------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 13 sequences from file GAS_VESICLE_A_1 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 13 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename GAS_VESICLE_A_1.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: GVP1_HALHA 75 GVP2_HALHA 78 GVPA_APHFL 70 GVPA_FREDI 70 GVPA_HALME 78 GVPA_MICBC 70 GVPA_PSEAN 71 GVPJ_HALHA 114 GVPJ_HALME 114 GVPJ_HALSA 98 GVPM_HALHA 84 GVPM_HALME 86 GVPM_HALSA 73 Pratt run started at Thu Feb 6 19:32:17 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 20.3503 22( 13) L-x(4,5)-R-x(3)-A-x(3)-T-x(3)-Y 2: 19.8503 13( 13) E-x(5)-L-x(0,1)-D-x(0,1)-G-x-V 3: 16.6802 13( 13) R-x(3)-A-x(3)-T-x(3)-Y 4: 15.6802 16( 13) L-x(0,1)-D-x(0,1)-G-x-V 5: 15.6802 13( 13) L-x(2)-G-x-V-x(1,3)-D 6: 15.1802 13( 13) L-x-G-x(2,3)-L-x(1,3)-A 7: 15.1802 13( 13) D-x(0,1)-G-x-V-x(1,3)-D 8: 15.1802 19( 13) V-x(1,3)-D-x(2)-L-x(1,2)-G 9: 15.1802 13( 13) A-x(0,2)-E-x(5)-L-x(0,1)-D 10: 15.1802 13( 13) A-x(0,1)-V-x(1,3)-D-x(2)-L 11: 15.1802 13( 13) A-x(3,5)-D-x(2)-L-x(1,2)-G 12: 12.5102 13( 13) A-x(3)-T-x(3)-Y 13: 12.0102 17( 13) L-x(5)-V-x(1,2)-A 14: 12.0102 13( 13) A-x(0,1)-A-x(3)-T 15: 12.0102 14( 13) L-x(2,3)-A-x-A 16: 12.0102 13( 13) L-x-A-x(2,3)-A 17: 12.0102 15( 13) D-x(2)-L-x(1,2)-G 18: 11.5102 24( 13) L-x(3,4)-A-x(3,4)-A 19: 11.5102 13( 13) L-x(2)-A-x(1,3)-A 20: 11.5102 15( 13) A-x(1,3)-I-A Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 116.0260 13( 13) E-x-[ILV]-[DE]-x-[ILV]-L-x(0,1)-D-x(0,1)-G-[AIV]-V-[IV]-[DNQ]-[AV]-x-[AIV]-x-[IV]-[ST]-[ILV]-[AGV]-[DG]-x-[EP]-[IL]-[IL]-[AGST]-[IV]-[ES]-[AL]-R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] B 2: 103.3617 16( 13) L-x(0,1)-D-x(0,1)-G-[AIV]-V-[IV]-[DNQ]-[AV]-x-[AIV]-x-[IV]-[ST]-[ILV]-[AGV]-[DG]-x-[EP]-[IL]-[IL]-[AGST]-[IV]-[ES]-[AL]-R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] C 3: 72.6241 13( 13) L-[DR]-[DK]-G-[AIV]-V-x(1,3)-D-[AIV]-x-[AV]-x-[IV]-[AGS]-x(3)-[IL]-x-[GIL]-[ILV]-[AEST]-[ILV]-[ER]-A-x-[IV]-[AV]-x(2)-[EST]-[TV]-x-[AT] D 4: 70.3076 13( 13) A-x(0,1)-V-x(1,3)-D-x(2)-L-x(2)-[GIV]-x-[LV]-x-[ADQ]-[AV]-x-[AV]-x-[FIV]-[EST]-x-[AV]-[ADG]-x(2)-[GIL]-[IL]-[ADEGST]-[FIV]-[EPS]-x(3)-[ADV]-x-[AE]-x-[MV]-[DET]-[AEST]-x(4)-[ADGS] E 5: 65.7299 13( 13) D-x(0,1)-G-[AIV]-V-x(1,3)-D-[AIV]-x-[AV]-x-[IV]-[AGS]-x(3)-[IL]-x-[GIL]-[ILV]-[AEST]-[ILV]-[ER]-A-x-[IV]-[AV]-x(2)-[EST]-[TV]-x-[AT] F 6: 59.3213 15( 13) V-x(1,3)-D-x(2)-L-x(1,2)-G-[AIV]-x-[ILV]-[DQR]-[AV]-x-[AIV]-x(4)-[ATV]-[ADG]-[AIV]-[EPQ]-x-[GIL]-x(3)-[ALP]-x-[AGIV]-[ATV]-x(2)-[EGS]-x(2)-[ET]-x(4)-[AGIV]-x(3)-[ADEGNQ] G 7: 57.6463 13( 13) A-x(3,5)-D-x(2)-L-x(1,2)-G-[AIV]-x-[ILV]-[DQR]-[AV]-x-[AIV]-x(4)-[ATV]-[ADG]-[AIV]-[EPQ]-x-[GIL]-x(3)-[ALP]-x-[AGIV]-[ATV]-x(2)-[EGS]-x(2)-[ET]-x(4)-[AGIV] H 8: 56.1512 13( 13) D-x(2)-L-x(1,2)-G-[AIV]-x-[ILV]-[DQR]-[AV]-x-[AIV]-x(4)-[ATV]-[ADG]-[AIV]-[EPQ]-x-[GIL]-x(3)-[ALP]-x-[AGIV]-[ATV]-x(2)-[EGS]-x(2)-[ET]-x(4)-[AGIV]-x(3)-[ADEGNQ] I 9: 55.7608 13( 