------------------------------------------------------------ Pratt version 2.1, Sept. 1996 Written by Inge Jonassen, University of Bergen Norway email: inge@ii.uib.no For more information, see http://www.ii.uib.no/~inge/Pratt.html ------------------------------------------------------------ Please quote: I.Jonassen, J.F.Collins, D.G.Higgins. Protein Science 1995;4(8):1587-1595. ------------------------------------------------------------ Pratt version 2.1 Analysing 17 sequences from file ENDOTHELIN PATTERN CONSERVATION: CM: min Nr of Seqs to Match 17 C%: min Percentage Seqs to Match 100.0 PATTERN RESTRICTIONS : PP: pos in seq [off,complete,start] off PL: max Pattern Length 50 PN: max Nr of Pattern Symbols 50 PX: max Nr of consecutive x's 5 FN: max Nr of flexible spacers 2 FL: max Flexibility 2 FP: max Flex.Product 10 BI: Input Pattern Symbol File off BN: Nr of Pattern Symbols Initial Search 20 PATTERN SCORING: S: Scoring [info,mdl,tree,dist,ppv] info SEARCH PARAMETERS: G: Pattern Graph from [seq,al,query] seq E: Search Greediness 3 R: Pattern Refinement on RG: Generalise ambiguous symbols off OUTPUT: OF: Output Filename ENDOTHELIN.pratt2 OP: PROSITE Pattern Format on ON: max number patterns 20 OA: max number Alignments 20 M: Print Patterns in sequences off Sequence lengths: BTX_ATRBI 21 ET1_BOVIN 202 ET1_CANFA 56 ET1_HUMAN 212 ET1_MOUSE 51 ET1_PIG 203 ET1_RABIT 202 ET1_RAT 202 ET2_CANFA 56 ET2_HUMAN 178 ET2_MOUSE 160 ET2_RAT 51 ET3_HUMAN 238 ET3_RABIT 114 ET3_RAT 167 SRTD_ATREN 21 SRTX_ATREN 543 Pratt run started at Thu Feb 6 19:25:59 1997 Best Patterns before refinement: fitness hits(seqs) Pattern 1: 50.0406 18( 17) C-x-C-x(4)-D-K-E-C-x-Y-x-C-H-x-D-x-I-W 2: 45.8706 18( 17) C-x(4)-D-K-E-C-x-Y-x-C-H-x-D-x-I-W 3: 41.7005 18( 17) D-K-E-C-x-Y-x-C-H-x-D-x-I-W 4: 37.5305 18( 17) K-E-C-x-Y-x-C-H-x-D-x-I-W 5: 33.3604 18( 17) E-C-x-Y-x-C-H-x-D-x-I-W 6: 29.1904 18( 17) C-x-Y-x-C-H-x-D-x-I-W 7: 25.0203 18( 17) Y-x-C-H-x-D-x-I-W 8: 20.8503 27( 17) C-H-x-D-x-I-W 9: 16.6802 27( 17) H-x-D-x-I-W 10: 12.5102 27( 17) D-x-I-W 11: 8.3401 28( 17) I-W 12: 8.3401 28( 17) F-x(3)-D 13: 7.8401 33( 17) C-x(0,1)-L 14: 7.8401 43( 17) C-x(1,2)-D 15: 7.3401 39( 17) F-x(0,2)-C Best Patterns (after refinement phase): fitness hits(seqs) Pattern A 1: 65.4126 18( 17) C-[ST]-C-x-[DST]-x(2)-D-K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W B 2: 58.0671 18( 