------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 14 sequences from file FHA_DOMAIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 14 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename FHA_DOMAIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: CDS1_SCHPO 460 DUN1_YEAST 513 FHL1_YEAST 936 FKH1_YEAST 484 FKH2_YEAST 862 FRAH_ANASP 289 KAPP_ARATH 582 KI67_HUMAN 3256 MEK1_YEAST 497 MNF_MOUSE 617 SPK1_YEAST 821 YHR5_YEAST 416 YKI5_CAEEL 952 YOT2_CAEEL 710 Pratt run started at Thu Feb 6 19:28:11 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 12.0102 18( 14) S-x(1,2)-G-T 2: 11.5102 35( 14) S-x(2,3)-A-x(1,2)-S 3: 11.5102 30( 14) P-x(4,5)-S-x(2,3)-A 4: 11.5102 34( 14) P-x(0,1)-S-x(1,2)-S 5: 11.5102 35( 14) P-x(0,1)-S-x(0,1)-S 6: 11.5102 40( 14) P-x(1,2)-S-x(0,1)-S 7: 11.0102 26( 14) S-x(0,2)-L-x(3,4)-L 8: 11.0102 19( 14) I-x(0,2)-S-x(2,3)-G 9: 11.0102 20( 14) L-x(1,2)-P-x(1,3)-I 10: 11.0102 21( 14) L-x(3,4)-N-x(2,4)-L 11: 11.0102 23( 14) N-x(2,3)-L-x(1,3)-R 12: 11.0102 30( 14) N-x(4,5)-N-x(2,4)-L 13: 11.0102 46( 14) S-x(0,2)-S-x(4,5)-I 14: 11.0102 34( 14) S-x(0,2)-S-x(3,4)-I 15: 11.0102 17( 14) S-x(2,3)-G-x(3,5)-N 16: 11.0102 21( 14) S-x(2,3)-G-x(1,3)-N 17: 11.0102 32( 14) S-x(3,4)-A-x(3,5)-L 18: 11.0102 39( 14) S-x(2,3)-A-x(3,5)-L 19: 11.0102 36( 14) S-x(2,3)-A-x(2,4)-L 20: 11.0102 30( 14) S-x(3,5)-A-x(2,3)-L Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 12.9189 14( 14) S-x(2,3)-G-x(1,3)-N-x(3)-[AGILV] B 2: 12.0102 18( 14) S-x(1,2)-G-T C 3: 11.5102 35( 14) S-x(2,3)-A-x(1,2)-S D 4: 11.5102 30( 14) P-x(4,5)-S-x(2,3)-A E 5: 11.5102 34( 14) P-x(0,1)-S-x(1,2)-S F 6: 11.5102 35( 14) P-x(0,1)-S-x(0,1)-S G 7: 11.5102 40( 14) P-x(1,2)-S-x(0,1)-S H 8: 11.0102 26( 14) S-x(0,2)-L-x(3,4)-L I 9: 11.0102 19( 14) I-x(0,2)-S-x(2,3)-G J 10: 11.0102 20( 14) L-x(1,2)-P-x(1,3)-I K 11: 11.0102 21( 14) L-x(3,4)-N-x(2,4)-L L 12: 11.0102 23( 14) N-x(2,3)-L-x(1,3)-R M 13: 11.0102 30( 14) N-x(4,5)-N-x(2,4)-L N 14: 11.0102 46( 14) S-x(0,2)-S-x(4,5)-I O 15: 11.0102 34( 14) S-x(0,2)-S-x(3,4)-I P 16: 11.0102 17( 14) S-x(2,3)-G-x(3,5)-N Q 17: 11.0102 32( 14) S-x(3,4)-A-x(3,5)-L R 18: 11.0102 39( 14) S-x(2,3)-A-x(3,5)-L S 19: 11.0102 36( 14) S-x(2,3)-A-x(2,4)-L T 20: 11.0102 30( 14) S-x(3,5)-A-x(2,3)-L Best patterns with alignements: fitness hits(seqs) Pattern A 1: 12.9189 14( 14) S-x(2,3)-G-x(1,3)-N-x(3)-[AGILV] Occurences: 14(14) CDS1_SCHPO : 105- 116: flhdh Ssn-GtflNferL aknsr DUN1_YEAST : 101- 112: nvidk Srn-GtfiNgnrL vkkdy FHL1_YEAST : 343- 352: grfel Sii-Gk--NgafV ddifv FKH1_YEAST : 191- 202: mpkll Sty-GtngNnnpL lrnii FKH2_YEAST : 298- 308: npqaa Spq-Gpp-NtiiA anfvd FRAH_ANASP : 249- 260: iedvg Ssn-GtyiNnlpL lpgnr KAPP_ARATH : 249- 260: lvdmg Sln-GtlvNshsI shpdl KI67_HUMAN : 185- 195: tnvhs SehaGr--NgrnA adpis MEK1_YEAST : 91- 102: yvkdc Sln-GtylNgllL krdkt MNF_MOUSE : 106- 116: lmrqp SvtiGr--NssqG svdls SPK1_YEAST : 105- 116: llndi Stn-GtwlNgqkV eknsn YHR5_YEAST : 241- 252: lkdvk Sss-GtflNhqrL ssast YKI5_CAEEL : 89- 100: lvedi Sen-GtyiNdrrL skdkr YOT2_CAEEL : 154- 165: ifelg Sth-GsrmNkkrL ppkqy B 2: 12.0102 18( 14) S-x(1,2)-G-T Occurences: 18(14) CDS1_SCHPO : 105- 109: flhdh SsnGT flnfe CDS1_SCHPO : 106- 109: lhdhs Sn-GT flnfe DUN1_YEAST : 101- 105: nvidk SrnGT fingn FHL1_YEAST : 814- 818: dndle SesGT sssss FKH1_YEAST : 191- 195: mpkll StyGT ngnnn FKH2_YEAST : 164- 167: ppirl Ss-GT lldig FRAH_ANASP : 249- 253: iedvg SsnGT yinnl FRAH_ANASP : 250- 253: edvgs Sn-GT yinnl KAPP_ARATH : 249- 253: lvdmg SlnGT lvnsh KI67_HUMAN : 3005- 3009: ggkdg SvtGT krlrc MEK1_YEAST : 91- 95: yvkdc SlnGT ylngl MNF_MOUSE : 227- 231: vspip SptGT isvpn MNF_MOUSE : 529- 532: lasqg St-GT shdta SPK1_YEAST : 105- 109: llndi StnGT wlngq YHR5_YEAST : 241- 245: lkdvk SssGT flnhq YHR5_YEAST : 242- 245: kdvks Ss-GT flnhq YKI5_CAEEL : 89- 93: lvedi SenGT yindr YOT2_CAEEL : 438- 441: hldel Sa-GT kksrt C 3: 11.5102 35( 14) S-x(2,3)-A-x(1,2)-S Occurences: 35(14) CDS1_SCHPO : 372- 378: vmlta SipfAs-S sqakc CDS1_SCHPO : 372- 379: vmlta SipfAssS qakci DUN1_YEAST : 175- 182: qisat SsqnAttS aairk DUN1_YEAST : 176- 182: isats Sqn-AttS aairk FHL1_YEAST : 742- 749: pdrpp SqlsAsaS shpnn FHL1_YEAST : 745- 750: ppsql Sas-As-S hpnny FHL1_YEAST : 