13) A-x(0,2)-E-x-[ILV]-[DE]-x-[ILV]-L-x(0,1)-D-x-[AG]-[IV]-[IV]-x-[ADN]-[ADV]-x-[AIV]-x(2)-[SV]-[AILV]-[DGV]-x(3)-[IL]-[GL] J 10: 40.5996 22( 13) L-x(4,5)-R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] K 11: 36.9295 13( 13) R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] L 12: 32.6621 13( 13) L-[ILV]-G-x(2,3)-L-x(1,3)-A-x-[AIV]-[AV]-x(2)-[EST]-[TV]-x-[AT] M 13: 24.2427 13( 13) A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] N 14: 24.1745 13( 13) E-x-[ILV]-[DE]-x-[ILV]-L-x(0,1)-D-x(0,1)-G O 15: 17.4058 13( 13) L-[HKR]-x-A-x(1,3)-A-x(3)-[QT] P 16: 16.7614 15( 13) A-x(1,3)-I-A-x(3)-[GQT]-x(4)-[AGL] Q 17: 16.7477 21( 13) L-x(3,4)-A-x(3,4)-A-[ADS]-x(2)-[GTV] R 18: 15.1803 14( 13) L-x(3)-[AG]-x-V-x(1,2)-A S 19: 14.6088 13( 13) A-x(0,1)-A-[GSV]-x(2)-T T 20: 14.2396 14( 13) L-x(2,3)-A-x-A-x(3)-[ANPT] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 116.0260 13( 13) E-x-[ILV]-[DE]-x-[ILV]-L-x(0,1)-D-x(0,1)-G-[AIV]-V-[IV]-[DNQ]-[AV]-x-[AIV]-x-[IV]-[ST]-[ILV]-[AGV]-[DG]-x-[EP]-[IL]-[IL]-[AGST]-[IV]-[ES]-[AL]-R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] Occurences: 13(13) GVP1_HALHA : 10- 54: ssgla EvLDrVL-DkGVVVDVwArVSLVGiEILTVEARVVAASVDTflhYA eeiak GVP2_HALHA : 10- 54: sssla EvLDrVL-DkGVVVDVwArISLVGiEILTVEARVVAASVDTflhYA eeiak GVPA_APHFL : 13- 57: sssla EvIDrIL-DkGIVIDAwVrVSLVGiELLAIEARIVIASVETylkYA eavgl GVPA_FREDI : 13- 57: sssla EvIDrIL-DkGIVVDAwVrVSLVGiELLAIEARIVIASVETylkYA eavgl GVPA_HALME : 11- 55: sssla EvLDrVL-DkGVVVDVwArISLVGiEILTVEARVVAASVDTflhYA eeiak GVPA_MICBC : 13- 57: sssla EvIDrIL-DkGIVIDAwArVSLVGiELLAIEARVVIASVETylkYA eavgl GVPA_PSEAN : 13- 57: sssla EvIDrIL-DkGIVIDAwVrVSLVGiELLSIEARVVIASVETylkYA eavgl GVPJ_HALHA : 15- 59: qgdla EmLEmLL-DkGVVVNAdIaVSVGDtELLGIELRAAIASFETaaeYG lefpt GVPJ_HALME : 15- 59: qgdla EmLEmLL-DkGVVINAdIaVSIGDtELLGIELRAAVASFETaaqYG lefpt GVPJ_HALSA : 15- 59: qgdla EtLElLL-DkGVVVNAdIaVSVGDtELLGVELRAAIASFETaaeYG ldfpt GVPM_HALHA : 13- 57: thaiv EfVDvLLrD-GAVIQAdViVTVADiPLIGISLRAAIAGMTTmteYG lfeew GVPM_HALME : 13- 57: thaiv EfVDvLLrD-GAVIQAdViVTVADiPLLGISLRAAIAGMTTmtaYG mfenw GVPM_HALSA : 13- 57: shaiv EfVDvLLrD-GAVIQAdAiVTVAGvPLLGISLRAAIAGMTTmteYG ifdgw B 2: 103.3617 16( 13) L-x(0,1)-D-x(0,1)-G-[AIV]-V-[IV]-[DNQ]-[AV]-x-[AIV]-x-[IV]-[ST]-[ILV]-[AGV]-[DG]-x-[EP]-[IL]-[IL]-[AGST]-[IV]-[ES]-[AL]-R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] Occurences: 16(13) GVP1_HALHA : 16- 54: vldrv L-DkGVVVDVwArVSLVGiEILTVEARVVAASVDTflhYA eeiak GVP2_HALHA : 16- 54: vldrv L-DkGVVVDVwArISLVGiEILTVEARVVAASVDTflhYA eeiak GVPA_APHFL : 19- 57: vidri L-DkGIVIDAwVrVSLVGiELLAIEARIVIASVETylkYA eavgl GVPA_FREDI : 19- 57: vidri L-DkGIVVDAwVrVSLVGiELLAIEARIVIASVETylkYA eavgl GVPA_HALME : 17- 55: vldrv L-DkGVVVDVwArISLVGiEILTVEARVVAASVDTflhYA eeiak GVPA_MICBC : 19- 57: vidri L-DkGIVIDAwArVSLVGiELLAIEARVVIASVETylkYA eavgl GVPA_PSEAN : 19- 57: vidri L-DkGIVIDAwVrVSLVGiELLSIEARVVIASVETylkYA eavgl GVPJ_HALHA : 20- 59: emlem LlDkGVVVNAdIaVSVGDtELLGIELRAAIASFETaaeYG lefpt GVPJ_HALHA : 21- 59: mleml L-DkGVVVNAdIaVSVGDtELLGIELRAAIASFETaaeYG