17) C-x-[DST]-x(2)-D-K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W C 3: 51.2936 18( 17) D-K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W D 4: 47.1236 18( 17) K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W E 5: 42.9535 18( 17) E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W F 6: 38.7835 18( 17) C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W G 7: 31.4297 18( 17) Y-[FY]-C-H-x-D-[IV]-I-W H 8: 24.0751 27( 17) C-H-x-D-[IV]-I-W I 9: 20.2416 27( 17) C-x(0,1)-L-x-[FI]-x-[HW]-x-[DN]-x-[AIP] J 10: 20.1732 28( 17) C-x(1,2)-D-[IM]-x(3)-[EN]-[CT]-[ALP] K 11: 19.9051 27( 17) H-x-D-[IV]-I-W L 12: 15.7350 27( 17) D-[IV]-I-W M 13: 14.7369 27( 17) F-[CT]-[HY]-x-D N 14: 8.9718 36( 17) F-x(0,2)-C-x(2)-[DGNSTV] O 15: 8.3401 28( 17) I-W Best patterns with alignements: fitness hits(seqs) Pattern A 1: 65.4126 18( 17) C-[ST]-C-x-[DST]-x(2)-D-K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 1- 21: CSCaDmtDKECLYFCHqDVIW ET1_BOVIN : 53- 73: rrskr CSCsSlmDKECVYFCHlDIIW vntpe ET1_CANFA : 31- 51: rrskr CSCsSlmDKECVYFCHlDIIW vntpe ET1_HUMAN : 53- 73: rrskr CSCsSlmDKECVYFCHlDIIW vntpe ET1_MOUSE : 27- 47: rrskr CSCsSlmDKECVYFCHlDIIW vntp ET1_PIG : 53- 73: rrskr CSCsSlmDKECVYFCHlDIIW vntpe ET1_RABIT : 53- 73: rrskr CSCsSlmDKECVYFCHlDIIW vntpg ET1_RAT : 53- 73: rrskr CSCsSlmDKECVYFCHlDIIW vntpe ET2_CANFA : 31- 51: lrprr CSCsSwlDKECVYFCHlDIIW vntpg ET2_HUMAN : 49- 69: lrlrr CSCsSwlDKECVYFCHlDIIW vntpe ET2_MOUSE : 46- 66: lrfrr CSCnSwlDKECVYFCHlDIIW vntag ET2_RAT : 27- 47: lrfrr CSCnSwlDKECVYFCHlDIIW vnta ET3_HUMAN : 97- 117: hrsrr CTCfTykDKECVYYCHlDIIW intpe ET3_RABIT : 89- 109: rrvrr CTCfTykDKECVYYCHlDIIW intpe ET3_RAT : 53- 73: hrprr CTCfTykDKECVYYCHlDIIW intpe SRTD_ATREN : 1- 21: CTCkDmtDKECLYFCHqDIIW SRTX_ATREN : 150- 170: nvepl CSCkDmtDKECLYFCHqDVIW rdtkq SRTX_ATREN : 430- 450: nvepl CSCkDmtDKECLYFCHqDVIW rdtkq B 2: 58.0671 18( 17) C-x-[DST]-x(2)-D-K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 3- 21: cs CaDmtDKECLYFCHqDVIW ET1_BOVIN : 55- 73: skrcs CsSlmDKECVYFCHlDIIW vntpe ET1_CANFA : 33- 51: skrcs CsSlmDKECVYFCHlDIIW vntpe ET1_HUMAN : 55- 73: skrcs CsSlmDKECVYFCHlDIIW vntpe ET1_MOUSE : 29- 47: skrcs CsSlmDKECVYFCHlDIIW vntp ET1_PIG : 55- 73: skrcs CsSlmDKECVYFCHlDIIW vntpe ET1_RABIT : 55- 73: skrcs CsSlmDKECVYFCHlDIIW vntpg ET1_RAT : 55- 73: skrcs CsSlmDKECVYFCHlDIIW vntpe ET2_CANFA : 33- 51: prrcs CsSwlDKECVYFCHlDIIW vntpg ET2_HUMAN : 51- 69: lrrcs