783- 789: narat SsvaAt-S vpaaa FHL1_YEAST : 783- 789: narat Ssv-AatS vpaaa FHL1_YEAST : 784- 789: arats Sva-At-S vpaaa FHL1_YEAST : 789- 795: svaat SvpaAa-S qnvda FHL1_YEAST : 789- 795: svaat Svp-AaaS qnvda FKH1_YEAST : 37- 43: vlsss SdpvAv-S sdysn FKH1_YEAST : 37- 44: vlsss SdpvAvsS dysns FKH1_YEAST : 440- 445: qkvkk Slq-At-S silge FKH1_YEAST : 440- 446: qkvkk Slq-AtsS ilges FKH2_YEAST : 589- 596: qmnrq SpnnAlvS ftnac FKH2_YEAST : 611- 617: iinni Sds-AdkS tnnng FKH2_YEAST : 664- 670: tgttt SslaAn-S lrlsq FKH2_YEAST : 664- 670: tgttt Ssl-AanS lrlsq FKH2_YEAST : 665- 670: gttts Sla-An-S lrlsq FKH2_YEAST : 702- 708: tperg SanrAr-S plhsn FRAH_ANASP : 220- 225: pdvdv Sgf-An-S eivsr KAPP_ARATH : 352- 357: dghgg Sga-Aq-S aikii KI67_HUMAN : 579- 584: qslvi Spp-Ap-S prktp KI67_HUMAN : 598- 605: dqrrr ScktApaS ssksq KI67_HUMAN : 707- 713: vhsqf StghAn-S pctii KI67_HUMAN : 3207- 3212: srktk Sqp-Aa-S tlesk MEK1_YEAST : 414- 419: qwdiv Sdn-Ak-S fvkdl MNF_MOUSE : 241- 247: nscpa SprgAg-S ssyrf MNF_MOUSE : 241- 248: nscpa SprgAgsS syrfv MNF_MOUSE : 272- 279: aakaa SeqqAdaS ggdsp MNF_MOUSE : 450- 456: peyry Sqs-ApgS pvsaq MNF_MOUSE : 574- 580: iqtva Sqm-ApgS prths SPK1_YEAST : 180- 185: spglt Sst-As-S mvank YHR5_YEAST : 19- 24: tppaa Sgi-At-S hdhtk YHR5_YEAST : 66- 71: lgilp Srt-At-S lvvan YHR5_YEAST : 343- 348: qaifi Spc-Ah-S whfhc YKI5_CAEEL : 580- 587: ridaq StpsAvvS alptp YKI5_CAEEL : 650- 655: lekig Spa-Aq-S vasvl YKI5_CAEEL : 719- 725: lsatp SstpAe-S skrkq YKI5_CAEEL : 719- 726: lsatp SstpAesS krkqk YKI5_CAEEL : 720- 725: satps Stp-Ae-S skrkq YKI5_CAEEL : 720- 726: satps Stp-AesS krkqk YOT2_CAEEL : 4- 10: mse Sdg-AfkS pslpp D 4: 11.5102 30( 14) P-x(4,5)-S-x(2,3)-A Occurences: 30(14) CDS1_SCHPO : 418- 427: mlein Pekri-SeseA lqhpw DUN1_YEAST : 169- 179: evfkk PqisatSsqnA ttsaa FHL1_YEAST : 320- 329: dvnlg Psksi-SrrhA qifyn FHL1_YEAST : 737- 746: qtphv Pdrpp-SqlsA sassh FHL1_YEAST : 740- 748: hvpdr Ppsql-Sas-A sshpn FKH1_YEAST : 105- 114: didlg Pakiv-SrkhA airfn FKH1_YEAST : 269- 279: rggir PntytsSsnnA vtngn FKH2_YEAST : 115- 124: nidlg Pakvv-SrkhA iikyn FKH2_YEAST : 590- 600: mnrqs PnnalvSftnA cansk FRAH_ANASP : 214- 223: pndri PpdvdvSgf-A nseiv FRAH_ANASP : 215- 223: ndrip Pdvdv-Sgf-A nseiv KAPP_ARATH : 489- 498: lgdkf Pkqqd-SrfsA epyis KI67_HUMAN : 294- 302: srksr Pksgg-Sgh-A vaepa KI67_HUMAN : 1424- 1433: htdkv PggedkSin-A freta KI67_HUMAN : 1666- 1675: hthte PtgdgkSmk-A fmesp KI67_HUMAN : 1753- 1762: ptssk Pqpkr-SlrkA dteee KI67_HUMAN : 2237- 2246: ptifk Pqskr-SlrkA dveee KI67_HUMAN : 2515- 2524: qthte PtgdskSik-A fkesp KI67_HUMAN : 2787- 2796: gsrrr PrapreSaq-A iedla MEK1_YEAST : 245- 254: fqdli PggdlfSyl-A kgdcl MNF_MOUSE : 235- 245: gtisv PnscpaSprgA gsssy MNF_MOUSE : 445- 453: klasv Peyry-Sqs-A pgspv MNF_MOUSE : 588- 598: thshh PtagytSdyrA aplpv SPK1_YEAST : 742- 751: qranq PsasssSms-A kkppv SPK1_YEAST : 742- 751: qranq Psass-SsmsA kkppv YHR5_YEAST : 65- 75: glgil PsrtatSlvvA nngsa YHR5_YEAST : 160- 170: sirlt PfidtsStsvA nqglf YKI5_CAEEL : 574- 584: rmsst PridaqStpsA vvsal YKI5_CAEEL : 596- 606: tpmns PlprvtSsksA qdvst YKI5_CAEEL : 598- 606: mnspl Prvts-Sks-A qdvst YOT2_CAEEL : 11- 19: gafks Pslpp-Shh-A papms E 5: 11.5102 34( 14) P-x(0,1)-S-x(1,2)-S Occurences: 34(14) CDS1_SCHPO : 444- 448: hehrt PpSs-S eheat CDS1_SCHPO : 445- 448: ehrtp P-Ss-S eheat DUN1_YEAST : 270- 274: dsfve PiSk-S qiqky FHL1_YEAST : 320- 323: dvnlg P-Sk-S isrrh FHL1_YEAST : 740- 745: hvpdr PpSqlS asass FHL1_YEAST : 741- 745: vpdrp P-SqlS asass FHL1_YEAST : 766- 770: pgsfd PsSl-S rffqp FHL1_YEAST : 766- 770: pgsfd P-SslS rffqp FKH1_YEAST : 233- 237: dhlht PlSs-S sdvnp FKH1_YEAST : 233- 238: dhlht PlSssS dvnpi FKH1_YEAST : 291- 295: phien P-SdlS ldenr FKH1_YEAST : 305- 310: ryikp PqSyaS mitqa FKH1_YEAST : 422- 426: geipa PeSs-S idprg FKH2_YEAST : 504- 509: skgnl PaSqqS qppvs FKH2_YEAST : 760- 763: nrrlt P-St-S ksqnv FRAH_ANASP : 198- 202: qeiel PpSl-S vvhig FRAH_ANASP : 199- 202: eielp P-Sl-S vvhig KAPP_ARATH : 22- 25: lllss P-Ss-S fsack KAPP_ARATH : 22- 27: lllss PsSsfS ackpw KAPP_ARATH : 104- 107: ykqrl P-Ss-S phfsq KI67_HUMAN : 21- 25: dgphf PlSl-S tclfg KI67_HUMAN : 294- 299: srksr PkSggS ghava KI67_HUMAN : 603- 607: sckta PaSs-S ksqte