lefpt GVPJ_HALME : 20- 59: emlem LlDkGVVINAdIaVSIGDtELLGIELRAAVASFETaaqYG lefpt GVPJ_HALME : 21- 59: mleml L-DkGVVINAdIaVSIGDtELLGIELRAAVASFETaaqYG lefpt GVPJ_HALSA : 20- 59: etlel LlDkGVVVNAdIaVSVGDtELLGVELRAAIASFETaaeYG ldfpt GVPJ_HALSA : 21- 59: tlell L-DkGVVVNAdIaVSVGDtELLGVELRAAIASFETaaeYG ldfpt GVPM_HALHA : 19- 57: fvdvl LrD-GAVIQAdViVTVADiPLIGISLRAAIAGMTTmteYG lfeew GVPM_HALME : 19- 57: fvdvl LrD-GAVIQAdViVTVADiPLLGISLRAAIAGMTTmtaYG mfenw GVPM_HALSA : 19- 57: fvdvl LrD-GAVIQAdAiVTVAGvPLLGISLRAAIAGMTTmteYG ifdgw C 3: 72.6241 13( 13) L-[DR]-[DK]-G-[AIV]-V-x(1,3)-D-[AIV]-x-[AV]-x-[IV]-[AGS]-x(3)-[IL]-x-[GIL]-[ILV]-[AEST]-[ILV]-[ER]-A-x-[IV]-[AV]-x(2)-[EST]-[TV]-x-[AT] Occurences: 13(13) GVP1_HALHA : 16- 49: vldrv LDKGVVv--DVwArVSlvgIeILTVEArVVaaSVdT flhya GVP2_HALHA : 16- 49: vldrv LDKGVVv--DVwArISlvgIeILTVEArVVaaSVdT flhya GVPA_APHFL : 19- 52: vidri LDKGIVi--DAwVrVSlvgIeLLAIEArIViaSVeT ylkya GVPA_FREDI : 19- 52: vidri LDKGIVv--DAwVrVSlvgIeLLAIEArIViaSVeT ylkya GVPA_HALME : 17- 50: vldrv LDKGVVv--DVwArISlvgIeILTVEArVVaaSVdT flhya GVPA_MICBC : 19- 52: vidri LDKGIVi--DAwArVSlvgIeLLAIEArVViaSVeT ylkya GVPA_PSEAN : 19- 52: vidri LDKGIVi--DAwVrVSlvgIeLLSIEArVViaSVeT ylkya GVPJ_HALHA : 21- 56: mleml LDKGVVvnaDIaVsVGdteLlGIELRAaIAsfETaA eygle GVPJ_HALME : 21- 56: mleml LDKGVVinaDIaVsIGdteLlGIELRAaVAsfETaA qygle GVPJ_HALSA : 21- 56: tlell LDKGVVvnaDIaVsVGdteLlGVELRAaIAsfETaA eygld GVPM_HALHA : 19- 54: fvdvl LRDGAViqaDViVtVAdipLiGISLRAaIAgmTTmT eyglf GVPM_HALME : 19- 54: fvdvl LRDGAViqaDViVtVAdipLlGISLRAaIAgmTTmT aygmf GVPM_HALSA : 19- 54: fvdvl LRDGAViqaDAiVtVAgvpLlGISLRAaIAgmTTmT eygif D 4: 70.3076 13( 13) A-x(0,1)-V-x(1,3)-D-x(2)-L-x(2)-[GIV]-x-[LV]-x-[ADQ]-[AV]-x-[AV]-x-[FIV]-[EST]-x-[AV]-[ADG]-x(2)-[GIL]-[IL]-[ADEGST]-[FIV]-[EPS]-x(3)-[ADV]-x-[AE]-x-[MV]-[DET]-[AEST]-x(4)-[ADGS] Occurences: 13(13) GVP1_HALHA : 9- 54: dssgl AeVl--DrvLdkGvVvDVwArVSlVGieILTVEarvVaAsVDTflhyA eeiak GVP2_HALHA : 9- 54: dsssl AeVl--DrvLdkGvVvDVwArISlVGieILTVEarvVaAsVDTflhyA eeiak GVPA_APHFL : 12- 57: ssssl AeVi--DriLdkGiViDAwVrVSlVGieLLAIEariViAsVETylkyA eavgl GVPA_FREDI : 12- 57: ssssl AeVi--DriLdkGiVvDAwVrVSlVGieLLAIEariViAsVETylkyA eavgl GVPA_HALME : 10- 55: dsssl AeVl--DrvLdkGvVvDVwArISlVGieILTVEarvVaAsVDTflhyA eeiak GVPA_MICBC : 12- 57: ssssl AeVi--DriLdkGiViDAwArVSlVGieLLAIEarvViAsVETylkyA eavgl GVPA_PSEAN : 12- 57: ssssl AeVi--DriLdkGiViDAwVrVSlVGieLLSIEarvViAsVETylkyA eavgl GVPJ_HALHA : 32- 78: vnadi A-VsvgDteLlgIeLrAAiAsFEtAAeyGLEFPtgtDmErVESaaniS pdqsd GVPJ_HALME : 32- 78: inadi A-VsigDteLlgIeLrAAvAsFEtAAqyGLEFPtgtDmErVEEaagiS pdesr GVPJ_HALSA : 32- 78: vnadi A-VsvgDteLlgVeLrAAiAsFEtAAeyGLDFPtgtDmErVTAaagvD addsk GVPM_HALHA : 10- 57: kdeth AiVefvDvlLrdGaViQAdViVTvADipLIGISlraAiAgMTTmteyG lfeew GVPM_HALME : 10- 57: kdeth AiVefvDvlLrdGaViQAdViVTvADipLLGISlraAiAgMTTmtayG mfenw GVPM_HALSA : 10- 57: krnsh AiVefvDvlLrdGaViQAdAiVTvAGvpLLGISlraAiAgMTTmteyG ifdgw E 5: 65.7299 13( 