CsSwlDKECVYFCHlDIIW vntpe ET2_MOUSE : 48- 66: frrcs CnSwlDKECVYFCHlDIIW vntag ET2_RAT : 29- 47: frrcs CnSwlDKECVYFCHlDIIW vnta ET3_HUMAN : 99- 117: srrct CfTykDKECVYYCHlDIIW intpe ET3_RABIT : 91- 109: vrrct CfTykDKECVYYCHlDIIW intpe ET3_RAT : 55- 73: prrct CfTykDKECVYYCHlDIIW intpe SRTD_ATREN : 3- 21: ct CkDmtDKECLYFCHqDIIW SRTX_ATREN : 152- 170: eplcs CkDmtDKECLYFCHqDVIW rdtkq SRTX_ATREN : 432- 450: eplcs CkDmtDKECLYFCHqDVIW rdtkq C 3: 51.2936 18( 17) D-K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 8- 21: cadmt DKECLYFCHqDVIW ET1_BOVIN : 60- 73: csslm DKECVYFCHlDIIW vntpe ET1_CANFA : 38- 51: csslm DKECVYFCHlDIIW vntpe ET1_HUMAN : 60- 73: csslm DKECVYFCHlDIIW vntpe ET1_MOUSE : 34- 47: csslm DKECVYFCHlDIIW vntp ET1_PIG : 60- 73: csslm DKECVYFCHlDIIW vntpe ET1_RABIT : 60- 73: csslm DKECVYFCHlDIIW vntpg ET1_RAT : 60- 73: csslm DKECVYFCHlDIIW vntpe ET2_CANFA : 38- 51: csswl DKECVYFCHlDIIW vntpg ET2_HUMAN : 56- 69: csswl DKECVYFCHlDIIW vntpe ET2_MOUSE : 53- 66: cnswl DKECVYFCHlDIIW vntag ET2_RAT : 34- 47: cnswl DKECVYFCHlDIIW vnta ET3_HUMAN : 104- 117: cftyk DKECVYYCHlDIIW intpe ET3_RABIT : 96- 109: cftyk DKECVYYCHlDIIW intpe ET3_RAT : 60- 73: cftyk DKECVYYCHlDIIW intpe SRTD_ATREN : 8- 21: ckdmt DKECLYFCHqDIIW SRTX_ATREN : 157- 170: ckdmt DKECLYFCHqDVIW rdtkq SRTX_ATREN : 437- 450: ckdmt DKECLYFCHqDVIW rdtkq D 4: 47.1236 18( 17) K-E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 9- 21: admtd KECLYFCHqDVIW ET1_BOVIN : 61- 73: sslmd KECVYFCHlDIIW vntpe ET1_CANFA : 39- 51: sslmd KECVYFCHlDIIW vntpe ET1_HUMAN : 61- 73: sslmd KECVYFCHlDIIW vntpe ET1_MOUSE : 35- 47: sslmd KECVYFCHlDIIW vntp ET1_PIG : 61- 73: sslmd KECVYFCHlDIIW vntpe ET1_RABIT : 61- 73: sslmd KECVYFCHlDIIW vntpg ET1_RAT : 61- 73: sslmd KECVYFCHlDIIW vntpe ET2_CANFA : 39- 51: sswld KECVYFCHlDIIW vntpg ET2_HUMAN : 57- 69: sswld KECVYFCHlDIIW vntpe ET2_MOUSE : 54- 66: nswld KECVYFCHlDIIW vntag ET2_RAT : 35- 47: nswld KECVYFCHlDIIW vnta ET3_HUMAN : 105- 117: ftykd KECVYYCHlDIIW intpe ET3_RABIT : 97- 109: ftykd KECVYYCHlDIIW intpe ET3_RAT : 61- 73: ftykd KECVYYCHlDIIW intpe SRTD_ATREN : 9- 21: kdmtd KECLYFCHqDIIW SRTX_ATREN : 158- 170: kdmtd KECLYFCHqDVIW rdtkq SRTX_ATREN : 438- 450: kdmtd KECLYFCHqDVIW rdtkq E 5: 42.9535 18( 17) E-C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 10- 21: dmtdk ECLYFCHqDVIW ET1_BOVIN : 62- 73: slmdk ECVYFCHlDIIW vntpe ET1_CANFA : 40- 51: slmdk ECVYFCHlDIIW vntpe