------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 26 sequences from file FORK_HEAD_2 PATTERN CONSERVATION: CM: min Nr of Seqs to Match 26 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename FORK_HEAD_2.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: BF1_RAT 480 FD1_DROME 128 FD2_DROME 134 FD3_DROME 128 FD4_DROME 128 FD5_DROME 128 FHL1_YEAST 936 FKH1_XENLA 400 FKH1_YEAST 484 FKH2_XENLA 427 FKH2_YEAST 862 FKH_DROME 510 HCM1_YEAST 564 HN3A_MOUSE 468 HN3A_RAT 466 HN3B_MOUSE 459 HN3B_RAT 458 HN3G_MOUSE 353 HN3G_RAT 354 HTLF_HUMAN 321 ILF_HUMAN 543 LI31_CAEEL 237 MNF_MOUSE 617 SLP1_DROME 322 SLP2_DROME 445 XFD1_XENLA 399 Pratt run started at Thu Feb 6 19:30:01 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 37.0305 26( 26) W-x(2)-S-x-R-H-x-L-S-x-N-x(1,2)-F-x-K 2: 32.8604 26( 26) S-x-R-H-x-L-S-x-N-x(1,2)-F-x-K 3: 28.6904 26( 26) R-H-x-L-S-x-N-x(1,2)-F-x-K 4: 24.5203 26( 26) H-x-L-S-x-N-x(1,2)-F-x-K 5: 20.3503 26( 26) L-S-x-N-x(1,2)-F-x-K 6: 19.8503 26( 26) Q-x(1,2)-S-x(2,3)-H-x-L-S 7: 16.6802 26( 26) G-K-G-x(2)-W 8: 16.1802 26( 26) S-x-N-x(1,2)-F-x-K 9: 16.1802 28( 26) N-S-x(3,4)-L-S 10: 15.6802 29( 26) R-x(2,3)-L-S-x(3,4)-F 11: 15.6802 29( 26) S-x(1,2)-R-x(2,3)-L-S 12: 15.1802 27( 26) S-L-x(0,2)-N-x(1,2)-F 13: 12.5102 26( 26) K-G-x(2)-W 14: 12.5102 29( 26) Q-x-S-x(5)-S 15: 12.5102 26( 26) K-P-P 16: 12.5102 37( 26) K-x-P-x-S 17: 12.0102 27( 26) N-x(1,2)-F-x-K 18: 12.0102 33( 26) L-x(2)-N-x(1,2)-F 19: 12.0102 29( 26) Q-N-x(0,1)-S 20: 12.0102 42( 26) I-x(3)-I-x(3,4)-P Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 52.6511 26( 26) W-x-[NS]-S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] B 2: 49.9893 26( 26) W-x-[NS]-S-x-R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] C 3: 45.2598 26( 26) S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] D 4: 45.2329 26( 26) W-x-[NS]-S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F E 5: 42.5711 26( 26) W-x-[NS]-S-x-R-H-[NS]-L-S-[FL]-N-x(1,2)-F F 6: 38.4279 26( 26) R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] G 7: 37.8415 26( 26) S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F H 8: 34.2578 26( 26) H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] I 9: 31.0097 26( 26) R-H-[NS]-L-S-[FL]-N-x(1,2)-F J 10: 26.8863 27( 26) S-x(1,2)-R-x(2)-L-S-[FL]-N-x(2)-[FL] K 11: 26.8665 26( 26) L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] L 12: 26.8396 26( 26) H-[NS]-L-S-[FL]-N-x(1,2)-F M 13: 25.8658 26( 26) Q-[ENRS]-S-x-[DRS]-x-[ANS]-x-S-[FIL]-[DN] N 14: 23.5984 26( 26) R-x(2)-L-S-x(3,4)-F-x-K-x(2)-[KR] O 15: 23.0592 26( 26) Q-x(1,2)-S-x(2,3)-H-x-L-S-x-[NV] P 16: 22.6964 26( 26) S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Q 17: 21.5310 26( 26) G-K-G-x(2)-W-x-[ILV]-x-[DEPS] R 18: 19.4482 26( 26) L-S-[FL]-N-x(1,2)-F S 19: 18.7994 27( 26) N-S-x(3,4)-L-S-x-[NST] T 20: 18.4011 26( 26) S-L-x(0,2)-N-x(1,2)-F-x-[DK] Best patterns with alignements: fitness hits(seqs) Pattern A 1: 52.6511 26( 26) W-x-[NS]-S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 216- 235: enkqg WqNSIRHNLSLNkcFvKvpR hyddp FD1_DROME : 60- 79: dnkqg WqNSIRHNLSLNecFvKvaR ddkkp FD2_DROME : 60- 79: enkqg WqNSIRHNLSLNdcFvKipR dknti FD3_DROME : 60- 79: dkfpa WqNSIRHNLSLNdcFiKvpR epgnp FD4_DROME : 60- 79: kntqr WqNSLRHNLSFNdcFiKvpR rpdrp FD5_DROME : 60- 79: kntqk WqNSLRHNLSFNdcFiKvpR nvtka FHL1_YEAST : 506- 525: ycpdg WqSSVRHNLSLNksFrKvsK egkgw FKH1_XENLA : 163- 182: qnqqr WqNSIRHSLSFNdcFiKvpR spekp FKH1_YEAST : 347- 366: fsqma WqNSVRHNLSLNkaFeKvpK ragqq FKH2_XENLA : 201- 220: qnqqr WqNSIRHSLSFNdcFiKvsR spdkp FKH2_YEAST : 384- 403: faksg WqNSIRHNLSLNkaFeKvpR rpnep FKH_DROME : 254- 273: qnqqr WqNSIRHSLSFNdcFvKipR tpdkp HCM1_YEAST : 153- 