KI67_HUMAN : 800- 804: eepll PtSe-S fggnv KI67_HUMAN : 1114- 1118: fqtpg P-SeeS mtdek KI67_HUMAN : 1509- 1514: ptssk PqSkrS lrkvd KI67_HUMAN : 2237- 2242: ptifk PqSkrS lrkad MEK1_YEAST : 63- 66: lvltn P-Si-S svhcv MEK1_YEAST : 63- 67: lvltn P-SisS vhcvf MNF_MOUSE : 454- 459: ysqsa PgSpvS aqpvi SPK1_YEAST : 407- 411: ltghl PfSg-S tqdql SPK1_YEAST : 742- 745: qranq P-Sa-S sssms SPK1_YEAST : 742- 746: qranq P-SasS ssmsa YHR5_YEAST : 37- 41: npirl PiSi-S ltind YKI5_CAEEL : 218- 221: edtqm P-St-S qyfcs YKI5_CAEEL : 618- 622: sttpn PvSr-S pdpva YKI5_CAEEL : 661- 664: vasvl P-Sv-S nttss YOT2_CAEEL : 124- 127: llmeh P-Si-S ryhci YOT2_CAEEL : 546- 549: sqgpg P-St-S atlpa F 6: 11.5102 35( 14) P-x(0,1)-S-x(0,1)-S Occurences: 35(14) CDS1_SCHPO : 444- 447: hehrt PpS-S sehea CDS1_SCHPO : 444- 448: hehrt PpSsS eheat CDS1_SCHPO : 445- 447: ehrtp P-S-S sehea CDS1_SCHPO : 445- 448: ehrtp PsS-S eheat CDS1_SCHPO : 445- 448: ehrtp P-SsS eheat DUN1_YEAST : 27- 29: qrsnk P-S-S eytcl DUN1_YEAST : 270- 274: dsfve PiSkS qiqky FHL1_YEAST : 56- 59: ietkl PkS-S divte FHL1_YEAST : 320- 323: dvnlg P-SkS isrrh FHL1_YEAST : 766- 768: pgsfd P-S-S lsrff FHL1_YEAST : 766- 770: pgsfd PsSlS rffqp FKH1_YEAST : 233- 236: dhlht PlS-S ssdvn FKH1_YEAST : 233- 237: dhlht PlSsS sdvnp FKH1_YEAST : 422- 425: geipa PeS-S sidpr FKH1_YEAST : 422- 426: geipa PeSsS idprg FKH2_YEAST : 760- 763: nrrlt P-StS ksqnv FRAH_ANASP : 198- 202: qeiel PpSlS vvhig FRAH_ANASP : 199- 202: eielp P-SlS vvhig KAPP_ARATH : 22- 24: lllss P-S-S sfsac KAPP_ARATH : 22- 25: lllss PsS-S fsack KAPP_ARATH : 22- 25: lllss P-SsS fsack KAPP_ARATH : 104- 106: ykqrl P-S-S sphfs KAPP_ARATH : 104- 107: ykqrl PsS-S phfsq KAPP_ARATH : 104- 107: ykqrl P-SsS phfsq KI67_HUMAN : 21- 25: dgphf PlSlS tclfg KI67_HUMAN : 603- 606: sckta PaS-S sksqt KI67_HUMAN : 603- 607: sckta PaSsS ksqte KI67_HUMAN : 800- 804: eepll PtSeS fggnv KI67_HUMAN : 1504- 1507: dpvdt PtS-S kpqsk KI67_HUMAN : 1626- 1629: dldkn PaS-S krrlk KI67_HUMAN : 1748- 1751: dlvdt PtS-S kpqpk KI67_HUMAN : 1992- 1995: dpvkt PtS-S kqrlk MEK1_YEAST : 63- 66: lvltn P-SiS svhcv MNF_MOUSE : 395- 398: rtpfg PlS-S rrspa MNF_MOUSE : 413- 416: pglms PrS-S glqtp SPK1_YEAST : 407- 411: ltghl PfSgS tqdql SPK1_YEAST : 742- 745: qranq P-SaS sssms YHR5_YEAST : 7- 9: stntv P-S-S ppnqt YHR5_YEAST : 37- 41: npirl PiSiS ltind YKI5_CAEEL : 218- 221: edtqm P-StS qyfcs YKI5_CAEEL : 618- 622: sttpn PvSrS pdpva YKI5_CAEEL : 661- 664: vasvl P-SvS nttss YKI5_CAEEL : 718- 720: alsat P-S-S tpaes YOT2_CAEEL : 124- 127: llmeh P-SiS ryhci YOT2_CAEEL : 546- 549: sqgpg P-StS atlpa YOT2_CAEEL : 600- 602: pavde P-S-S vkdev G 7: 11.5102 40( 14) P-x(1,2)-S-x(0,1)-S Occurences: 40(14) CDS1_SCHPO : 374- 378: ltasi PfaS-S sqakc CDS1_SCHPO : 374- 379: ltasi PfaSsS qakci CDS1_SCHPO : 444- 447: hehrt Pp-S-S sehea CDS1_SCHPO : 444- 448: hehrt PpsS-S eheat CDS1_SCHPO : 444- 448: hehrt Pp-SsS eheat CDS1_SCHPO : 445- 448: ehrtp Ps-S-S eheat DUN1_YEAST : 270- 274: dsfve Pi-SkS qiqky FHL1_YEAST : 56- 59: ietkl Pk-S-S divte FHL1_YEAST : 320- 325: dvnlg PskSiS rrhaq FHL1_YEAST : 462- 467: eyrtk PtvSyS amltt FHL1_YEAST : 766- 770: pgsfd Ps-SlS rffqp FKH1_YEAST : 233- 236: dhlht Pl-S-S ssdvn FKH1_YEAST : 233- 237: dhlht PlsS-S sdvnp FKH1_YEAST : 233- 237: dhlht Pl-SsS sdvnp FKH1_YEAST : 233- 238: dhlht PlsSsS dvnpi FKH1_YEAST : 320- 325: ailst PegSiS ladiy FKH1_YEAST : 422- 425: geipa Pe-S-S sidpr FKH1_YEAST : 422- 426: geipa PesS-S idprg FKH1_YEAST : 422- 426: geipa Pe-SsS idprg FKH2_YEAST : 578- 583: eslhp PaiSiS qmnrq FKH2_YEAST : 629- 634: tkmnl PaiStS slden FKH2_YEAST : 709- 714: nrars PlhSnS nntnn FKH2_YEAST : 760- 765: nrrlt PstSkS qnvks FRAH_ANASP : 198- 202: qeiel Pp-SlS vvhig KAPP_ARATH : 22- 25: lllss Ps-S-S fsack KAPP_ARATH : 22- 27: lllss PssSfS ackpw KAPP_ARATH : 104- 107: ykqrl Ps-S-S phfsq KI67_HUMAN : 21- 25: dgphf Pl-SlS tclfg KI67_HUMAN : 479- 483: mcsgl PglS-S vdinn KI67_HUMAN : 603- 606: sckta Pa-S-S sksqt KI67_HUMAN : 603- 607: sckta PasS-S ksqte KI67_HUMAN : 603- 607: sckta Pa-SsS ksqte KI67_HUMAN : 800- 804: eepll Pt-SeS fggnv KI67_HUMAN : 888- 893: niqkl PveSkS eetnt KI67_HUMAN : 1372- 1376: kttkm PceS-S ppesa KI67_HUMAN : 1504- 1507: dpvdt Pt-S-S kpqsk KI67_HUMAN : 1626- 1629: dldkn Pa-S-S krrlk KI67_HUMAN : 1748- 1751: dlvdt Pt-S-S kpqpk KI67_HUMAN : 1992- 1995: dpvkt Pt-S-S kqrlk KI67_HUMAN : 2824- 2828: kttki PckS-S peled KI67_HUMAN : 2980- 2985: vstrd PvkSqS ksnts MEK1_YEAST : 63- 67: lvltn PsiS-S vhcvf MNF_MOUSE : 395- 398: rtpfg Pl-S-S rrspa MNF_MOUSE : 413- 416: pglms Pr-S-S glqtp SPK1_YEAST : 407- 411: ltghl Pf-SgS tqdql SPK1_YEAST : 470- 475: wikms PlgSqS ygdfs SPK1_YEAST : 742- 746: qranq PsaS-S ssmsa SPK1_YEAST : 742- 747: qranq PsaSsS smsak YHR5_YEAST : 37- 41: npirl Pi-SiS ltind YKI5_CAEEL : 618- 622: sttpn Pv-SrS pdpva YKI5_CAEEL : 722- 726: tpsst PaeS-S krkqk YOT2_CAEEL : 544- 549: tpsqg PgpStS atlpa H 8: 11.0102 26( 14) S-x(0,2)-L-x(3,4)-L Occurences: 26(14) CDS1_SCHPO : 360- 365: kvdiw S--Lgcv-L yvmlt DUN1_YEAST : 305- 312: lrqde SkaLfkq-L ltglk DUN1_YEAST : 305- 313: lrqde SkaLfkqlL tglky DUN1_YEAST : 422- 430: gfppf SdqLgppsL keqil DUN1_YEAST : 429- 435: qlgpp S--LkeqiL qakya DUN1_YEAST : 488- 496: iqqqs SvsLelqrL qitdn DUN1_YEAST : 490- 496: qqssv S--LelqrL qitdn FHL1_YEAST : 931- 936: tevnv S--Leek-L FKH1_YEAST : 210- 218: niieg StyLreqrL qeear FKH2_YEAST : 664- 671: tgttt Ss-LaansL rlsqp FKH2_YEAST : 665- 671: gttts S--LaansL rlsqp FRAH_ANASP : 275- 281: pgdri S--LgkgdL vtflf KAPP_ARATH : 204- 211: vnsts SskLpvk-L grvsp KAPP_ARATH : 205- 211: nstss Sk-Lpvk-L grvsp KAPP_ARATH : 249- 254: lvdmg S--Lngt-L vnshs KI67_HUMAN : 23- 28: phfpl S--Lstc-L fgrgi KI67_HUMAN : 969- 975: ltdlk S--LpdteL mkdta MEK1_YEAST : 91- 97: yvkdc S--LngtyL nglll MEK1_YEAST : 142- 148: nddlq Ss-Ldpk-L ldqmg MEK1_YEAST : 142- 149: nddlq Ss-LdpklL dqmgf MEK1_YEAST : 143- 148: ddlqs S--Ldpk-L ldqmg MEK1_YEAST : 143- 149: ddlqs S--LdpklL dqmgf MNF_MOUSE : 117- 124: nssqg SvdLsmg-L ssfis SPK1_YEAST : 483- 488: dfsqi S--Lsqs-L sqqkl SPK1_YEAST : 485- 493: sqisl SqsLsqqkL lenmd SPK1_YEAST : 487- 493: islsq S--LsqqkL lenmd YHR5_YEAST : 124- 129: nqtef S--Ldih-L ppnts YKI5_CAEEL : 252- 259: rtsrh Sp-LyrkkL aeqaq YOT2_CAEEL : 415- 420: tdtye S--Lcrk-L eeskk I 9: 11.0102 19( 14) I-x(0,2)-S-x(2,3)-G Occurences: 19(14) CDS1_SCHPO : 310- 314: dfhlk I--Sdf-G lakvi CDS1_SCHPO : 402- 406: llene I--See-G idlin DUN1_YEAST : 98- 104: nlinv IdkSrn-G tfing FHL1_YEAST : 8- 15: gemai IesSnhvG tsspt FKH1_YEAST : 316- 322: mitqa Il-StpeG sisla FKH2_YEAST : 353- 359: mitqa IlsSpe-G visla FKH2_YEAST : 353- 359: mitqa Il-SspeG visla FRAH_ANASP : 274- 279: rpgdr I--SlgkG dlvtf KAPP_ARATH : 58- 62: lqrpl I--Sdd-G nliqg KI67_HUMAN : 10- 17: rrlvt IkrSgvdG phfpl MEK1_YEAST : 382- 387: imltg I--SpfyG dgser MNF_MOUSE : 225- 230: slvsp Ip-Spt-G tisvp SPK1_YEAST : 104- 108: lllnd I--Stn-G twlng SPK1_YEAST : 466- 472: lnhpw IkmSpl-G sqsyg YHR5_YEAST : 219- 224: fkskv I--SrthG cfkvd YKI5_CAEEL : 32- 37: erkrt Ii-Slq-G gksfg YKI5_CAEEL : 32- 38: erkrt Ii-SlqgG ksfgr YKI5_CAEEL : 33- 37: rkrti I--Slq-G gksfg YKI5_CAEEL : 33- 38: rkrti I--SlqgG ksfgr YKI5_CAEEL : 88- 92: ylved I--Sen-G tyind YKI5_CAEEL : 373- 377: saftv I--Sts-G vlcpt YOT2_CAEEL : 667- 674: diekk IagSedyG agved J 10: 11.0102 20( 14) L-x(1,2)-P-x(1,3)-I Occurences: 20(14) CDS1_SCHPO : 134- 141: eirig LgvPkdeI sflcq DUN1_YEAST : 68- 73: scdvi LsePd--I stfha FHL1_YEAST : 318- 324: kvdvn Lg-PsksI srrha FKH1_YEAST : 103- 108: nidid Lg-Pak-I vsrkh FKH1_YEAST : 317- 324: itqai LstPegsI sladi FKH2_YEAST : 195- 200: icieh Lm-Pnl-I nmfgl FKH2_YEAST : 354- 361: itqai LssPegvI sladi FKH2_YEAST : 575- 580: eykes LhpPa--I sisqm FKH2_YEAST : 575- 580: eykes Lh-Ppa-I sisqm FKH2_YEAST : 575- 582: eykes LhpPaisI sqmnr FRAH_ANASP : 268- 274: gnrhr Lr-PgdrI slgkg KAPP_ARATH : 53- 58: fkvgd LqrPl--I sddgn KI67_HUMAN : 1010- 1015: mpcqs Lq-Pep-I ntpth MEK1_YEAST : 60- 65: ecqlv LtnPs--I ssvhc MEK1_YEAST : 218- 223: rillr LdhPn--I ikvyh MEK1_YEAST : 218- 224: rillr LdhPni-I kvyht MNF_MOUSE : 202- 206: splrp Ly-Pq--I splki SPK1_YEAST : 251- 256: evlqk LnhPr--I vrlkg SPK1_YEAST : 320- 325: ishrd Lk-Pdn-I lieqd SPK1_YEAST : 461- 466: taaka LnhPw--I kmspl YHR5_YEAST : 158- 162: lfsir Lt-Pf--I dtsst YKI5_CAEEL : 60- 65: tehve Le-Pqf-I srcha YOT2_CAEEL : 165- 171: mnkkr Lp-PkqyI rtrvg K 11: 11.0102 21( 14) L-x(3,4)-N-x(2,4)-L Occurences: 21(14) CDS1_SCHPO : 341- 348: lapev Lksk-Nvn--L dggyd DUN1_YEAST : 454- 463: iddsv LhlisNllv-L npder FHL1_YEAST : 117- 124: kndea Lfns-Nel--L shtmd FHL1_YEAST : 214- 222: etlpt LvdekNnm--L hmrnn FHL1_YEAST : 674- 682: nplta Lmdk-Npqh-L nlila FKH1_YEAST : 388- 396: vrrdf Lnkw-Nagk-L skirr FKH2_YEAST : 205- 212: inmfg Legn-Nnp--L lrdii FKH2_YEAST : 205- 213: inmfg LegnnNpl--L rdiik FKH2_YEAST : 205- 213: inmfg Legn-Nnpl-L rdiik FKH2_YEAST : 554- 563: iktpq Lqap-NsnanL nqnnm FRAH_ANASP : 85- 93: dplle Llqp-Nalg-L dpvan FRAH_ANASP : 260- 268: innlp Llpg-Nrhr-L rpgdr KAPP_ARATH : 334- 342: hykwp Lpga-Nkfg-L fcvcd KAPP_ARATH : 475- 484: dgetr Lfgi-NlarmL gdkfp KI67_HUMAN : 1812- 1819: dqpgn Lpgs-Nrr--L qtrke MEK1_YEAST : 132- 140: ikktr LvfmiNdd--L qssld MEK1_YEAST : 291- 298: ivhrd Lkld-Nil--L ctpep MNF_MOUSE : 542- 551: agtav Ldlg-NeaagL eekpt SPK1_YEAST : 93- 101: hfqil LgedgNll--L ndist YHR5_YEAST : 309- 318: fnkea LsrikNlqk-L ttgle YKI5_CAEEL : 296- 303: vayen Lvtk-Nek--L eiigt YKI5_CAEEL : 589- 597: avvsa LptpmNsp--L prvts YOT2_CAEEL : 354- 361: dtynv Lrks-Ntk--L rmqrk L 12: 11.0102 23( 14) N-x(2,3)-L-x(1,3)-R Occurences: 23(14) CDS1_SCHPO : 107- 115: hdhss NgtfLnfeR lakns DUN1_YEAST : 333- 340: dikpe Nil-LnitR renps FHL1_YEAST : 219- 225: lvdek Nnm-Lhm-R nnsit FKH1_YEAST : 198- 204: ygtng NnnpLl--R niieg FKH1_YEAST : 199- 204: gtngn Nnp-Ll--R niieg FKH1_YEAST : 392- 400: flnkw NagkLskiR rgasv FKH2_YEAST : 208- 214: fgleg NnnpLl--R diikq FKH2_YEAST : 209- 214: glegn Nnp-Ll--R diikq FKH2_YEAST : 542- 547: dtqnr Nia-La--R piktp FRAH_ANASP : 257- 265: gtyin NlplLpgnR hrlrp KAPP_ARATH : 556- 563: aekia Ngl-LneaR amrtk KI67_HUMAN : 99- 106: sfrye Nes-LqngR kstef KI67_HUMAN : 524- 529: enlpp Ntp-Lk--R geapt KI67_HUMAN : 1816- 1822: nlpgs Nrr-Lqt-R kekaq KI67_HUMAN : 3152- 3160: dkvte NkrcLrsaR qness MEK1_YEAST : 98- 104: ngtyl NgllLk--R dktyl MEK1_YEAST : 98- 104: ngtyl Ngl-Llk-R dktyl MNF_MOUSE : 340- 345: nsirh Nls-Ln--R yfikv SPK1_YEAST : 655- 663: chtgt NvsyLnnnR miqgt YHR5_YEAST : 132- 138: ihlpp Nts-Lpe-R idqst YHR5_YEAST : 305- 311: kanaf NkeaLs--R iknlq YHR5_YEAST : 407- 413: idmei Nnn-Lgv-R lvd YKI5_CAEEL : 594- 599: lptpm Nsp-Lp--R vtssk YOT2_CAEEL : 358- 365: vlrks Ntk-LrmqR ktlea M 13: 11.0102 30( 14) N-x(4,5)-N-x(2,4)-L Occurences: 30(14) CDS1_SCHPO : 107- 116: hdhss Ngtfl-Nfer-L aknsr CDS1_SCHPO : 299- 308: dikpe Nilit-Ndfh-L kisdf DUN1_YEAST : 103- 112: idksr Ngtfi-Ngnr-L vkkdy DUN1_YEAST : 464- 475: nllvl NpderyNideaL nhpwf FHL1_YEAST : 81- 90: eneve NpvtddNgn--L klelp FHL1_YEAST : 81- 92: eneve NpvtddNgnlkL elpdn FHL1_YEAST : 113- 123: efdak NdealfNsne-L lshtm FHL1_YEAST : 113- 124: efdak NdealfNsnelL shtmd FHL1_YEAST : 590- 600: qrsnv Narkq-NisqtL aanra FHL1_YEAST : 663- 674: tqaak NkgitgNpltaL mdknp FHL1_YEAST : 678- 686: almdk Npqhl-Nli--L aaavn FKH1_YEAST : 284- 294: avtng NvphieNpsd-L slden FKH1_YEAST : 349- 357: qmawq Nsvrh-Nls--L nkafe FKH1_YEAST : 475- 483: mdvtt Nanvn-Nss--L s FKH2_YEAST : 88- 96: vsigr Ntdpl-Nsa--L qensd FKH2_YEAST : 105- 113: sdgvk Nsyrv-Nid--L gpakv FKH2_YEAST : 386- 394: ksgwq Nsirh-Nls--L nkafe FKH2_YEAST : 586- 594: sisqm Nrqsp-Nna--L vsftn FKH2_YEAST : 718- 727: nsnnt NnnganNsn--L qtsgm FKH2_YEAST : 718- 727: nsnnt Nnnga-Nnsn-L qtsgm FKH2_YEAST : 719- 727: snntn Nngan-Nsn--L qtsgm FRAH_ANASP : 251- 260: dvgss NgtyinNlp--L lpgnr FRAH_ANASP : 251- 260: dvgss Ngtyi-Nnlp-L lpgnr FRAH_ANASP : 251- 261: dvgss NgtyinNlpl-L pgnrh FRAH_ANASP : 251- 261: dvgss Ngtyi-NnlplL pgnrh KAPP_ARATH : 153- 163: tydwq Nnrne-NlqynL ekdrl KI67_HUMAN : 1811- 1819: ldqpg Nlpgs-Nrr--L qtrke MEK1_YEAST : 93- 101: kdcsl Ngtyl-Ngl--L lkrdk MEK1_YEAST : 93- 102: kdcsl Ngtyl-Ngll-L krdkt MNF_MOUSE : 335- 343: dkgwq Nsirh-Nls--L nryfi SPK1_YEAST : 102- 111: gnlll Ndist-Ngtw-L ngqkv SPK1_YEAST : 760- 768: pvsdt Nnngn-Nsv--L ndlve YHR5_YEAST : 53- 64: pnnns NnnsvsNglgiL psrta YHR5_YEAST : 54- 64: nnnsn Nnsvs-NglgiL psrta YKI5_CAEEL : 91- 100: edise Ngtyi-Ndrr-L skdkr YKI5_CAEEL : 295- 303: nvaye Nlvtk-Nek--L eiigt YOT2_CAEEL : 352- 361: ildty NvlrksNtk--L rmqrk N 14: 11.0102 46( 14) S-x(0,2)-S-x(4,5)-I Occurences: 46(14) CDS1_SCHPO : 152- 160: vpvkh SrdSqknm-I ksens CDS1_SCHPO : 162- 170: knmik SenShyei-I rtlgs CDS1_SCHPO : 377- 