ET1_HUMAN : 62- 73: slmdk ECVYFCHlDIIW vntpe ET1_MOUSE : 36- 47: slmdk ECVYFCHlDIIW vntp ET1_PIG : 62- 73: slmdk ECVYFCHlDIIW vntpe ET1_RABIT : 62- 73: slmdk ECVYFCHlDIIW vntpg ET1_RAT : 62- 73: slmdk ECVYFCHlDIIW vntpe ET2_CANFA : 40- 51: swldk ECVYFCHlDIIW vntpg ET2_HUMAN : 58- 69: swldk ECVYFCHlDIIW vntpe ET2_MOUSE : 55- 66: swldk ECVYFCHlDIIW vntag ET2_RAT : 36- 47: swldk ECVYFCHlDIIW vnta ET3_HUMAN : 106- 117: tykdk ECVYYCHlDIIW intpe ET3_RABIT : 98- 109: tykdk ECVYYCHlDIIW intpe ET3_RAT : 62- 73: tykdk ECVYYCHlDIIW intpe SRTD_ATREN : 10- 21: dmtdk ECLYFCHqDIIW SRTX_ATREN : 159- 170: dmtdk ECLYFCHqDVIW rdtkq SRTX_ATREN : 439- 450: dmtdk ECLYFCHqDVIW rdtkq F 6: 38.7835 18( 17) C-[LV]-Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 11- 21: mtdke CLYFCHqDVIW ET1_BOVIN : 63- 73: lmdke CVYFCHlDIIW vntpe ET1_CANFA : 41- 51: lmdke CVYFCHlDIIW vntpe ET1_HUMAN : 63- 73: lmdke CVYFCHlDIIW vntpe ET1_MOUSE : 37- 47: lmdke CVYFCHlDIIW vntp ET1_PIG : 63- 73: lmdke CVYFCHlDIIW vntpe ET1_RABIT : 63- 73: lmdke CVYFCHlDIIW vntpg ET1_RAT : 63- 73: lmdke CVYFCHlDIIW vntpe ET2_CANFA : 41- 51: wldke CVYFCHlDIIW vntpg ET2_HUMAN : 59- 69: wldke CVYFCHlDIIW vntpe ET2_MOUSE : 56- 66: wldke CVYFCHlDIIW vntag ET2_RAT : 37- 47: wldke CVYFCHlDIIW vnta ET3_HUMAN : 107- 117: ykdke CVYYCHlDIIW intpe ET3_RABIT : 99- 109: ykdke CVYYCHlDIIW intpe ET3_RAT : 63- 73: ykdke CVYYCHlDIIW intpe SRTD_ATREN : 11- 21: mtdke CLYFCHqDIIW SRTX_ATREN : 160- 170: mtdke CLYFCHqDVIW rdtkq SRTX_ATREN : 440- 450: mtdke CLYFCHqDVIW rdtkq G 7: 31.4297 18( 17) Y-[FY]-C-H-x-D-[IV]-I-W Occurences: 18(17) BTX_ATRBI : 13- 21: dkecl YFCHqDVIW ET1_BOVIN : 65- 73: dkecv YFCHlDIIW vntpe ET1_CANFA : 43- 51: dkecv YFCHlDIIW vntpe ET1_HUMAN : 65- 73: dkecv YFCHlDIIW vntpe ET1_MOUSE : 39- 47: dkecv YFCHlDIIW vntp ET1_PIG : 65- 73: dkecv YFCHlDIIW vntpe ET1_RABIT : 65- 73: dkecv YFCHlDIIW vntpg ET1_RAT : 65- 73: dkecv YFCHlDIIW vntpe ET2_CANFA : 43- 51: dkecv YFCHlDIIW vntpg ET2_HUMAN : 61- 69: dkecv YFCHlDIIW vntpe ET2_MOUSE : 58- 66: dkecv YFCHlDIIW vntag ET2_RAT : 39- 47: dkecv YFCHlDIIW vnta ET3_HUMAN : 109- 117: dkecv YYCHlDIIW intpe ET3_RABIT : 101- 109: dkecv YYCHlDIIW intpe ET3_RAT : 65- 73: dkecv YYCHlDIIW intpe SRTD_ATREN : 13- 21: dkecl YFCHqDIIW SRTX_ATREN : 162- 170: dkecl YFCHqDVIW rdtkq SRTX_ATREN : 442- 450: dkecl YFCHqDVIW rdtkq H 8: 24.0751 27( 17) C-H-x-D-[IV]-I-W Occurences: 27(17) BTX_ATRBI : 