13) D-x(0,1)-G-[AIV]-V-x(1,3)-D-[AIV]-x-[AV]-x-[IV]-[AGS]-x(3)-[IL]-x-[GIL]-[ILV]-[AEST]-[ILV]-[ER]-A-x-[IV]-[AV]-x(2)-[EST]-[TV]-x-[AT] Occurences: 13(13) GVP1_HALHA : 17- 49: ldrvl DkGVVv--DVwArVSlvgIeILTVEArVVaaSVdT flhya GVP2_HALHA : 17- 49: ldrvl DkGVVv--DVwArISlvgIeILTVEArVVaaSVdT flhya GVPA_APHFL : 20- 52: idril DkGIVi--DAwVrVSlvgIeLLAIEArIViaSVeT ylkya GVPA_FREDI : 20- 52: idril DkGIVv--DAwVrVSlvgIeLLAIEArIViaSVeT ylkya GVPA_HALME : 18- 50: ldrvl DkGVVv--DVwArISlvgIeILTVEArVVaaSVdT flhya GVPA_MICBC : 20- 52: idril DkGIVi--DAwArVSlvgIeLLAIEArVViaSVeT ylkya GVPA_PSEAN : 20- 52: idril DkGIVi--DAwVrVSlvgIeLLSIEArVViaSVeT ylkya GVPJ_HALHA : 22- 56: lemll DkGVVvnaDIaVsVGdteLlGIELRAaIAsfETaA eygle GVPJ_HALME : 22- 56: lemll DkGVVinaDIaVsIGdteLlGIELRAaVAsfETaA qygle GVPJ_HALSA : 22- 56: lelll DkGVVvnaDIaVsVGdteLlGVELRAaIAsfETaA eygld GVPM_HALHA : 21- 54: dvllr D-GAViqaDViVtVAdipLiGISLRAaIAgmTTmT eyglf GVPM_HALME : 21- 54: dvllr D-GAViqaDViVtVAdipLlGISLRAaIAgmTTmT aygmf GVPM_HALSA : 21- 54: dvllr D-GAViqaDAiVtVAgvpLlGISLRAaIAgmTTmT eygif F 6: 59.3213 15( 13) V-x(1,3)-D-x(2)-L-x(1,2)-G-[AIV]-x-[ILV]-[DQR]-[AV]-x-[AIV]-x(4)-[ATV]-[ADG]-[AIV]-[EPQ]-x-[GIL]-x(3)-[ALP]-x-[AGIV]-[ATV]-x(2)-[EGS]-x(2)-[ET]-x(4)-[AGIV]-x(3)-[ADEGNQ] Occurences: 15(13) GVP1_HALHA : 11- 58: sglae Vl--DrvLdkGVvVDVwArvslVGIEiLtveArVVaaSvdTflhyAeeiA kieqa GVP2_HALHA : 11- 58: sslae Vl--DrvLdkGVvVDVwArislVGIEiLtveArVVaaSvdTflhyAeeiA kieqa GVPA_APHFL : 14- 61: sslae Vi--DriLdkGIvIDAwVrvslVGIElLaieArIViaSveTylkyAeavG ltqsa GVPA_FREDI : 14- 61: sslae Vi--DriLdkGIvVDAwVrvslVGIElLaieArIViaSveTylkyAeavG ltqsa GVPA_HALME : 12- 59: sslae Vl--DrvLdkGVvVDVwArislVGIEiLtveArVVaaSvdTflhyAeeiA kieqa GVPA_MICBC : 14- 61: sslae Vi--DriLdkGIvIDAwArvslVGIElLaieArVViaSveTylkyAeavG ltqxa GVPA_PSEAN : 14- 61: sslae Vi--DriLdkGIvIDAwVrvslVGIElLsieArVViaSveTylkyAeavG ltasa GVPJ_HALHA : 33- 81: nadia VsvgDteLl-GIeLRAaIasfeTAAEyGlefPtGTdmErvEsaanIspdQ sdpas GVPJ_HALHA : 35- 81: diavs Vg--DteLl-GIeLRAaIasfeTAAEyGlefPtGTdmErvEsaanIspdQ sdpas GVPJ_HALME : 33- 81: nadia VsigDteLl-GIeLRAaVasfeTAAQyGlefPtGTdmErvEeaagIspdE srsld GVPJ_HALSA : 33- 81: nadia VsvgDteLl-GVeLRAaIasfeTAAEyGldfPtGTdmErvTaaagVdadD sksvl GVPJ_HALSA : 35- 81: diavs Vg--DteLl-GVeLRAaIasfeTAAEyGldfPtGTdmErvTaaagVdadD sksvl GVPM_HALHA : 12- 61: ethai VefvDvlLrdGAvIQAdVivtvADIPlIgisLrAAiaGmtTmteyGlfeE wdaah GVPM_HALME : 12- 61: ethai VefvDvlLrdGAvIQAdVivtvADIPlLgisLrAAiaGmtTmtayGmfeN wdath GVPM_HALSA : 12- 61: nshai VefvDvlLrdGAvIQAdAivtvAGVPlLgisLrAAiaGmtTmteyGifdG wdadh G 7: 57.6463 13( 13) A-x(3,5)-D-x(2)-L-x(1,2)-G-[AIV]-x-[ILV]-[DQR]-[AV]-x-[AIV]-x(4)-[ATV]-[ADG]-[AIV]-[EPQ]-x-[GIL]-x(3)-[ALP]-x-[AGIV]-[ATV]-x(2)-[EGS]-x(2)-[ET]-x(4)-[AGIV] Occurences: 13(13) GVP1_HALHA : 9- 54: dssgl Aevl--DrvLdkGVvVDVwArvslVGIEiLtveArVVaaSvdTflhyA eeiak GVP2_HALHA : 9- 54: dsssl Aevl--DrvLdkGVvVDVwArislVGIEiLtveArVVaaSvdTflhyA eeiak GVPA_APHFL : 12- 57: ssssl Aevi--DriLdkGIvIDAwVrvslVGIElLaieArIViaSveTylkyA eavgl GVPA_FREDI : 12- 57: ssssl Aevi--DriLdkGIvVDAwVrvslVGIElLaieArIViaSveTylkyA