384: sipfa Ss-Sqakc-I elisk CDS1_SCHPO : 377- 384: sipfa S--SsqakcI elisk CDS1_SCHPO : 378- 384: ipfas S--Sqakc-I elisk DUN1_YEAST : 139- 145: lfkya S--Ssstd-I endde FHL1_YEAST : 145- 152: hsrev S--SkedinI epvnp FHL1_YEAST : 323- 331: lgpsk Si-SrrhaqI fynfg FHL1_YEAST : 391- 399: erndd Sk-SpenadI aesei FHL1_YEAST : 484- 492: takgm Sl-SeiyagI relfp FHL1_YEAST : 895- 902: skden S--SndnreI sktde FKH1_YEAST : 44- 52: pvavs SdySnsls-I arevn FKH1_YEAST : 122- 129: rfnle Sg-Swelq-I fgrng FKH1_YEAST : 235- 243: lhtpl SssSdvnp-I gdphg FKH1_YEAST : 235- 243: lhtpl Ss-SsdvnpI gdphg FKH1_YEAST : 236- 243: htpls Ss-Sdvnp-I gdphg FKH1_YEAST : 236- 243: htpls S--SsdvnpI gdphg FKH1_YEAST : 237- 243: tplss S--Sdvnp-I gdphg FKH1_YEAST : 307- 316: ikppq SyaSmitqaI lstpe FKH1_YEAST : 424- 432: ipape Ss-SidprgI kaqkv FKH1_YEAST : 425- 432: papes S--SidprgI kaqkv FKH2_YEAST : 164- 171: ppirl S--SgtlldI ggtqm FKH2_YEAST : 355- 361: tqail S--Spegv-I sladi FRAH_ANASP : 249- 255: iedvg S--Sngty-I nnlpl KAPP_ARATH : 224- 233: lalkd SevSgkhaqI twnst KAPP_ARATH : 295- 302: vyvri S--SqnefqI pfkig KAPP_ARATH : 494- 502: pkqqd SrfSaepy-I seplr KI67_HUMAN : 419- 426: kpenl S--SktrgsI ptdve KI67_HUMAN : 630- 638: lqkrv Si-SrsqhdI lqmic KI67_HUMAN : 648- 656: cskrr SgaSeanl-I vaksw KI67_HUMAN : 875- 884: stvnr SgrStefrnI qklpv KI67_HUMAN : 1994- 2001: vktpt S--SkqrlkI slgkv KI67_HUMAN : 2475- 2484: esfkt SrsSkqrlkI plvkv KI67_HUMAN : 2477- 2484: fktsr S--SkqrlkI plvkv KI67_HUMAN : 3041- 3047: rargk S--Sepvv-I mkrsl MEK1_YEAST : 119- 127: dviel SqgSeend-I kktrl MNF_MOUSE : 456- 464: qsapg SpvSaqpv-I mavpp MNF_MOUSE : 515- 523: rvvtt SanSangy-I lasqg SPK1_YEAST : 82- 91: hlgni SrlSnkhfqI llged SPK1_YEAST : 789- 797: lkrih Sv-SlsqsqI dpskk YHR5_YEAST : 56- 63: nsnnn Sv-Snglg-I lpsrt YKI5_CAEEL : 219- 227: dtqmp St-SqyfcsI pkktp YKI5_CAEEL : 365- 373: ndfti SasSaftv-I stsgv YKI5_CAEEL : 365- 373: ndfti Sa-SsaftvI stsgv YKI5_CAEEL : 367- 373: ftisa S--Saftv-I stsgv YKI5_CAEEL : 403- 410: ksini S--SeksrkI adelk YKI5_CAEEL : 634- 642: vkdsv SseStvsg-I vslek YKI5_CAEEL : 635- 642: kdsvs Se-Stvsg-I vslek YOT2_CAEEL : 125- 132: lmehp Si-Sryhc-I lqygn YOT2_CAEEL : 330- 338: asatv St-SkkdaqI qcald O 15: 11.0102 34( 14) S-x(0,2)-S-x(3,4)-I Occurences: 34(14) CDS1_SCHPO : 152- 160: vpvkh SrdSqknmI ksens CDS1_SCHPO : 162- 169: knmik SenShye-I irtlg CDS1_SCHPO : 162- 170: knmik SenShyeiI rtlgs CDS1_SCHPO : 377- 384: sipfa Ss-SqakcI elisk CDS1_SCHPO : 378- 384: ipfas S--SqakcI elisk DUN1_YEAST : 61- 67: ttigr Sr-Scdv-I lsepd DUN1_YEAST : 139- 145: lfkya Ss-Sstd-I endde DUN1_YEAST : 139- 145: lfkya S--SsstdI endde DUN1_YEAST : 140- 145: fkyas S--Sstd-I endde FHL1_YEAST : 44- 51: esitn SptSevp-I etklp FHL1_YEAST : 145- 150: hsrev S--Sked-I niepv FKH1_YEAST : 44- 52: pvavs SdySnslsI arevn FKH1_YEAST : 122- 129: rfnle Sg-SwelqI fgrng FKH1_YEAST : 235- 243: lhtpl SssSdvnpI gdphg FKH1_YEAST : 236- 243: htpls Ss-SdvnpI gdphg FKH1_YEAST : 237- 243: tplss S--SdvnpI gdphg FKH1_YEAST : 323- 329: stpeg Si-Slad-I ykfis FKH2_YEAST : 355- 361: tqail S--SpegvI sladi FRAH_ANASP : 200- 206: ielpp Sl-Svvh-I gkpnd FRAH_ANASP : 249- 255: iedvg S--SngtyI nnlpl KAPP_ARATH : 494- 502: pkqqd SrfSaepyI seplr KAPP_ARATH : 549- 554: ergre S--Saek-I angll KI67_HUMAN : 632- 638: krvsi Sr-Sqhd-I lqmic KI67_HUMAN : 648- 656: cskrr SgaSeanlI vaksw KI67_HUMAN : 3041- 3047: rargk S--SepvvI mkrsl MEK1_YEAST : 119- 127: dviel SqgSeendI kktrl MNF_MOUSE : 456- 464: qsapg SpvSaqpvI mavpp MNF_MOUSE : 515- 523: rvvtt SanSangyI lasqg SPK1_YEAST : 791- 797: rihsv Sl-Sqsq-I dpskk YHR5_YEAST : 56- 63: nsnnn Sv-SnglgI lpsrt YKI5_CAEEL : 365- 373: ndfti SasSaftvI stsgv YKI5_CAEEL : 367- 373: ftisa S--SaftvI stsgv YKI5_CAEEL : 571- 576: knvrm S--Stpr-I daqst YKI5_CAEEL : 634- 642: vkdsv SseStvsgI vslek YKI5_CAEEL : 635- 642: kdsvs Se-StvsgI vslek YOT2_CAEEL : 125- 132: lmehp Si-SryhcI lqygn P 16: 11.0102 17( 14) S-x(2,3)-G-x(3,5)-N Occurences: 17(14) CDS1_SCHPO : 105- 112: flhdh Ssn-Gtfl--N ferla CDS1_SCHPO : 403- 411: lenei See-Gidli-N rmlei DUN1_YEAST : 101- 108: nvidk Srn-Gtfi--N gnrlv DUN1_YEAST : 101- 110: nvidk Srn-GtfingN rlvkk FHL1_YEAST : 840- 847: gsddg Sas-Gsgd--N sstss FKH1_YEAST : 191- 198: mpkll Sty-Gtng--N nnpll FKH1_YEAST : 191- 199: mpkll Sty-Gtngn-N npllr FKH1_YEAST : 191- 200: mpkll Sty-GtngnnN pllrn FKH2_YEAST : 257- 264: anlgp Seq-Gifn--N nnnsk FKH2_YEAST : 257- 265: anlgp Seq-Gifnn-N nnskn FKH2_YEAST : 257- 266: anlgp Seq-GifnnnN nsknk FRAH_ANASP : 249- 256: iedvg Ssn-Gtyi--N nlpll FRAH_ANASP : 249- 257: iedvg Ssn-Gtyin-N lpllp KAPP_ARATH : 249- 256: lvdmg Sln-Gtlv--N shsis KI67_HUMAN : 185- 194: tnvhs SehaGrngr-N aadpi MEK1_YEAST : 91- 98: yvkdc Sln-Gtyl--N glllk MNF_MOUSE : 227- 236: vspip Spt-GtisvpN scpas SPK1_YEAST : 105- 112: llndi Stn-Gtwl--N gqkve YHR5_YEAST : 241- 248: lkdvk Sss-Gtfl--N hqrls YKI5_CAEEL : 89- 96: lvedi Sen-Gtyi--N drrls YKI5_CAEEL : 192- 201: qqead StngGpeme-N nrass YKI5_CAEEL : 192- 201: qqead Stn-GgpemeN nrass YKI5_CAEEL : 192- 202: qqead StngGpemenN rassa YKI5_CAEEL : 506- 514: dderh SassGste--N nyrrr YKI5_CAEEL : 506- 515: dderh SassGsten-N yrrrt YOT2_CAEEL : 154- 161: ifelg Sth-Gsrm--N kkrlp Q 17: 11.0102 32( 14) S-x(3,4)-A-x(3,5)-L Occurences: 32(14) CDS1_SCHPO : 175- 183: irtlg Sgtf-Avvk--L avevn CDS1_SCHPO : 377- 386: sipfa Sssq-Akcie-L iskga CDS1_SCHPO : 447- 456: rtpps SseheAteq--L nsss CDS1_SCHPO : 448- 456: tppss Sehe-Ateq--L nsss DUN1_YEAST : 74- 82: sepdi Stfh-Aefh--L lqmdv DUN1_YEAST : 74- 83: sepdi Stfh-Aefhl-L qmdvd FHL1_YEAST : 264- 273: tqrkl SepidAslp--L pneqp FHL1_YEAST : 486- 495: kgmsl Seiy-Agire-L fpyyk FKH1_YEAST : 15- 25: fsgky Ssyt-AqdrqgL vnavt FKH1_YEAST : 110- 120: pakiv SrkhaAirfn-L esgsw FKH1_YEAST : 110- 120: pakiv Srkh-AairfnL esgsw FKH2_YEAST : 664- 673: tgttt Ssla-Anslr-L sqpyd FKH2_YEAST : 702- 710: tperg Sanr-Arsp--L hsnsn FKH2_YEAST : 841- 850: knqgg Stan-Akeli-L dtdga FRAH_ANASP : 229- 237: nseiv Srvh-Adir--L egdah KAPP_ARATH : 381- 389: kekvl Skrd-Asdv--L rdmfa KAPP_ARATH : 529- 538: lwdvv Spkk-Avqlv-L qmrdk KAPP_ARATH : 550- 559: rgres SaekiAngl--L neara KI67_HUMAN : 330- 339: svqtp SkavgAsfp--L yepak KI67_HUMAN : 380- 390: vnlgk SegfkAgdkt-L tprkl KI67_HUMAN : 821- 830: aakqp SdkcsAspp--L rrqci KI67_HUMAN : 1098- 1108: keeaq SledlAgfke-L fqtpg KI67_HUMAN : 1272- 1282: qrpkr Sirk-AdvegeL lacrn KI67_HUMAN : 2072- 2082: keeaq SledlAgfke-L fqtpd MEK1_YEAST : 393- 403: dgser SiiqnAkigk-L nfklk MNF_MOUSE : 8- 16: evged Sgar-Alla--L rsapc MNF_MOUSE : 515- 524: rvvtt Sans-Angyi-L asqgs MNF_MOUSE : 533- 542: gstgt Shdt-Agtav-L dlgne SPK1_YEAST : 774- 784: ndlve Spin-AntgniL krihs YHR5_YEAST : 165- 174: pfidt SstsvAnqg--L ffdpi YHR5_YEAST : 166- 174: fidts Stsv-Anqg--L ffdpi YKI5_CAEEL : 580- 589: ridaq Stps-Avvsa-L ptpmn YOT2_CAEEL : 2- 13: m SesdgAfkspsL ppshh YOT2_CAEEL : 332- 342: atvst Skkd-AqiqcaL dacri R 18: 11.0102 39( 14) S-x(2,3)-A-x(3,5)-L Occurences: 39(14) CDS1_SCHPO : 175- 183: irtlg SgtfAvvk--L avevn CDS1_SCHPO : 377- 386: sipfa SssqAkcie-L iskga CDS1_SCHPO : 378- 386: ipfas Ssq-Akcie-L iskga CDS1_SCHPO : 388- 397: cieli Skg-AypiepL lenei CDS1_SCHPO : 448- 456: tppss SeheAteq--L nsss DUN1_YEAST : 74- 82: sepdi StfhAefh--L lqmdv DUN1_YEAST : 74- 83: sepdi StfhAefhl-L qmdvd DUN1_YEAST : 386- 393: lcgtp Syv-Apev--L tkkgy FHL1_YEAST : 486- 495: kgmsl SeiyAgire-L fpyyk FKH1_YEAST : 15- 25: fsgky SsytAqdrqgL vnavt FKH1_YEAST : 16- 25: sgkys Syt-AqdrqgL vnavt FKH1_YEAST : 110- 120: pakiv SrkhAairfnL esgsw FKH1_YEAST : 440- 448: qkvkk Slq-Atssi-L gesap FKH2_YEAST : 220- 228: diikq Sny-Akqrq-L tsnqq FKH2_YEAST : 317- 325: vdsyk Ssn-Aypqa-L dftsd FKH2_YEAST : 440- 448: kirrg Ssv-Arqlq-L hmakf FKH2_YEAST : 664- 671: tgttt Ssl-Aans--L rlsqp FKH2_YEAST : 664- 673: tgttt SslaAnslr-L sqpyd FKH2_YEAST : 664- 673: tgttt Ssl-AanslrL sqpyd FKH2_YEAST : 665- 673: gttts Sla-Anslr-L sqpyd FKH2_YEAST : 702- 710: tperg SanrArsp--L hsnsn FKH2_YEAST : 841- 850: knqgg StanAkeli-L dtdga FRAH_ANASP : 229- 237: nseiv SrvhAdir--L egdah KAPP_ARATH : 125- 134: visep Sdn-AlvgqtL klpae KAPP_ARATH : 381- 389: kekvl SkrdAsdv--L rdmfa KAPP_ARATH : 529- 538: lwdvv SpkkAvqlv-L qmrdk KI67_HUMAN : 1272- 1282: qrpkr SirkAdvegeL lacrn KI67_HUMAN : 1736- 1744: kttkv Syr-Asqpd-L vdtpt KI67_HUMAN : 2793- 2800: rapre Saq-Aied--L agfkd KI67_HUMAN : 3207- 3214: srktk Sqp-Aast--L esksv MEK1_YEAST : 251- 259: ggdlf Syl-Akgdc-L tsmse MNF_MOUSE : 8- 16: evged