15- 21: eclyf CHqDVIW ET1_BOVIN : 67- 73: ecvyf CHlDIIW vntpe ET1_CANFA : 45- 51: ecvyf CHlDIIW vntpe ET1_HUMAN : 67- 73: ecvyf CHlDIIW vntpe ET1_MOUSE : 41- 47: ecvyf CHlDIIW vntp ET1_PIG : 67- 73: ecvyf CHlDIIW vntpe ET1_RABIT : 67- 73: ecvyf CHlDIIW vntpg ET1_RAT : 67- 73: ecvyf CHlDIIW vntpe ET2_CANFA : 45- 51: ecvyf CHlDIIW vntpg ET2_HUMAN : 63- 69: ecvyf CHlDIIW vntpe ET2_MOUSE : 60- 66: ecvyf CHlDIIW vntag ET2_RAT : 41- 47: ecvyf CHlDIIW vnta ET3_HUMAN : 111- 117: ecvyy CHlDIIW intpe ET3_RABIT : 103- 109: ecvyy CHlDIIW intpe ET3_RAT : 67- 73: ecvyy CHlDIIW intpe SRTD_ATREN : 15- 21: eclyf CHqDIIW SRTX_ATREN : 84- 90: eclnf CHqDVIW rdtkq SRTX_ATREN : 124- 130: eclnf CHqDVIW rdtkq SRTX_ATREN : 164- 170: eclyf CHqDVIW rdtkq SRTX_ATREN : 204- 210: eclnf CHqDVIW rdtkq SRTX_ATREN : 244- 250: eclnf CHqDVIW rdtkq SRTX_ATREN : 324- 330: eclnf CHqDVIW rdtkq SRTX_ATREN : 364- 370: eclnf CHqDVIW rdtkq SRTX_ATREN : 404- 410: eclnf CHqDVIW rdtkq SRTX_ATREN : 444- 450: eclyf CHqDVIW rdtkq SRTX_ATREN : 484- 490: eclnf CHqDVIW rdtkq SRTX_ATREN : 524- 530: eclnf CHqDVIW knadt I 9: 20.2416 27( 17) C-x(0,1)-L-x-[FI]-x-[HW]-x-[DN]-x-[AIP] Occurences: 27(17) BTX_ATRBI : 11- 20: mtdke C-LyFcHqDvI w ET1_BOVIN : 67- 77: ecvyf ChLdIiWvNtP ehvvp ET1_CANFA : 45- 55: ecvyf ChLdIiWvNtP e ET1_HUMAN : 67- 77: ecvyf ChLdIiWvNtP ehvvp ET1_MOUSE : 41- 51: ecvyf ChLdIiWvNtP ET1_PIG : 67- 77: ecvyf ChLdIiWvNtP ehivp ET1_RABIT : 67- 77: ecvyf ChLdIiWvNtP ghivp ET1_RAT : 67- 77: ecvyf ChLdIiWvNtP ervvp ET2_CANFA : 45- 55: ecvyf ChLdIiWvNtP g ET2_HUMAN : 63- 73: ecvyf ChLdIiWvNtP eqtap ET2_MOUSE : 60- 70: ecvyf ChLdIiWvNtA gqtap ET2_RAT : 41- 51: ecvyf ChLdIiWvNtA ET3_HUMAN : 111- 121: ecvyy ChLdIiWiNtP eqtvp ET3_RABIT : 103- 113: ecvyy ChLdIiWiNtP e ET3_RAT : 67- 77: ecvyy ChLdIiWiNtP eqtvp SRTD_ATREN : 11- 20: mtdke C-LyFcHqDiI w SRTX_ATREN : 80- 89: msdke C-LnFcHqDvI wrdtk SRTX_ATREN : 120- 129: mtdee C-LnFcHqDvI wrdtk SRTX_ATREN : 160- 169: mtdke C-LyFcHqDvI wrdtk SRTX_ATREN : 200- 209: mtdee C-LnFcHqDvI wrdtk SRTX_ATREN : 240- 249: mtdee C-LnFcHqDvI wrdtk SRTX_ATREN : 320- 329: msdke C-LnFcHqDvI wrdtk SRTX_ATREN : 360- 369: mtdee C-LnFcHqDvI wrdtk SRTX_ATREN : 400- 409: mtdee C-LnFcHqDvI wrdtk SRTX_ATREN : 440- 449: mtdke C-LyFcHqDvI wrdtk SRTX_ATREN : 480- 489: msdke C-LnFcHqDvI wrdtk SRTX_ATREN : 520- 529: mtdke C-LnFcHqDvI wknad J 10: 20.1732 28( 17) C-x(1,2)-D-[IM]-x(3)-[EN]-[CT]-[ALP] Occurences: 