172: qkdas WqNSIRHNLSLNdaFiKteK scdgk HN3A_MOUSE : 214- 233: qnqqr WqNSIRHSLSFNdcFvKvaR spdkp HN3A_RAT : 214- 233: qnqqr WqNSIRHSLSFNacFvKvaR spdkp HN3B_MOUSE : 203- 222: qnqqr WqNSIRHSLSFNdcFlKvpR spdkp HN3B_RAT : 203- 221: qnqqr WqNSIRHSLSFNd-FlKvpR apdkp HN3G_MOUSE : 163- 182: enqqr WqNSIRHSLSFNdcFvKvaR spdkp HN3G_RAT : 163- 182: enqqr WqNSIRHSLSFNdcFvKvaR spdkp HTLF_HUMAN : 66- 85: taptg WkNSVRHNLSLNkcFqKveR shgkv ILF_HUMAN : 185- 204: tadkg WqNSIRHNLSLNryFiKvpR sqeep LI31_CAEEL : 57- 76: kntqr WqNSLRHNLSFNdcFiKipR radrp MNF_MOUSE : 333- 352: tadkg WqNSIRHNLSLNryFiKvpR sqeep SLP1_DROME : 164- 183: ankrg WqNSIRHNLSLNkcFtKipR syddp SLP2_DROME : 224- 243: dnkqg WqNSIRHNLSLNkcFvKvpR hyddp XFD1_XENLA : 163- 182: qnqqr WqNSIRHSLSFNdcFvKvpR spekp B 2: 49.9893 26( 26) W-x-[NS]-S-x-R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 216- 235: enkqg WqNSiRHNLSLNkcFvKvpR hyddp FD1_DROME : 60- 79: dnkqg WqNSiRHNLSLNecFvKvaR ddkkp FD2_DROME : 60- 79: enkqg WqNSiRHNLSLNdcFvKipR dknti FD3_DROME : 60- 79: dkfpa WqNSiRHNLSLNdcFiKvpR epgnp FD4_DROME : 60- 79: kntqr WqNSlRHNLSFNdcFiKvpR rpdrp FD5_DROME : 60- 79: kntqk WqNSlRHNLSFNdcFiKvpR nvtka FHL1_YEAST : 506- 525: ycpdg WqSSvRHNLSLNksFrKvsK egkgw FKH1_XENLA : 163- 182: qnqqr WqNSiRHSLSFNdcFiKvpR spekp FKH1_YEAST : 347- 366: fsqma WqNSvRHNLSLNkaFeKvpK ragqq FKH2_XENLA : 201- 220: qnqqr WqNSiRHSLSFNdcFiKvsR spdkp FKH2_YEAST : 384- 403: faksg WqNSiRHNLSLNkaFeKvpR rpnep FKH_DROME : 254- 273: qnqqr WqNSiRHSLSFNdcFvKipR tpdkp HCM1_YEAST : 153- 172: qkdas WqNSiRHNLSLNdaFiKteK scdgk HN3A_MOUSE : 214- 233: qnqqr WqNSiRHSLSFNdcFvKvaR spdkp HN3A_RAT : 214- 233: qnqqr WqNSiRHSLSFNacFvKvaR spdkp HN3B_MOUSE : 203- 222: qnqqr WqNSiRHSLSFNdcFlKvpR spdkp HN3B_RAT : 203- 221: qnqqr WqNSiRHSLSFNd-FlKvpR apdkp HN3G_MOUSE : 163- 182: enqqr WqNSiRHSLSFNdcFvKvaR spdkp HN3G_RAT : 163- 182: enqqr WqNSiRHSLSFNdcFvKvaR spdkp HTLF_HUMAN : 66- 85: taptg WkNSvRHNLSLNkcFqKveR shgkv ILF_HUMAN : 185- 204: tadkg WqNSiRHNLSLNryFiKvpR sqeep LI31_CAEEL : 57- 76: kntqr WqNSlRHNLSFNdcFiKipR radrp MNF_MOUSE : 333- 352: tadkg WqNSiRHNLSLNryFiKvpR sqeep SLP1_DROME : 164- 183: ankrg WqNSiRHNLSLNkcFtKipR syddp SLP2_DROME : 224- 243: dnkqg WqNSiRHNLSLNkcFvKvpR hyddp XFD1_XENLA : 163- 182: qnqqr WqNSiRHSLSFNdcFvKvpR spekp C 3: 45.2598 26( 26) S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 219- 235: qgwqn SIRHNLSLNkcFvKvpR hyddp FD1_DROME : 63- 79: qgwqn SIRHNLSLNecFvKvaR ddkkp FD2_DROME : 63- 79: qgwqn SIRHNLSLNdcFvKipR dknti FD3_DROME : 63- 79: pawqn SIRHNLSLNdcFiKvpR epgnp FD4_DROME : 63- 79: qrwqn SLRHNLSFNdcFiKvpR rpdrp FD5_DROME : 63- 79: qkwqn SLRHNLSFNdcFiKvpR nvtka FHL1_YEAST : 509- 525: dgwqs SVRHNLSLNksFrKvsK egkgw FKH1_XENLA : 166- 182: qrwqn SIRHSLSFNdcFiKvpR spekp FKH1_YEAST : 350- 366: mawqn SVRHNLSLNkaFeKvpK ragqq FKH2_XENLA : 204- 220: qrwqn SIRHSLSFNdcFiKvsR spdkp FKH2_YEAST : 387- 403: sgwqn SIRHNLSLNkaFeKvpR rpnep FKH_DROME : 257- 273: qrwqn SIRHSLSFNdcFvKipR tpdkp HCM1_YEAST : 156- 172: aswqn SIRHNLSLNdaFiKteK scdgk HN3A_MOUSE : 217- 233: qrwqn SIRHSLSFNdcFvKvaR spdkp HN3A_RAT : 217- 233: qrwqn SIRHSLSFNacFvKvaR spdkp HN3B_MOUSE : 206- 222: qrwqn SIRHSLSFNdcFlKvpR spdkp HN3B_RAT : 206- 221: qrwqn SIRHSLSFNd-FlKvpR apdkp HN3G_MOUSE : 166- 182: qrwqn SIRHSLSFNdcFvKvaR spdkp HN3G_RAT : 166- 182: qrwqn SIRHSLSFNdcFvKvaR spdkp HTLF_HUMAN : 69- 85: tgwkn SVRHNLSLNkcFqKveR shgkv ILF_HUMAN : 188- 204: kgwqn SIRHNLSLNryFiKvpR sqeep LI31_CAEEL : 60- 76: qrwqn SLRHNLSFNdcFiKipR radrp MNF_MOUSE : 336- 352: kgwqn SIRHNLSLNryFiKvpR sqeep SLP1_DROME : 167- 183: rgwqn SIRHNLSLNkcFtKipR syddp SLP2_DROME : 227- 243: qgwqn SIRHNLSLNkcFvKvpR hyddp XFD1_XENLA : 166- 182: qrwqn SIRHSLSFNdcFvKvpR spekp D 4: 