SgarAlla--L rsapc MNF_MOUSE : 515- 524: rvvtt SansAngyi-L asqgs MNF_MOUSE : 533- 542: gstgt ShdtAgtav-L dlgne SPK1_YEAST : 11- 19: qptqq Stq-Atqrf-L iekfs SPK1_YEAST : 171- 178: nlknt Ski-Aspg--L tssta SPK1_YEAST : 774- 784: ndlve SpinAntgniL krihs YHR5_YEAST : 166- 174: fidts StsvAnqg--L ffdpi YKI5_CAEEL : 580- 589: ridaq StpsAvvsa-L ptpmn YKI5_CAEEL : 922- 929: cgshp Ske-Akda--L agrvy YOT2_CAEEL : 4- 13: mse Sdg-AfkspsL ppshh YOT2_CAEEL : 332- 342: atvst SkkdAqiqcaL dacri S 19: 11.0102 36( 14) S-x(2,3)-A-x(2,4)-L Occurences: 36(14) CDS1_SCHPO : 175- 183: irtlg SgtfAvvk-L avevn CDS1_SCHPO : 377- 386: sipfa SssqAkcieL iskga CDS1_SCHPO : 378- 386: ipfas Ssq-AkcieL iskga CDS1_SCHPO : 448- 456: tppss SeheAteq-L nsss DUN1_YEAST : 74- 82: sepdi StfhAefh-L lqmdv DUN1_YEAST : 74- 83: sepdi StfhAefhlL qmdvd DUN1_YEAST : 386- 393: lcgtp Syv-Apev-L tkkgy FHL1_YEAST : 486- 495: kgmsl SeiyAgireL fpyyk FKH1_YEAST : 440- 448: qkvkk Slq-AtssiL gesap FKH2_YEAST : 220- 228: diikq Sny-AkqrqL tsnqq FKH2_YEAST : 317- 325: vdsyk Ssn-AypqaL dftsd FKH2_YEAST : 440- 446: kirrg Ssv-Arq--L qlhma FKH2_YEAST : 440- 448: kirrg Ssv-ArqlqL hmakf FKH2_YEAST : 664- 671: tgttt SslaAns--L rlsqp FKH2_YEAST : 664- 671: tgttt Ssl-Aans-L rlsqp FKH2_YEAST : 664- 673: tgttt SslaAnslrL sqpyd FKH2_YEAST : 665- 671: gttts Sla-Ans--L rlsqp FKH2_YEAST : 665- 673: gttts Sla-AnslrL sqpyd FKH2_YEAST : 702- 710: tperg SanrArsp-L hsnsn FKH2_YEAST : 841- 848: knqgg StanAke--L ildtd FKH2_YEAST : 841- 850: knqgg StanAkeliL dtdga FRAH_ANASP : 229- 237: nseiv SrvhAdir-L egdah KAPP_ARATH : 381- 389: kekvl SkrdAsdv-L rdmfa KAPP_ARATH : 529- 536: lwdvv SpkkAvq--L vlqmr KAPP_ARATH : 529- 538: lwdvv SpkkAvqlvL qmrdk KI67_HUMAN : 1736- 1744: kttkv Syr-AsqpdL vdtpt KI67_HUMAN : 2793- 2800: rapre Saq-Aied-L agfkd KI67_HUMAN : 3207- 3214: srktk SqpaAst--L esksv KI67_HUMAN : 3207- 3214: srktk Sqp-Aast-L esksv MEK1_YEAST : 251- 259: ggdlf Syl-AkgdcL tsmse MEK1_YEAST : 350- 357: rkayq SfsrAat--L eqrgy MNF_MOUSE : 8- 16: evged SgarAlla-L rsapc MNF_MOUSE : 515- 524: rvvtt SansAngyiL asqgs MNF_MOUSE : 533- 542: gstgt ShdtAgtavL dlgne MNF_MOUSE : 594- 601: tagyt SdyrAap--L pvrav SPK1_YEAST : 11- 19: qptqq Stq-AtqrfL iekfs SPK1_YEAST : 171- 178: nlknt Ski-Aspg-L tssta SPK1_YEAST : 455- 461: dpnnr Sta-Aka--L nhpwi YHR5_YEAST : 66- 72: lgilp Srt-Ats--L vvann YHR5_YEAST : 166- 174: fidts StsvAnqg-L ffdpi YKI5_CAEEL : 407- 414: issek SrkiAde--L ktvrn YKI5_CAEEL : 580- 589: ridaq StpsAvvsaL ptpmn YKI5_CAEEL : 922- 929: cgshp Ske-Akda-L agrvy YOT2_CAEEL : 60- 66: keski Svq-Apa--L hyevp T 20: 11.0102 30( 14) S-x(3,5)-A-x(2,3)-L Occurences: 30(14) CDS1_SCHPO : 175- 183: irtlg Sgtf--AvvkL avevn CDS1_SCHPO : 446- 456: hrtpp SsseheAteqL nsss CDS1_SCHPO : 447- 456: rtpps Ssehe-AteqL nsss CDS1_SCHPO : 448- 456: tppss Sehe--AteqL nsss DUN1_YEAST : 74- 82: sepdi Stfh--AefhL lqmdv FHL1_YEAST : 264- 273: tqrkl Sepid-AslpL pneqp FHL1_YEAST : 638- 646: drkgl Skqvi-Aai-L tqala FKH1_YEAST : 446- 455: lqats SilgesApq-L qrtql FKH2_YEAST : 664- 671: tgttt Ssla--Ans-L rlsqp FKH2_YEAST : 702- 710: tperg Sanr--ArspL hsnsn FKH2_YEAST : 841- 848: knqgg Stan--Ake-L ildtd FRAH_ANASP : 229- 237: nseiv Srvh--AdirL egdah KAPP_ARATH : 381- 389: kekvl Skrd--AsdvL rdmfa KAPP_ARATH : 529- 536: lwdvv Spkk--Avq-L vlqmr KAPP_ARATH : 549- 558: ergre SsaekiAng-L lnear KAPP_ARATH : 549- 559: ergre SsaekiAnglL neara KAPP_ARATH : 550- 558: rgres Saeki-Ang-L lnear KAPP_ARATH : 550- 559: rgres Saeki-AnglL neara KI67_HUMAN : 330- 339: svqtp Skavg-AsfpL yepak KI67_HUMAN : 821- 830: aakqp Sdkcs-AsppL rrqci KI67_HUMAN : 3173- 3182: kvaee SggqksAkv-L mqnqk KI67_HUMAN : 3207- 3214: srktk Sqpa--Ast-L esksv MEK1_YEAST : 350- 357: rkayq Sfsr--Aat-L eqrgy MNF_MOUSE : 8- 16: evged Sgar--AllaL rsapc MNF_MOUSE : 594- 601: tagyt Sdyr--Aap-L pvrav SPK1_YEAST : 635- 644: havgk SmyespAqg-L ddiwy YHR5_YEAST : 165- 174: pfidt Sstsv-AnqgL ffdpi YHR5_YEAST : 166- 174: fidts Stsv--AnqgL ffdpi YKI5_CAEEL : 144- 153: fcvem StagepAyq-L veqir YKI5_CAEEL : 407- 414: issek Srki--Ade-L ktvrn YKI5_CAEEL : 919- 929: flccg ShpskeAkdaL agrvy YOT2_CAEEL : 57- 66: qaeke SkisvqApa-L hyevp Number of patterns evaluated by Pratt:3603 Total running time: 9 seconds