eavgl GVPA_HALME : 10- 55: dsssl Aevl--DrvLdkGVvVDVwArislVGIEiLtveArVVaaSvdTflhyA eeiak GVPA_MICBC : 12- 57: ssssl Aevi--DriLdkGIvIDAwArvslVGIElLaieArVViaSveTylkyA eavgl GVPA_PSEAN : 12- 57: ssssl Aevi--DriLdkGIvIDAwVrvslVGIElLsieArVViaSveTylkyA eavgl GVPJ_HALHA : 32- 77: vnadi Avsvg-DteLl-GIeLRAaIasfeTAAEyGlefPtGTdmErvEsaanI spdqs GVPJ_HALME : 32- 77: inadi Avsig-DteLl-GIeLRAaVasfeTAAQyGlefPtGTdmErvEeaagI spdes GVPJ_HALSA : 32- 77: vnadi Avsvg-DteLl-GVeLRAaIasfeTAAEyGldfPtGTdmErvTaaagV dadds GVPM_HALHA : 10- 57: kdeth AivefvDvlLrdGAvIQAdVivtvADIPlIgisLrAAiaGmtTmteyG lfeew GVPM_HALME : 10- 57: kdeth AivefvDvlLrdGAvIQAdVivtvADIPlLgisLrAAiaGmtTmtayG mfenw GVPM_HALSA : 10- 57: krnsh AivefvDvlLrdGAvIQAdAivtvAGVPlLgisLrAAiaGmtTmteyG ifdgw H 8: 56.1512 13( 13) D-x(2)-L-x(1,2)-G-[AIV]-x-[ILV]-[DQR]-[AV]-x-[AIV]-x(4)-[ATV]-[ADG]-[AIV]-[EPQ]-x-[GIL]-x(3)-[ALP]-x-[AGIV]-[ATV]-x(2)-[EGS]-x(2)-[ET]-x(4)-[AGIV]-x(3)-[ADEGNQ] Occurences: 13(13) GVP1_HALHA : 13- 58: laevl DrvLdkGVvVDVwArvslVGIEiLtveArVVaaSvdTflhyAeeiA kieqa GVP2_HALHA : 13- 58: laevl DrvLdkGVvVDVwArislVGIEiLtveArVVaaSvdTflhyAeeiA kieqa GVPA_APHFL : 16- 61: laevi DriLdkGIvIDAwVrvslVGIElLaieArIViaSveTylkyAeavG ltqsa GVPA_FREDI : 16- 61: laevi DriLdkGIvVDAwVrvslVGIElLaieArIViaSveTylkyAeavG ltqsa GVPA_HALME : 14- 59: laevl DrvLdkGVvVDVwArislVGIEiLtveArVVaaSvdTflhyAeeiA kieqa GVPA_MICBC : 16- 61: laevi DriLdkGIvIDAwArvslVGIElLaieArVViaSveTylkyAeavG ltqxa GVPA_PSEAN : 16- 61: laevi DriLdkGIvIDAwVrvslVGIElLsieArVViaSveTylkyAeavG ltasa GVPJ_HALHA : 37- 81: avsvg DteLl-GIeLRAaIasfeTAAEyGlefPtGTdmErvEsaanIspdQ sdpas GVPJ_HALME : 37- 81: avsig DteLl-GIeLRAaVasfeTAAQyGlefPtGTdmErvEeaagIspdE srsld GVPJ_HALSA : 37- 81: avsvg DteLl-GVeLRAaIasfeTAAEyGldfPtGTdmErvTaaagVdadD sksvl GVPM_HALHA : 16- 61: ivefv DvlLrdGAvIQAdVivtvADIPlIgisLrAAiaGmtTmteyGlfeE wdaah GVPM_HALME : 16- 61: ivefv DvlLrdGAvIQAdVivtvADIPlLgisLrAAiaGmtTmtayGmfeN wdath GVPM_HALSA : 16- 61: ivefv DvlLrdGAvIQAdAivtvAGVPlLgisLrAAiaGmtTmteyGifdG wdadh I 9: 55.7608 13( 13) A-x(0,2)-E-x-[ILV]-[DE]-x-[ILV]-L-x(0,1)-D-x-[AG]-[IV]-[IV]-x-[ADN]-[ADV]-x-[AIV]-x(2)-[SV]-[AILV]-[DGV]-x(3)-[IL]-[GL] Occurences: 13(13) GVP1_HALHA : 9- 36: dssgl A--EvLDrVL-DkGVVvDVwArvSLVgieIL tvear GVP2_HALHA : 9- 36: dsssl A--EvLDrVL-DkGVVvDVwAriSLVgieIL tvear GVPA_APHFL : 12- 39: ssssl A--EvIDrIL-DkGIViDAwVrvSLVgieLL aiear GVPA_FREDI : 12- 39: ssssl A--EvIDrIL-DkGIVvDAwVrvSLVgieLL aiear GVPA_HALME : 10- 37: dsssl A--EvLDrVL-DkGVVvDVwAriSLVgieIL tvear GVPA_MICBC : 12- 39: ssssl A--EvIDrIL-DkGIViDAwArvSLVgieLL aiear GVPA_PSEAN : 12- 39: ssssl A--EvIDrIL-DkGIViDAwVrvSLVgieLL siear GVPJ_HALHA : 14- 41: sqgdl A--EmLEmLL-DkGVVvNAdIavSVGdteLL gielr GVPJ_HALME : 14- 41: sqgdl A--EmLEmLL-DkGVViNAdIavSIGdteLL gielr GVPJ_HALSA : 14- 41: sqgdl A--EtLElLL-DkGVVvNAdIavSVGdteLL gvelr GVPM_HALHA : 10- 40: kdeth AivEfVDvLLrDgAVIqADvIvtVADiplIG islra GVPM_HALME : 10- 40: kdeth AivEfVDvLLrDgAVIqADvIvtVADiplLG islra GVPM_HALSA : 10- 40: krnsh AivEfVDvLLrDgAVIqADaIvtVAGvplLG