45.2329 26( 26) W-x-[NS]-S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F Occurences: 26(26) BF1_RAT : 216- 230: enkqg WqNSIRHNLSLNkcF vkvpr FD1_DROME : 60- 74: dnkqg WqNSIRHNLSLNecF vkvar FD2_DROME : 60- 74: enkqg WqNSIRHNLSLNdcF vkipr FD3_DROME : 60- 74: dkfpa WqNSIRHNLSLNdcF ikvpr FD4_DROME : 60- 74: kntqr WqNSLRHNLSFNdcF ikvpr FD5_DROME : 60- 74: kntqk WqNSLRHNLSFNdcF ikvpr FHL1_YEAST : 506- 520: ycpdg WqSSVRHNLSLNksF rkvsk FKH1_XENLA : 163- 177: qnqqr WqNSIRHSLSFNdcF ikvpr FKH1_YEAST : 347- 361: fsqma WqNSVRHNLSLNkaF ekvpk FKH2_XENLA : 201- 215: qnqqr WqNSIRHSLSFNdcF ikvsr FKH2_YEAST : 384- 398: faksg WqNSIRHNLSLNkaF ekvpr FKH_DROME : 254- 268: qnqqr WqNSIRHSLSFNdcF vkipr HCM1_YEAST : 153- 167: qkdas WqNSIRHNLSLNdaF iktek HN3A_MOUSE : 214- 228: qnqqr WqNSIRHSLSFNdcF vkvar HN3A_RAT : 214- 228: qnqqr WqNSIRHSLSFNacF vkvar HN3B_MOUSE : 203- 217: qnqqr WqNSIRHSLSFNdcF lkvpr HN3B_RAT : 203- 216: qnqqr WqNSIRHSLSFNd-F lkvpr HN3G_MOUSE : 163- 177: enqqr WqNSIRHSLSFNdcF vkvar HN3G_RAT : 163- 177: enqqr WqNSIRHSLSFNdcF vkvar HTLF_HUMAN : 66- 80: taptg WkNSVRHNLSLNkcF qkver ILF_HUMAN : 185- 199: tadkg WqNSIRHNLSLNryF ikvpr LI31_CAEEL : 57- 71: kntqr WqNSLRHNLSFNdcF ikipr MNF_MOUSE : 333- 347: tadkg WqNSIRHNLSLNryF ikvpr SLP1_DROME : 164- 178: ankrg WqNSIRHNLSLNkcF tkipr SLP2_DROME : 224- 238: dnkqg WqNSIRHNLSLNkcF vkvpr XFD1_XENLA : 163- 177: qnqqr WqNSIRHSLSFNdcF vkvpr E 5: 42.5711 26( 26) W-x-[NS]-S-x-R-H-[NS]-L-S-[FL]-N-x(1,2)-F Occurences: 26(26) BF1_RAT : 216- 230: enkqg WqNSiRHNLSLNkcF vkvpr FD1_DROME : 60- 74: dnkqg WqNSiRHNLSLNecF vkvar FD2_DROME : 60- 74: enkqg WqNSiRHNLSLNdcF vkipr FD3_DROME : 60- 74: dkfpa WqNSiRHNLSLNdcF ikvpr FD4_DROME : 60- 74: kntqr WqNSlRHNLSFNdcF ikvpr FD5_DROME : 60- 74: kntqk WqNSlRHNLSFNdcF ikvpr FHL1_YEAST : 506- 520: ycpdg WqSSvRHNLSLNksF rkvsk FKH1_XENLA : 163- 177: qnqqr WqNSiRHSLSFNdcF ikvpr FKH1_YEAST : 347- 361: fsqma WqNSvRHNLSLNkaF ekvpk FKH2_XENLA : 201- 215: qnqqr WqNSiRHSLSFNdcF ikvsr FKH2_YEAST : 384- 398: faksg WqNSiRHNLSLNkaF ekvpr FKH_DROME : 254- 268: qnqqr WqNSiRHSLSFNdcF vkipr HCM1_YEAST : 153- 167: qkdas WqNSiRHNLSLNdaF iktek HN3A_MOUSE : 214- 228: qnqqr WqNSiRHSLSFNdcF vkvar HN3A_RAT : 214- 228: qnqqr WqNSiRHSLSFNacF vkvar HN3B_MOUSE : 203- 217: qnqqr WqNSiRHSLSFNdcF lkvpr HN3B_RAT : 203- 216: qnqqr WqNSiRHSLSFNd-F lkvpr HN3G_MOUSE : 163- 177: enqqr WqNSiRHSLSFNdcF vkvar HN3G_RAT : 163- 177: enqqr WqNSiRHSLSFNdcF vkvar HTLF_HUMAN : 66- 80: taptg WkNSvRHNLSLNkcF qkver ILF_HUMAN : 185- 199: tadkg WqNSiRHNLSLNryF ikvpr LI31_CAEEL : 57- 71: kntqr WqNSlRHNLSFNdcF ikipr MNF_MOUSE : 333- 347: tadkg WqNSiRHNLSLNryF ikvpr SLP1_DROME : 164- 178: ankrg WqNSiRHNLSLNkcF tkipr SLP2_DROME : 224- 238: dnkqg WqNSiRHNLSLNkcF vkvpr XFD1_XENLA : 163- 177: qnqqr WqNSiRHSLSFNdcF vkvpr F 6: 38.4279 26( 26) R-H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 221- 235: wqnsi RHNLSLNkcFvKvpR hyddp FD1_DROME : 65- 79: wqnsi RHNLSLNecFvKvaR ddkkp FD2_DROME : 65- 79: wqnsi RHNLSLNdcFvKipR dknti FD3_DROME : 65- 79: wqnsi RHNLSLNdcFiKvpR epgnp FD4_DROME : 65- 79: wqnsl RHNLSFNdcFiKvpR rpdrp FD5_DROME : 65- 79: wqnsl RHNLSFNdcFiKvpR nvtka FHL1_YEAST : 511- 525: wqssv RHNLSLNksFrKvsK egkgw FKH1_XENLA : 168- 182: wqnsi RHSLSFNdcFiKvpR spekp FKH1_YEAST : 352- 366: wqnsv RHNLSLNkaFeKvpK ragqq FKH2_XENLA : 206- 220: wqnsi RHSLSFNdcFiKvsR spdkp FKH2_YEAST : 389- 403: wqnsi RHNLSLNkaFeKvpR rpnep FKH_DROME : 259- 273: wqnsi RHSLSFNdcFvKipR tpdkp HCM1_YEAST : 158- 172: wqnsi RHNLSLNdaFiKteK scdgk HN3A_MOUSE : 219- 233: wqnsi RHSLSFNdcFvKvaR spdkp HN3A_RAT : 219- 233: wqnsi RHSLSFNacFvKvaR spdkp HN3B_MOUSE : 208- 222: wqnsi RHSLSFNdcFlKvpR spdkp HN3B_RAT : 208- 221: wqnsi RHSLSFNd-FlKvpR