO2_HORVU : 28- 30: asdpd Pl-Q dfcva SR1A_PHYPO : 191- 194: fnned PgvQ ttass SR1B_PHYPO : 178- 181: fnned PgvQ ttass O 15: 7.8401 18( 13) D-x(1,2)-P Occurences: 18(13) GER1_HORVU : 2- 5: y DpsP lqdfc GER2_HORVU : 2- 5: y DpsP lqdfc GER2_WHEAT : 25- 28: avlat DpdP lqdfc GER2_WHEAT : 101- 104: smnrv DfaP ggtnp GER3_WHEAT : 101- 104: smnrv DfaP ggtnp GERP_WHEAT : 2- 5: a DpdP lqdfx GLP1_BRANA : 89- 92: starl DlaP kgvip GLP1_MESCR : 101- 104: svarl DfaP hglnp GLP1_PHANI : 37- 39: gpgar Dt-P sgfvc GLP1_PHANI : 96- 99: tlarl DlaP ggvip GLP1_SINAL : 183- 185: alfan Dl-P selve OXO1_HORVU : 2- 5: s DpdP lqdfc OXO1_HORVU : 78- 81: smnrv DfaP ggtnp OXO1_HORVU : 171- 173: tlfgs Dp-P iptpv OXO2_HORVU : 25- 28: avlas DpdP lqdfc OXO2_HORVU : 101- 104: smnrv DfaP ggtnp SR1A_PHYPO : 22- 24: seaat Dy-P tnppt SR1B_PHYPO : 85- 87: atsrt Df-P avigh Number of patterns evaluated by Pratt:41 Total running time: 1 seconds