28(17) BTX_ATRBI : 3- 12: cs Ca-DMtdkECL yfchq ET1_BOVIN : 67- 77: ecvyf ChlDIiwvNTP ehvvp ET1_CANFA : 45- 55: ecvyf ChlDIiwvNTP e ET1_HUMAN : 67- 77: ecvyf ChlDIiwvNTP ehvvp ET1_MOUSE : 41- 51: ecvyf ChlDIiwvNTP ET1_PIG : 67- 77: ecvyf ChlDIiwvNTP ehivp ET1_RABIT : 67- 77: ecvyf ChlDIiwvNTP ghivp ET1_RAT : 67- 77: ecvyf ChlDIiwvNTP ervvp ET2_CANFA : 45- 55: ecvyf ChlDIiwvNTP g ET2_HUMAN : 63- 73: ecvyf ChlDIiwvNTP eqtap ET2_MOUSE : 60- 70: ecvyf ChlDIiwvNTA gqtap ET2_RAT : 41- 51: ecvyf ChlDIiwvNTA ET3_HUMAN : 111- 121: ecvyy ChlDIiwiNTP eqtvp ET3_RABIT : 103- 113: ecvyy ChlDIiwiNTP e ET3_RAT : 67- 77: ecvyy ChlDIiwiNTP eqtvp SRTD_ATREN : 3- 12: ct Ck-DMtdkECL yfchq SRTX_ATREN : 72- 81: eplcs Ck-DMsdkECL nfchq SRTX_ATREN : 112- 121: eplct Cn-DMtdeECL nfchq SRTX_ATREN : 152- 161: eplcs Ck-DMtdkECL yfchq SRTX_ATREN : 192- 201: eplct Cn-DMtdeECL nfchq SRTX_ATREN : 232- 241: eplct Cn-DMtdeECL nfchq SRTX_ATREN : 272- 281: eplct Ck-DMtdkECL yfchq SRTX_ATREN : 312- 321: eplcs Ck-DMsdkECL nfchq SRTX_ATREN : 352- 361: eplct Cn-DMtdeECL nfchq SRTX_ATREN : 392- 401: eplct Cn-DMtdeECL nfchq SRTX_ATREN : 432- 441: eplcs Ck-DMtdkECL yfchq SRTX_ATREN : 472- 481: eplcs Ck-DMsdkECL nfchq SRTX_ATREN : 512- 521: eplcs Ck-DMtdkECL nfchq K 11: 19.9051 27( 17) H-x-D-[IV]-I-W Occurences: 27(17) BTX_ATRBI : 16- 21: clyfc HqDVIW ET1_BOVIN : 68- 73: cvyfc HlDIIW vntpe ET1_CANFA : 46- 51: cvyfc HlDIIW vntpe ET1_HUMAN : 68- 73: cvyfc HlDIIW vntpe ET1_MOUSE : 42- 47: cvyfc HlDIIW vntp ET1_PIG : 68- 73: cvyfc HlDIIW vntpe ET1_RABIT : 68- 73: cvyfc HlDIIW vntpg ET1_RAT : 68- 73: cvyfc HlDIIW vntpe ET2_CANFA : 46- 51: cvyfc HlDIIW vntpg ET2_HUMAN : 64- 69: cvyfc HlDIIW vntpe ET2_MOUSE : 61- 66: cvyfc HlDIIW vntag ET2_RAT : 42- 47: cvyfc HlDIIW vnta ET3_HUMAN : 112- 117: cvyyc HlDIIW intpe ET3_RABIT : 104- 109: cvyyc HlDIIW intpe ET3_RAT : 68- 73: cvyyc HlDIIW intpe SRTD_ATREN : 16- 21: clyfc HqDIIW SRTX_ATREN : 85- 90: clnfc HqDVIW rdtkq SRTX_ATREN : 125- 130: clnfc HqDVIW rdtkq SRTX_ATREN : 165- 170: clyfc HqDVIW rdtkq SRTX_ATREN : 205- 210: clnfc HqDVIW rdtkq SRTX_ATREN : 245- 250: clnfc HqDVIW rdtkq SRTX_ATREN : 325- 330: clnfc HqDVIW rdtkq SRTX_ATREN : 365- 370: clnfc HqDVIW rdtkq SRTX_ATREN : 405- 410: clnfc HqDVIW rdtkq SRTX_ATREN : 445- 450: clyfc HqDVIW rdtkq SRTX_ATREN : 485- 490: clnfc HqDVIW rdtkq SRTX_ATREN : 525- 530: clnfc HqDVIW knadt L 12: 15.7350 27( 