apdkp HN3G_MOUSE : 168- 182: wqnsi RHSLSFNdcFvKvaR spdkp HN3G_RAT : 168- 182: wqnsi RHSLSFNdcFvKvaR spdkp HTLF_HUMAN : 71- 85: wknsv RHNLSLNkcFqKveR shgkv ILF_HUMAN : 190- 204: wqnsi RHNLSLNryFiKvpR sqeep LI31_CAEEL : 62- 76: wqnsl RHNLSFNdcFiKipR radrp MNF_MOUSE : 338- 352: wqnsi RHNLSLNryFiKvpR sqeep SLP1_DROME : 169- 183: wqnsi RHNLSLNkcFtKipR syddp SLP2_DROME : 229- 243: wqnsi RHNLSLNkcFvKvpR hyddp XFD1_XENLA : 168- 182: wqnsi RHSLSFNdcFvKvpR spekp G 7: 37.8415 26( 26) S-[ILV]-R-H-[NS]-L-S-[FL]-N-x(1,2)-F Occurences: 26(26) BF1_RAT : 219- 230: qgwqn SIRHNLSLNkcF vkvpr FD1_DROME : 63- 74: qgwqn SIRHNLSLNecF vkvar FD2_DROME : 63- 74: qgwqn SIRHNLSLNdcF vkipr FD3_DROME : 63- 74: pawqn SIRHNLSLNdcF ikvpr FD4_DROME : 63- 74: qrwqn SLRHNLSFNdcF ikvpr FD5_DROME : 63- 74: qkwqn SLRHNLSFNdcF ikvpr FHL1_YEAST : 509- 520: dgwqs SVRHNLSLNksF rkvsk FKH1_XENLA : 166- 177: qrwqn SIRHSLSFNdcF ikvpr FKH1_YEAST : 350- 361: mawqn SVRHNLSLNkaF ekvpk FKH2_XENLA : 204- 215: qrwqn SIRHSLSFNdcF ikvsr FKH2_YEAST : 387- 398: sgwqn SIRHNLSLNkaF ekvpr FKH_DROME : 257- 268: qrwqn SIRHSLSFNdcF vkipr HCM1_YEAST : 156- 167: aswqn SIRHNLSLNdaF iktek HN3A_MOUSE : 217- 228: qrwqn SIRHSLSFNdcF vkvar HN3A_RAT : 217- 228: qrwqn SIRHSLSFNacF vkvar HN3B_MOUSE : 206- 217: qrwqn SIRHSLSFNdcF lkvpr HN3B_RAT : 206- 216: qrwqn SIRHSLSFNd-F lkvpr HN3G_MOUSE : 166- 177: qrwqn SIRHSLSFNdcF vkvar HN3G_RAT : 166- 177: qrwqn SIRHSLSFNdcF vkvar HTLF_HUMAN : 69- 80: tgwkn SVRHNLSLNkcF qkver ILF_HUMAN : 188- 199: kgwqn SIRHNLSLNryF ikvpr LI31_CAEEL : 60- 71: qrwqn SLRHNLSFNdcF ikipr MNF_MOUSE : 336- 347: kgwqn SIRHNLSLNryF ikvpr SLP1_DROME : 167- 178: rgwqn SIRHNLSLNkcF tkipr SLP2_DROME : 227- 238: qgwqn SIRHNLSLNkcF vkvpr XFD1_XENLA : 166- 177: qrwqn SIRHSLSFNdcF vkvpr H 8: 34.2578 26( 26) H-[NS]-L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 222- 235: qnsir HNLSLNkcFvKvpR hyddp FD1_DROME : 66- 79: qnsir HNLSLNecFvKvaR ddkkp FD2_DROME : 66- 79: qnsir HNLSLNdcFvKipR dknti FD3_DROME : 66- 79: qnsir HNLSLNdcFiKvpR epgnp FD4_DROME : 66- 79: qnslr HNLSFNdcFiKvpR rpdrp FD5_DROME : 66- 79: qnslr HNLSFNdcFiKvpR nvtka FHL1_YEAST : 512- 525: qssvr HNLSLNksFrKvsK egkgw FKH1_XENLA : 169- 182: qnsir HSLSFNdcFiKvpR spekp FKH1_YEAST : 353- 366: qnsvr HNLSLNkaFeKvpK ragqq FKH2_XENLA : 207- 220: qnsir HSLSFNdcFiKvsR spdkp FKH2_YEAST : 390- 403: qnsir HNLSLNkaFeKvpR rpnep FKH_DROME : 260- 273: qnsir HSLSFNdcFvKipR tpdkp HCM1_YEAST : 159- 172: qnsir HNLSLNdaFiKteK scdgk HN3A_MOUSE : 220- 233: qnsir HSLSFNdcFvKvaR spdkp HN3A_RAT : 220- 233: qnsir HSLSFNacFvKvaR spdkp HN3B_MOUSE : 209- 222: qnsir HSLSFNdcFlKvpR spdkp HN3B_RAT : 209- 221: qnsir HSLSFNd-FlKvpR apdkp HN3G_MOUSE : 169- 182: qnsir HSLSFNdcFvKvaR spdkp HN3G_RAT : 169- 182: qnsir HSLSFNdcFvKvaR spdkp HTLF_HUMAN : 72- 85: knsvr HNLSLNkcFqKveR shgkv ILF_HUMAN : 191- 204: qnsir HNLSLNryFiKvpR sqeep LI31_CAEEL : 63- 76: qnslr HNLSFNdcFiKipR radrp MNF_MOUSE : 339- 352: qnsir HNLSLNryFiKvpR sqeep SLP1_DROME : 170- 183: qnsir HNLSLNkcFtKipR syddp SLP2_DROME : 230- 243: qnsir HNLSLNkcFvKvpR hyddp XFD1_XENLA : 169- 182: qnsir HSLSFNdcFvKvpR spekp I 9: 31.0097 26( 26) R-H-[NS]-L-S-[FL]-N-x(1,2)-F Occurences: 26(26) BF1_RAT : 221- 230: wqnsi RHNLSLNkcF vkvpr FD1_DROME : 65- 74: wqnsi RHNLSLNecF vkvar FD2_DROME : 65- 74: wqnsi RHNLSLNdcF vkipr FD3_DROME : 65- 74: wqnsi RHNLSLNdcF ikvpr FD4_DROME : 65- 74: wqnsl RHNLSFNdcF ikvpr FD5_DROME : 65- 74: wqnsl RHNLSFNdcF ikvpr FHL1_YEAST : 511- 520: wqssv RHNLSLNksF rkvsk FKH1_XENLA : 168- 177: wqnsi RHSLSFNdcF ikvpr FKH1_YEAST : 352- 361: wqnsv RHNLSLNkaF ekvpk FKH2_XENLA : 206- 215: wqnsi RHSLSFNdcF ikvsr FKH2_YEAST : 389- 398: wqnsi RHNLSLNkaF ekvpr FKH_DROME : 259- 268: wqnsi