islra J 10: 40.5996 22( 13) L-x(4,5)-R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] Occurences: 22(13) GVP1_HALHA : 36- 54: vgiei Ltvea-RVVAASVDTflhYA eeiak GVP2_HALHA : 36- 54: vgiei Ltvea-RVVAASVDTflhYA eeiak GVPA_APHFL : 38- 57: lvgie LlaieaRIVIASVETylkYA eavgl GVPA_APHFL : 39- 57: vgiel Laiea-RIVIASVETylkYA eavgl GVPA_FREDI : 38- 57: lvgie LlaieaRIVIASVETylkYA eavgl GVPA_FREDI : 39- 57: vgiel Laiea-RIVIASVETylkYA eavgl GVPA_HALME : 37- 55: vgiei Ltvea-RVVAASVDTflhYA eeiak GVPA_MICBC : 38- 57: lvgie LlaieaRVVIASVETylkYA eavgl GVPA_MICBC : 39- 57: vgiel Laiea-RVVIASVETylkYA eavgl GVPA_PSEAN : 38- 57: lvgie LlsieaRVVIASVETylkYA eavgl GVPA_PSEAN : 39- 57: vgiel Lsiea-RVVIASVETylkYA eavgl GVPJ_HALHA : 40- 59: vgdte LlgielRAAIASFETaaeYG lefpt GVPJ_HALHA : 41- 59: gdtel Lgiel-RAAIASFETaaeYG lefpt GVPJ_HALME : 40- 59: igdte LlgielRAAVASFETaaqYG lefpt GVPJ_HALME : 41- 59: gdtel Lgiel-RAAVASFETaaqYG lefpt GVPJ_HALSA : 40- 59: vgdte LlgvelRAAIASFETaaeYG ldfpt GVPJ_HALSA : 41- 59: gdtel Lgvel-RAAIASFETaaeYG ldfpt GVPM_HALHA : 38- 57: vadip LigislRAAIAGMTTmteYG lfeew GVPM_HALME : 38- 57: vadip LlgislRAAIAGMTTmtaYG mfenw GVPM_HALME : 39- 57: adipl Lgisl-RAAIAGMTTmtaYG mfenw GVPM_HALSA : 38- 57: vagvp LlgislRAAIAGMTTmteYG ifdgw GVPM_HALSA : 39- 57: agvpl Lgisl-RAAIAGMTTmteYG ifdgw K 11: 36.9295 13( 13) R-[AIV]-[AV]-[AIV]-A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] Occurences: 13(13) GVP1_HALHA : 41- 54: ltvea RVVAASVDTflhYA eeiak GVP2_HALHA : 41- 54: ltvea RVVAASVDTflhYA eeiak GVPA_APHFL : 44- 57: laiea RIVIASVETylkYA eavgl GVPA_FREDI : 44- 57: laiea RIVIASVETylkYA eavgl GVPA_HALME : 42- 55: ltvea RVVAASVDTflhYA eeiak GVPA_MICBC : 44- 57: laiea RVVIASVETylkYA eavgl GVPA_PSEAN : 44- 57: lsiea RVVIASVETylkYA eavgl GVPJ_HALHA : 46- 59: lgiel RAAIASFETaaeYG lefpt GVPJ_HALME : 46- 59: lgiel RAAVASFETaaqYG lefpt GVPJ_HALSA : 46- 59: lgvel RAAIASFETaaeYG ldfpt GVPM_HALHA : 44- 57: igisl RAAIAGMTTmteYG lfeew GVPM_HALME : 44- 57: lgisl RAAIAGMTTmtaYG mfenw GVPM_HALSA : 44- 57: lgisl RAAIAGMTTmteYG ifdgw L 12: 32.6621 13( 13) L-[ILV]-G-x(2,3)-L-x(1,3)-A-x-[AIV]-[AV]-x(2)-[EST]-[TV]-x-[AT] Occurences: 13(13) GVP1_HALHA : 30- 49: warvs LVGieiLtveArVVaaSVdT flhya GVP2_HALHA : 30- 49: waris LVGieiLtveArVVaaSVdT flhya GVPA_APHFL : 33- 52: wvrvs LVGielLaieArIViaSVeT ylkya GVPA_FREDI : 33- 52: wvrvs LVGielLaieArIViaSVeT ylkya GVPA_HALME : 31- 50: waris LVGieiLtveArVVaaSVdT flhya GVPA_MICBC : 33- 52: warvs LVGielLaieArVViaSVeT ylkya GVPA_PSEAN : 33- 52: wvrvs LVGielLsieArVViaSVeT ylkya GVPJ_HALHA : 40- 56: vgdte LLGie-Lr--AaIAsfETaA eygle GVPJ_HALME : 40- 56: igdte LLGie-Lr--AaVAsfETaA qygle GVPJ_HALSA : 40- 56: vgdte LLGve-Lr--AaIAsfETaA eygld GVPM_HALHA : 38- 54: vadip LIGis-Lr--AaIAgmTTmT eyglf GVPM_HALME : 38- 54: vadip LLGis-Lr--AaIAgmTTmT aygmf GVPM_HALSA : 38- 54: vagvp LLGis-Lr--AaIAgmTTmT eygif M 13: 24.2427 13( 13) A-[GS]-[FMV]-[DET]-T-x(3)-Y-[AG] Occurences: 13(13) GVP1_HALHA : 45- 54: arvva ASVDTflhYA eeiak GVP2_HALHA : 45- 