17) D-[IV]-I-W Occurences: 27(17) BTX_ATRBI : 18- 21: yfchq DVIW ET1_BOVIN : 70- 73: yfchl DIIW vntpe ET1_CANFA : 48- 51: yfchl DIIW vntpe ET1_HUMAN : 70- 73: yfchl DIIW vntpe ET1_MOUSE : 44- 47: yfchl DIIW vntp ET1_PIG : 70- 73: yfchl DIIW vntpe ET1_RABIT : 70- 73: yfchl DIIW vntpg ET1_RAT : 70- 73: yfchl DIIW vntpe ET2_CANFA : 48- 51: yfchl DIIW vntpg ET2_HUMAN : 66- 69: yfchl DIIW vntpe ET2_MOUSE : 63- 66: yfchl DIIW vntag ET2_RAT : 44- 47: yfchl DIIW vnta ET3_HUMAN : 114- 117: yychl DIIW intpe ET3_RABIT : 106- 109: yychl DIIW intpe ET3_RAT : 70- 73: yychl DIIW intpe SRTD_ATREN : 18- 21: yfchq DIIW SRTX_ATREN : 87- 90: nfchq DVIW rdtkq SRTX_ATREN : 127- 130: nfchq DVIW rdtkq SRTX_ATREN : 167- 170: yfchq DVIW rdtkq SRTX_ATREN : 207- 210: nfchq DVIW rdtkq SRTX_ATREN : 247- 250: nfchq DVIW rdtkq SRTX_ATREN : 327- 330: nfchq DVIW rdtkq SRTX_ATREN : 367- 370: nfchq DVIW rdtkq SRTX_ATREN : 407- 410: nfchq DVIW rdtkq SRTX_ATREN : 447- 450: yfchq DVIW rdtkq SRTX_ATREN : 487- 490: nfchq DVIW rdtkq SRTX_ATREN : 527- 530: nfchq DVIW knadt M 13: 14.7369 27( 17) F-[CT]-[HY]-x-D Occurences: 27(17) BTX_ATRBI : 14- 18: kecly FCHqD viw ET1_BOVIN : 66- 70: kecvy FCHlD iiwvn ET1_CANFA : 44- 48: kecvy FCHlD iiwvn ET1_HUMAN : 66- 70: kecvy FCHlD iiwvn ET1_MOUSE : 40- 44: kecvy FCHlD iiwvn ET1_PIG : 66- 70: kecvy FCHlD iiwvn ET1_RABIT : 66- 70: kecvy FCHlD iiwvn ET1_RAT : 66- 70: kecvy FCHlD iiwvn ET2_CANFA : 44- 48: kecvy FCHlD iiwvn ET2_HUMAN : 62- 66: kecvy FCHlD iiwvn ET2_MOUSE : 59- 63: kecvy FCHlD iiwvn ET2_RAT : 40- 44: kecvy FCHlD iiwvn ET3_HUMAN : 100- 104: rrctc FTYkD kecvy ET3_RABIT : 92- 96: rrctc FTYkD kecvy ET3_RAT : 56- 60: rrctc FTYkD kecvy SRTD_ATREN : 14- 18: kecly FCHqD iiw SRTX_ATREN : 83- 87: kecln FCHqD viwrd SRTX_ATREN : 123- 127: eecln FCHqD viwrd SRTX_ATREN : 163- 167: kecly FCHqD viwrd SRTX_ATREN : 203- 207: eecln FCHqD viwrd SRTX_ATREN : 243- 247: eecln FCHqD viwrd SRTX_ATREN : 323- 327: kecln FCHqD viwrd SRTX_ATREN : 363- 367: eecln FCHqD viwrd SRTX_ATREN : 403- 407: eecln FCHqD viwrd SRTX_ATREN : 443- 447: kecly FCHqD viwrd SRTX_ATREN : 483- 487: kecln FCHqD viwrd SRTX_ATREN : 523- 527: kecln FCHqD viwkn N 14: 8.9718 36( 17) F-x(0,2)-C-x(2)-[DGNSTV] Occurences: 36(17) BTX_ATRBI : 14- 18: kecly F--ChqD viw ET1_BOVIN : 66- 70: kecvy F--ChlD iiwvn ET1_BOVIN : 123- 127: kkcwn F--CqaG kelrd ET1_CANFA : 44- 48: kecvy F--ChlD iiwvn ET1_HUMAN : 66- 70: kecvy