RHSLSFNdcF vkipr HCM1_YEAST : 158- 167: wqnsi RHNLSLNdaF iktek HN3A_MOUSE : 219- 228: wqnsi RHSLSFNdcF vkvar HN3A_RAT : 219- 228: wqnsi RHSLSFNacF vkvar HN3B_MOUSE : 208- 217: wqnsi RHSLSFNdcF lkvpr HN3B_RAT : 208- 216: wqnsi RHSLSFNd-F lkvpr HN3G_MOUSE : 168- 177: wqnsi RHSLSFNdcF vkvar HN3G_RAT : 168- 177: wqnsi RHSLSFNdcF vkvar HTLF_HUMAN : 71- 80: wknsv RHNLSLNkcF qkver ILF_HUMAN : 190- 199: wqnsi RHNLSLNryF ikvpr LI31_CAEEL : 62- 71: wqnsl RHNLSFNdcF ikipr MNF_MOUSE : 338- 347: wqnsi RHNLSLNryF ikvpr SLP1_DROME : 169- 178: wqnsi RHNLSLNkcF tkipr SLP2_DROME : 229- 238: wqnsi RHNLSLNkcF vkvpr XFD1_XENLA : 168- 177: wqnsi RHSLSFNdcF vkvpr J 10: 26.8863 27( 26) S-x(1,2)-R-x(2)-L-S-[FL]-N-x(2)-[FL] Occurences: 27(26) BF1_RAT : 219- 230: qgwqn Si-RhnLSLNkcF vkvpr FD1_DROME : 63- 74: qgwqn Si-RhnLSLNecF vkvar FD2_DROME : 63- 74: qgwqn Si-RhnLSLNdcF vkipr FD3_DROME : 63- 74: pawqn Si-RhnLSLNdcF ikvpr FD4_DROME : 63- 74: qrwqn Sl-RhnLSFNdcF ikvpr FD5_DROME : 63- 74: qkwqn Sl-RhnLSFNdcF ikvpr FHL1_YEAST : 508- 520: pdgwq SsvRhnLSLNksF rkvsk FHL1_YEAST : 509- 520: dgwqs Sv-RhnLSLNksF rkvsk FKH1_XENLA : 166- 177: qrwqn Si-RhsLSFNdcF ikvpr FKH1_YEAST : 350- 361: mawqn Sv-RhnLSLNkaF ekvpk FKH2_XENLA : 204- 215: qrwqn Si-RhsLSFNdcF ikvsr FKH2_YEAST : 387- 398: sgwqn Si-RhnLSLNkaF ekvpr FKH_DROME : 257- 268: qrwqn Si-RhsLSFNdcF vkipr HCM1_YEAST : 156- 167: aswqn Si-RhnLSLNdaF iktek HN3A_MOUSE : 217- 228: qrwqn Si-RhsLSFNdcF vkvar HN3A_RAT : 217- 228: qrwqn Si-RhsLSFNacF vkvar HN3B_MOUSE : 206- 217: qrwqn Si-RhsLSFNdcF lkvpr HN3B_RAT : 206- 217: qrwqn Si-RhsLSFNdfL kvpra HN3G_MOUSE : 166- 177: qrwqn Si-RhsLSFNdcF vkvar HN3G_RAT : 166- 177: qrwqn Si-RhsLSFNdcF vkvar HTLF_HUMAN : 69- 80: tgwkn Sv-RhnLSLNkcF qkver ILF_HUMAN : 188- 199: kgwqn Si-RhnLSLNryF ikvpr LI31_CAEEL : 60- 71: qrwqn Sl-RhnLSFNdcF ikipr MNF_MOUSE : 336- 347: kgwqn Si-RhnLSLNryF ikvpr SLP1_DROME : 167- 178: rgwqn Si-RhnLSLNkcF tkipr SLP2_DROME : 227- 238: qgwqn Si-RhnLSLNkcF vkvpr XFD1_XENLA : 166- 177: qrwqn Si-RhsLSFNdcF vkvpr K 11: 26.8665 26( 26) L-S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 224- 235: sirhn LSLNkcFvKvpR hyddp FD1_DROME : 68- 79: sirhn LSLNecFvKvaR ddkkp FD2_DROME : 68- 79: sirhn LSLNdcFvKipR dknti FD3_DROME : 68- 79: sirhn LSLNdcFiKvpR epgnp FD4_DROME : 68- 79: slrhn LSFNdcFiKvpR rpdrp FD5_DROME : 68- 79: slrhn LSFNdcFiKvpR nvtka FHL1_YEAST : 514- 525: svrhn LSLNksFrKvsK egkgw FKH1_XENLA : 171- 182: sirhs LSFNdcFiKvpR spekp FKH1_YEAST : 355- 366: svrhn LSLNkaFeKvpK ragqq FKH2_XENLA : 209- 220: sirhs LSFNdcFiKvsR spdkp FKH2_YEAST : 392- 403: sirhn LSLNkaFeKvpR rpnep FKH_DROME : 262- 273: sirhs LSFNdcFvKipR tpdkp HCM1_YEAST : 161- 172: sirhn LSLNdaFiKteK scdgk HN3A_MOUSE : 222- 233: sirhs LSFNdcFvKvaR spdkp HN3A_RAT : 222- 233: sirhs LSFNacFvKvaR spdkp HN3B_MOUSE : 211- 222: sirhs LSFNdcFlKvpR spdkp HN3B_RAT : 211- 221: sirhs LSFNd-FlKvpR apdkp HN3G_MOUSE : 171- 182: sirhs LSFNdcFvKvaR spdkp HN3G_RAT : 171- 182: sirhs LSFNdcFvKvaR spdkp HTLF_HUMAN : 74- 85: svrhn LSLNkcFqKveR shgkv ILF_HUMAN : 193- 204: sirhn LSLNryFiKvpR sqeep LI31_CAEEL : 65- 76: slrhn LSFNdcFiKipR radrp MNF_MOUSE : 341- 352: sirhn LSLNryFiKvpR sqeep SLP1_DROME : 172- 183: sirhn LSLNkcFtKipR syddp SLP2_DROME : 232- 243: sirhn LSLNkcFvKvpR hyddp XFD1_XENLA : 171- 182: sirhs LSFNdcFvKvpR spekp L 12: 26.8396 26( 26) H-[NS]-L-S-[FL]-N-x(1,2)-F Occurences: 26(26) BF1_RAT : 222- 230: qnsir HNLSLNkcF vkvpr FD1_DROME : 66- 74: qnsir HNLSLNecF vkvar FD2_DROME : 66- 74: qnsir HNLSLNdcF vkipr FD3_DROME : 66- 74: qnsir HNLSLNdcF ikvpr FD4_DROME : 66- 74: qnslr HNLSFNdcF ikvpr FD5_DROME : 66- 74: qnslr HNLSFNdcF ikvpr FHL1_YEAST : 512- 520: qssvr HNLSLNksF rkvsk FKH1_XENLA : 169- 177: qnsir HSLSFNdcF ikvpr FKH1_YEAST : 353- 361: qnsvr HNLSLNkaF ekvpk FKH2_XENLA : 207- 215: qnsir HSLSFNdcF ikvsr FKH2_YEAST : 390- 398: qnsir HNLSLNkaF ekvpr FKH_DROME : 260- 268: qnsir HSLSFNdcF vkipr HCM1_YEAST : 159- 167: qnsir HNLSLNdaF iktek HN3A_MOUSE : 220- 228: qnsir HSLSFNdcF vkvar HN3A_RAT : 220- 228: qnsir HSLSFNacF vkvar HN3B_MOUSE : 209- 217: qnsir HSLSFNdcF lkvpr HN3B_RAT : 209- 216: qnsir HSLSFNd-F lkvpr HN3G_MOUSE : 169- 177: qnsir HSLSFNdcF vkvar HN3G_RAT : 169- 177: qnsir HSLSFNdcF vkvar HTLF_HUMAN : 72- 80: knsvr HNLSLNkcF qkver ILF_HUMAN : 191- 199: qnsir HNLSLNryF ikvpr LI31_CAEEL : 63- 71: qnslr HNLSFNdcF ikipr MNF_MOUSE : 339- 347: qnsir HNLSLNryF ikvpr SLP1_DROME : 170- 178: qnsir HNLSLNkcF tkipr SLP2_DROME : 230- 238: qnsir HNLSLNkcF vkvpr XFD1_XENLA : 169- 177: qnsir HSLSFNdcF vkvpr M 13: 25.8658 26( 26) Q-[ENRS]-S-x-[DRS]-x-[ANS]-x-S-[FIL]-[DN] Occurences: 26(26) BF1_RAT : 217- 227: nkqgw QNSiRhNlSLN kcfvk FD1_DROME : 61- 71: nkqgw QNSiRhNlSLN ecfvk FD2_DROME : 61- 71: nkqgw QNSiRhNlSLN dcfvk FD3_DROME : 61- 71: kfpaw QNSiRhNlSLN dcfik FD4_DROME : 61- 71: ntqrw QNSlRhNlSFN dcfik FD5_DROME : 61- 71: ntqkw QNSlRhNlSFN dcfik FHL1_YEAST : 507- 517: cpdgw QSSvRhNlSLN ksfrk FKH1_XENLA : 164- 174: nqqrw QNSiRhSlSFN dcfik FKH1_YEAST : 348- 358: sqmaw QNSvRhNlSLN kafek FKH2_XENLA : 202- 212: nqqrw QNSiRhSlSFN dcfik FKH2_YEAST : 385- 395: aksgw QNSiRhNlSLN kafek FKH_DROME : 255- 265: nqqrw QNSiRhSlSFN dcfvk HCM1_YEAST : 154- 164: kdasw QNSiRhNlSLN dafik HN3A_MOUSE : 215- 225: nqqrw QNSiRhSlSFN dcfvk HN3A_RAT : 215- 225: nqqrw QNSiRhSlSFN acfvk HN3B_MOUSE : 204- 214: nqqrw QNSiRhSlSFN dcflk HN3B_RAT : 204- 214: nqqrw QNSiRhSlSFN dflkv HN3G_MOUSE : 164- 174: nqqrw QNSiRhSlSFN dcfvk HN3G_RAT : 164- 174: nqqrw QNSiRhSlSFN dcfvk HTLF_HUMAN : 197- 207: savrl QESdSlAtSID pkedh ILF_HUMAN : 186- 196: adkgw QNSiRhNlSLN ryfik LI31_CAEEL : 58- 68: ntqrw QNSlRhNlSFN dcfik MNF_MOUSE : 334- 344: adkgw QNSiRhNlSLN ryfik SLP1_DROME : 165- 175: nkrgw QNSiRhNlSLN kcftk SLP2_DROME : 225- 235: nkqgw QNSiRhNlSLN kcfvk XFD1_XENLA : 164- 174: nqqrw QNSiRhSlSFN dcfvk N 14: 23.5984 26( 26) R-x(2)-L-S-x(3,4)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 221- 235: wqnsi RhnLSlnkcFvKvpR hyddp FD1_DROME : 65- 79: wqnsi RhnLSlnecFvKvaR ddkkp FD2_DROME : 65- 79: wqnsi RhnLSlndcFvKipR dknti FD3_DROME : 65- 79: wqnsi RhnLSlndcFiKvpR epgnp FD4_DROME : 65- 79: wqnsl RhnLSfndcFiKvpR rpdrp FD5_DROME : 65- 79: wqnsl RhnLSfndcFiKvpR nvtka FHL1_YEAST : 511- 525: wqssv RhnLSlnksFrKvsK egkgw FKH1_XENLA : 168- 182: wqnsi RhsLSfndcFiKvpR spekp FKH1_YEAST : 352- 366: wqnsv RhnLSlnkaFeKvpK ragqq FKH2_XENLA : 206- 220: wqnsi RhsLSfndcFiKvsR spdkp FKH2_YEAST : 389- 403: wqnsi RhnLSlnkaFeKvpR rpnep FKH_DROME : 259- 273: wqnsi RhsLSfndcFvKipR tpdkp HCM1_YEAST : 158- 172: wqnsi RhnLSlndaFiKteK scdgk HN3A_MOUSE : 219- 233: wqnsi RhsLSfndcFvKvaR spdkp HN3A_RAT : 219- 233: wqnsi RhsLSfnacFvKvaR spdkp HN3B_MOUSE : 208- 222: wqnsi RhsLSfndcFlKvpR spdkp HN3B_RAT : 208- 221: wqnsi RhsLSfnd-FlKvpR apdkp HN3G_MOUSE : 168- 182: wqnsi RhsLSfndcFvKvaR spdkp HN3G_RAT : 168- 182: wqnsi RhsLSfndcFvKvaR spdkp HTLF_HUMAN : 71- 85: wknsv RhnLSlnkcFqKveR shgkv ILF_HUMAN : 190- 204: wqnsi RhnLSlnryFiKvpR sqeep LI31_CAEEL : 62- 76: wqnsl RhnLSfndcFiKipR radrp MNF_MOUSE : 338- 352: wqnsi RhnLSlnryFiKvpR sqeep SLP1_DROME : 169- 183: wqnsi RhnLSlnkcFtKipR syddp SLP2_DROME : 229- 243: wqnsi RhnLSlnkcFvKvpR hyddp XFD1_XENLA : 168- 182: wqnsi RhsLSfndcFvKvpR spekp O 15: 23.0592 26( 26) Q-x(1,2)-S-x(2,3)-H-x-L-S-x-[NV] Occurences: 26(26) BF1_RAT : 217- 227: nkqgw Qn-Sir-HnLSlN kcfvk FD1_DROME : 61- 71: nkqgw Qn-Sir-HnLSlN ecfvk FD2_DROME : 61- 71: nkqgw