54: arvva ASVDTflhYA eeiak GVPA_APHFL : 48- 57: arivi ASVETylkYA eavgl GVPA_FREDI : 48- 57: arivi ASVETylkYA eavgl GVPA_HALME : 46- 55: arvva ASVDTflhYA eeiak GVPA_MICBC : 48- 57: arvvi ASVETylkYA eavgl GVPA_PSEAN : 48- 57: arvvi ASVETylkYA eavgl GVPJ_HALHA : 50- 59: lraai ASFETaaeYG lefpt GVPJ_HALME : 50- 59: lraav ASFETaaqYG lefpt GVPJ_HALSA : 50- 59: lraai ASFETaaeYG ldfpt GVPM_HALHA : 48- 57: lraai AGMTTmteYG lfeew GVPM_HALME : 48- 57: lraai AGMTTmtaYG mfenw GVPM_HALSA : 48- 57: lraai AGMTTmteYG ifdgw N 14: 24.1745 13( 13) E-x-[ILV]-[DE]-x-[ILV]-L-x(0,1)-D-x(0,1)-G Occurences: 13(13) GVP1_HALHA : 10- 19: ssgla EvLDrVL-DkG vvvdv GVP2_HALHA : 10- 19: sssla EvLDrVL-DkG vvvdv GVPA_APHFL : 13- 22: sssla EvIDrIL-DkG ivida GVPA_FREDI : 13- 22: sssla EvIDrIL-DkG ivvda GVPA_HALME : 11- 20: sssla EvLDrVL-DkG vvvdv GVPA_MICBC : 13- 22: sssla EvIDrIL-DkG ivida GVPA_PSEAN : 13- 22: sssla EvIDrIL-DkG ivida GVPJ_HALHA : 15- 24: qgdla EmLEmLL-DkG vvvna GVPJ_HALME : 15- 24: qgdla EmLEmLL-DkG vvina GVPJ_HALSA : 15- 24: qgdla EtLElLL-DkG vvvna GVPM_HALHA : 13- 22: thaiv EfVDvLLrD-G aviqa GVPM_HALME : 13- 22: thaiv EfVDvLLrD-G aviqa GVPM_HALSA : 13- 22: shaiv EfVDvLLrD-G aviqa O 15: 17.4058 13( 13) L-[HKR]-x-A-x(1,3)-A-x(3)-[QT] Occurences: 13(13) GVP1_HALHA : 51- 62: svdtf LHyAeeiAkieQ aelta GVP2_HALHA : 51- 62: svdtf LHyAeeiAkieQ aelta GVPA_APHFL : 54- 63: svety LKyAe--AvglT qsaav GVPA_FREDI : 54- 63: svety LKyAe--AvglT qsaav GVPA_HALME : 52- 63: svdtf LHyAeeiAkieQ aelta GVPA_MICBC : 54- 63: svety LKyAe--AvglT qxaxx GVPA_PSEAN : 54- 63: svety LKyAe--AvglT asaav GVPJ_HALHA : 45- 54: llgie LRaAi--AsfeT aaeyg GVPJ_HALME : 45- 54: llgie LRaAv--AsfeT aaqyg GVPJ_HALSA : 45- 54: llgve LRaAi--AsfeT aaeyg GVPM_HALHA : 43- 52: ligis LRaAi--AgmtT mteyg GVPM_HALME : 43- 52: llgis LRaAi--AgmtT mtayg GVPM_HALSA : 43- 52: llgis LRaAi--AgmtT mteyg P 16: 16.7614 15( 13) A-x(1,3)-I-A-x(3)-[GQT]-x(4)-[AGL] Occurences: 15(13) GVP1_HALHA : 54- 67: tflhy Aee-IAkieQaeltA gaeaa GVP2_HALHA : 54- 67: tflhy Aee-IAkieQaeltA gaeap GVPA_APHFL : 43- 57: llaie ArivIAsveTylkyA eavgl GVPA_FREDI : 43- 57: llaie ArivIAsveTylkyA eavgl GVPA_HALME : 55- 68: tflhy Aee-IAkieQaeltA gaeaa GVPA_MICBC : 43- 57: llaie ArvvIAsveTylkyA eavgl GVPA_PSEAN : 43- 57: llsie ArvvIAsveTylkyA eavgl GVPJ_HALHA : 29- 41: gvvvn Ad--IAvsvGdtelL gielr GVPJ_HALHA : 47- 59: gielr Aa--IAsfeTaaeyG lefpt GVPJ_HALME : 29- 41: gvvin Ad--IAvsiGdtelL gielr GVPJ_HALSA : 29- 41: gvvvn Ad--IAvsvGdtelL gvelr GVPJ_HALSA : 47- 59: gvelr Aa--IAsfeTaaeyG ldfpt GVPM_HALHA : 45- 57: gislr Aa--IAgmtTmteyG lfeew GVPM_HALME : 45- 57: gislr Aa--IAgmtTmtayG mfenw GVPM_HALSA : 45- 57: gislr Aa--IAgmtTmteyG ifdgw Q 17: 16.7477 21( 13) L-x(3,4)-A-x(3,4)-A-[ADS]-x(2)-[GTV] Occurences: 21(13) GVP1_HALHA : 36- 49: vgiei Ltve-ArvvaASvdT flhya GVP2_HALHA : 36- 49: vgiei Ltve-ArvvaASvdT flhya GVPA_APHFL : 38- 52: lvgie LlaieAriviASveT ylkya GVPA_APHFL : 39- 52: vgiel Laie-AriviASveT ylkya GVPA_FREDI : 38- 52: lvgie LlaieAriviASveT