F--ChlD iiwvn ET1_HUMAN : 122- 126: kkcwn F--CqaG kelra ET1_MOUSE : 40- 44: kecvy F--ChlD iiwvn ET1_PIG : 66- 70: kecvy F--ChlD iiwvn ET1_PIG : 123- 127: kkcws F--CqaG keigr ET1_RABIT : 66- 70: kecvy F--ChlD iiwvn ET1_RABIT : 123- 127: kkcwn F--CqaG telra ET1_RAT : 66- 70: kecvy F--ChlD iiwvn ET1_RAT : 123- 127: kkcwn F--CqaD kelra ET2_CANFA : 44- 48: kecvy F--ChlD iiwvn ET2_HUMAN : 62- 66: kecvy F--ChlD iiwvn ET2_MOUSE : 43- 49: gphlr FrrCscN swldk ET2_MOUSE : 59- 63: kecvy F--ChlD iiwvn ET2_RAT : 24- 30: gphlr FrrCscN swldk ET2_RAT : 40- 44: kecvy F--ChlD iiwvn ET3_HUMAN : 19- 25: tsaag FvpCsqS gdagr ET3_HUMAN : 172- 176: kaclh F--CtqT ldvss ET3_RABIT : 19- 25: taaag FvpCpqT ggagr ET3_RAT : 128- 132: kacay F--CahV tsysr SRTD_ATREN : 14- 18: kecly F--ChqD iiw SRTX_ATREN : 83- 87: kecln F--ChqD viwrd SRTX_ATREN : 123- 127: eecln F--ChqD viwrd SRTX_ATREN : 163- 167: kecly F--ChqD viwrd SRTX_ATREN : 203- 207: eecln F--ChqD viwrd SRTX_ATREN : 243- 247: eecln F--ChqD viwrd SRTX_ATREN : 283- 287: kecly F--ChqG iiwrd SRTX_ATREN : 323- 327: kecln F--ChqD viwrd SRTX_ATREN : 363- 367: eecln F--ChqD viwrd SRTX_ATREN : 403- 407: eecln F--ChqD viwrd SRTX_ATREN : 443- 447: kecly F--ChqD viwrd SRTX_ATREN : 483- 487: kecln F--ChqD viwrd SRTX_ATREN : 523- 527: kecln F--ChqD viwkn O 15: 8.3401 28( 17) I-W Occurences: 28(17) BTX_ATRBI : 20- 21: chqdv IW ET1_BOVIN : 72- 73: chldi IW vntpe ET1_CANFA : 50- 51: chldi IW vntpe ET1_HUMAN : 72- 73: chldi IW vntpe ET1_MOUSE : 46- 47: chldi IW vntp ET1_PIG : 72- 73: chldi IW vntpe ET1_RABIT : 72- 73: chldi IW vntpg ET1_RAT : 72- 73: chldi IW vntpe ET2_CANFA : 50- 51: chldi IW vntpg ET2_HUMAN : 68- 69: chldi IW vntpe ET2_MOUSE : 65- 66: chldi IW vntag ET2_RAT : 46- 47: chldi IW vnta ET3_HUMAN : 116- 117: chldi IW intpe ET3_RABIT : 108- 109: chldi IW intpe ET3_RAT : 72- 73: chldi IW intpe SRTD_ATREN : 20- 21: chqdi IW SRTX_ATREN : 89- 90: chqdv IW rdtkq SRTX_ATREN : 129- 130: chqdv IW rdtkq SRTX_ATREN : 169- 170: chqdv IW rdtkq SRTX_ATREN : 209- 210: chqdv IW rdtkq SRTX_ATREN : 249- 250: chqdv IW rdtkq SRTX_ATREN : 289- 290: chqgi IW rdtkq SRTX_ATREN : 329- 330: chqdv IW rdtkq SRTX_ATREN : 369- 370: chqdv IW rdtkq SRTX_ATREN : 409- 410: chqdv IW rdtkq SRTX_ATREN : 449- 450: chqdv IW rdtkq SRTX_ATREN : 489- 490: chqdv IW rdtkq SRTX_ATREN : 529- 530: chqdv IW knadt Number of patterns evaluated by Pratt:71 Total running time: 1 seconds