Qn-Sir-HnLSlN dcfvk FD3_DROME : 61- 71: kfpaw Qn-Sir-HnLSlN dcfik FD4_DROME : 61- 71: ntqrw Qn-Slr-HnLSfN dcfik FD5_DROME : 61- 71: ntqkw Qn-Slr-HnLSfN dcfik FHL1_YEAST : 507- 517: cpdgw Qs-Svr-HnLSlN ksfrk FKH1_XENLA : 164- 174: nqqrw Qn-Sir-HsLSfN dcfik FKH1_YEAST : 348- 358: sqmaw Qn-Svr-HnLSlN kafek FKH2_XENLA : 202- 212: nqqrw Qn-Sir-HsLSfN dcfik FKH2_YEAST : 385- 395: aksgw Qn-Sir-HnLSlN kafek FKH_DROME : 255- 265: nqqrw Qn-Sir-HsLSfN dcfvk HCM1_YEAST : 154- 164: kdasw Qn-Sir-HnLSlN dafik HN3A_MOUSE : 215- 225: nqqrw Qn-Sir-HsLSfN dcfvk HN3A_RAT : 215- 225: nqqrw Qn-Sir-HsLSfN acfvk HN3B_MOUSE : 204- 214: nqqrw Qn-Sir-HsLSfN dcflk HN3B_RAT : 204- 214: nqqrw Qn-Sir-HsLSfN dflkv HN3G_MOUSE : 164- 174: nqqrw Qn-Sir-HsLSfN dcfvk HN3G_RAT : 164- 174: nqqrw Qn-Sir-HsLSfN dcfvk HTLF_HUMAN : 122- 134: ssass QngSlspHyLSsV ikqnq ILF_HUMAN : 186- 196: adkgw Qn-Sir-HnLSlN ryfik LI31_CAEEL : 58- 68: ntqrw Qn-Slr-HnLSfN dcfik MNF_MOUSE : 334- 344: adkgw Qn-Sir-HnLSlN ryfik SLP1_DROME : 165- 175: nkrgw Qn-Sir-HnLSlN kcftk SLP2_DROME : 225- 235: nkqgw Qn-Sir-HnLSlN kcfvk XFD1_XENLA : 164- 174: nqqrw Qn-Sir-HsLSfN dcfvk P 16: 22.6964 26( 26) S-[FL]-N-x(1,2)-F-x-K-x(2)-[KR] Occurences: 26(26) BF1_RAT : 225- 235: irhnl SLNkcFvKvpR hyddp FD1_DROME : 69- 79: irhnl SLNecFvKvaR ddkkp FD2_DROME : 69- 79: irhnl SLNdcFvKipR dknti FD3_DROME : 69- 79: irhnl SLNdcFiKvpR epgnp FD4_DROME : 69- 79: lrhnl SFNdcFiKvpR rpdrp FD5_DROME : 69- 79: lrhnl SFNdcFiKvpR nvtka FHL1_YEAST : 515- 525: vrhnl SLNksFrKvsK egkgw FKH1_XENLA : 172- 182: irhsl SFNdcFiKvpR spekp FKH1_YEAST : 356- 366: vrhnl SLNkaFeKvpK ragqq FKH2_XENLA : 210- 220: irhsl SFNdcFiKvsR spdkp FKH2_YEAST : 393- 403: irhnl SLNkaFeKvpR rpnep FKH_DROME : 263- 273: irhsl SFNdcFvKipR tpdkp HCM1_YEAST : 162- 172: irhnl SLNdaFiKteK scdgk HN3A_MOUSE : 223- 233: irhsl SFNdcFvKvaR spdkp HN3A_RAT : 223- 233: irhsl SFNacFvKvaR spdkp HN3B_MOUSE : 212- 222: irhsl SFNdcFlKvpR spdkp HN3B_RAT : 212- 221: irhsl SFNd-FlKvpR apdkp HN3G_MOUSE : 172- 182: irhsl SFNdcFvKvaR spdkp HN3G_RAT : 172- 182: irhsl SFNdcFvKvaR spdkp HTLF_HUMAN : 75- 85: vrhnl SLNkcFqKveR shgkv ILF_HUMAN : 194- 204: irhnl SLNryFiKvpR sqeep LI31_CAEEL : 66- 76: lrhnl SFNdcFiKipR radrp MNF_MOUSE : 342- 352: irhnl SLNryFiKvpR sqeep SLP1_DROME : 173- 183: irhnl SLNkcFtKipR syddp SLP2_DROME : 233- 243: irhnl SLNkcFvKvpR hyddp XFD1_XENLA : 172- 182: irhsl SFNdcFvKvpR spekp Q 17: 21.5310 26( 26) G-K-G-x(2)-W-x-[ILV]-x-[DEPS] Occurences: 26(26) BF1_RAT : 241- 250: hyddp GKGnyWmLdP ssddv FD1_DROME : 85- 94: ddkkp GKGsyWtLdP dsynm FD2_DROME : 91- 100: dndsa GKGsyWmLdS sasdm FD3_DROME : 85- 94: epgnp GKGnfWtLdP laedm FD4_DROME : 85- 94: rpdrp GKGayWaLhP qafdm FD5_DROME : 85- 94: nvtka GKGsyWtLhP mafdm FHL1_YEAST : 527- 536: kvske GKGwlWgLdE eyiae FKH1_XENLA : 188- 197: spekp GKGsyWtLhP esgnm FKH1_YEAST : 372- 381: ragqq GKGmnWkIsD evrrd FKH2_XENLA : 226- 235: spdkp GKGsyWtLhP dsgnm FKH2_YEAST : 409- 418: rpnep GKGmkWrIsE syqqe FKH_DROME : 279- 288: tpdkp GKGsfWtLhP dsgnm HCM1_YEAST : 176- 185: ekscd GKGhfWeVrP gaetk HN3A_MOUSE : 239- 248: spdkp GKGsyWtLhP dsgnm HN3A_RAT : 239- 248: spdkp GKGsyWtLhP dsgnm HN3B_MOUSE : 228- 237: spdkp GKGsfWtLhP dsgnm HN3B_RAT : 227- 236: apdkp GKGsfWtLhP dsgnm HN3G_MOUSE : 188- 197: spdkp GKGsyWaLhP ssgnm HN3G_RAT : 188- 197: spdkp GKGsyWaLhP ssgnm HTLF_HUMAN : 92- 101: hgkvn GKGslWcVdP eykpn ILF_HUMAN : 210- 219: sqeep GKGsfWrIdP asesk LI31_CAEEL : 82- 91: radrp GKGsyWaVhP nasgm MNF_MOUSE : 358- 367: sqeep GKGsfWrIdP aseak SLP1_DROME : 189- 198: syddp GKGnyWiLdP saeev SLP2_DROME : 249- 258: hyddp GKGnyWmLdP saedv XFD1_XENLA : 188- 197: spekp GKGsyWtLhP esgnm R 18: 19.4482 26( 26) L-S-[FL]-N-x(1,2)-F Occurences: 