ylkya GVPA_FREDI : 39- 52: vgiel Laie-AriviASveT ylkya GVPA_HALME : 37- 50: vgiei Ltve-ArvvaASvdT flhya GVPA_MICBC : 38- 52: lvgie LlaieArvviASveT ylkya GVPA_MICBC : 39- 52: vgiel Laie-ArvviASveT ylkya GVPA_PSEAN : 38- 52: lvgie LlsieArvviASveT ylkya GVPA_PSEAN : 39- 52: vgiel Lsie-ArvviASveT ylkya GVPA_PSEAN : 54- 68: svety LkyaeAvgltASaaV paa GVPJ_HALHA : 45- 59: llgie LraaiAsfetAAeyG lefpt GVPJ_HALME : 45- 59: llgie LraavAsfetAAqyG lefpt GVPJ_HALSA : 45- 59: llgve LraaiAsfetAAeyG ldfpt GVPM_HALHA : 18- 31: efvdv LlrdgAviq-ADviV tvadi GVPM_HALHA : 19- 31: fvdvl Lrdg-Aviq-ADviV tvadi GVPM_HALME : 18- 31: efvdv LlrdgAviq-ADviV tvadi GVPM_HALME : 19- 31: fvdvl Lrdg-Aviq-ADviV tvadi GVPM_HALSA : 18- 31: efvdv LlrdgAviq-ADaiV tvagv GVPM_HALSA : 19- 31: fvdvl Lrdg-Aviq-ADaiV tvagv R 18: 15.1803 14( 13) L-x(3)-[AG]-x-V-x(1,2)-A Occurences: 14(13) GVP1_HALHA : 36- 44: vgiei LtveArVv-A asvdt GVP1_HALHA : 36- 45: vgiei LtveArVvaA svdtf GVP2_HALHA : 36- 44: vgiei LtveArVv-A asvdt GVP2_HALHA : 36- 45: vgiei LtveArVvaA svdtf GVPA_APHFL : 62- 70: aeavg LtqsAaVp-A GVPA_FREDI : 62- 70: aeavg LtqsAaVp-A GVPA_HALME : 37- 45: vgiei LtveArVv-A asvdt GVPA_HALME : 37- 46: vgiei LtveArVvaA svdtf GVPA_MICBC : 39- 48: vgiel LaieArVviA svety GVPA_PSEAN : 39- 48: vgiel LsieArVviA svety GVPA_PSEAN : 62- 70: aeavg LtasAaVp-A a GVPA_PSEAN : 62- 71: aeavg LtasAaVpaA GVPJ_HALHA : 20- 29: emlem LldkGvVvnA diavs GVPJ_HALME : 20- 29: emlem LldkGvVinA diavs GVPJ_HALSA : 20- 29: etlel LldkGvVvnA diavs GVPM_HALHA : 18- 27: efvdv LlrdGaViqA dvivt GVPM_HALME : 18- 27: efvdv LlrdGaViqA dvivt GVPM_HALSA : 18- 27: efvdv LlrdGaViqA daivt S 19: 14.6088 13( 13) A-x(0,1)-A-[GSV]-x(2)-T Occurences: 13(13) GVP1_HALHA : 44- 49: earvv A-ASvdT flhya GVP2_HALHA : 44- 49: earvv A-ASvdT flhya GVPA_APHFL : 57- 63: tylky AeAVglT qsaav GVPA_FREDI : 57- 63: tylky AeAVglT qsaav GVPA_HALME : 45- 50: earvv A-ASvdT flhya GVPA_MICBC : 57- 63: tylky AeAVglT qxaxx GVPA_PSEAN : 57- 63: tylky AeAVglT asaav GVPJ_HALHA : 48- 54: ielra AiASfeT aaeyg GVPJ_HALME : 48- 54: ielra AvASfeT aaqyg GVPJ_HALSA : 48- 54: velra AiASfeT aaeyg GVPM_HALHA : 46- 52: islra AiAGmtT mteyg GVPM_HALME : 46- 52: islra AiAGmtT mtayg GVPM_HALSA : 46- 52: islra AiAGmtT mteyg T 20: 14.2396 14( 13) L-x(2,3)-A-x-A-x(3)-[ANPT] Occurences: 14(13) GVP1_HALHA : 65- 75: ieqae LtagAeAapeA GVP2_HALHA : 65- 75: ieqae LtagAeApepA pea GVPA_APHFL : 54- 63: svety Lky-AeAvglT qsaav GVPA_FREDI : 54- 63: svety Lky-AeAvglT qsaav GVPA_HALME : 66- 76: ieqae LtagAeAaptP ea GVPA_MICBC : 54- 63: svety Lky-AeAvglT qxaxx GVPA_PSEAN : 54- 63: svety Lky-AeAvglT asaav GVPJ_HALHA : 45- 54: llgie Lra-AiAsfeT aaeyg GVPJ_HALME : 45- 54: llgie Lra-AvAsfeT aaqyg GVPJ_HALME : 97- 107: eqmde LpgeAgAsvsN tapqe GVPJ_HALSA : 45- 54: llgve Lra-AiAsfeT aaeyg GVPM_HALHA : 43- 52: ligis Lra-AiAgmtT mteyg GVPM_HALME : 43- 52: llgis Lra-AiAgmtT mtayg GVPM_HALSA : 43- 52: llgis Lra-AiAgmtT mteyg Number of patterns evaluated by Pratt:283 Total running time: 1 seconds