26(26) BF1_RAT : 224- 230: sirhn LSLNkcF vkvpr FD1_DROME : 68- 74: sirhn LSLNecF vkvar FD2_DROME : 68- 74: sirhn LSLNdcF vkipr FD3_DROME : 68- 74: sirhn LSLNdcF ikvpr FD4_DROME : 68- 74: slrhn LSFNdcF ikvpr FD5_DROME : 68- 74: slrhn LSFNdcF ikvpr FHL1_YEAST : 514- 520: svrhn LSLNksF rkvsk FKH1_XENLA : 171- 177: sirhs LSFNdcF ikvpr FKH1_YEAST : 355- 361: svrhn LSLNkaF ekvpk FKH2_XENLA : 209- 215: sirhs LSFNdcF ikvsr FKH2_YEAST : 392- 398: sirhn LSLNkaF ekvpr FKH_DROME : 262- 268: sirhs LSFNdcF vkipr HCM1_YEAST : 161- 167: sirhn LSLNdaF iktek HN3A_MOUSE : 222- 228: sirhs LSFNdcF vkvar HN3A_RAT : 222- 228: sirhs LSFNacF vkvar HN3B_MOUSE : 211- 217: sirhs LSFNdcF lkvpr HN3B_RAT : 211- 216: sirhs LSFNd-F lkvpr HN3G_MOUSE : 171- 177: sirhs LSFNdcF vkvar HN3G_RAT : 171- 177: sirhs LSFNdcF vkvar HTLF_HUMAN : 74- 80: svrhn LSLNkcF qkver ILF_HUMAN : 193- 199: sirhn LSLNryF ikvpr LI31_CAEEL : 65- 71: slrhn LSFNdcF ikipr MNF_MOUSE : 341- 347: sirhn LSLNryF ikvpr SLP1_DROME : 172- 178: sirhn LSLNkcF tkipr SLP2_DROME : 232- 238: sirhn LSLNkcF vkvpr XFD1_XENLA : 171- 177: sirhs LSFNdcF vkvpr S 19: 18.7994 27( 26) N-S-x(3,4)-L-S-x-[NST] Occurences: 27(26) BF1_RAT : 218- 227: kqgwq NSirhnLSlN kcfvk FD1_DROME : 62- 71: kqgwq NSirhnLSlN ecfvk FD2_DROME : 62- 71: kqgwq NSirhnLSlN dcfvk FD3_DROME : 62- 71: fpawq NSirhnLSlN dcfik FD4_DROME : 62- 71: tqrwq NSlrhnLSfN dcfik FD5_DROME : 62- 71: tqkwq NSlrhnLSfN dcfik FHL1_YEAST : 119- 127: dealf NSnel-LShT mdpvn FKH1_XENLA : 165- 174: qqrwq NSirhsLSfN dcfik FKH1_YEAST : 349- 358: qmawq NSvrhnLSlN kafek FKH2_XENLA : 203- 212: qqrwq NSirhsLSfN dcfik FKH2_YEAST : 386- 395: ksgwq NSirhnLSlN kafek FKH_DROME : 256- 265: qqrwq NSirhsLSfN dcfvk HCM1_YEAST : 155- 164: daswq NSirhnLSlN dafik HN3A_MOUSE : 216- 225: qqrwq NSirhsLSfN dcfvk HN3A_RAT : 216- 225: qqrwq NSirhsLSfN acfvk HN3B_MOUSE : 205- 214: qqrwq NSirhsLSfN dcflk HN3B_RAT : 205- 214: qqrwq NSirhsLSfN dflkv HN3G_MOUSE : 165- 174: qqrwq NSirhsLSfN dcfvk HN3G_RAT : 165- 174: qqrwq NSirhsLSfN dcfvk HTLF_HUMAN : 68- 77: ptgwk NSvrhnLSlN kcfqk ILF_HUMAN : 187- 196: dkgwq NSirhnLSlN ryfik LI31_CAEEL : 59- 68: tqrwq NSlrhnLSfN dcfik MNF_MOUSE : 335- 344: dkgwq NSirhnLSlN ryfik SLP1_DROME : 47- 55: vhpys NSdge-LSaS edfds SLP1_DROME : 166- 175: krgwq NSirhnLSlN kcftk SLP2_DROME : 226- 235: kqgwq NSirhnLSlN kcfvk XFD1_XENLA : 165- 174: qqrwq NSirhsLSfN dcfvk T 20: 18.4011 26( 26) S-L-x(0,2)-N-x(1,2)-F-x-[DK] Occurences: 26(26) BF1_RAT : 225- 232: irhnl SL--NkcFvK vprhy FD1_DROME : 69- 76: irhnl SL--NecFvK vardd FD2_DROME : 69- 76: irhnl SL--NdcFvK iprdk FD3_DROME : 69- 76: irhnl SL--NdcFiK vprep FD4_DROME : 63- 72: qrwqn SLrhNlsFnD cfikv FD5_DROME : 63- 72: qkwqn SLrhNlsFnD cfikv FHL1_YEAST : 515- 522: vrhnl SL--NksFrK vskeg FKH1_XENLA : 170- 179: nsirh SLsfNdcFiK vprsp FKH1_YEAST : 356- 363: vrhnl SL--NkaFeK vpkra FKH2_XENLA : 208- 217: nsirh SLsfNdcFiK vsrsp FKH2_YEAST : 393- 400: irhnl SL--NkaFeK vprrp FKH_DROME : 261- 270: nsirh SLsfNdcFvK iprtp HCM1_YEAST : 162- 169: irhnl SL--NdaFiK teksc HN3A_MOUSE : 221- 230: nsirh SLsfNdcFvK varsp HN3A_RAT : 221- 230: nsirh SLsfNacFvK varsp HN3B_MOUSE : 210- 219: nsirh SLsfNdcFlK vprsp HN3B_RAT : 210- 218: nsirh SLsfNd-FlK vprap HN3G_MOUSE : 170- 179: nsirh SLsfNdcFvK varsp HN3G_RAT : 170- 179: nsirh SLsfNdcFvK varsp HTLF_HUMAN : 75- 82: vrhnl SL--NkcFqK versh ILF_HUMAN : 194- 201: irhnl SL--NryFiK vprsq LI31_CAEEL : 60- 69: qrwqn SLrhNlsFnD cfiki MNF_MOUSE : 342- 349: irhnl SL--NryFiK vprsq SLP1_DROME : 173- 180: irhnl SL--NkcFtK iprsy SLP2_DROME : 233- 240: irhnl SL--NkcFvK vprhy XFD1_XENLA : 170- 179: nsirh SLsfNdcFvK vprsp Number of patterns evaluated by Pratt:1062 Total running time: 3 seconds